HEADER ANTIMICROBIAL PROTEIN 05-JAN-18 5Z32 TITLE LPS BOUND SOLUTION NMR STRUCTURE OF WS2-VR18 COMPND MOL_ID: 1; COMPND 2 MOLECULE: VAL-ALA-ARG-GLY-TRP-GLY-ARG-LYS-CYS-PRO-LEU-PHE-GLY-LYS- COMPND 3 ASN-LYS-SER-ARG; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS DE NOVO DESIGNED PEPTIDE, QUANTUM DOT CONJUGATE, LPS BOUND STRUCTURE, KEYWDS 2 ANTIMICROBIAL ACTIVITY, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.BHUNIA,S.A.MOHID REVDAT 2 14-JUN-23 5Z32 1 JRNL REMARK REVDAT 1 06-FEB-19 5Z32 0 JRNL AUTH S.A.MOHID,A.GHORAI,H.ILYAS,K.H.MROUE,G.NARAYANAN,A.SARKAR, JRNL AUTH 2 S.K.RAY,K.BISWAS,A.K.BERA,M.MALMSTEN,A.MIDYA,A.BHUNIA JRNL TITL APPLICATION OF TUNGSTEN DISULFIDE QUANTUM DOT-CONJUGATED JRNL TITL 2 ANTIMICROBIAL PEPTIDES IN BIO-IMAGING AND ANTIMICROBIAL JRNL TITL 3 THERAPY. JRNL REF COLLOIDS SURF B V. 176 360 2019 JRNL REF 2 BIOINTERFACES JRNL REFN ESSN 1873-4367 JRNL PMID 30658284 JRNL DOI 10.1016/J.COLSURFB.2019.01.020 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5Z32 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1300006393. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4.5 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.5 MM VAL-ALA-ARG-GLY-TRP-GLY REMARK 210 -ARG-LYS-CYS-PRO-LEU-PHE-GLY-LYS-ASN-LYS-SER-ARG, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D TRNOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 3.1, SPARKY 3.114 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TRP A 5 -61.05 -120.04 REMARK 500 1 CYS A 9 76.59 -112.81 REMARK 500 2 LYS A 8 -76.63 -49.92 REMARK 500 2 LYS A 14 -75.28 -86.44 REMARK 500 2 ASN A 15 -86.97 -123.40 REMARK 500 3 LYS A 8 -77.46 -50.51 REMARK 500 3 LYS A 14 -74.91 -88.66 REMARK 500 3 ASN A 15 -86.57 -123.90 REMARK 500 4 LYS A 8 -77.10 -51.45 REMARK 500 5 LYS A 8 -77.40 -50.93 REMARK 500 6 LYS A 8 -77.28 -50.61 REMARK 500 7 ARG A 7 -53.28 -120.90 REMARK 500 7 LYS A 8 -77.88 -49.71 REMARK 500 8 LYS A 8 -77.46 -50.98 REMARK 500 9 LYS A 8 -77.21 -51.42 REMARK 500 10 ARG A 7 -54.83 -121.03 REMARK 500 10 LYS A 8 -78.47 -50.86 REMARK 500 10 LEU A 11 -96.57 -77.16 REMARK 500 10 LYS A 14 -66.98 -106.54 REMARK 500 10 ASN A 15 -79.87 -122.54 REMARK 500 10 SER A 17 -76.08 -112.00 REMARK 500 11 LYS A 8 -77.80 -51.47 REMARK 500 11 LEU A 11 -78.05 -38.41 REMARK 500 11 LYS A 14 -69.80 -98.49 REMARK 500 11 ASN A 15 -76.87 -121.42 REMARK 500 11 SER A 17 -59.06 -120.41 REMARK 500 12 LYS A 8 -77.67 -50.80 REMARK 500 13 TRP A 5 -76.34 -49.27 REMARK 500 13 PRO A 10 -82.57 -69.78 REMARK 500 13 LYS A 16 -78.35 -46.13 REMARK 500 14 CYS A 9 75.61 -113.08 REMARK 500 15 CYS A 9 73.22 -117.34 REMARK 500 16 CYS A 9 74.80 -113.43 REMARK 500 17 CYS A 9 74.41 -113.54 REMARK 500 18 CYS A 9 72.69 -116.32 REMARK 500 19 CYS A 9 75.11 -113.32 REMARK 500 20 LYS A 14 -39.19 -39.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36150 RELATED DB: BMRB REMARK 900 LPS BOUND SOLUTION NMR STRUCTURE OF WS2-VR18 DBREF 5Z32 A 1 18 PDB 5Z32 5Z32 1 18 SEQRES 1 A 18 VAL ALA ARG GLY TRP GLY ARG LYS CYS PRO LEU PHE GLY SEQRES 2 A 18 LYS ASN LYS SER ARG CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1