HEADER TRANSFERASE 08-DEC-17 5YYA TITLE CRYSTAL STRUCTURE OF TANDEM TUDOR DOMAIN OF HUMAN UHRF1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE UHRF1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TANDEM TUDOR DOMAIN; COMPND 5 SYNONYM: INVERTED CCAAT BOX-BINDING PROTEIN OF 90 KDA,NUCLEAR PROTEIN COMPND 6 95,NUCLEAR ZINC FINGER PROTEIN NP95,HNP95,RING FINGER PROTEIN 106, COMPND 7 RING-TYPE E3 UBIQUITIN TRANSFERASE UHRF1,TRANSCRIPTION FACTOR ICBP90, COMPND 8 UBIQUITIN-LIKE PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1, COMPND 9 HUHRF1,UBIQUITIN-LIKE-CONTAINING PHD AND RING FINGER DOMAINS PROTEIN COMPND 10 1; COMPND 11 EC: 2.3.2.27; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UHRF1, ICBP90, NP95, RNF106; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA2 (DE3) KEYWDS MAINTENANCE OF DNA METHYLATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.KORI,P.A.DEFOSSEZ,K.ARITA REVDAT 4 22-NOV-23 5YYA 1 REMARK REVDAT 3 20-MAR-19 5YYA 1 JRNL REVDAT 2 23-JAN-19 5YYA 1 JRNL REVDAT 1 12-DEC-18 5YYA 0 JRNL AUTH S.KORI,L.FERRY,S.MATANO,T.JIMENJI,N.KODERA,T.TSUSAKA, JRNL AUTH 2 R.MATSUMURA,T.ODA,M.SATO,N.DOHMAE,T.ANDO,Y.SHINKAI, JRNL AUTH 3 P.A.DEFOSSEZ,K.ARITA JRNL TITL STRUCTURE OF THE UHRF1 TANDEM TUDOR DOMAIN BOUND TO A JRNL TITL 2 METHYLATED NON-HISTONE PROTEIN, LIG1, REVEALS RULES FOR JRNL TITL 3 BINDING AND REGULATION. JRNL REF STRUCTURE V. 27 485 2019 JRNL REFN ISSN 1878-4186 JRNL PMID 30639225 JRNL DOI 10.1016/J.STR.2018.11.012 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 17884 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 886 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.4586 - 3.0885 1.00 3050 158 0.1609 0.1729 REMARK 3 2 3.0885 - 2.4516 1.00 2891 162 0.1832 0.2403 REMARK 3 3 2.4516 - 2.1418 1.00 2853 151 0.1767 0.2287 REMARK 3 4 2.1418 - 1.9460 0.99 2839 159 0.1685 0.1989 REMARK 3 5 1.9460 - 1.8065 0.99 2830 136 0.1776 0.2330 REMARK 3 6 1.8065 - 1.7000 0.89 2535 120 0.1914 0.2138 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1378 REMARK 3 ANGLE : 0.626 1869 REMARK 3 CHIRALITY : 0.054 195 REMARK 3 PLANARITY : 0.005 251 REMARK 3 DIHEDRAL : 10.858 1156 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.2060 4.7707 -3.8128 REMARK 3 T TENSOR REMARK 3 T11: 0.1447 T22: 0.1253 REMARK 3 T33: 0.1245 T12: 0.0161 REMARK 3 T13: 0.0079 T23: -0.0103 REMARK 3 L TENSOR REMARK 3 L11: 0.6701 L22: 1.0955 REMARK 3 L33: 2.3748 L12: -0.5838 REMARK 3 L13: 0.3679 L23: -1.3784 REMARK 3 S TENSOR REMARK 3 S11: -0.0476 S12: -0.1286 S13: -0.0223 REMARK 3 S21: 0.1619 S22: -0.0252 S23: 0.0067 REMARK 3 S31: -0.0479 S32: 0.0557 S33: 0.0548 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5131 4.6750 17.8060 REMARK 3 T TENSOR REMARK 3 T11: 0.3268 T22: 0.2153 REMARK 3 T33: 0.1708 T12: 0.0869 REMARK 3 T13: -0.0083 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 3.3369 L22: 1.9504 REMARK 3 L33: 5.3082 L12: -0.1383 REMARK 3 L13: -3.0726 L23: -2.0703 REMARK 3 S TENSOR REMARK 3 S11: 0.1018 S12: -0.0817 S13: 0.0889 REMARK 3 S21: -0.0345 S22: 0.0265 S23: -0.1992 REMARK 3 S31: -0.6870 S32: -0.0868 S33: -0.0671 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 171 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.6665 7.0869 0.0175 REMARK 3 T TENSOR REMARK 3 T11: 0.1962 T22: 0.1923 REMARK 3 T33: 0.1914 T12: 0.0367 REMARK 3 T13: -0.0044 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 2.9145 L22: 1.7058 REMARK 3 L33: 4.1089 L12: 0.4898 REMARK 3 L13: -1.9112 L23: -1.3815 REMARK 3 S TENSOR REMARK 3 S11: 0.2079 S12: 0.2168 S13: 0.4177 REMARK 3 S21: 0.1819 S22: -0.0167 S23: 0.1361 REMARK 3 S31: -0.3531 S32: -0.1365 S33: -0.0004 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 196 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3927 12.3466 -19.3955 REMARK 3 T TENSOR REMARK 3 T11: 0.0788 T22: 0.0854 REMARK 3 T33: 0.1031 T12: 0.0069 REMARK 3 T13: 0.0236 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.9505 L22: 1.7687 REMARK 3 L33: 1.8316 L12: -0.5137 REMARK 3 L13: 0.4408 L23: -0.8080 REMARK 3 S TENSOR REMARK 3 S11: 0.0070 S12: 0.0133 S13: -0.0114 REMARK 3 S21: -0.0015 S22: -0.0014 S23: 0.0748 REMARK 3 S31: 0.0255 S32: 0.0649 S33: 0.0094 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 237 THROUGH 259 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.8658 18.2937 -28.8978 REMARK 3 T TENSOR REMARK 3 T11: 0.1228 T22: 0.1284 REMARK 3 T33: 0.1333 T12: 0.0110 REMARK 3 T13: -0.0162 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 1.3734 L22: 1.1516 REMARK 3 L33: 2.5785 L12: -0.1971 REMARK 3 L13: 0.8068 L23: -0.4985 REMARK 3 S TENSOR REMARK 3 S11: -0.0465 S12: 0.2416 S13: 0.0797 REMARK 3 S21: -0.1377 S22: 0.0455 S23: 0.1075 REMARK 3 S31: -0.2088 S32: -0.1289 S33: 0.0109 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 260 THROUGH 271 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0825 24.1159 -19.7539 REMARK 3 T TENSOR REMARK 3 T11: 0.1766 T22: 0.1060 REMARK 3 T33: 0.1554 T12: 0.0124 REMARK 3 T13: 0.0105 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 3.4009 L22: 3.0497 REMARK 3 L33: 3.5048 L12: -0.8164 REMARK 3 L13: 0.9927 L23: -1.5719 REMARK 3 S TENSOR REMARK 3 S11: -0.0353 S12: -0.1980 S13: 0.4196 REMARK 3 S21: 0.4125 S22: 0.0190 S23: 0.0360 REMARK 3 S31: -0.6573 S32: -0.2464 S33: 0.0582 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 272 THROUGH 285 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.5541 7.9185 -21.7160 REMARK 3 T TENSOR REMARK 3 T11: 0.1182 T22: 0.1003 REMARK 3 T33: 0.1466 T12: -0.0043 REMARK 3 T13: 0.0110 T23: -0.0263 REMARK 3 L TENSOR REMARK 3 L11: 1.4267 L22: 2.4878 REMARK 3 L33: 4.4890 L12: 0.7522 REMARK 3 L13: -1.5412 L23: -2.8189 REMARK 3 S TENSOR REMARK 3 S11: 0.0348 S12: 0.1751 S13: -0.0432 REMARK 3 S21: 0.0021 S22: 0.0120 S23: 0.1545 REMARK 3 S31: 0.1802 S32: -0.1101 S33: -0.0566 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YYA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1300006089. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17949 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 45.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3DB3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS (PH 6.5), 200 MM REMARK 280 AMMONIUM ACETATE, 25% (W/V) POLYETHYLENE GLYCOL (PEG) 3350, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.39500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.45150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.00200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.45150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.39500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.00200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 122 REMARK 465 ASP A 123 REMARK 465 GLU A 124 REMARK 465 ASP A 125 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 162 CD CE NZ REMARK 470 ARG A 202 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1343 O HOH A 1344 1.83 REMARK 500 O HOH A 1241 O HOH A 1261 1.83 REMARK 500 O HOH A 1270 O HOH A 1275 1.84 REMARK 500 O HOH A 1218 O HOH A 1335 1.98 REMARK 500 O HOH A 1340 O HOH A 1343 1.98 REMARK 500 O HOH A 1326 O HOH A 1335 2.02 REMARK 500 NE ARG A 202 O HOH A 1101 2.15 REMARK 500 OE2 GLU A 248 O HOH A 1102 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 138 -10.89 87.09 REMARK 500 ARG A 209 -21.96 -147.46 REMARK 500 LEU A 261 -158.75 -97.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1004 DBREF 5YYA A 123 285 UNP Q96T88 UHRF1_HUMAN 123 285 SEQADV 5YYA SER A 122 UNP Q96T88 EXPRESSION TAG SEQRES 1 A 164 SER ASP GLU ASP MET TRP ASP GLU THR GLU LEU GLY LEU SEQRES 2 A 164 TYR LYS VAL ASN GLU TYR VAL ASP ALA ARG ASP THR ASN SEQRES 3 A 164 MET GLY ALA TRP PHE GLU ALA GLN VAL VAL ARG VAL THR SEQRES 4 A 164 ARG LYS ALA PRO SER ARG ASP GLU PRO CYS SER SER THR SEQRES 5 A 164 SER ARG PRO ALA LEU GLU GLU ASP VAL ILE TYR HIS VAL SEQRES 6 A 164 LYS TYR ASP ASP TYR PRO GLU ASN GLY VAL VAL GLN MET SEQRES 7 A 164 ASN SER ARG ASP VAL ARG ALA ARG ALA ARG THR ILE ILE SEQRES 8 A 164 LYS TRP GLN ASP LEU GLU VAL GLY GLN VAL VAL MET LEU SEQRES 9 A 164 ASN TYR ASN PRO ASP ASN PRO LYS GLU ARG GLY PHE TRP SEQRES 10 A 164 TYR ASP ALA GLU ILE SER ARG LYS ARG GLU THR ARG THR SEQRES 11 A 164 ALA ARG GLU LEU TYR ALA ASN VAL VAL LEU GLY ASP ASP SEQRES 12 A 164 SER LEU ASN ASP CYS ARG ILE ILE PHE VAL ASP GLU VAL SEQRES 13 A 164 PHE LYS ILE GLU ARG PRO GLY GLU HET EDO A1001 4 HET EDO A1002 4 HET EDO A1003 4 HET SO4 A1004 5 HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 3(C2 H6 O2) FORMUL 5 SO4 O4 S 2- FORMUL 6 HOH *244(H2 O) HELIX 1 AA1 LEU A 178 ASP A 181 5 4 HELIX 2 AA2 TYR A 191 ASN A 194 5 4 HELIX 3 AA3 LYS A 213 LEU A 217 5 5 SHEET 1 AA1 5 TRP A 127 ASP A 128 0 SHEET 2 AA1 5 ALA A 150 ARG A 161 -1 O ARG A 161 N TRP A 127 SHEET 3 AA1 5 PHE A 237 GLU A 248 -1 O TRP A 238 N TRP A 151 SHEET 4 AA1 5 ARG A 253 VAL A 260 -1 O VAL A 260 N ASP A 240 SHEET 5 AA1 5 SER A 265 ILE A 271 -1 O CYS A 269 N ALA A 257 SHEET 1 AA2 4 TRP A 127 ASP A 128 0 SHEET 2 AA2 4 ALA A 150 ARG A 161 -1 O ARG A 161 N TRP A 127 SHEET 3 AA2 4 TYR A 140 ARG A 144 -1 N ALA A 143 O PHE A 152 SHEET 4 AA2 4 VAL A 204 ARG A 205 -1 O ARG A 205 N ASP A 142 SHEET 1 AA3 5 VAL A 196 ASN A 200 0 SHEET 2 AA3 5 ILE A 183 TYR A 188 -1 N VAL A 186 O VAL A 197 SHEET 3 AA3 5 ALA A 150 ARG A 161 -1 N VAL A 157 O HIS A 185 SHEET 4 AA3 5 PHE A 237 GLU A 248 -1 O TRP A 238 N TRP A 151 SHEET 5 AA3 5 VAL A 222 TYR A 227 -1 N LEU A 225 O TYR A 239 SITE 1 AC1 7 ASP A 142 GLU A 153 MET A 224 EDO A1002 SITE 2 AC1 7 HOH A1161 HOH A1270 HOH A1275 SITE 1 AC2 5 TRP A 238 EDO A1001 HOH A1143 HOH A1161 SITE 2 AC2 5 HOH A1169 SITE 1 AC3 6 ASP A 145 PHE A 152 ARG A 175 TYR A 191 SITE 2 AC3 6 ASN A 194 HOH A1257 SITE 1 AC4 7 ASN A 226 ARG A 235 TRP A 238 THR A 249 SITE 2 AC4 7 ARG A 250 HOH A1143 HOH A1204 CRYST1 38.790 60.004 68.903 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025780 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016666 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014513 0.00000