HEADER CONTRACTILE PROTEIN 06-DEC-17 5YXM TITLE CRYSTAL STRUCTURE OF CHLAMYDOMONAS OUTER ARM DYNEIN LIGHT CHAIN 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DYNEIN LIGHT CHAIN 1, AXONEMAL; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNAL1,FLAGELLAR OUTER ARM DYNEIN LIGHT CHAIN 1,ODA-LC COMPND 5 PROTEIN LC1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 3 ORGANISM_COMMON: CHLAMYDOMONAS SMITHII; SOURCE 4 ORGANISM_TAXID: 3055; SOURCE 5 GENE: LC1, CHLREDRAFT_186669; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MOTOR PROTEIN, CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.TODA,H.TANAKA,Y.NISHIKAWA,T.YAGI,G.KURISU REVDAT 3 22-NOV-23 5YXM 1 REMARK REVDAT 2 25-APR-18 5YXM 1 JRNL REVDAT 1 14-MAR-18 5YXM 0 JRNL AUTH A.TODA,H.TANAKA,G.KURISU JRNL TITL STRUCTURAL ATLAS OF DYNEIN MOTORS AT ATOMIC RESOLUTION. JRNL REF BIOPHYS REV V. 10 677 2018 JRNL REFN ISSN 1867-2450 JRNL PMID 29478092 JRNL DOI 10.1007/S12551-018-0402-Y REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 41088 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 2020 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.8609 - 3.7213 0.98 2928 162 0.1578 0.1688 REMARK 3 2 3.7213 - 2.9541 1.00 2878 135 0.1719 0.1923 REMARK 3 3 2.9541 - 2.5808 1.00 2847 147 0.1737 0.1896 REMARK 3 4 2.5808 - 2.3449 1.00 2821 149 0.1613 0.1919 REMARK 3 5 2.3449 - 2.1768 1.00 2812 160 0.1564 0.1931 REMARK 3 6 2.1768 - 2.0485 1.00 2768 169 0.1598 0.1731 REMARK 3 7 2.0485 - 1.9459 1.00 2795 160 0.1612 0.1995 REMARK 3 8 1.9459 - 1.8612 1.00 2785 148 0.1713 0.1838 REMARK 3 9 1.8612 - 1.7896 1.00 2778 129 0.1679 0.1965 REMARK 3 10 1.7896 - 1.7278 1.00 2801 123 0.1809 0.1885 REMARK 3 11 1.7278 - 1.6738 1.00 2796 142 0.1834 0.1909 REMARK 3 12 1.6738 - 1.6260 1.00 2773 142 0.1996 0.2407 REMARK 3 13 1.6260 - 1.5831 1.00 2814 127 0.2109 0.2411 REMARK 3 14 1.5831 - 1.5445 0.89 2472 127 0.2354 0.2408 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1648 REMARK 3 ANGLE : 1.031 2245 REMARK 3 CHIRALITY : 0.067 265 REMARK 3 PLANARITY : 0.006 287 REMARK 3 DIHEDRAL : 8.621 1423 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 3:17 REMARK 3 ORIGIN FOR THE GROUP (A): 6.0796 70.4343 26.3632 REMARK 3 T TENSOR REMARK 3 T11: 0.1400 T22: 0.1970 REMARK 3 T33: 0.2252 T12: 0.0417 REMARK 3 T13: 0.0078 T23: 0.0512 REMARK 3 L TENSOR REMARK 3 L11: 4.9881 L22: 4.5942 REMARK 3 L33: 0.2612 L12: -0.2027 REMARK 3 L13: -1.0467 L23: -0.3997 REMARK 3 S TENSOR REMARK 3 S11: -0.0049 S12: 0.0158 S13: 0.0333 REMARK 3 S21: 0.0131 S22: 0.1963 S23: 0.6428 REMARK 3 S31: -0.0995 S32: -0.4494 S33: -0.1326 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 18:26 REMARK 3 ORIGIN FOR THE GROUP (A): 11.8999 75.7531 36.3195 REMARK 3 T TENSOR REMARK 3 T11: 0.2919 T22: 0.2021 REMARK 3 T33: 0.1646 T12: 0.0665 REMARK 3 T13: 0.0377 T23: -0.0204 REMARK 3 L TENSOR REMARK 3 L11: 5.3731 L22: 8.3830 REMARK 3 L33: 2.6361 L12: 1.5630 REMARK 3 L13: -0.8542 L23: -1.4080 REMARK 3 S TENSOR REMARK 3 S11: 0.0219 S12: -0.3334 S13: 0.1220 REMARK 3 S21: 0.6869 S22: 0.0711 S23: 0.1721 REMARK 3 S31: -0.4490 S32: -0.4114 S33: -0.0548 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 27:55 REMARK 3 ORIGIN FOR THE GROUP (A): 14.6851 69.4962 26.5886 REMARK 3 T TENSOR REMARK 3 T11: 0.0808 T22: 0.0961 REMARK 3 T33: 0.1205 T12: 0.0160 REMARK 3 T13: 0.0209 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 3.1574 L22: 5.0256 REMARK 3 L33: 4.5082 L12: 1.0141 REMARK 3 L13: 0.9733 L23: 0.8793 REMARK 3 S TENSOR REMARK 3 S11: 0.0390 S12: -0.0201 S13: 0.0538 REMARK 3 S21: 0.1377 S22: 0.0285 S23: 0.1951 REMARK 3 S31: -0.1240 S32: -0.2577 S33: -0.0466 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND RESID 56:81 REMARK 3 ORIGIN FOR THE GROUP (A): 20.6269 66.8898 24.8734 REMARK 3 T TENSOR REMARK 3 T11: 0.0607 T22: 0.0763 REMARK 3 T33: 0.0820 T12: 0.0200 REMARK 3 T13: 0.0144 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 3.8006 L22: 5.4965 REMARK 3 L33: 3.8080 L12: 2.1165 REMARK 3 L13: 0.9996 L23: 0.2777 REMARK 3 S TENSOR REMARK 3 S11: 0.0146 S12: 0.0185 S13: 0.0708 REMARK 3 S21: 0.0174 S22: -0.0410 S23: 0.0000 REMARK 3 S31: -0.1708 S32: -0.0287 S33: 0.0238 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND RESID 82:93 REMARK 3 ORIGIN FOR THE GROUP (A): 28.1403 66.9051 20.1017 REMARK 3 T TENSOR REMARK 3 T11: 0.0992 T22: 0.1274 REMARK 3 T33: 0.1293 T12: 0.0311 REMARK 3 T13: 0.0148 T23: 0.0505 REMARK 3 L TENSOR REMARK 3 L11: 6.4487 L22: 8.6253 REMARK 3 L33: 6.8843 L12: 3.6864 REMARK 3 L13: 2.1398 L23: 2.9593 REMARK 3 S TENSOR REMARK 3 S11: -0.0980 S12: 0.3385 S13: 0.1010 REMARK 3 S21: -0.3383 S22: 0.0979 S23: -0.4114 REMARK 3 S31: -0.2920 S32: 0.3627 S33: -0.0089 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND RESID 94:106 REMARK 3 ORIGIN FOR THE GROUP (A): 25.5538 59.8496 26.7934 REMARK 3 T TENSOR REMARK 3 T11: 0.0464 T22: 0.0663 REMARK 3 T33: 0.0678 T12: 0.0177 REMARK 3 T13: 0.0057 T23: 0.0271 REMARK 3 L TENSOR REMARK 3 L11: 4.1303 L22: 6.9825 REMARK 3 L33: 3.1063 L12: 1.2367 REMARK 3 L13: -0.1947 L23: 0.8018 REMARK 3 S TENSOR REMARK 3 S11: 0.0608 S12: -0.0049 S13: -0.0301 REMARK 3 S21: 0.0499 S22: -0.1040 S23: -0.0807 REMARK 3 S31: -0.0725 S32: -0.0572 S33: 0.0587 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND RESID 107:135 REMARK 3 ORIGIN FOR THE GROUP (A): 33.3046 57.1940 24.3677 REMARK 3 T TENSOR REMARK 3 T11: 0.0910 T22: 0.1101 REMARK 3 T33: 0.0846 T12: -0.0082 REMARK 3 T13: -0.0049 T23: 0.0191 REMARK 3 L TENSOR REMARK 3 L11: 2.4659 L22: 4.1064 REMARK 3 L33: 1.4567 L12: -0.9960 REMARK 3 L13: 0.1540 L23: 0.6690 REMARK 3 S TENSOR REMARK 3 S11: 0.0038 S12: 0.0779 S13: 0.1567 REMARK 3 S21: -0.1060 S22: -0.0348 S23: -0.2652 REMARK 3 S31: -0.0604 S32: 0.1605 S33: 0.0219 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND RESID 136:144 REMARK 3 ORIGIN FOR THE GROUP (A): 38.4839 61.2295 31.8644 REMARK 3 T TENSOR REMARK 3 T11: 0.1747 T22: 0.1655 REMARK 3 T33: 0.2534 T12: -0.0099 REMARK 3 T13: -0.0559 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 6.6122 L22: 2.0857 REMARK 3 L33: 7.4027 L12: 0.5473 REMARK 3 L13: -3.2531 L23: 2.8926 REMARK 3 S TENSOR REMARK 3 S11: 0.0676 S12: -0.4273 S13: 0.4883 REMARK 3 S21: 0.1496 S22: 0.1260 S23: -0.4369 REMARK 3 S31: -0.3733 S32: 0.4966 S33: -0.2549 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN A AND RESID 145:169 REMARK 3 ORIGIN FOR THE GROUP (A): 34.2670 42.8754 28.2210 REMARK 3 T TENSOR REMARK 3 T11: 0.0704 T22: 0.1025 REMARK 3 T33: 0.0938 T12: 0.0041 REMARK 3 T13: 0.0101 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.9236 L22: 5.6231 REMARK 3 L33: 3.0201 L12: -0.8273 REMARK 3 L13: 0.9816 L23: 1.0166 REMARK 3 S TENSOR REMARK 3 S11: 0.0600 S12: 0.0411 S13: -0.1137 REMARK 3 S21: 0.0451 S22: -0.0070 S23: -0.0231 REMARK 3 S31: 0.1730 S32: 0.1217 S33: -0.0518 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN A AND RESID 170:177 REMARK 3 ORIGIN FOR THE GROUP (A): 42.4121 53.3982 32.6919 REMARK 3 T TENSOR REMARK 3 T11: 0.1700 T22: 0.2226 REMARK 3 T33: 0.1911 T12: -0.0542 REMARK 3 T13: -0.0579 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 2.8840 L22: 2.2767 REMARK 3 L33: 6.7517 L12: 0.9240 REMARK 3 L13: -3.9151 L23: -0.4885 REMARK 3 S TENSOR REMARK 3 S11: 0.1002 S12: -0.2086 S13: 0.3553 REMARK 3 S21: 0.1240 S22: -0.0496 S23: -0.3538 REMARK 3 S31: -0.6360 S32: 0.7166 S33: -0.1576 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN A AND RESID 178:188 REMARK 3 ORIGIN FOR THE GROUP (A): 36.6215 48.1721 38.9949 REMARK 3 T TENSOR REMARK 3 T11: 0.1257 T22: 0.1484 REMARK 3 T33: 0.1214 T12: 0.0145 REMARK 3 T13: -0.0161 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 5.8580 L22: 3.8364 REMARK 3 L33: 4.6134 L12: -3.7724 REMARK 3 L13: 5.1907 L23: -3.7214 REMARK 3 S TENSOR REMARK 3 S11: -0.0732 S12: -0.3199 S13: -0.1449 REMARK 3 S21: 0.1981 S22: 0.1148 S23: 0.0802 REMARK 3 S31: -0.0944 S32: -0.2824 S33: -0.0603 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN A AND RESID 189:196 REMARK 3 ORIGIN FOR THE GROUP (A): 48.3614 47.2212 35.6788 REMARK 3 T TENSOR REMARK 3 T11: 0.2674 T22: 0.2214 REMARK 3 T33: 0.2355 T12: -0.0442 REMARK 3 T13: 0.0291 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 7.3280 L22: 5.3545 REMARK 3 L33: 7.5427 L12: -4.9846 REMARK 3 L13: -2.1956 L23: 5.0889 REMARK 3 S TENSOR REMARK 3 S11: 0.3443 S12: 0.4146 S13: 0.4926 REMARK 3 S21: -0.9815 S22: -0.0680 S23: -0.7733 REMARK 3 S31: -0.6637 S32: 0.2767 S33: -0.2129 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YXM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1300005901. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41149 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.545 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 36.4900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.94600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.220 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 1A9N, 3OZX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, AMMONIUM PHOSPHATE REMARK 280 MONOBASIC, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.76800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.38750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.61500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.38750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.76800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.61500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLY A 197 REMARK 465 GLY A 198 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 58 -159.43 -138.14 REMARK 500 ASN A 80 -153.69 -130.90 REMARK 500 ILE A 100 29.25 -144.32 REMARK 500 ASN A 103 -164.52 -127.74 REMARK 500 MET A 122 51.45 -146.34 REMARK 500 MET A 122 45.82 -143.35 REMARK 500 ASN A 125 -154.37 -106.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 203 DBREF 5YXM A 1 198 UNP Q9XHH2 DNAL1_CHLRE 1 198 SEQADV 5YXM GLY A -4 UNP Q9XHH2 EXPRESSION TAG SEQADV 5YXM PRO A -3 UNP Q9XHH2 EXPRESSION TAG SEQADV 5YXM LEU A -2 UNP Q9XHH2 EXPRESSION TAG SEQADV 5YXM GLY A -1 UNP Q9XHH2 EXPRESSION TAG SEQADV 5YXM SER A 0 UNP Q9XHH2 EXPRESSION TAG SEQRES 1 A 203 GLY PRO LEU GLY SER MET ALA LYS ALA THR THR ILE LYS SEQRES 2 A 203 ASP ALA ILE ARG ILE PHE GLU GLU ARG LYS SER VAL VAL SEQRES 3 A 203 ALA THR GLU ALA GLU LYS VAL GLU LEU HIS GLY MET ILE SEQRES 4 A 203 PRO PRO ILE GLU LYS MET ASP ALA THR LEU SER THR LEU SEQRES 5 A 203 LYS ALA CYS LYS HIS LEU ALA LEU SER THR ASN ASN ILE SEQRES 6 A 203 GLU LYS ILE SER SER LEU SER GLY MET GLU ASN LEU ARG SEQRES 7 A 203 ILE LEU SER LEU GLY ARG ASN LEU ILE LYS LYS ILE GLU SEQRES 8 A 203 ASN LEU ASP ALA VAL ALA ASP THR LEU GLU GLU LEU TRP SEQRES 9 A 203 ILE SER TYR ASN GLN ILE ALA SER LEU SER GLY ILE GLU SEQRES 10 A 203 LYS LEU VAL ASN LEU ARG VAL LEU TYR MET SER ASN ASN SEQRES 11 A 203 LYS ILE THR ASN TRP GLY GLU ILE ASP LYS LEU ALA ALA SEQRES 12 A 203 LEU ASP LYS LEU GLU ASP LEU LEU LEU ALA GLY ASN PRO SEQRES 13 A 203 LEU TYR ASN ASP TYR LYS GLU ASN ASN ALA THR SER GLU SEQRES 14 A 203 TYR ARG ILE GLU VAL VAL LYS ARG LEU PRO ASN LEU LYS SEQRES 15 A 203 LYS LEU ASP GLY MET PRO VAL ASP VAL ASP GLU ARG GLU SEQRES 16 A 203 GLN ALA ASN VAL ALA ARG GLY GLY HET PO4 A 201 5 HET PO4 A 202 5 HET PO4 A 203 5 HETNAM PO4 PHOSPHATE ION FORMUL 2 PO4 3(O4 P 3-) FORMUL 5 HOH *204(H2 O) HELIX 1 AA1 THR A 6 SER A 19 1 14 HELIX 2 AA2 VAL A 21 ALA A 25 5 5 HELIX 3 AA3 ASP A 41 LEU A 47 5 7 HELIX 4 AA4 LEU A 88 ALA A 92 5 5 HELIX 5 AA5 GLY A 110 LEU A 114 5 5 HELIX 6 AA6 ASN A 129 LYS A 135 1 7 HELIX 7 AA7 LEU A 136 LEU A 139 5 4 HELIX 8 AA8 ASN A 150 ASN A 159 1 10 HELIX 9 AA9 ALA A 161 LEU A 173 1 13 HELIX 10 AB1 ASP A 185 ARG A 196 1 12 SHEET 1 AA1 8 LYS A 27 GLU A 29 0 SHEET 2 AA1 8 HIS A 52 ALA A 54 1 O ALA A 54 N VAL A 28 SHEET 3 AA1 8 ILE A 74 SER A 76 1 O SER A 76 N LEU A 53 SHEET 4 AA1 8 GLU A 97 TRP A 99 1 O TRP A 99 N LEU A 75 SHEET 5 AA1 8 VAL A 119 TYR A 121 1 O TYR A 121 N LEU A 98 SHEET 6 AA1 8 ASP A 144 LEU A 146 1 O ASP A 144 N LEU A 120 SHEET 7 AA1 8 LYS A 178 LEU A 179 1 O LYS A 178 N LEU A 145 SHEET 8 AA1 8 MET A 182 PRO A 183 -1 O MET A 182 N LEU A 179 CISPEP 1 ILE A 34 PRO A 35 0 -1.42 SITE 1 AC1 9 SER A 101 SER A 123 LEU A 146 VAL A 186 SITE 2 AC1 9 GLU A 190 ASN A 193 HOH A 305 HOH A 335 SITE 3 AC1 9 HOH A 365 SITE 1 AC2 7 PRO A 151 ASN A 154 GLU A 158 HOH A 315 SITE 2 AC2 7 HOH A 334 HOH A 356 HOH A 437 SITE 1 AC3 9 LYS A 48 ASN A 129 GLU A 132 HOH A 303 SITE 2 AC3 9 HOH A 312 HOH A 328 HOH A 346 HOH A 380 SITE 3 AC3 9 HOH A 447 CRYST1 53.536 69.230 74.775 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018679 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014445 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013373 0.00000