data_5YXI # _entry.id 5YXI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.370 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5YXI pdb_00005yxi 10.2210/pdb5yxi/pdb WWPDB D_1300006039 ? ? BMRB 36136 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Designed protein dRafX6' _pdbx_database_related.db_id 36136 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5YXI _pdbx_database_status.recvd_initial_deposition_date 2017-12-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # _audit_author.name 'Liu, R.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biotechnol.Bioeng. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1097-0290 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 118 _citation.language ? _citation.page_first 2031 _citation.page_last 2042 _citation.title ;De novo sequence redesign of a functional Ras-binding domain globally inverted the surface charge distribution and led to extreme thermostability. ; _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/bit.27716 _citation.pdbx_database_id_PubMed 33590881 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, R.' 1 0000-0001-8540-890X primary 'Wang, J.' 2 ? primary 'Xiong, P.' 3 ? primary 'Chen, Q.' 4 ? primary 'Liu, H.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Designed protein dRafX6' _entity.formula_weight 8763.368 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MADRTIEVELPNKQRTVINVRPGLTLKEALKKALKVRGIDPNKVQVYLLLSGDDGAEQPLSLNHPAERLIGKKLKVVPL _entity_poly.pdbx_seq_one_letter_code_can MADRTIEVELPNKQRTVINVRPGLTLKEALKKALKVRGIDPNKVQVYLLLSGDDGAEQPLSLNHPAERLIGKKLKVVPL _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ASP n 1 4 ARG n 1 5 THR n 1 6 ILE n 1 7 GLU n 1 8 VAL n 1 9 GLU n 1 10 LEU n 1 11 PRO n 1 12 ASN n 1 13 LYS n 1 14 GLN n 1 15 ARG n 1 16 THR n 1 17 VAL n 1 18 ILE n 1 19 ASN n 1 20 VAL n 1 21 ARG n 1 22 PRO n 1 23 GLY n 1 24 LEU n 1 25 THR n 1 26 LEU n 1 27 LYS n 1 28 GLU n 1 29 ALA n 1 30 LEU n 1 31 LYS n 1 32 LYS n 1 33 ALA n 1 34 LEU n 1 35 LYS n 1 36 VAL n 1 37 ARG n 1 38 GLY n 1 39 ILE n 1 40 ASP n 1 41 PRO n 1 42 ASN n 1 43 LYS n 1 44 VAL n 1 45 GLN n 1 46 VAL n 1 47 TYR n 1 48 LEU n 1 49 LEU n 1 50 LEU n 1 51 SER n 1 52 GLY n 1 53 ASP n 1 54 ASP n 1 55 GLY n 1 56 ALA n 1 57 GLU n 1 58 GLN n 1 59 PRO n 1 60 LEU n 1 61 SER n 1 62 LEU n 1 63 ASN n 1 64 HIS n 1 65 PRO n 1 66 ALA n 1 67 GLU n 1 68 ARG n 1 69 LEU n 1 70 ILE n 1 71 GLY n 1 72 LYS n 1 73 LYS n 1 74 LEU n 1 75 LYS n 1 76 VAL n 1 77 VAL n 1 78 PRO n 1 79 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 79 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5YXI _struct_ref.pdbx_db_accession 5YXI _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5YXI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 79 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5YXI _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 79 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 79 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '3D 1H-15N TOCSY' 1 isotropic 3 1 1 '3D CBCA(CO)NH' 1 isotropic 4 1 1 '3D C(CO)NH' 1 isotropic 5 1 1 '3D HNCACB' 1 isotropic 9 1 1 '3D CBCA(CO)NH' 1 isotropic 8 1 1 '3D HBHA(CO)NH' 1 isotropic 7 1 1 '3D HN(CO)CA' 1 isotropic 6 1 1 '3D H(CCO)NH' 1 isotropic 10 1 1 '3D 1H-13C NOESY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.05 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.02 mM sodium phosphate, 0.01 mM EDTA, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 13C_15N_sample _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DMX _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 5YXI _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 5YXI _pdbx_nmr_ensemble.conformers_calculated_total_number 1000 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5YXI _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement CYANA ? 'Guntert P.' 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 4 'chemical shift assignment' Sparky ? Goddard 5 'peak picking' Sparky ? Goddard # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5YXI _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5YXI _struct.title 'Designed protein dRafX6' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5YXI _struct_keywords.text 'Designed protein, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 25 ? GLY A 38 ? THR A 25 GLY A 38 1 ? 14 HELX_P HELX_P2 AA2 PRO A 65 ? ILE A 70 ? PRO A 65 ILE A 70 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 14 ? ASN A 19 ? GLN A 14 ASN A 19 AA1 2 THR A 5 ? LEU A 10 ? THR A 5 LEU A 10 AA1 3 LYS A 73 ? PRO A 78 ? LYS A 73 PRO A 78 AA1 4 VAL A 44 ? LEU A 48 ? VAL A 44 LEU A 48 AA1 5 GLN A 58 ? PRO A 59 ? GLN A 58 PRO A 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ILE A 18 ? O ILE A 18 N ILE A 6 ? N ILE A 6 AA1 2 3 N GLU A 9 ? N GLU A 9 O LEU A 74 ? O LEU A 74 AA1 3 4 O LYS A 75 ? O LYS A 75 N TYR A 47 ? N TYR A 47 AA1 4 5 N LEU A 48 ? N LEU A 48 O GLN A 58 ? O GLN A 58 # _atom_sites.entry_id 5YXI _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 HIS 64 64 64 HIS HIS A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 LEU 79 79 79 LEU LEU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 5560 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-12-05 2 'Structure model' 1 1 2022-02-23 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Structure summary' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 4 2 'Structure model' entity 5 2 'Structure model' pdbx_nmr_software 6 3 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_database_2.pdbx_DOI' 13 2 'Structure model' '_database_2.pdbx_database_accession' 14 2 'Structure model' '_entity.pdbx_description' 15 2 'Structure model' '_pdbx_nmr_software.name' 16 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'sodium phosphate' 0.02 ? mM 'natural abundance' 1 EDTA 0.01 ? mM 'natural abundance' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 2 ? ? 69.09 -77.06 2 1 ARG A 4 ? ? -104.55 53.62 3 1 ASN A 12 ? ? 87.44 31.92 4 1 LEU A 50 ? ? -126.98 -74.66 5 1 SER A 51 ? ? -179.59 -74.59 6 1 ALA A 56 ? ? 61.46 101.34 7 1 GLU A 57 ? ? 62.84 93.95 8 1 LEU A 69 ? ? -146.45 39.59 9 2 ASN A 12 ? ? 86.43 31.23 10 2 LEU A 50 ? ? -111.50 -72.55 11 2 SER A 51 ? ? -179.51 -61.08 12 2 ASP A 53 ? ? -99.43 -64.49 13 2 GLU A 57 ? ? -176.74 100.30 14 2 LEU A 69 ? ? -143.06 56.55 15 3 ASN A 12 ? ? 85.21 31.43 16 3 PRO A 22 ? ? -69.77 88.60 17 3 SER A 51 ? ? -153.66 25.30 18 3 ASP A 53 ? ? -179.16 39.24 19 3 ALA A 56 ? ? 65.09 112.65 20 3 GLU A 57 ? ? 58.35 92.24 21 3 LEU A 69 ? ? -144.18 54.58 22 4 ALA A 2 ? ? 63.11 -175.10 23 4 ASN A 12 ? ? 87.82 30.45 24 4 LEU A 50 ? ? -122.07 -73.87 25 4 SER A 51 ? ? -179.35 -72.44 26 4 ALA A 56 ? ? 62.20 102.80 27 4 GLU A 57 ? ? 63.30 93.87 28 4 LEU A 69 ? ? -154.01 44.41 29 5 ASP A 3 ? ? 63.26 -178.71 30 5 ASN A 12 ? ? 86.67 31.80 31 5 LYS A 43 ? ? -140.25 11.48 32 5 SER A 51 ? ? 58.05 178.03 33 5 ALA A 56 ? ? 51.56 -169.22 34 5 GLU A 57 ? ? 57.59 94.46 35 5 LEU A 69 ? ? -145.88 54.35 36 6 ASP A 3 ? ? -59.46 108.76 37 6 ARG A 4 ? ? -103.11 57.60 38 6 ASN A 12 ? ? 86.71 31.52 39 6 PRO A 22 ? ? -69.78 91.39 40 6 SER A 51 ? ? 69.72 -75.46 41 6 ASP A 53 ? ? -176.56 53.47 42 7 ASP A 3 ? ? -170.85 140.66 43 7 ASN A 12 ? ? 85.83 30.62 44 7 SER A 51 ? ? 65.63 95.53 45 7 ASP A 53 ? ? -129.20 -63.56 46 7 ALA A 56 ? ? 63.41 156.31 47 7 GLU A 57 ? ? -178.67 84.86 48 7 LEU A 69 ? ? -164.39 27.93 49 8 ARG A 4 ? ? -116.04 61.15 50 8 ASN A 12 ? ? 85.23 31.68 51 8 PRO A 22 ? ? -69.73 83.56 52 8 ASP A 53 ? ? -141.63 -54.73 53 8 ALA A 56 ? ? 65.25 113.03 54 8 GLU A 57 ? ? 63.23 93.72 55 8 LEU A 69 ? ? -154.92 24.55 56 9 ASP A 3 ? ? -64.79 -74.78 57 9 ARG A 4 ? ? -79.21 -169.73 58 9 THR A 5 ? ? 61.49 163.41 59 9 ASN A 12 ? ? 84.47 31.05 60 9 PRO A 22 ? ? -69.77 98.08 61 9 ASP A 53 ? ? -153.10 -74.30 62 9 ALA A 56 ? ? 65.05 153.12 63 9 GLU A 57 ? ? 54.58 91.48 64 9 LEU A 69 ? ? -151.51 34.77 65 10 ALA A 2 ? ? 60.49 68.24 66 10 ASP A 3 ? ? -108.52 -71.35 67 10 ASN A 12 ? ? 88.62 24.68 68 10 SER A 51 ? ? -177.27 -169.88 69 10 ASP A 53 ? ? -134.86 -67.00 70 10 ALA A 56 ? ? 63.55 159.43 71 10 GLU A 57 ? ? 55.72 92.49 72 10 LEU A 69 ? ? -142.53 54.43 73 11 ALA A 2 ? ? -164.24 92.67 74 11 ASN A 12 ? ? 89.48 30.27 75 11 LEU A 50 ? ? -123.40 -75.25 76 11 SER A 51 ? ? -179.99 -74.80 77 11 ALA A 56 ? ? 64.20 108.60 78 11 GLU A 57 ? ? 60.81 92.83 79 12 ALA A 2 ? ? -178.07 144.53 80 12 ASP A 3 ? ? -169.97 43.85 81 12 ARG A 4 ? ? -171.67 60.90 82 12 ASN A 12 ? ? 81.12 31.82 83 12 LEU A 50 ? ? 64.06 143.83 84 12 SER A 51 ? ? -175.82 32.31 85 12 ASP A 53 ? ? 179.43 50.60 86 12 GLU A 57 ? ? 179.20 92.22 87 12 LEU A 69 ? ? -149.45 59.86 88 13 ASP A 3 ? ? -120.86 -59.27 89 13 ARG A 4 ? ? -103.37 69.77 90 13 ASN A 12 ? ? 84.90 31.98 91 13 LEU A 50 ? ? -120.37 -70.52 92 13 SER A 51 ? ? -179.28 -35.24 93 13 ALA A 56 ? ? 64.61 109.06 94 13 GLU A 57 ? ? 62.71 93.43 95 14 ALA A 2 ? ? -159.70 -59.90 96 14 ASN A 12 ? ? 87.50 32.06 97 14 LYS A 43 ? ? -142.39 20.12 98 14 ASP A 53 ? ? -178.04 33.87 99 14 GLU A 57 ? ? -178.41 96.75 100 14 LEU A 69 ? ? -165.66 31.89 101 15 ASN A 12 ? ? 81.94 32.54 102 15 PRO A 22 ? ? -69.74 95.68 103 15 LEU A 50 ? ? -95.10 -75.46 104 15 SER A 51 ? ? -179.69 -169.50 105 15 ALA A 56 ? ? 72.25 -69.56 106 15 GLU A 57 ? ? 63.75 93.17 107 16 ASP A 3 ? ? -142.12 -51.89 108 16 ASN A 12 ? ? 83.00 31.13 109 16 LYS A 43 ? ? -143.36 18.73 110 16 ASP A 53 ? ? -145.85 -58.20 111 16 ALA A 56 ? ? 65.85 116.50 112 16 GLU A 57 ? ? 58.39 91.21 113 16 LEU A 69 ? ? -156.40 22.90 114 17 ALA A 2 ? ? 62.84 97.45 115 17 ASP A 3 ? ? -101.21 43.15 116 17 ASN A 12 ? ? 93.79 21.61 117 17 LEU A 50 ? ? -129.01 -169.26 118 17 ASP A 53 ? ? -177.72 33.49 119 17 ALA A 56 ? ? 52.28 89.17 120 17 GLU A 57 ? ? -179.51 93.64 121 17 LEU A 69 ? ? -146.08 57.50 122 18 ALA A 2 ? ? -136.72 -46.29 123 18 ASN A 12 ? ? 87.40 31.92 124 18 ALA A 56 ? ? 60.81 100.31 125 18 GLU A 57 ? ? 61.58 95.84 126 19 ALA A 2 ? ? -145.61 -48.73 127 19 ASP A 3 ? ? 57.31 94.26 128 19 ASN A 12 ? ? 81.00 31.84 129 19 PRO A 22 ? ? -69.70 98.30 130 19 LEU A 50 ? ? -105.16 -169.24 131 19 SER A 51 ? ? -151.97 25.84 132 19 GLU A 57 ? ? -179.66 93.81 133 20 ALA A 2 ? ? -175.01 -36.35 134 20 ASN A 12 ? ? 87.78 30.06 135 20 PRO A 22 ? ? -69.77 93.90 136 20 LEU A 50 ? ? -114.92 -168.88 137 20 ASP A 53 ? ? -148.94 -74.86 138 20 GLU A 57 ? ? 179.18 93.64 139 20 LEU A 69 ? ? -141.16 27.14 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #