HEADER HYDROLASE 24-OCT-17 5YN4 TITLE CRYSTAL STRUCTURE OF DIMERIC PEPTIDYL TRNA HYDROLASE FROM TITLE 2 ACINETOBACTER BAUMANNII WITH OCCLUDED SUBSTRATE BINDING SITE AT 1.47 TITLE 3 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-TRNA HYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PTH; COMPND 5 EC: 3.1.1.29; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII (STRAIN ATCC 19606 / SOURCE 3 DSM 30007 / CIP 70.34 / JCM 6841 / NBRC 109757 / NCIMB 12457 / NCTC SOURCE 4 12156 / 81); SOURCE 5 ORGANISM_TAXID: 575584; SOURCE 6 STRAIN: ATCC 19606 / DSM 30007 / CIP 70.34 / JCM 6841 / NBRC 109757 SOURCE 7 / NCIMB 12457 / NCTC 12156 / 81; SOURCE 8 GENE: PTH, F911_03144, HMPREF0010_01329; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.K.SINGH,P.SHARMA,P.KAUR,S.SHARMA,T.P.SINGH REVDAT 2 22-NOV-23 5YN4 1 REMARK REVDAT 1 15-NOV-17 5YN4 0 JRNL AUTH P.K.SINGH,P.SHARMA,P.KAUR,S.SHARMA,T.P.SINGH JRNL TITL CRYSTAL STRUCTURE OF DIMERIC PEPTIDYL TRNA HYDROLASE FROM JRNL TITL 2 ACINETOBACTER BAUMANNII WITH OCCLUDED SUBSTRATE BINDING SITE JRNL TITL 3 AT 1.47 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 79.6 REMARK 3 NUMBER OF REFLECTIONS : 55852 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.600 REMARK 3 FREE R VALUE TEST SET COUNT : 2101 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.47 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1477 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 28.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.4300 REMARK 3 BIN FREE R VALUE SET COUNT : 56 REMARK 3 BIN FREE R VALUE : 0.4250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2952 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 505 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : 0.32000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.079 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.080 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.852 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3031 ; 0.020 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2804 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4096 ; 1.892 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6528 ; 1.209 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 384 ; 5.770 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 138 ;37.126 ;24.058 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 508 ;14.099 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;15.117 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 432 ; 0.123 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3426 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 588 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1543 ; 2.034 ; 1.595 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1542 ; 2.032 ; 1.592 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1926 ; 2.951 ; 2.373 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1927 ; 2.953 ; 2.375 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1488 ; 3.519 ; 2.025 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1488 ; 3.518 ; 2.025 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2170 ; 5.323 ; 2.847 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3552 ;10.995 ;22.269 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3384 ; 9.008 ;20.729 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 193 B 1 193 12278 0.08 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5YN4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1300005575. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.966 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55852 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.470 REMARK 200 RESOLUTION RANGE LOW (A) : 45.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.13600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.60500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5Y98 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM HEPES, PH 7.5, PEG 1500, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.27800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.90600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.04000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.90600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.27800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.04000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 228 O HOH B 280 1.70 REMARK 500 NH1 ARG A 52 O HOH A 201 1.89 REMARK 500 O HOH A 214 O HOH A 218 2.01 REMARK 500 O HOH B 413 O HOH B 417 2.11 REMARK 500 O HOH A 334 O HOH A 346 2.11 REMARK 500 O HOH A 308 O HOH A 422 2.12 REMARK 500 O HOH B 386 O HOH B 410 2.13 REMARK 500 O HOH B 218 O HOH B 428 2.15 REMARK 500 O HOH A 279 O HOH A 357 2.15 REMARK 500 NE2 GLN A 177 O HOH A 202 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 16 CD GLU B 16 OE2 0.069 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 61 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 MET A 66 CG - SD - CE ANGL. DEV. = 10.0 DEGREES REMARK 500 ARG B 21 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 21 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 PHE B 26 CB - CG - CD1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG B 61 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 MET B 66 CG - SD - CE ANGL. DEV. = 12.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 68 154.54 79.52 REMARK 500 ASN A 128 37.60 -85.40 REMARK 500 TYR B 68 154.74 80.21 REMARK 500 ASN B 128 33.07 -81.86 REMARK 500 GLN B 179 65.42 -107.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 458 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B 446 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH B 447 DISTANCE = 7.04 ANGSTROMS DBREF 5YN4 A 1 193 UNP D0C9L6 D0C9L6_ACIB2 1 193 DBREF 5YN4 B 1 193 UNP D0C9L6 D0C9L6_ACIB2 1 193 SEQRES 1 A 193 MET SER ASN ILE SER LEU ILE VAL GLY LEU GLY ASN PRO SEQRES 2 A 193 GLY SER GLU TYR ALA GLN THR ARG HIS ASN ALA GLY PHE SEQRES 3 A 193 TRP PHE VAL GLU GLN LEU ALA ASP LYS TYR GLY ILE THR SEQRES 4 A 193 LEU LYS ASN ASP PRO LYS PHE HIS GLY ILE SER GLY ARG SEQRES 5 A 193 GLY ASN ILE GLU GLY HIS ASP VAL ARG LEU LEU LEU PRO SEQRES 6 A 193 MET THR TYR MET ASN ARG SER GLY GLN SER VAL VAL PRO SEQRES 7 A 193 PHE SER LYS PHE TYR GLN ILE ALA PRO GLU ALA ILE LEU SEQRES 8 A 193 ILE ALA HIS ASP GLU LEU ASP MET ASN PRO GLY VAL ILE SEQRES 9 A 193 ARG LEU LYS THR GLY GLY GLY HIS GLY GLY HIS ASN GLY SEQRES 10 A 193 LEU ARG ASP ILE VAL PRO HIS ILE GLY PRO ASN PHE HIS SEQRES 11 A 193 ARG LEU ARG ILE GLY ILE GLY HIS PRO GLY SER LYS GLU SEQRES 12 A 193 ARG VAL SER GLY HIS VAL LEU GLY LYS ALA PRO SER ASN SEQRES 13 A 193 GLU GLN SER LEU MET ASP GLY ALA ILE ASP HIS ALA LEU SEQRES 14 A 193 SER LYS VAL LYS LEU LEU VAL GLN GLY GLN VAL PRO GLN SEQRES 15 A 193 ALA MET ASN GLN ILE ASN ALA TYR LYS PRO ALA SEQRES 1 B 193 MET SER ASN ILE SER LEU ILE VAL GLY LEU GLY ASN PRO SEQRES 2 B 193 GLY SER GLU TYR ALA GLN THR ARG HIS ASN ALA GLY PHE SEQRES 3 B 193 TRP PHE VAL GLU GLN LEU ALA ASP LYS TYR GLY ILE THR SEQRES 4 B 193 LEU LYS ASN ASP PRO LYS PHE HIS GLY ILE SER GLY ARG SEQRES 5 B 193 GLY ASN ILE GLU GLY HIS ASP VAL ARG LEU LEU LEU PRO SEQRES 6 B 193 MET THR TYR MET ASN ARG SER GLY GLN SER VAL VAL PRO SEQRES 7 B 193 PHE SER LYS PHE TYR GLN ILE ALA PRO GLU ALA ILE LEU SEQRES 8 B 193 ILE ALA HIS ASP GLU LEU ASP MET ASN PRO GLY VAL ILE SEQRES 9 B 193 ARG LEU LYS THR GLY GLY GLY HIS GLY GLY HIS ASN GLY SEQRES 10 B 193 LEU ARG ASP ILE VAL PRO HIS ILE GLY PRO ASN PHE HIS SEQRES 11 B 193 ARG LEU ARG ILE GLY ILE GLY HIS PRO GLY SER LYS GLU SEQRES 12 B 193 ARG VAL SER GLY HIS VAL LEU GLY LYS ALA PRO SER ASN SEQRES 13 B 193 GLU GLN SER LEU MET ASP GLY ALA ILE ASP HIS ALA LEU SEQRES 14 B 193 SER LYS VAL LYS LEU LEU VAL GLN GLY GLN VAL PRO GLN SEQRES 15 B 193 ALA MET ASN GLN ILE ASN ALA TYR LYS PRO ALA FORMUL 3 HOH *505(H2 O) HELIX 1 AA1 THR A 20 HIS A 22 5 3 HELIX 2 AA2 ASN A 23 TYR A 36 1 14 HELIX 3 AA3 PRO A 44 PHE A 46 5 3 HELIX 4 AA4 TYR A 68 ARG A 71 5 4 HELIX 5 AA5 SER A 72 TYR A 83 1 12 HELIX 6 AA6 ALA A 86 GLU A 88 5 3 HELIX 7 AA7 HIS A 115 ASP A 120 1 6 HELIX 8 AA8 ILE A 121 GLY A 126 1 6 HELIX 9 AA9 SER A 141 GLU A 143 5 3 HELIX 10 AB1 ARG A 144 LEU A 150 1 7 HELIX 11 AB2 PRO A 154 SER A 170 1 17 HELIX 12 AB3 LYS A 171 GLN A 177 1 7 HELIX 13 AB4 GLN A 179 ALA A 189 1 11 HELIX 14 AB5 THR B 20 HIS B 22 5 3 HELIX 15 AB6 ASN B 23 GLY B 37 1 15 HELIX 16 AB7 PRO B 44 PHE B 46 5 3 HELIX 17 AB8 TYR B 68 ARG B 71 5 4 HELIX 18 AB9 SER B 72 TYR B 83 1 12 HELIX 19 AC1 ALA B 86 GLU B 88 5 3 HELIX 20 AC2 HIS B 115 ASP B 120 1 6 HELIX 21 AC3 ILE B 121 GLY B 126 1 6 HELIX 22 AC4 SER B 141 GLU B 143 5 3 HELIX 23 AC5 ARG B 144 LEU B 150 1 7 HELIX 24 AC6 PRO B 154 SER B 170 1 17 HELIX 25 AC7 LYS B 171 GLN B 177 1 7 HELIX 26 AC8 GLN B 179 ALA B 189 1 11 SHEET 1 AA1 7 LYS A 41 ASP A 43 0 SHEET 2 AA1 7 GLY A 48 ILE A 55 -1 O GLY A 48 N ASP A 43 SHEET 3 AA1 7 HIS A 58 PRO A 65 -1 O LEU A 64 N ILE A 49 SHEET 4 AA1 7 LEU A 6 GLY A 9 1 N GLY A 9 O LEU A 63 SHEET 5 AA1 7 ILE A 90 GLU A 96 1 O LEU A 91 N VAL A 8 SHEET 6 AA1 7 HIS A 130 GLY A 135 1 O ILE A 134 N HIS A 94 SHEET 7 AA1 7 ILE A 104 THR A 108 -1 N ARG A 105 O ARG A 133 SHEET 1 AA2 7 LYS B 41 ASP B 43 0 SHEET 2 AA2 7 GLY B 48 ILE B 55 -1 O GLY B 48 N ASP B 43 SHEET 3 AA2 7 HIS B 58 PRO B 65 -1 O LEU B 64 N ILE B 49 SHEET 4 AA2 7 LEU B 6 GLY B 9 1 N GLY B 9 O LEU B 63 SHEET 5 AA2 7 ILE B 90 GLU B 96 1 O ALA B 93 N VAL B 8 SHEET 6 AA2 7 HIS B 130 GLY B 135 1 O ILE B 134 N HIS B 94 SHEET 7 AA2 7 ILE B 104 THR B 108 -1 N ARG B 105 O ARG B 133 CRYST1 34.556 98.080 123.812 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028939 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010196 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008077 0.00000