HEADER CELL ADHESION 06-DEC-17 5YXO TITLE CRYSTAL STRUCTURE OF SHAFT PILIN SPAD FROM LACTOBACILLUS RHAMNOSUS GG TITLE 2 IN BENT CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PILUS ASSEMBLY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS RHAMNOSUS GG; SOURCE 3 ORGANISM_TAXID: 568703; SOURCE 4 STRAIN: GG; SOURCE 5 GENE: CCE29_10230, PY66_09460; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: PLYSS KEYWDS PILIN, SPAD, PROBIOTIC, ISOPEPTIDE, SPAFED PILI, ADHESIN, CELL KEYWDS 2 ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR P.CHAURASIA,S.PRATAP,A.PALVA,I.VON OSSOWSKI,V.KRISHNAN REVDAT 4 22-NOV-23 5YXO 1 REMARK REVDAT 3 17-OCT-18 5YXO 1 JRNL REVDAT 2 01-AUG-18 5YXO 1 JRNL REVDAT 1 20-JUN-18 5YXO 0 JRNL AUTH P.CHAURASIA,S.PRATAP,A.PALVA,I.VON OSSOWSKI,V.KRISHNAN JRNL TITL BENT CONFORMATION OF A BACKBONE PILIN N-TERMINAL DOMAIN JRNL TITL 2 SUPPORTS A THREE-STAGE PILUS ASSEMBLY MECHANISM. JRNL REF COMMUN BIOL V. 1 94 2018 JRNL REFN ESSN 2399-3642 JRNL PMID 30271975 JRNL DOI 10.1038/S42003-018-0100-0 REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 76.7 REMARK 3 NUMBER OF REFLECTIONS : 18151 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 986 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.51 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.58 REMARK 3 REFLECTION IN BIN (WORKING SET) : 108 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 6.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.3310 REMARK 3 BIN FREE R VALUE SET COUNT : 7 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3189 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 24 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.18000 REMARK 3 B22 (A**2) : 0.18000 REMARK 3 B33 (A**2) : -0.58000 REMARK 3 B12 (A**2) : 0.09000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.524 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.342 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.329 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 36.269 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.890 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3253 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2967 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4419 ; 1.134 ; 1.943 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6894 ; 0.836 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 411 ; 6.461 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 143 ;35.553 ;25.385 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 528 ;14.832 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;10.821 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 516 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3621 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 625 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1656 ; 0.904 ; 4.551 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1655 ; 0.905 ; 4.551 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2063 ; 1.561 ; 6.827 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2064 ; 1.561 ; 6.827 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1597 ; 0.921 ; 4.666 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1598 ; 0.920 ; 4.666 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2356 ; 1.602 ; 6.953 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3386 ; 2.894 ;53.189 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3385 ; 2.886 ;53.182 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 181 REMARK 3 ORIGIN FOR THE GROUP (A): 39.6530 -11.7890 2.4830 REMARK 3 T TENSOR REMARK 3 T11: 0.1457 T22: 0.0263 REMARK 3 T33: 0.2366 T12: -0.0151 REMARK 3 T13: -0.0674 T23: 0.0696 REMARK 3 L TENSOR REMARK 3 L11: 4.5784 L22: 6.3120 REMARK 3 L33: 5.5953 L12: -0.8508 REMARK 3 L13: 0.1865 L23: 0.4594 REMARK 3 S TENSOR REMARK 3 S11: -0.1935 S12: -0.1319 S13: -0.1345 REMARK 3 S21: 0.5203 S22: -0.2328 S23: -0.4874 REMARK 3 S31: 0.2019 S32: 0.1615 S33: 0.4264 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 182 A 358 REMARK 3 ORIGIN FOR THE GROUP (A): 22.1440 -29.1150 -8.2420 REMARK 3 T TENSOR REMARK 3 T11: 0.0667 T22: 0.0457 REMARK 3 T33: 0.0485 T12: 0.0248 REMARK 3 T13: -0.0026 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 2.7306 L22: 5.9841 REMARK 3 L33: 1.4420 L12: -1.8877 REMARK 3 L13: 0.1798 L23: -1.3030 REMARK 3 S TENSOR REMARK 3 S11: -0.1804 S12: -0.2463 S13: -0.1076 REMARK 3 S21: 0.1588 S22: 0.1757 S23: 0.0741 REMARK 3 S31: 0.1326 S32: -0.1187 S33: 0.0047 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 359 A 481 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3790 3.9070 -22.5340 REMARK 3 T TENSOR REMARK 3 T11: 0.0516 T22: 0.0570 REMARK 3 T33: 0.0590 T12: 0.0127 REMARK 3 T13: 0.0118 T23: 0.0363 REMARK 3 L TENSOR REMARK 3 L11: 3.8255 L22: 6.4940 REMARK 3 L33: 4.9817 L12: -3.3286 REMARK 3 L13: 1.0978 L23: -0.1049 REMARK 3 S TENSOR REMARK 3 S11: 0.0786 S12: -0.1951 S13: 0.0887 REMARK 3 S21: 0.0932 S22: 0.0189 S23: -0.1590 REMARK 3 S31: -0.2529 S32: -0.1165 S33: -0.0975 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5YXO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1300005886. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95372 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19138 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.510 REMARK 200 RESOLUTION RANGE LOW (A) : 71.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.6 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 45.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.80000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5YU5, 5YXG REMARK 200 REMARK 200 REMARK: THREE DIMENSIONAL PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 1500, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 285.77267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 142.88633 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 214.32950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 71.44317 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 357.21583 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 285.77267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 142.88633 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 71.44317 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 214.32950 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 357.21583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 29 REMARK 465 GLY A 30 REMARK 465 ARG A 31 REMARK 465 ASP A 32 REMARK 465 PRO A 33 REMARK 465 ASN A 34 REMARK 465 SER A 35 REMARK 465 THR A 36 REMARK 465 GLN A 48 REMARK 465 THR A 49 REMARK 465 SER A 50 REMARK 465 ASP A 51 REMARK 465 GLU A 52 REMARK 465 GLN A 53 REMARK 465 ILE A 54 REMARK 465 GLN A 55 REMARK 465 ASN A 56 REMARK 465 THR A 57 REMARK 465 GLY A 58 REMARK 465 HIS A 59 REMARK 465 ASP A 60 REMARK 465 LEU A 61 REMARK 465 GLY A 62 REMARK 465 LEU A 63 REMARK 465 THR A 64 REMARK 465 GLY A 65 REMARK 465 ARG A 165 REMARK 465 GLN A 166 REMARK 465 ASP A 167 REMARK 465 ASP A 168 REMARK 465 GLY A 169 REMARK 465 SER A 170 REMARK 465 ASP A 227 REMARK 465 HIS A 228 REMARK 465 SER A 229 REMARK 465 GLN A 230 REMARK 465 ASP A 231 REMARK 465 THR A 232 REMARK 465 GLN A 482 REMARK 465 LEU A 483 REMARK 465 LEU A 484 REMARK 465 PRO A 485 REMARK 465 LEU A 486 REMARK 465 GLU A 487 REMARK 465 HIS A 488 REMARK 465 HIS A 489 REMARK 465 HIS A 490 REMARK 465 HIS A 491 REMARK 465 HIS A 492 REMARK 465 HIS A 493 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 171 CG OD1 OD2 REMARK 470 LEU A 172 CG CD1 CD2 REMARK 470 ASN A 481 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 102 75.00 -118.47 REMARK 500 ASP A 221 40.60 -102.83 REMARK 500 GLN A 333 103.48 -162.03 REMARK 500 SER A 371 41.80 -108.50 REMARK 500 ALA A 429 120.84 -170.76 REMARK 500 LEU A 431 107.29 -162.29 REMARK 500 LEU A 455 -70.88 -89.09 REMARK 500 ALA A 465 102.35 -55.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5YU5 RELATED DB: PDB REMARK 900 STRUCTURE OF SAME PROTEIN IN EXTENDED CONFORMATION REMARK 900 RELATED ID: 5YXG RELATED DB: PDB REMARK 900 C-TERMINAL FRAGMENT OF SAME PROTEIN OBTAINED BY LIMITED PROTEOLYSIS DBREF1 5YXO A 36 485 UNP A0A179XFF5_LACRH DBREF2 5YXO A A0A179XFF5 36 485 SEQADV 5YXO MET A 29 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO GLY A 30 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO ARG A 31 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO ASP A 32 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO PRO A 33 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO ASN A 34 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO SER A 35 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO LEU A 486 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO GLU A 487 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO HIS A 488 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO HIS A 489 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO HIS A 490 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO HIS A 491 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO HIS A 492 UNP A0A179XFF EXPRESSION TAG SEQADV 5YXO HIS A 493 UNP A0A179XFF EXPRESSION TAG SEQRES 1 A 465 MET GLY ARG ASP PRO ASN SER THR THR THR VAL ASP PHE SEQRES 2 A 465 THR LEU HIS LYS ILE GLU GLN THR SER ASP GLU GLN ILE SEQRES 3 A 465 GLN ASN THR GLY HIS ASP LEU GLY LEU THR GLY ARG LYS SEQRES 4 A 465 PRO VAL GLN GLY ALA GLN PHE LYS ILE PHE ASN VAL THR SEQRES 5 A 465 ASP ALA PHE TYR GLN LEU LEU GLU ASN HIS ASP LYS THR SEQRES 6 A 465 THR ALA ALA SER MET ILE SER GLN ASN LEU GLY GLN TYR SEQRES 7 A 465 VAL ASN LEU GLN ASP PRO ASN ALA ALA THR VAL THR THR SEQRES 8 A 465 ASP ALA ASP GLY LEU ALA ALA PHE LYS GLY LEU ALA ALA SEQRES 9 A 465 LYS THR ASN GLY ARG HIS SER VAL TYR ALA PHE HIS GLU SEQRES 10 A 465 ALA VAL THR PRO GLN PRO TYR GLN LYS ALA ALA ASP MET SEQRES 11 A 465 ILE VAL SER LEU PRO VAL ARG GLN ASP ASP GLY SER ASP SEQRES 12 A 465 LEU THR ASN ILE HIS LEU TYR PRO LYS ASP SER LEU VAL SEQRES 13 A 465 THR LYS ASN LEU THR GLU ILE ASN GLU GLN ALA VAL ALA SEQRES 14 A 465 THR LYS ASP LEU HIS ASP VAL ALA VAL GLY ASP VAL LEU SEQRES 15 A 465 THR TYR GLN VAL GLN PHE GLN ILE PRO HIS ASP ILE GLY SEQRES 16 A 465 ALA LEU ALA ASP HIS SER GLN ASP THR PHE LYS TYR ASN SEQRES 17 A 465 GLN PHE LYS VAL LEU ASP TYR MET THR LYS GLU GLY LEU SEQRES 18 A 465 THR PHE LYS ALA LEU THR ALA ILE THR VAL ASP GLY GLN SEQRES 19 A 465 ASP ILE LEU LYS ALA LEU THR GLY LYS MET ALA PHE MET SEQRES 20 A 465 SER SER ASN ASP ALA ALA TRP GLN GLN THR HIS ASN TYR SEQRES 21 A 465 PRO PHE GLY PHE GLU LEU ASP PHE LEU GLY GLY THR ASP SEQRES 22 A 465 PRO ASP ALA VAL ARG ASN LEU LEU THR GLN TYR ALA GLY SEQRES 23 A 465 LYS ARG VAL THR VAL ALA TYR THR GLY ILE VAL ASN GLU SEQRES 24 A 465 LYS MET ILE PRO ASP GLN LYS VAL GLY ASN THR ALA GLU SEQRES 25 A 465 VAL SER PHE ASP PRO ASP SER LYS ILE THR VAL ASN GLY SEQRES 26 A 465 PRO GLU ILE GLN THR GLY GLY ILE ARG PHE PHE LYS HIS SEQRES 27 A 465 GLU ALA GLY SER SER LYS SER LEU ALA ASN ALA THR PHE SEQRES 28 A 465 ILE LEU GLN ARG MET ASN GLY ASN VAL ARG GLU TYR ALA SEQRES 29 A 465 VAL LEU GLU GLY VAL ASN GLY MET ALA GLY THR TYR GLN SEQRES 30 A 465 PRO THR LYS ILE THR TRP THR THR ASN GLN ASP ALA ALA SEQRES 31 A 465 THR ARG LEU LYS THR SER GLY ALA GLU THR ALA ASN LEU SEQRES 32 A 465 THR ILE GLN GLY LEU LEU PRO GLY ARG TYR THR LEU VAL SEQRES 33 A 465 GLU THR ALA ALA PRO GLU GLY TYR GLU ILE LEU ASP PRO SEQRES 34 A 465 THR THR ASP PHE GLU VAL ILE ALA GLY THR TRP GLY THR SEQRES 35 A 465 LYS THR ILE ARG ILE ALA ASN THR PRO VAL ASN GLN LEU SEQRES 36 A 465 LEU PRO LEU GLU HIS HIS HIS HIS HIS HIS FORMUL 2 HOH *24(H2 O) HELIX 1 AA1 VAL A 79 HIS A 90 1 12 HELIX 2 AA2 ASP A 91 ASN A 102 1 12 HELIX 3 AA3 LEU A 103 TYR A 106 5 4 HELIX 4 AA4 ILE A 264 THR A 269 1 6 HELIX 5 AA5 ASP A 279 HIS A 286 1 8 HELIX 6 AA6 LEU A 297 GLY A 299 5 3 HELIX 7 AA7 ASP A 301 GLN A 311 1 11 HELIX 8 AA8 ASN A 414 ALA A 418 5 5 SHEET 1 AA1 3 LEU A 124 ALA A 131 0 SHEET 2 AA1 3 THR A 38 HIS A 44 -1 N LEU A 43 O ALA A 125 SHEET 3 AA1 3 ASN A 174 LEU A 177 1 O ILE A 175 N THR A 42 SHEET 1 AA2 4 THR A 116 THR A 118 0 SHEET 2 AA2 4 GLN A 73 ASN A 78 -1 N PHE A 74 O VAL A 117 SHEET 3 AA2 4 VAL A 140 THR A 148 -1 O ALA A 142 N PHE A 77 SHEET 4 AA2 4 ILE A 159 SER A 161 -1 O VAL A 160 N TYR A 141 SHEET 1 AA3 4 THR A 116 THR A 118 0 SHEET 2 AA3 4 GLN A 73 ASN A 78 -1 N PHE A 74 O VAL A 117 SHEET 3 AA3 4 VAL A 140 THR A 148 -1 O ALA A 142 N PHE A 77 SHEET 4 AA3 4 THR A 198 LYS A 199 -1 O THR A 198 N THR A 148 SHEET 1 AA4 5 VAL A 184 ILE A 191 0 SHEET 2 AA4 5 VAL A 209 GLN A 217 -1 O THR A 211 N GLU A 190 SHEET 3 AA4 5 ARG A 316 VAL A 325 -1 O TYR A 321 N TYR A 212 SHEET 4 AA4 5 LEU A 249 VAL A 259 -1 N ALA A 253 O THR A 322 SHEET 5 AA4 5 GLN A 262 ASP A 263 -1 O GLN A 262 N VAL A 259 SHEET 1 AA5 4 LEU A 201 VAL A 204 0 SHEET 2 AA5 4 GLU A 355 GLU A 367 1 O GLN A 357 N VAL A 204 SHEET 3 AA5 4 LEU A 431 LEU A 436 -1 O LEU A 431 N PHE A 363 SHEET 4 AA5 4 THR A 403 TYR A 404 1 N TYR A 404 O THR A 432 SHEET 1 AA6 4 LYS A 372 SER A 373 0 SHEET 2 AA6 4 GLU A 355 GLU A 367 -1 N GLU A 367 O LYS A 372 SHEET 3 AA6 4 ILE A 473 PRO A 479 1 O ILE A 473 N ARG A 362 SHEET 4 AA6 4 TYR A 452 ILE A 454 -1 N GLU A 453 O THR A 478 SHEET 1 AA7 5 ALA A 273 SER A 276 0 SHEET 2 AA7 5 PHE A 290 ASP A 295 -1 O GLU A 293 N MET A 275 SHEET 3 AA7 5 LYS A 239 MET A 244 -1 N ASP A 242 O PHE A 292 SHEET 4 AA7 5 THR A 338 SER A 342 -1 O GLU A 340 N LEU A 241 SHEET 5 AA7 5 LYS A 348 ASN A 352 -1 O ILE A 349 N VAL A 341 SHEET 1 AA8 4 LYS A 408 THR A 412 0 SHEET 2 AA8 4 VAL A 388 GLU A 395 -1 N TYR A 391 O THR A 412 SHEET 3 AA8 4 THR A 378 ASN A 385 -1 N ARG A 383 O GLU A 390 SHEET 4 AA8 4 LEU A 421 LYS A 422 -1 O LEU A 421 N PHE A 379 SHEET 1 AA9 5 LYS A 408 THR A 412 0 SHEET 2 AA9 5 VAL A 388 GLU A 395 -1 N TYR A 391 O THR A 412 SHEET 3 AA9 5 THR A 378 ASN A 385 -1 N ARG A 383 O GLU A 390 SHEET 4 AA9 5 GLY A 439 ALA A 447 -1 O VAL A 444 N ILE A 380 SHEET 5 AA9 5 THR A 458 VAL A 463 -1 O THR A 459 N LEU A 443 LINK NZ LYS A 186 CG ASN A 337 1555 1555 1.33 LINK NZ LYS A 365 CG ASN A 477 1555 1555 1.33 CISPEP 1 GLN A 150 PRO A 151 0 -2.53 CISPEP 2 LEU A 162 PRO A 163 0 5.34 CRYST1 73.720 73.720 428.659 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013565 0.007832 0.000000 0.00000 SCALE2 0.000000 0.015663 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002333 0.00000