HEADER ISOMERASE 08-DEC-17 5YYC TITLE CRYSTAL STRUCTURE OF ALANINE RACEMASE FROM BACILLUS PSEUDOFIRMUS (OF4) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALANINE RACEMASE; COMPND 3 CHAIN: A, C; COMPND 4 EC: 5.1.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS PSEUDOFIRMUS (STRAIN OF4); SOURCE 3 ORGANISM_TAXID: 398511; SOURCE 4 STRAIN: OF4; SOURCE 5 GENE: ALR, BPOF4_09770; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K-12 KEYWDS ALANINE RACEMASE, ISOMERASE, BACILLUS PSEUDOFIRMUS (OF4) EXPDTA X-RAY DIFFRACTION AUTHOR H.DONG,T.T.HU,G.Z.HE,D.R.LU,J.X.QI,Y.S.DOU,W.LONG,X.HE,D.SU,J.S.JU REVDAT 1 02-JAN-19 5YYC 0 JRNL AUTH H.DONG,T.HU,G.HE,D.LU,J.QI,Y.DOU,W.LONG,X.HE,J.JU,D.SU JRNL TITL STRUCTURAL FEATURES AND KINETIC CHARACTERIZATION OF ALANINE JRNL TITL 2 RACEMASE FROM BACILLUS PSEUDOFIRMUS OF4. JRNL REF BIOCHEM. BIOPHYS. RES. V. 497 139 2018 JRNL REF 2 COMMUN. JRNL REFN ESSN 1090-2104 JRNL PMID 29427660 JRNL DOI 10.1016/J.BBRC.2018.02.041 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 98915 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 5003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.7673 - 5.5650 1.00 3352 182 0.2040 0.2348 REMARK 3 2 5.5650 - 4.4293 1.00 3251 148 0.1504 0.1863 REMARK 3 3 4.4293 - 3.8730 1.00 3217 162 0.1270 0.1485 REMARK 3 4 3.8730 - 3.5205 1.00 3177 175 0.1185 0.1438 REMARK 3 5 3.5205 - 3.2691 1.00 3147 192 0.1264 0.1556 REMARK 3 6 3.2691 - 3.0769 1.00 3192 163 0.1347 0.1612 REMARK 3 7 3.0769 - 2.9232 1.00 3151 153 0.1423 0.1553 REMARK 3 8 2.9232 - 2.7962 1.00 3155 144 0.1476 0.1860 REMARK 3 9 2.7962 - 2.6887 1.00 3135 174 0.1367 0.1550 REMARK 3 10 2.6887 - 2.5961 1.00 3135 187 0.1443 0.1386 REMARK 3 11 2.5961 - 2.5151 1.00 3139 177 0.1496 0.1886 REMARK 3 12 2.5151 - 2.4433 1.00 3081 177 0.1543 0.1747 REMARK 3 13 2.4433 - 2.3790 1.00 3159 156 0.1523 0.1996 REMARK 3 14 2.3790 - 2.3211 1.00 3129 155 0.1569 0.1747 REMARK 3 15 2.3211 - 2.2683 1.00 3088 181 0.1444 0.1836 REMARK 3 16 2.2683 - 2.2201 1.00 3038 217 0.1539 0.1884 REMARK 3 17 2.2201 - 2.1758 1.00 3201 162 0.1489 0.1554 REMARK 3 18 2.1758 - 2.1347 1.00 3073 188 0.1480 0.1698 REMARK 3 19 2.1347 - 2.0966 1.00 3108 146 0.1373 0.1551 REMARK 3 20 2.0966 - 2.0611 1.00 3124 144 0.1526 0.1550 REMARK 3 21 2.0611 - 2.0279 1.00 3075 179 0.1587 0.1678 REMARK 3 22 2.0279 - 1.9967 1.00 3106 171 0.1578 0.1619 REMARK 3 23 1.9967 - 1.9674 1.00 3155 145 0.1556 0.1849 REMARK 3 24 1.9674 - 1.9397 1.00 3086 158 0.1579 0.1835 REMARK 3 25 1.9397 - 1.9135 1.00 3078 182 0.1650 0.1855 REMARK 3 26 1.9135 - 1.8886 1.00 3115 180 0.1646 0.2065 REMARK 3 27 1.8886 - 1.8651 1.00 3132 134 0.1811 0.2203 REMARK 3 28 1.8651 - 1.8426 1.00 3080 149 0.1927 0.2176 REMARK 3 29 1.8426 - 1.8212 1.00 3166 159 0.2139 0.2749 REMARK 3 30 1.8212 - 1.8007 0.94 2867 163 0.2323 0.2612 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5780 REMARK 3 ANGLE : 1.067 7828 REMARK 3 CHIRALITY : 0.046 904 REMARK 3 PLANARITY : 0.005 1008 REMARK 3 DIHEDRAL : 13.739 2116 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -6.1296 30.3570 -14.1296 REMARK 3 T TENSOR REMARK 3 T11: 0.1606 T22: 0.1604 REMARK 3 T33: 0.1715 T12: 0.0172 REMARK 3 T13: 0.0149 T23: 0.0143 REMARK 3 L TENSOR REMARK 3 L11: 0.3572 L22: 0.3590 REMARK 3 L33: 0.4900 L12: 0.1680 REMARK 3 L13: 0.1891 L23: 0.1909 REMARK 3 S TENSOR REMARK 3 S11: -0.0078 S12: -0.0082 S13: -0.0052 REMARK 3 S21: -0.0086 S22: -0.0084 S23: -0.0052 REMARK 3 S31: -0.0067 S32: -0.0095 S33: 0.0213 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YYC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1300005944. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : OXFORD ONYX CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99024 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 35.7960 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.58600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4M SODIUM/POTASSIUM PHOSPHATE PH REMARK 280 8.2, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.65050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.28450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.65700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.28450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.65050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.65700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 369 REMARK 465 ASN C 369 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLN A 16 OE2 GLU A 368 2.09 REMARK 500 O HOH A 836 O HOH A 890 2.14 REMARK 500 O HOH C 523 O HOH C 868 2.14 REMARK 500 O HOH A 516 O HOH A 886 2.14 REMARK 500 O HOH A 546 O HOH A 850 2.15 REMARK 500 O HOH C 502 O HOH C 739 2.16 REMARK 500 O HOH A 511 O HOH A 560 2.17 REMARK 500 O HOH A 737 O HOH A 890 2.18 REMARK 500 OE2 GLU C 345 O HOH C 501 2.18 REMARK 500 O HOH C 513 O HOH C 570 2.19 REMARK 500 O HOH C 501 O HOH C 882 2.19 REMARK 500 O HOH A 668 O HOH A 700 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 108 13.22 -147.57 REMARK 500 GLU A 124 -74.76 -74.42 REMARK 500 ARG A 139 -77.87 -120.65 REMARK 500 GLU A 172 52.11 -155.23 REMARK 500 CYS A 207 -20.97 -147.54 REMARK 500 LEU A 221 -130.85 47.41 REMARK 500 SER A 253 -157.72 -135.20 REMARK 500 SER A 268 -171.84 70.64 REMARK 500 ASN A 298 19.30 56.66 REMARK 500 LYS A 299 -27.07 -146.16 REMARK 500 THR A 349 -158.47 -130.62 REMARK 500 GLU A 367 37.46 -91.43 REMARK 500 PHE C 108 14.36 -146.71 REMARK 500 SER C 121 -22.86 -37.59 REMARK 500 GLU C 122 -123.70 -88.64 REMARK 500 ALA C 123 142.00 40.43 REMARK 500 ARG C 139 -78.05 -120.64 REMARK 500 GLU C 172 51.82 -155.58 REMARK 500 CYS C 207 -21.14 -148.30 REMARK 500 LEU C 221 -132.01 48.09 REMARK 500 SER C 253 -156.06 -133.06 REMARK 500 SER C 268 -172.69 71.22 REMARK 500 ASN C 298 18.32 57.62 REMARK 500 LYS C 299 -26.67 -145.69 REMARK 500 THR C 349 -158.34 -128.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 950 DISTANCE = 6.62 ANGSTROMS REMARK 525 HOH A 951 DISTANCE = 7.79 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PLP C 401 and LYS C REMARK 800 41 DBREF 5YYC A 1 369 UNP D3FSP1 D3FSP1_BACPE 1 369 DBREF 5YYC C 1 369 UNP D3FSP1 D3FSP1_BACPE 1 369 SEQRES 1 A 369 MET LYS THR SER SER PHE ARG ASN THR TYR ALA GLN ILE SEQRES 2 A 369 SER LEU GLN ALA LEU LYS GLU ASN ALA ALA SER PHE LYS SEQRES 3 A 369 ALA SER LEU GLN SER PRO ALA CYS ARG LEU MET ALA VAL SEQRES 4 A 369 VAL LYS GLY ASP GLY TYR GLY HIS GLY ALA VAL ALA ALA SEQRES 5 A 369 ALA SER SER ALA LEU ASN GLY GLY ALA ASP TYR LEU GLY SEQRES 6 A 369 VAL ALA ILE LEU ASP GLU ALA ILE GLU LEU ARG ASP ALA SEQRES 7 A 369 GLY VAL GLU ALA PRO ILE LEU VAL LEU GLY TYR THR SER SEQRES 8 A 369 PRO HIS ALA LEU ARG GLU ALA ILE SER ARG ASN ILE THR SEQRES 9 A 369 LEU THR VAL PHE SER THR ASP VAL ARG ASP ALA LEU LEU SEQRES 10 A 369 GLU VAL ALA SER GLU ALA GLU SER PRO ILE LYS VAL HIS SEQRES 11 A 369 ILE LYS THR GLU THR GLY MET GLY ARG VAL GLY VAL GLN SEQRES 12 A 369 THR LYS GLU GLU LEU LEU ASP VAL MET THR PRO LEU TYR SEQRES 13 A 369 HIS HIS ASN ASN ILE GLU VAL GLU GLY ILE PHE THR HIS SEQRES 14 A 369 PHE ALA GLU ALA ASP ASN LEU GLN SER THR TYR THR ASP SEQRES 15 A 369 GLU GLN PHE ALA ARG PHE LEU SER PHE ILE GLU ALA ILE SEQRES 16 A 369 GLU LYS ASP ASP MET HIS VAL PRO ILE LYS HIS CYS CYS SEQRES 17 A 369 ASN SER ALA GLY THR LEU PHE HIS LYS ASP LYS HIS LEU SEQRES 18 A 369 ASP MET VAL ARG VAL GLY ILE SER LEU TYR GLY LEU ARG SEQRES 19 A 369 PRO ASP VAL SER LEU GLU PHE PRO ILE GLU LEU THR GLN SEQRES 20 A 369 ALA MET ARG LEU PHE SER SER ILE VAL SER LEU ARG LYS SEQRES 21 A 369 LEU PRO GLU GLY SER SER ILE SER TYR GLY ARG THR HIS SEQRES 22 A 369 LYS LEU SER SER GLU LYS VAL VAL ALA THR MET PRO ILE SEQRES 23 A 369 GLY TYR ALA ASP GLY LEU SER ARG ALA LEU SER ASN LYS SEQRES 24 A 369 GLY PHE VAL THR LEU HIS GLY GLN LYS ALA PRO ILE LEU SEQRES 25 A 369 GLY ARG VAL CYS MET ASP GLN THR MET ILE ASP VAL THR SEQRES 26 A 369 ASP ILE PRO ASP ALA ALA LEU GLY ASP HIS VAL GLU PHE SEQRES 27 A 369 PRO ILE ASP GLU MET ALA GLU LEU THR GLY THR ILE ASN SEQRES 28 A 369 TYR GLU ILE VAL CYS ALA VAL SER LYS ARG VAL PRO ARG SEQRES 29 A 369 TYR TYR GLU GLU ASN SEQRES 1 C 369 MET LYS THR SER SER PHE ARG ASN THR TYR ALA GLN ILE SEQRES 2 C 369 SER LEU GLN ALA LEU LYS GLU ASN ALA ALA SER PHE LYS SEQRES 3 C 369 ALA SER LEU GLN SER PRO ALA CYS ARG LEU MET ALA VAL SEQRES 4 C 369 VAL LYS GLY ASP GLY TYR GLY HIS GLY ALA VAL ALA ALA SEQRES 5 C 369 ALA SER SER ALA LEU ASN GLY GLY ALA ASP TYR LEU GLY SEQRES 6 C 369 VAL ALA ILE LEU ASP GLU ALA ILE GLU LEU ARG ASP ALA SEQRES 7 C 369 GLY VAL GLU ALA PRO ILE LEU VAL LEU GLY TYR THR SER SEQRES 8 C 369 PRO HIS ALA LEU ARG GLU ALA ILE SER ARG ASN ILE THR SEQRES 9 C 369 LEU THR VAL PHE SER THR ASP VAL ARG ASP ALA LEU LEU SEQRES 10 C 369 GLU VAL ALA SER GLU ALA GLU SER PRO ILE LYS VAL HIS SEQRES 11 C 369 ILE LYS THR GLU THR GLY MET GLY ARG VAL GLY VAL GLN SEQRES 12 C 369 THR LYS GLU GLU LEU LEU ASP VAL MET THR PRO LEU TYR SEQRES 13 C 369 HIS HIS ASN ASN ILE GLU VAL GLU GLY ILE PHE THR HIS SEQRES 14 C 369 PHE ALA GLU ALA ASP ASN LEU GLN SER THR TYR THR ASP SEQRES 15 C 369 GLU GLN PHE ALA ARG PHE LEU SER PHE ILE GLU ALA ILE SEQRES 16 C 369 GLU LYS ASP ASP MET HIS VAL PRO ILE LYS HIS CYS CYS SEQRES 17 C 369 ASN SER ALA GLY THR LEU PHE HIS LYS ASP LYS HIS LEU SEQRES 18 C 369 ASP MET VAL ARG VAL GLY ILE SER LEU TYR GLY LEU ARG SEQRES 19 C 369 PRO ASP VAL SER LEU GLU PHE PRO ILE GLU LEU THR GLN SEQRES 20 C 369 ALA MET ARG LEU PHE SER SER ILE VAL SER LEU ARG LYS SEQRES 21 C 369 LEU PRO GLU GLY SER SER ILE SER TYR GLY ARG THR HIS SEQRES 22 C 369 LYS LEU SER SER GLU LYS VAL VAL ALA THR MET PRO ILE SEQRES 23 C 369 GLY TYR ALA ASP GLY LEU SER ARG ALA LEU SER ASN LYS SEQRES 24 C 369 GLY PHE VAL THR LEU HIS GLY GLN LYS ALA PRO ILE LEU SEQRES 25 C 369 GLY ARG VAL CYS MET ASP GLN THR MET ILE ASP VAL THR SEQRES 26 C 369 ASP ILE PRO ASP ALA ALA LEU GLY ASP HIS VAL GLU PHE SEQRES 27 C 369 PRO ILE ASP GLU MET ALA GLU LEU THR GLY THR ILE ASN SEQRES 28 C 369 TYR GLU ILE VAL CYS ALA VAL SER LYS ARG VAL PRO ARG SEQRES 29 C 369 TYR TYR GLU GLU ASN HET PLP A 401 15 HET PLP C 401 15 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 3 PLP 2(C8 H10 N O6 P) FORMUL 5 HOH *893(H2 O) HELIX 1 AA1 SER A 14 SER A 28 1 15 HELIX 2 AA2 VAL A 40 GLY A 46 1 7 HELIX 3 AA3 GLY A 48 GLY A 59 1 12 HELIX 4 AA4 ILE A 68 ALA A 78 1 11 HELIX 5 AA5 SER A 91 HIS A 93 5 3 HELIX 6 AA6 ALA A 94 ARG A 101 1 8 HELIX 7 AA7 SER A 109 SER A 121 1 13 HELIX 8 AA8 THR A 144 HIS A 157 1 14 HELIX 9 AA9 THR A 179 ASP A 198 1 20 HELIX 10 AB1 ASN A 209 HIS A 216 1 8 HELIX 11 AB2 LYS A 217 HIS A 220 5 4 HELIX 12 AB3 GLY A 227 GLY A 232 5 6 HELIX 13 AB4 SER A 268 THR A 272 5 5 HELIX 14 AB5 GLY A 287 GLY A 291 5 5 HELIX 15 AB6 SER A 293 SER A 297 5 5 HELIX 16 AB7 PRO A 339 THR A 347 1 9 HELIX 17 AB8 ILE A 350 VAL A 358 1 9 HELIX 18 AB9 SER C 14 LEU C 29 1 16 HELIX 19 AC1 VAL C 40 GLY C 46 1 7 HELIX 20 AC2 GLY C 48 GLY C 59 1 12 HELIX 21 AC3 ILE C 68 ALA C 78 1 11 HELIX 22 AC4 SER C 91 HIS C 93 5 3 HELIX 23 AC5 ALA C 94 ARG C 101 1 8 HELIX 24 AC6 SER C 109 SER C 121 1 13 HELIX 25 AC7 THR C 144 HIS C 157 1 14 HELIX 26 AC8 THR C 179 ASP C 198 1 20 HELIX 27 AC9 ASN C 209 HIS C 216 1 8 HELIX 28 AD1 LYS C 217 HIS C 220 5 4 HELIX 29 AD2 GLY C 227 GLY C 232 5 6 HELIX 30 AD3 SER C 268 THR C 272 5 5 HELIX 31 AD4 GLY C 287 GLY C 291 5 5 HELIX 32 AD5 SER C 293 SER C 297 5 5 HELIX 33 AD6 PRO C 339 THR C 347 1 9 HELIX 34 AD7 ILE C 350 VAL C 358 1 9 SHEET 1 AA1 4 HIS A 335 PHE A 338 0 SHEET 2 AA1 4 MET A 249 SER A 254 -1 N LEU A 251 O PHE A 338 SHEET 3 AA1 4 TYR A 10 ILE A 13 -1 N GLN A 12 O ARG A 250 SHEET 4 AA1 4 ARG A 364 TYR A 366 1 O TYR A 365 N ILE A 13 SHEET 1 AA2 9 ARG A 35 VAL A 39 0 SHEET 2 AA2 9 TYR A 63 VAL A 66 1 O TYR A 63 N ALA A 38 SHEET 3 AA2 9 ILE A 84 VAL A 86 1 O LEU A 85 N LEU A 64 SHEET 4 AA2 9 THR A 104 VAL A 107 1 O THR A 104 N ILE A 84 SHEET 5 AA2 9 ILE A 127 LYS A 132 1 O HIS A 130 N LEU A 105 SHEET 6 AA2 9 ILE A 161 PHE A 167 1 O GLU A 162 N ILE A 127 SHEET 7 AA2 9 ILE A 204 CYS A 208 1 O HIS A 206 N ILE A 166 SHEET 8 AA2 9 MET A 223 VAL A 226 1 O ARG A 225 N CYS A 208 SHEET 9 AA2 9 ARG A 35 VAL A 39 1 N MET A 37 O VAL A 224 SHEET 1 AA3 5 SER A 257 LEU A 261 0 SHEET 2 AA3 5 LYS A 279 MET A 284 -1 O VAL A 281 N ARG A 259 SHEET 3 AA3 5 THR A 320 ASP A 323 -1 O THR A 320 N MET A 284 SHEET 4 AA3 5 GLN A 307 LEU A 312 -1 N LEU A 312 O MET A 321 SHEET 5 AA3 5 PHE A 301 LEU A 304 -1 N VAL A 302 O ALA A 309 SHEET 1 AA4 2 SER A 266 ILE A 267 0 SHEET 2 AA4 2 HIS A 273 LYS A 274 -1 O HIS A 273 N ILE A 267 SHEET 1 AA5 4 HIS C 335 PHE C 338 0 SHEET 2 AA5 4 MET C 249 SER C 254 -1 N LEU C 251 O PHE C 338 SHEET 3 AA5 4 TYR C 10 ILE C 13 -1 N GLN C 12 O ARG C 250 SHEET 4 AA5 4 ARG C 364 TYR C 366 1 O TYR C 365 N ILE C 13 SHEET 1 AA6 9 ARG C 35 VAL C 39 0 SHEET 2 AA6 9 TYR C 63 VAL C 66 1 O TYR C 63 N ALA C 38 SHEET 3 AA6 9 ILE C 84 VAL C 86 1 O LEU C 85 N LEU C 64 SHEET 4 AA6 9 THR C 104 VAL C 107 1 O THR C 104 N ILE C 84 SHEET 5 AA6 9 ILE C 127 LYS C 132 1 O HIS C 130 N VAL C 107 SHEET 6 AA6 9 ILE C 161 PHE C 167 1 O GLU C 162 N ILE C 127 SHEET 7 AA6 9 ILE C 204 CYS C 208 1 O HIS C 206 N ILE C 166 SHEET 8 AA6 9 MET C 223 VAL C 226 1 O ARG C 225 N CYS C 208 SHEET 9 AA6 9 ARG C 35 VAL C 39 1 N MET C 37 O VAL C 224 SHEET 1 AA7 5 SER C 257 LEU C 261 0 SHEET 2 AA7 5 LYS C 279 MET C 284 -1 O VAL C 281 N ARG C 259 SHEET 3 AA7 5 THR C 320 ASP C 323 -1 O THR C 320 N MET C 284 SHEET 4 AA7 5 GLN C 307 LEU C 312 -1 N LEU C 312 O MET C 321 SHEET 5 AA7 5 PHE C 301 LEU C 304 -1 N VAL C 302 O ALA C 309 SHEET 1 AA8 2 SER C 266 ILE C 267 0 SHEET 2 AA8 2 HIS C 273 LYS C 274 -1 O HIS C 273 N ILE C 267 LINK NZ LYS A 41 C4A PLP A 401 1555 1555 1.25 LINK NZ LYS C 41 C4A PLP C 401 1555 1555 1.37 SITE 1 AC1 14 LYS A 41 TYR A 45 ARG A 139 HIS A 169 SITE 2 AC1 14 ASN A 209 SER A 210 ARG A 225 GLY A 227 SITE 3 AC1 14 ILE A 228 TYR A 352 HOH A 553 HOH A 578 SITE 4 AC1 14 HOH A 693 HOH C 519 SITE 1 AC2 22 ASP A 318 HOH A 512 HOH A 706 VAL C 39 SITE 2 AC2 22 VAL C 40 GLY C 42 ASP C 43 GLY C 44 SITE 3 AC2 22 TYR C 45 GLY C 65 ALA C 67 GLU C 71 SITE 4 AC2 22 ARG C 139 HIS C 169 ASN C 209 SER C 210 SITE 5 AC2 22 ARG C 225 GLY C 227 ILE C 228 TYR C 352 SITE 6 AC2 22 HOH C 579 HOH C 591 CRYST1 97.301 97.314 112.569 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010277 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010276 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008883 0.00000