HEADER METAL BINDING PROTEIN 02-JAN-18 5Z2J TITLE STRUCTURE OF S38A MUTANT METAL-FREE PERIPLASMIC METAL BINDING PROTEIN TITLE 2 FROM CANDIDATUS LIBERIBACTER ASIATICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC SOLUTE BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LIBERIBACTER ASIATICUS (STRAIN PSY62); SOURCE 3 ORGANISM_TAXID: 537021; SOURCE 4 STRAIN: PSY62; SOURCE 5 GENE: CLIBASIA_02120; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS ABC TRANSPORTER PERIPLASMIC SOLUTE BINDING PROTEIN, METAL BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.SAINI,N.SHARMA,V.DALAL,P.KUMAR,A.K.SHARMA REVDAT 3 22-NOV-23 5Z2J 1 COMPND REVDAT 2 10-OCT-18 5Z2J 1 COMPND JRNL REVDAT 1 03-OCT-18 5Z2J 0 JRNL AUTH G.SAINI,N.SHARMA,V.DALAL,A.WARGHANE,D.K.GHOSH,P.KUMAR, JRNL AUTH 2 A.K.SHARMA JRNL TITL THE ANALYSIS OF SUBTLE INTERNAL COMMUNICATIONS THROUGH JRNL TITL 2 MUTATION STUDIES IN PERIPLASMIC METAL UPTAKE PROTEIN JRNL TITL 3 CLAS-ZNUA2 JRNL REF J. STRUCT. BIOL. V. 204 228 2018 JRNL REFN ESSN 1095-8657 JRNL PMID 30125692 JRNL DOI 10.1016/J.JSB.2018.08.013 REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 81.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 38248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1885 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.87 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.92 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2625 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.3070 REMARK 3 BIN FREE R VALUE SET COUNT : 137 REMARK 3 BIN FREE R VALUE : 0.3530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2133 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 89 REMARK 3 SOLVENT ATOMS : 324 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 0.07000 REMARK 3 B33 (A**2) : -0.22000 REMARK 3 B12 (A**2) : 0.03000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.094 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.097 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.398 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2384 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2245 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3229 ; 1.904 ; 1.998 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5233 ; 1.066 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 297 ; 6.986 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 97 ;37.489 ;24.536 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 418 ;13.352 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;18.164 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 377 ; 0.125 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2591 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 449 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1146 ; 3.151 ; 1.501 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1137 ; 2.686 ; 1.461 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1435 ; 4.206 ; 2.190 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1436 ; 4.225 ; 2.194 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1237 ; 4.865 ; 2.051 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1238 ; 4.864 ; 2.056 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1789 ; 6.963 ; 2.869 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2891 ;10.347 ;21.240 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2892 ;10.346 ;21.270 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 275 REMARK 3 ORIGIN FOR THE GROUP (A): -38.0790 -11.7040 5.0150 REMARK 3 T TENSOR REMARK 3 T11: 0.0694 T22: 0.0440 REMARK 3 T33: 0.0187 T12: 0.0019 REMARK 3 T13: 0.0118 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 2.0570 L22: 1.0064 REMARK 3 L33: 1.2590 L12: -0.2056 REMARK 3 L13: 0.6323 L23: 0.0234 REMARK 3 S TENSOR REMARK 3 S11: -0.0281 S12: 0.0922 S13: 0.0045 REMARK 3 S21: -0.0867 S22: -0.0009 S23: -0.1139 REMARK 3 S31: 0.0776 S32: 0.1670 S33: 0.0290 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5Z2J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1300006349. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR-H REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40167 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 81.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4UDN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE TRIHYDRATE PH 4.6, REMARK 280 2M AMMONIUM SULPHATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.12000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.56000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.56000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 63.12000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 31.56000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1 REMARK 465 THR A 2 REMARK 465 GLN A 3 REMARK 465 SER A 196 REMARK 465 GLU A 197 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 106 43.05 -80.81 REMARK 500 SER A 110 135.96 -172.38 REMARK 500 SER A 171 -70.24 -88.88 REMARK 500 VAL A 246 -32.62 -137.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 724 DISTANCE = 5.91 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 316 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 317 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 318 DBREF 5Z2J A 1 275 UNP C6XF58 C6XF58_LIBAP 20 294 SEQADV 5Z2J ALA A 38 UNP C6XF58 SER 57 ENGINEERED MUTATION SEQRES 1 A 275 THR THR GLN LYS LYS VAL VAL LEU SER SER PHE SER ILE SEQRES 2 A 275 ILE GLY ASP ILE THR GLN ASN ILE ALA LYS ASP LEU VAL SEQRES 3 A 275 THR VAL THR THR LEU VAL GLU ALA GLY ASN ASP ALA HIS SEQRES 4 A 275 SER TYR GLN VAL THR SER ALA ASP ALA ILE LYS ILE GLN SEQRES 5 A 275 ASN ALA ASP LEU ILE LEU CYS ASN GLY LEU HIS LEU GLU SEQRES 6 A 275 GLU THR TYR MET LYS TYR PHE THR ASN LEU LYS LYS GLY SEQRES 7 A 275 THR LYS ILE ILE THR VAL THR ASP GLY ILE ASN PRO ILE SEQRES 8 A 275 GLY VAL SER GLU ASP THR SER VAL ASP SER GLU PRO ASN SEQRES 9 A 275 PRO HIS ALA TRP MET SER LEU THR ASN ALA MET ILE TYR SEQRES 10 A 275 ILE GLU ASN ILE ARG LYS ALA LEU THR ALA LEU ASP PRO SEQRES 11 A 275 SER ASN ALA LYS LYS TYR GLU LEU ASN ALA ARG GLU TYR SEQRES 12 A 275 SER GLU LYS ILE ARG ASN SER ILE LEU PRO LEU LYS THR SEQRES 13 A 275 ARG ILE GLU LYS VAL ASP PRO GLU LYS ARG TRP PHE VAL SEQRES 14 A 275 THR SER GLU GLY CYS LEU VAL TYR LEU ALA GLU ASP PHE SEQRES 15 A 275 GLY PHE LYS SER LEU TYR LEU TRP PRO ILE ASN SER ASP SEQRES 16 A 275 SER GLU ARG SER PRO SER MET MET ARG HIS ALA ILE ASN SEQRES 17 A 275 GLN MET ARG SER HIS LYS ILE LYS PHE ILE PHE SER GLU SEQRES 18 A 275 SER THR ASN SER ASP GLN PRO ALA LYS GLN VAL ALA TYR SEQRES 19 A 275 GLU THR ASN ALA SER TYR GLY GLY VAL LEU TYR VAL ASP SEQRES 20 A 275 SER LEU SER LYS PRO ASP GLY PRO ALA PRO THR TYR LEU SEQRES 21 A 275 ASP LEU LEU ARG PHE SER LEU THR LYS ILE VAL ASP THR SEQRES 22 A 275 LEU PHE HET ACT A 301 4 HET ACT A 302 4 HET ACT A 303 4 HET ACT A 304 4 HET ACT A 305 4 HET ACT A 306 4 HET ACT A 307 4 HET ACT A 308 4 HET SO4 A 309 5 HET SO4 A 310 5 HET SO4 A 311 5 HET GOL A 312 6 HET GOL A 313 6 HET GOL A 314 6 HET GOL A 315 6 HET GOL A 316 6 HET GOL A 317 6 HET GOL A 318 6 HETNAM ACT ACETATE ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ACT 8(C2 H3 O2 1-) FORMUL 10 SO4 3(O4 S 2-) FORMUL 13 GOL 7(C3 H8 O3) FORMUL 20 HOH *324(H2 O) HELIX 1 AA1 SER A 12 LYS A 23 1 12 HELIX 2 AA2 THR A 44 ALA A 54 1 11 HELIX 3 AA3 TYR A 68 PHE A 72 5 5 HELIX 4 AA4 SER A 110 ASP A 129 1 20 HELIX 5 AA5 ASN A 132 GLU A 159 1 28 HELIX 6 AA6 LYS A 160 VAL A 161 5 2 HELIX 7 AA7 ASP A 162 LYS A 165 5 4 HELIX 8 AA8 LEU A 175 GLY A 183 1 9 HELIX 9 AA9 SER A 199 HIS A 213 1 15 HELIX 10 AB1 ASP A 226 ASN A 237 1 12 HELIX 11 AB2 THR A 258 PHE A 275 1 18 SHEET 1 AA1 4 THR A 27 VAL A 32 0 SHEET 2 AA1 4 VAL A 6 PHE A 11 1 N VAL A 7 O THR A 27 SHEET 3 AA1 4 LEU A 56 CYS A 59 1 O LEU A 58 N LEU A 8 SHEET 4 AA1 4 LYS A 80 THR A 83 1 O ILE A 82 N ILE A 57 SHEET 1 AA2 2 TRP A 167 VAL A 169 0 SHEET 2 AA2 2 LYS A 185 LEU A 187 1 O LYS A 185 N PHE A 168 SHEET 1 AA3 2 PHE A 217 GLU A 221 0 SHEET 2 AA3 2 SER A 239 LEU A 244 1 O GLY A 241 N ILE A 218 SITE 1 AC1 3 SER A 45 HOH A 407 HOH A 428 SITE 1 AC2 3 ASN A 89 HOH A 580 HOH A 672 SITE 1 AC3 4 ARG A 198 ASN A 224 SER A 225 HOH A 496 SITE 1 AC4 3 SER A 150 ARG A 264 HOH A 586 SITE 1 AC5 5 THR A 73 ASN A 74 PRO A 255 PHE A 265 SITE 2 AC5 5 HOH A 543 SITE 1 AC6 3 ARG A 204 ARG A 211 HOH A 438 SITE 1 AC7 6 ASP A 86 ILE A 116 ASN A 120 LYS A 123 SITE 2 AC7 6 ARG A 148 HOH A 432 SITE 1 AC8 2 ARG A 211 ASN A 237 SITE 1 AC9 4 GLU A 33 ASN A 36 HOH A 420 HOH A 548 SITE 1 AD1 5 TYR A 245 SER A 250 LYS A 251 HOH A 538 SITE 2 AD1 5 HOH A 546 SITE 1 AD2 10 VAL A 28 THR A 29 THR A 30 GLU A 33 SITE 2 AD2 10 LYS A 50 HOH A 458 HOH A 470 HOH A 483 SITE 3 AD2 10 HOH A 533 HOH A 563 SITE 1 AD3 6 LYS A 4 LYS A 5 LEU A 25 ASP A 129 SITE 2 AD3 6 SER A 131 ASN A 132 SITE 1 AD4 6 SER A 199 PRO A 200 SER A 201 ARG A 204 SITE 2 AD4 6 ARG A 211 ASN A 237 SITE 1 AD5 3 GLN A 19 ASN A 20 HOH A 471 SITE 1 AD6 8 SER A 12 ASP A 16 GLN A 19 THR A 30 SITE 2 AD6 8 HOH A 458 HOH A 470 HOH A 498 HOH A 551 SITE 1 AD7 6 TYR A 41 THR A 44 ASP A 47 HOH A 469 SITE 2 AD7 6 HOH A 545 HOH A 596 SITE 1 AD8 6 THR A 73 ASN A 74 LEU A 75 HOH A 480 SITE 2 AD8 6 HOH A 518 HOH A 532 SITE 1 AD9 4 HIS A 205 ASN A 208 GLN A 209 HOH A 417 CRYST1 94.070 94.070 94.680 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010630 0.006137 0.000000 0.00000 SCALE2 0.000000 0.012275 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010562 0.00000