HEADER IMMUNE SYSTEM 15-DEC-17 5YZP TITLE CRYSTAL STRUCTURE OF P204 HINA DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: IFI204; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 237-438; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS DOMESTICUS; SOURCE 3 ORGANISM_COMMON: WESTERN EUROPEAN HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10092; SOURCE 5 GENE: IFI204; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS DNA SENSOR, PATTERN RECOGNITION RECEPTORS, TYPE I-IFN, PYHIN FAMILY, KEYWDS 2 AIM-2 LIKE RECEPTORS, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR T.JIN REVDAT 4 22-NOV-23 5YZP 1 REMARK REVDAT 3 10-MAR-21 5YZP 1 JRNL REVDAT 2 28-AUG-19 5YZP 1 REMARK REVDAT 1 19-DEC-18 5YZP 0 JRNL AUTH X.FAN,J.JIANG,D.ZHAO,F.CHEN,H.MA,P.SMITH,L.UNTERHOLZNER, JRNL AUTH 2 T.S.XIAO,T.JIN JRNL TITL STRUCTURAL MECHANISM OF DNA RECOGNITION BY THE P204 HIN JRNL TITL 2 DOMAIN. JRNL REF NUCLEIC ACIDS RES. 2021 JRNL REFN ESSN 1362-4962 JRNL PMID 33619523 JRNL DOI 10.1093/NAR/GKAB076 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2481: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 37536 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.810 REMARK 3 FREE R VALUE TEST SET COUNT : 1807 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.1950 - 3.7168 0.97 2885 97 0.1653 0.1629 REMARK 3 2 3.7168 - 2.9503 1.00 2796 153 0.1669 0.1919 REMARK 3 3 2.9503 - 2.5774 1.00 2761 159 0.1926 0.2421 REMARK 3 4 2.5774 - 2.3418 1.00 2802 113 0.1976 0.2344 REMARK 3 5 2.3418 - 2.1739 1.00 2778 131 0.1869 0.2107 REMARK 3 6 2.1739 - 2.0458 1.00 2713 168 0.1795 0.2074 REMARK 3 7 2.0458 - 1.9433 1.00 2735 135 0.1816 0.2061 REMARK 3 8 1.9433 - 1.8587 1.00 2736 147 0.1866 0.2148 REMARK 3 9 1.8587 - 1.7872 1.00 2757 128 0.1875 0.2147 REMARK 3 10 1.7872 - 1.7255 1.00 2736 141 0.2053 0.2294 REMARK 3 11 1.7255 - 1.6715 1.00 2717 148 0.2376 0.2837 REMARK 3 12 1.6715 - 1.6238 1.00 2725 138 0.2721 0.3092 REMARK 3 13 1.6238 - 1.5810 0.96 2588 149 0.3282 0.3571 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1633 REMARK 3 ANGLE : 0.843 2206 REMARK 3 CHIRALITY : 0.056 250 REMARK 3 PLANARITY : 0.005 280 REMARK 3 DIHEDRAL : 5.647 1358 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 221 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5019 -16.8228 -0.8669 REMARK 3 T TENSOR REMARK 3 T11: 0.2102 T22: 0.1817 REMARK 3 T33: 0.2435 T12: 0.0113 REMARK 3 T13: -0.0182 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.3687 L22: 0.1805 REMARK 3 L33: 0.3216 L12: -0.1793 REMARK 3 L13: 0.0754 L23: 0.1428 REMARK 3 S TENSOR REMARK 3 S11: -0.0481 S12: 0.0010 S13: -0.0635 REMARK 3 S21: 0.0689 S22: 0.0857 S23: -0.0044 REMARK 3 S31: 0.0772 S32: -0.0134 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 237 THROUGH 268 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6657 -18.3055 -1.9689 REMARK 3 T TENSOR REMARK 3 T11: 0.1992 T22: 0.2021 REMARK 3 T33: 0.2043 T12: -0.0337 REMARK 3 T13: 0.0045 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.7049 L22: 0.7261 REMARK 3 L33: -0.1282 L12: 0.2670 REMARK 3 L13: -0.0420 L23: -0.1125 REMARK 3 S TENSOR REMARK 3 S11: 0.0694 S12: -0.1199 S13: 0.1126 REMARK 3 S21: 0.0549 S22: -0.0004 S23: 0.1104 REMARK 3 S31: 0.0421 S32: 0.0453 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 269 THROUGH 281 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1487 -9.8869 3.8064 REMARK 3 T TENSOR REMARK 3 T11: 0.2605 T22: 0.2410 REMARK 3 T33: 0.2425 T12: -0.0174 REMARK 3 T13: 0.0170 T23: -0.0441 REMARK 3 L TENSOR REMARK 3 L11: 0.4219 L22: 0.1521 REMARK 3 L33: 0.2506 L12: -0.0758 REMARK 3 L13: 0.2660 L23: 0.0940 REMARK 3 S TENSOR REMARK 3 S11: 0.1015 S12: -0.4069 S13: 0.1161 REMARK 3 S21: 0.2798 S22: -0.2920 S23: 0.1443 REMARK 3 S31: -0.1511 S32: 0.0112 S33: -0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 282 THROUGH 315 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8416 -14.7578 1.7784 REMARK 3 T TENSOR REMARK 3 T11: 0.2351 T22: 0.1988 REMARK 3 T33: 0.2077 T12: -0.0010 REMARK 3 T13: -0.0108 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.4750 L22: 0.7479 REMARK 3 L33: 0.5456 L12: -0.7958 REMARK 3 L13: 0.4362 L23: -0.5921 REMARK 3 S TENSOR REMARK 3 S11: -0.0991 S12: -0.0781 S13: -0.0256 REMARK 3 S21: 0.1575 S22: 0.1168 S23: -0.1356 REMARK 3 S31: 0.0338 S32: 0.0312 S33: 0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 316 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1415 -12.3985 -19.6993 REMARK 3 T TENSOR REMARK 3 T11: 0.3055 T22: 0.2638 REMARK 3 T33: 0.2192 T12: -0.0465 REMARK 3 T13: 0.0174 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 0.3001 L22: 0.1099 REMARK 3 L33: 0.3520 L12: -0.1315 REMARK 3 L13: 0.3459 L23: -0.2211 REMARK 3 S TENSOR REMARK 3 S11: -0.0048 S12: 0.0781 S13: 0.2031 REMARK 3 S21: 0.1120 S22: -0.0130 S23: 0.1479 REMARK 3 S31: -0.1340 S32: -0.0147 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 334 THROUGH 351 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4635 -18.7874 -19.4022 REMARK 3 T TENSOR REMARK 3 T11: 0.2532 T22: 0.2851 REMARK 3 T33: 0.2561 T12: -0.0316 REMARK 3 T13: -0.0235 T23: 0.0776 REMARK 3 L TENSOR REMARK 3 L11: 0.4517 L22: 0.0464 REMARK 3 L33: 0.7600 L12: 0.1390 REMARK 3 L13: -0.5700 L23: -0.1693 REMARK 3 S TENSOR REMARK 3 S11: -0.0442 S12: 0.1492 S13: 0.0837 REMARK 3 S21: -0.1563 S22: 0.1748 S23: 0.0066 REMARK 3 S31: 0.1861 S32: -0.2521 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 352 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.9670 -18.8536 -18.2680 REMARK 3 T TENSOR REMARK 3 T11: 0.2521 T22: 0.3847 REMARK 3 T33: 0.2471 T12: -0.0313 REMARK 3 T13: 0.0295 T23: 0.0773 REMARK 3 L TENSOR REMARK 3 L11: 0.8019 L22: 0.2300 REMARK 3 L33: 0.1040 L12: -0.0743 REMARK 3 L13: 0.1668 L23: 0.0668 REMARK 3 S TENSOR REMARK 3 S11: 0.0122 S12: 0.4617 S13: 0.2146 REMARK 3 S21: -0.0360 S22: 0.1541 S23: 0.1209 REMARK 3 S31: 0.1065 S32: -0.5247 S33: 0.0024 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 385 THROUGH 403 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4991 -23.8561 -18.6372 REMARK 3 T TENSOR REMARK 3 T11: 0.3505 T22: 0.2869 REMARK 3 T33: 0.2261 T12: -0.0795 REMARK 3 T13: -0.0178 T23: -0.0037 REMARK 3 L TENSOR REMARK 3 L11: 2.2671 L22: 0.8273 REMARK 3 L33: 1.2303 L12: -0.3894 REMARK 3 L13: 0.0221 L23: -0.9936 REMARK 3 S TENSOR REMARK 3 S11: -0.0855 S12: 0.3189 S13: -0.2331 REMARK 3 S21: -0.2023 S22: 0.1514 S23: 0.1508 REMARK 3 S31: 0.3350 S32: -0.2803 S33: -0.0225 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 404 THROUGH 415 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8193 -15.1164 -10.3295 REMARK 3 T TENSOR REMARK 3 T11: 0.3172 T22: 0.2818 REMARK 3 T33: 0.2796 T12: 0.0154 REMARK 3 T13: 0.0009 T23: 0.0367 REMARK 3 L TENSOR REMARK 3 L11: 0.5685 L22: 0.3233 REMARK 3 L33: 0.4437 L12: 0.0290 REMARK 3 L13: -0.2879 L23: 0.0090 REMARK 3 S TENSOR REMARK 3 S11: -0.0062 S12: 0.0572 S13: 0.2349 REMARK 3 S21: -0.1012 S22: 0.0441 S23: 0.0502 REMARK 3 S31: -0.2292 S32: -0.3276 S33: 0.0038 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YZP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1300006186. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37551 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 7.660 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2OQ0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23% PEG4000, 0.2M AMMONIUM ACETATE, REMARK 280 100 MM NAACO PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.21000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.21000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 28.96500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.10500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 28.96500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.10500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 45.21000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 28.96500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 52.10500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 45.21000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 28.96500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 52.10500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 634 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 699 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 777 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 212 REMARK 465 SER A 213 REMARK 465 VAL A 214 REMARK 465 ASP A 215 REMARK 465 GLN A 216 REMARK 465 ASN A 217 REMARK 465 ILE A 218 REMARK 465 PRO A 219 REMARK 465 ARG A 220 REMARK 465 GLY A 416 REMARK 465 ASN A 417 REMARK 465 ALA A 418 REMARK 465 ALA A 419 REMARK 465 ALA A 420 REMARK 465 SER A 421 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 352 -150.98 -92.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 792 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH A 793 DISTANCE = 6.64 ANGSTROMS REMARK 525 HOH A 794 DISTANCE = 7.85 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 504 DBREF1 5YZP A 216 417 UNP A0A1Z3MI45_MOUSE DBREF2 5YZP A A0A1Z3MI45 237 438 SEQADV 5YZP GLY A 212 UNP A0A1Z3MI4 EXPRESSION TAG SEQADV 5YZP SER A 213 UNP A0A1Z3MI4 EXPRESSION TAG SEQADV 5YZP VAL A 214 UNP A0A1Z3MI4 EXPRESSION TAG SEQADV 5YZP ASP A 215 UNP A0A1Z3MI4 EXPRESSION TAG SEQADV 5YZP ALA A 418 UNP A0A1Z3MI4 EXPRESSION TAG SEQADV 5YZP ALA A 419 UNP A0A1Z3MI4 EXPRESSION TAG SEQADV 5YZP ALA A 420 UNP A0A1Z3MI4 EXPRESSION TAG SEQADV 5YZP SER A 421 UNP A0A1Z3MI4 EXPRESSION TAG SEQRES 1 A 210 GLY SER VAL ASP GLN ASN ILE PRO ARG GLY ALA VAL LEU SEQRES 2 A 210 HIS SER GLU PRO LEU THR VAL MET VAL LEU THR ALA THR SEQRES 3 A 210 ASP PRO PHE GLU TYR GLU SER PRO GLU HIS GLU VAL LYS SEQRES 4 A 210 ASN MET LEU HIS ALA THR VAL ALA THR VAL SER GLN TYR SEQRES 5 A 210 PHE HIS VAL LYS VAL PHE ASN ILE ASN LEU LYS GLU LYS SEQRES 6 A 210 PHE THR LYS LYS ASN PHE ILE ILE ILE SER ASN TYR PHE SEQRES 7 A 210 GLU SER LYS GLY ILE LEU GLU ILE ASN GLU THR SER SER SEQRES 8 A 210 VAL LEU GLU ALA ALA PRO ASP GLN MET ILE GLU VAL PRO SEQRES 9 A 210 ASN SER ILE ILE ARG ASN ALA ASN ALA SER PRO LYS ILE SEQRES 10 A 210 CYS ASP ILE GLN LYS GLY THR SER GLY ALA VAL PHE TYR SEQRES 11 A 210 GLY VAL PHE THR LEU HIS LYS LYS THR VAL ASN ARG LYS SEQRES 12 A 210 ASN THR ILE TYR GLU ILE LYS ASP GLY SER GLY SER ILE SEQRES 13 A 210 GLU VAL VAL GLY SER GLY LYS TRP HIS ASN ILE ASN CYS SEQRES 14 A 210 LYS GLU GLY ASP LYS LEU HIS LEU PHE CYS PHE HIS LEU SEQRES 15 A 210 LYS THR ILE ASP ARG GLN PRO LYS LEU VAL CYS GLY GLU SEQRES 16 A 210 HIS SER PHE ILE LYS ILE SER LYS ARG GLY ASN ALA ALA SEQRES 17 A 210 ALA SER HET EDO A 501 4 HET EDO A 502 4 HET ACT A 503 4 HET EDO A 504 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM ACT ACETATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 3(C2 H6 O2) FORMUL 4 ACT C2 H3 O2 1- FORMUL 6 HOH *194(H2 O) HELIX 1 AA1 ASN A 270 LYS A 274 5 5 HELIX 2 AA2 ALA A 307 MET A 311 5 5 HELIX 3 AA3 PRO A 315 ALA A 324 1 10 HELIX 4 AA4 LYS A 327 GLN A 332 1 6 HELIX 5 AA5 SER A 372 HIS A 376 5 5 SHEET 1 AA1 6 VAL A 223 HIS A 225 0 SHEET 2 AA1 6 TYR A 288 SER A 291 -1 O TYR A 288 N HIS A 225 SHEET 3 AA1 6 ILE A 294 ILE A 297 -1 O GLU A 296 N PHE A 289 SHEET 4 AA1 6 TYR A 263 VAL A 268 1 N LYS A 267 O LEU A 295 SHEET 5 AA1 6 VAL A 249 ALA A 258 -1 N ALA A 255 O VAL A 266 SHEET 6 AA1 6 PHE A 240 GLU A 243 -1 N TYR A 242 O LYS A 250 SHEET 1 AA2 8 VAL A 223 HIS A 225 0 SHEET 2 AA2 8 TYR A 288 SER A 291 -1 O TYR A 288 N HIS A 225 SHEET 3 AA2 8 ILE A 294 ILE A 297 -1 O GLU A 296 N PHE A 289 SHEET 4 AA2 8 TYR A 263 VAL A 268 1 N LYS A 267 O LEU A 295 SHEET 5 AA2 8 VAL A 249 ALA A 258 -1 N ALA A 255 O VAL A 266 SHEET 6 AA2 8 LEU A 229 ALA A 236 -1 N LEU A 234 O THR A 256 SHEET 7 AA2 8 PHE A 282 SER A 286 -1 O ILE A 283 N VAL A 231 SHEET 8 AA2 8 SER A 302 GLU A 305 -1 O LEU A 304 N ILE A 284 SHEET 1 AA3 7 PHE A 409 SER A 413 0 SHEET 2 AA3 7 LYS A 385 THR A 395 -1 N HIS A 387 O LYS A 411 SHEET 3 AA3 7 PRO A 400 VAL A 403 -1 O VAL A 403 N HIS A 392 SHEET 4 AA3 7 GLY A 365 GLY A 371 1 N VAL A 370 O LEU A 402 SHEET 5 AA3 7 THR A 356 ASP A 362 -1 N TYR A 358 O VAL A 369 SHEET 6 AA3 7 VAL A 339 VAL A 351 -1 N LYS A 348 O GLU A 359 SHEET 7 AA3 7 LYS A 385 THR A 395 -1 O LEU A 388 N GLY A 342 SITE 1 AC1 5 HIS A 225 HIS A 247 PHE A 264 TYR A 288 SITE 2 AC1 5 ACT A 503 SITE 1 AC2 7 LYS A 267 CYS A 390 HIS A 392 GLY A 405 SITE 2 AC2 7 GLU A 406 HIS A 407 HOH A 730 SITE 1 AC3 4 THR A 259 SER A 261 EDO A 501 HOH A 606 SITE 1 AC4 5 PRO A 228 LEU A 229 THR A 230 HOH A 614 SITE 2 AC4 5 HOH A 722 CRYST1 57.930 104.210 90.420 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017262 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009596 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011060 0.00000