HEADER PROTEIN BINDING 05-NOV-17 5YQ4 TITLE CRYSTAL STRUCTURE OF KELCH DOMAIN OF KLHL20 COMPND MOL_ID: 1; COMPND 2 MOLECULE: KELCH-LIKE PROTEIN 20; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KELCH DOMAIN; COMPND 5 SYNONYM: KLHL20, KELCH-LIKE ECT2-INTERACTING PROTEIN,KELCH-LIKE COMPND 6 PROTEIN X; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KLHL20, KLEIP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS KELCH DOMAIN, KLHL20, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.C.YEH,M.C.HO REVDAT 1 14-NOV-18 5YQ4 0 JRNL AUTH M.C.YEH,M.C.HO JRNL TITL THE CRYSTAL STRUCTURE OF KELCH DOMAIN OF KLHL20 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 38031 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2069 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2680 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.1750 REMARK 3 BIN FREE R VALUE SET COUNT : 141 REMARK 3 BIN FREE R VALUE : 0.2540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2160 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.18000 REMARK 3 B22 (A**2) : 0.33000 REMARK 3 B33 (A**2) : -0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.077 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.078 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.298 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2266 ; 0.024 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2068 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3097 ; 2.205 ; 1.943 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4778 ; 1.150 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 307 ; 7.067 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 99 ;27.242 ;22.424 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 359 ;12.660 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;14.720 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 341 ; 0.153 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2617 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 506 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5YQ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1300005720. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40146 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.600 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 8.60 REMARK 200 R MERGE FOR SHELL (I) : 0.23600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE, PH 5, 20% PEG REMARK 280 6000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 24.97850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.10150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 77.61100 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 24.97850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.10150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 77.61100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 24.97850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.10150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 77.61100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 24.97850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.10150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 77.61100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 899 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 302 REMARK 465 MET A 303 REMARK 465 GLN A 304 REMARK 465 GLY A 305 REMARK 465 PRO A 306 REMARK 465 ARG A 307 REMARK 465 THR A 308 REMARK 465 ARG A 309 REMARK 465 PRO A 310 REMARK 465 ARG A 311 REMARK 465 LYS A 312 REMARK 465 PRO A 313 REMARK 465 ILE A 314 REMARK 465 ARG A 315 REMARK 465 CYS A 316 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 783 O HOH A 783 2555 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 502 CB CYS A 502 SG -0.119 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 355 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 432 NE - CZ - NH2 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG A 442 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG A 449 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 496 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 543 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ASP A 563 CB - CG - OD2 ANGL. DEV. = -7.0 DEGREES REMARK 500 ASP A 575 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 422 -160.93 -125.41 REMARK 500 VAL A 443 -169.86 -115.64 REMARK 500 THR A 471 -48.57 -132.34 REMARK 500 ILE A 490 -166.93 -118.01 REMARK 500 REMARK 500 REMARK: NULL DBREF 5YQ4 A 303 600 UNP Q9Y2M5 KLH20_HUMAN 303 600 SEQADV 5YQ4 SER A 302 UNP Q9Y2M5 EXPRESSION TAG SEQRES 1 A 299 SER MET GLN GLY PRO ARG THR ARG PRO ARG LYS PRO ILE SEQRES 2 A 299 ARG CYS GLY GLU VAL LEU PHE ALA VAL GLY GLY TRP CYS SEQRES 3 A 299 SER GLY ASP ALA ILE SER SER VAL GLU ARG TYR ASP PRO SEQRES 4 A 299 GLN THR ASN GLU TRP ARG MET VAL ALA SER MET SER LYS SEQRES 5 A 299 ARG ARG CYS GLY VAL GLY VAL SER VAL LEU ASP ASP LEU SEQRES 6 A 299 LEU TYR ALA VAL GLY GLY HIS ASP GLY SER SER TYR LEU SEQRES 7 A 299 ASN SER VAL GLU ARG TYR ASP PRO LYS THR ASN GLN TRP SEQRES 8 A 299 SER SER ASP VAL ALA PRO THR SER THR CYS ARG THR SER SEQRES 9 A 299 VAL GLY VAL ALA VAL LEU GLY GLY PHE LEU TYR ALA VAL SEQRES 10 A 299 GLY GLY GLN ASP GLY VAL SER CYS LEU ASN ILE VAL GLU SEQRES 11 A 299 ARG TYR ASP PRO LYS GLU ASN LYS TRP THR ARG VAL ALA SEQRES 12 A 299 SER MET SER THR ARG ARG LEU GLY VAL ALA VAL ALA VAL SEQRES 13 A 299 LEU GLY GLY PHE LEU TYR ALA VAL GLY GLY SER ASP GLY SEQRES 14 A 299 THR SER PRO LEU ASN THR VAL GLU ARG TYR ASN PRO GLN SEQRES 15 A 299 GLU ASN ARG TRP HIS THR ILE ALA PRO MET GLY THR ARG SEQRES 16 A 299 ARG LYS HIS LEU GLY CYS ALA VAL TYR GLN ASP MET ILE SEQRES 17 A 299 TYR ALA VAL GLY GLY ARG ASP ASP THR THR GLU LEU SER SEQRES 18 A 299 SER ALA GLU ARG TYR ASN PRO ARG THR ASN GLN TRP SER SEQRES 19 A 299 PRO VAL VAL ALA MET THR SER ARG ARG SER GLY VAL GLY SEQRES 20 A 299 LEU ALA VAL VAL ASN GLY GLN LEU MET ALA VAL GLY GLY SEQRES 21 A 299 PHE ASP GLY THR THR TYR LEU LYS THR ILE GLU VAL PHE SEQRES 22 A 299 ASP PRO ASP ALA ASN THR TRP ARG LEU TYR GLY GLY MET SEQRES 23 A 299 ASN TYR ARG ARG LEU GLY GLY GLY VAL GLY VAL ILE LYS FORMUL 2 HOH *230(H2 O) SHEET 1 AA1 4 GLU A 344 MET A 347 0 SHEET 2 AA1 4 SER A 333 ASP A 339 -1 N ARG A 337 O ARG A 346 SHEET 3 AA1 4 VAL A 319 CYS A 327 -1 N LEU A 320 O TYR A 338 SHEET 4 AA1 4 GLY A 594 ILE A 599 -1 O GLY A 595 N VAL A 323 SHEET 1 AA2 4 GLY A 359 LEU A 363 0 SHEET 2 AA2 4 LEU A 366 VAL A 370 -1 O TYR A 368 N SER A 361 SHEET 3 AA2 4 VAL A 382 ASP A 386 -1 O TYR A 385 N LEU A 367 SHEET 4 AA2 4 GLN A 391 SER A 393 -1 O SER A 393 N ARG A 384 SHEET 1 AA3 2 HIS A 373 ASP A 374 0 SHEET 2 AA3 2 SER A 377 TYR A 378 -1 O SER A 377 N ASP A 374 SHEET 1 AA4 4 GLY A 407 LEU A 411 0 SHEET 2 AA4 4 PHE A 414 GLN A 421 -1 O VAL A 418 N GLY A 407 SHEET 3 AA4 4 CYS A 426 ASP A 434 -1 O TYR A 433 N LEU A 415 SHEET 4 AA4 4 LYS A 439 ARG A 442 -1 O THR A 441 N ARG A 432 SHEET 1 AA5 4 ALA A 454 LEU A 458 0 SHEET 2 AA5 4 PHE A 461 VAL A 465 -1 O TYR A 463 N ALA A 456 SHEET 3 AA5 4 VAL A 477 ASN A 481 -1 O TYR A 480 N LEU A 462 SHEET 4 AA5 4 ARG A 486 THR A 489 -1 O HIS A 488 N ARG A 479 SHEET 1 AA6 4 GLY A 501 TYR A 505 0 SHEET 2 AA6 4 MET A 508 VAL A 512 -1 O TYR A 510 N ALA A 503 SHEET 3 AA6 4 ALA A 524 ASN A 528 -1 O GLU A 525 N ALA A 511 SHEET 4 AA6 4 GLN A 533 VAL A 537 -1 O VAL A 537 N ALA A 524 SHEET 1 AA7 4 GLY A 548 VAL A 552 0 SHEET 2 AA7 4 GLN A 555 VAL A 559 -1 O MET A 557 N ALA A 550 SHEET 3 AA7 4 THR A 570 ASP A 575 -1 O PHE A 574 N LEU A 556 SHEET 4 AA7 4 THR A 580 GLY A 585 -1 O THR A 580 N ASP A 575 SSBOND 1 CYS A 327 CYS A 356 1555 1555 2.02 CRYST1 49.957 74.203 155.222 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020017 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013477 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006442 0.00000