HEADER TRANSFERASE 05-JAN-18 5Z33 TITLE CRYSTAL STRUCTURE OF MITOGEN-ACTIVATED PROTEIN KINASE MPS1 IN TITLE 2 MAGNAPORTHE ORYZAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.11.24; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MAGNAPORTHE ORYZAE (STRAIN P131); SOURCE 3 ORGANISM_COMMON: RICE BLAST FUNGUS; SOURCE 4 ORGANISM_TAXID: 1143193; SOURCE 5 STRAIN: P131; SOURCE 6 GENE: MPS1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS MPS1, MAPK, PHOSPHORYLATION, MAGNAPORTHE ORYZAE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.ZHOU,J.F.LIU,G.Z.ZHANG REVDAT 2 27-MAR-24 5Z33 1 REMARK REVDAT 1 20-MAR-19 5Z33 0 JRNL AUTH F.ZHOU,J.B.PENG,Y.X.ZHAO,X.CHEN,Y.Y.ZHANG,Y.L.PENG,J.F.LIU, JRNL AUTH 2 G.Z.ZHANG JRNL TITL CRYSTAL STRUCTURE OF MITOGEN-ACTIVATED PROTEIN KINASE MPS1 JRNL TITL 2 IN MAGNAPORTHE ORYZAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.310 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 35781 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.560 REMARK 3 FREE R VALUE TEST SET COUNT : 1989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 59.8220 - 4.7956 0.99 2569 157 0.1850 0.2328 REMARK 3 2 4.7956 - 3.8066 1.00 2462 144 0.1577 0.1754 REMARK 3 3 3.8066 - 3.3254 1.00 2454 142 0.1766 0.2057 REMARK 3 4 3.3254 - 3.0214 1.00 2422 139 0.1941 0.2566 REMARK 3 5 3.0214 - 2.8048 1.00 2420 143 0.2034 0.2308 REMARK 3 6 2.8048 - 2.6395 1.00 2395 137 0.1987 0.2143 REMARK 3 7 2.6395 - 2.5073 1.00 2410 145 0.1980 0.2534 REMARK 3 8 2.5073 - 2.3981 1.00 2373 142 0.1978 0.2350 REMARK 3 9 2.3981 - 2.3058 1.00 2395 139 0.1998 0.2214 REMARK 3 10 2.3058 - 2.2262 1.00 2380 140 0.1994 0.2513 REMARK 3 11 2.2262 - 2.1566 1.00 2391 138 0.2030 0.2413 REMARK 3 12 2.1566 - 2.0950 1.00 2391 140 0.2114 0.2771 REMARK 3 13 2.0950 - 2.0398 1.00 2371 143 0.2222 0.2180 REMARK 3 14 2.0398 - 1.9901 1.00 2359 140 0.2408 0.2787 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3081 REMARK 3 ANGLE : 1.048 4173 REMARK 3 CHIRALITY : 0.054 454 REMARK 3 PLANARITY : 0.007 548 REMARK 3 DIHEDRAL : 6.612 1852 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.046 -36.192 22.033 REMARK 3 T TENSOR REMARK 3 T11: 0.2792 T22: 0.5368 REMARK 3 T33: 0.4881 T12: 0.0974 REMARK 3 T13: -0.0006 T23: 0.0435 REMARK 3 L TENSOR REMARK 3 L11: 4.1493 L22: 2.2830 REMARK 3 L33: 6.2345 L12: 0.8752 REMARK 3 L13: 1.0408 L23: -0.9249 REMARK 3 S TENSOR REMARK 3 S11: -0.0739 S12: 0.7237 S13: -0.2471 REMARK 3 S21: -0.4383 S22: -0.1252 S23: -0.4541 REMARK 3 S31: 0.1105 S32: 0.8161 S33: 0.1631 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.972 -34.300 34.582 REMARK 3 T TENSOR REMARK 3 T11: 0.2120 T22: 0.3008 REMARK 3 T33: 0.2515 T12: 0.0519 REMARK 3 T13: 0.0247 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 4.0615 L22: 1.4837 REMARK 3 L33: 3.4919 L12: -0.0934 REMARK 3 L13: 2.5260 L23: 0.5245 REMARK 3 S TENSOR REMARK 3 S11: -0.0548 S12: 0.1992 S13: -0.0890 REMARK 3 S21: -0.1773 S22: 0.0542 S23: 0.0983 REMARK 3 S31: -0.0551 S32: 0.2435 S33: -0.0117 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 163 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.284 -46.839 40.978 REMARK 3 T TENSOR REMARK 3 T11: 0.3751 T22: 0.7415 REMARK 3 T33: 0.6330 T12: -0.0995 REMARK 3 T13: -0.0353 T23: 0.2054 REMARK 3 L TENSOR REMARK 3 L11: 3.5229 L22: 4.0895 REMARK 3 L33: 5.4229 L12: 2.3044 REMARK 3 L13: -3.9311 L23: -3.6445 REMARK 3 S TENSOR REMARK 3 S11: 0.0639 S12: -0.4030 S13: -0.6585 REMARK 3 S21: 0.3110 S22: 0.0224 S23: 0.7561 REMARK 3 S31: 0.7011 S32: -0.6517 S33: -0.0181 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 187 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.938 -52.439 44.596 REMARK 3 T TENSOR REMARK 3 T11: 0.3658 T22: 0.4352 REMARK 3 T33: 0.5466 T12: -0.0068 REMARK 3 T13: -0.0513 T23: 0.0553 REMARK 3 L TENSOR REMARK 3 L11: 5.6471 L22: 4.8339 REMARK 3 L33: 7.8362 L12: -1.2925 REMARK 3 L13: 1.5553 L23: -2.4037 REMARK 3 S TENSOR REMARK 3 S11: 0.0324 S12: 0.1826 S13: -0.7024 REMARK 3 S21: -0.2708 S22: 0.5516 S23: 1.0729 REMARK 3 S31: 0.8160 S32: -1.0461 S33: -0.6043 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 208 THROUGH 360 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.734 -44.170 47.370 REMARK 3 T TENSOR REMARK 3 T11: 0.2992 T22: 0.3623 REMARK 3 T33: 0.3304 T12: 0.0357 REMARK 3 T13: 0.0219 T23: 0.0232 REMARK 3 L TENSOR REMARK 3 L11: 1.4563 L22: 1.1203 REMARK 3 L33: 1.7366 L12: -0.6019 REMARK 3 L13: 0.9249 L23: -0.4876 REMARK 3 S TENSOR REMARK 3 S11: 0.0328 S12: -0.2812 S13: -0.1929 REMARK 3 S21: 0.1321 S22: 0.1054 S23: 0.2013 REMARK 3 S31: 0.2552 S32: -0.1948 S33: -0.1255 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 394 THROUGH 412 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.133 -1.528 45.040 REMARK 3 T TENSOR REMARK 3 T11: 0.6068 T22: 0.4498 REMARK 3 T33: 0.7061 T12: -0.0822 REMARK 3 T13: -0.1879 T23: -0.0345 REMARK 3 L TENSOR REMARK 3 L11: 7.3155 L22: 2.4910 REMARK 3 L33: 1.9581 L12: -4.2635 REMARK 3 L13: -2.0720 L23: 1.0832 REMARK 3 S TENSOR REMARK 3 S11: 0.2399 S12: 0.2661 S13: -1.3639 REMARK 3 S21: -0.3103 S22: -0.4551 S23: 0.5985 REMARK 3 S31: 0.3789 S32: -0.7164 S33: 0.3354 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5Z33 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1300006400. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 379824 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 79.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CACODYLATE TRIHYDRATE, REMARK 280 TACSIMATE, SPERMINE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.70733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.85367 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 52.85367 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 105.70733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 SER A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 LEU A 4 REMARK 465 ALA A 361 REMARK 465 PRO A 362 REMARK 465 GLY A 363 REMARK 465 ALA A 364 REMARK 465 GLY A 365 REMARK 465 GLY A 366 REMARK 465 HIS A 367 REMARK 465 GLY A 368 REMARK 465 ALA A 369 REMARK 465 PRO A 370 REMARK 465 HIS A 371 REMARK 465 ALA A 372 REMARK 465 PRO A 373 REMARK 465 GLN A 374 REMARK 465 VAL A 375 REMARK 465 PRO A 376 REMARK 465 ILE A 377 REMARK 465 PRO A 378 REMARK 465 ALA A 379 REMARK 465 GLY A 380 REMARK 465 ALA A 381 REMARK 465 GLY A 382 REMARK 465 GLN A 383 REMARK 465 GLY A 384 REMARK 465 GLN A 385 REMARK 465 TRP A 386 REMARK 465 LYS A 387 REMARK 465 ALA A 388 REMARK 465 GLU A 389 REMARK 465 ASP A 390 REMARK 465 PRO A 391 REMARK 465 ARG A 392 REMARK 465 PRO A 393 REMARK 465 GLN A 413 REMARK 465 ARG A 414 REMARK 465 ARG A 415 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 21 CG CD OE1 OE2 REMARK 470 ARG A 22 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 625 O HOH A 645 1.87 REMARK 500 O HOH A 647 O HOH A 650 1.89 REMARK 500 SD MET A 271 O HOH A 644 2.16 REMARK 500 O HOH A 564 O HOH A 648 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 258 OE2 GLU A 406 1545 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 178 C - N - CA ANGL. DEV. = 23.9 DEGREES REMARK 500 PRO A 178 C - N - CD ANGL. DEV. = -28.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 29 -155.67 -108.89 REMARK 500 ARG A 148 -16.94 74.48 REMARK 500 ASP A 167 90.09 61.65 REMARK 500 ASP A 177 -177.63 -64.71 REMARK 500 PRO A 178 -115.88 45.17 REMARK 500 LYS A 230 65.12 -114.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE REFERENCE G4N374 (G4N374_MAGO7) WAS DERIVED FROM A REMARK 999 DIFFERENT STRAIN MAGNAPORTHE ORYZAE (STRAIN 70-15 / ATCC MYA-4617 / REMARK 999 FGSC 8958) (TAXID 242507). DBREF 5Z33 A 1 415 UNP G4N374 G4N374_MAGO7 1 415 SEQADV 5Z33 MET A -9 UNP G4N374 EXPRESSION TAG SEQADV 5Z33 SER A -8 UNP G4N374 EXPRESSION TAG SEQADV 5Z33 HIS A -7 UNP G4N374 EXPRESSION TAG SEQADV 5Z33 HIS A -6 UNP G4N374 EXPRESSION TAG SEQADV 5Z33 HIS A -5 UNP G4N374 EXPRESSION TAG SEQADV 5Z33 HIS A -4 UNP G4N374 EXPRESSION TAG SEQADV 5Z33 HIS A -3 UNP G4N374 EXPRESSION TAG SEQADV 5Z33 HIS A -2 UNP G4N374 EXPRESSION TAG SEQADV 5Z33 SER A -1 UNP G4N374 EXPRESSION TAG SEQADV 5Z33 MET A 0 UNP G4N374 EXPRESSION TAG SEQRES 1 A 425 MET SER HIS HIS HIS HIS HIS HIS SER MET MET SER ASP SEQRES 2 A 425 LEU GLN GLY ARG LYS ILE PHE LYS VAL PHE ASN GLN ASP SEQRES 3 A 425 PHE ILE VAL ASP GLU ARG TYR THR VAL THR LYS GLU LEU SEQRES 4 A 425 GLY GLN GLY ALA TYR GLY ILE VAL CYS ALA ALA VAL ASN SEQRES 5 A 425 ASN GLN THR SER GLU GLY VAL ALA ILE LYS LYS VAL THR SEQRES 6 A 425 ASN VAL PHE SER LYS LYS ILE LEU ALA LYS ARG ALA LEU SEQRES 7 A 425 ARG GLU ILE LYS LEU LEU GLN HIS PHE ARG GLY HIS ARG SEQRES 8 A 425 ASN ILE THR CYS LEU TYR ASP MET ASP ILE PRO ARG PRO SEQRES 9 A 425 ASP ASN PHE ASN GLU THR TYR LEU TYR GLU GLU LEU MET SEQRES 10 A 425 GLU CYS ASP LEU ALA ALA ILE ILE ARG SER GLY GLN PRO SEQRES 11 A 425 LEU THR ASP ALA HIS PHE GLN SER PHE ILE TYR GLN ILE SEQRES 12 A 425 LEU CYS GLY LEU LYS TYR ILE HIS SER ALA ASN VAL LEU SEQRES 13 A 425 HIS ARG ASP LEU LYS PRO GLY ASN LEU LEU VAL ASN ALA SEQRES 14 A 425 ASP CYS GLU LEU LYS ILE CYS ASP PHE GLY LEU ALA ARG SEQRES 15 A 425 GLY PHE SER VAL ASP PRO GLU GLU ASN ALA GLY TYR MET SEQRES 16 A 425 THR GLU TYR VAL ALA THR ARG TRP TYR ARG ALA PRO GLU SEQRES 17 A 425 ILE MET LEU SER PHE GLN SER TYR THR LYS ALA ILE ASP SEQRES 18 A 425 VAL TRP SER VAL GLY CYS ILE LEU ALA GLU LEU LEU GLY SEQRES 19 A 425 GLY ARG PRO PHE PHE LYS GLY ARG ASP TYR VAL ASP GLN SEQRES 20 A 425 LEU ASN GLN ILE LEU HIS ILE LEU GLY THR PRO ASN GLU SEQRES 21 A 425 GLU THR LEU SER ARG ILE GLY SER PRO ARG ALA GLN GLU SEQRES 22 A 425 TYR VAL ARG ASN LEU PRO PHE MET ALA LYS LYS PRO PHE SEQRES 23 A 425 PRO THR LEU PHE PRO ASN ALA ASN PRO ASP ALA LEU ASP SEQRES 24 A 425 LEU LEU ASP ARG MET LEU ALA PHE ASP PRO SER SER ARG SEQRES 25 A 425 ILE SER VAL GLU GLN ALA LEU GLU HIS PRO TYR LEU HIS SEQRES 26 A 425 ILE TRP HIS ASP ALA SER ASP GLU PRO ASP CYS PRO THR SEQRES 27 A 425 THR PHE ASN PHE ASP PHE GLU VAL VAL GLU ASP VAL GLY SEQRES 28 A 425 GLU MET ARG LYS MET ILE LEU ASP GLU VAL TYR ARG PHE SEQRES 29 A 425 ARG GLN LEU VAL ARG THR ALA PRO GLY ALA GLY GLY HIS SEQRES 30 A 425 GLY ALA PRO HIS ALA PRO GLN VAL PRO ILE PRO ALA GLY SEQRES 31 A 425 ALA GLY GLN GLY GLN TRP LYS ALA GLU ASP PRO ARG PRO SEQRES 32 A 425 GLN GLU TYR VAL GLY GLN MET ASN ASP LEU GLU ALA GLU SEQRES 33 A 425 LEU ALA GLY GLY LEU ASP GLN ARG ARG FORMUL 2 HOH *151(H2 O) HELIX 1 AA1 LYS A 60 PHE A 77 1 18 HELIX 2 AA2 LEU A 111 GLY A 118 1 8 HELIX 3 AA3 THR A 122 ALA A 143 1 22 HELIX 4 AA4 LYS A 151 GLY A 153 5 3 HELIX 5 AA5 PRO A 178 TYR A 184 1 7 HELIX 6 AA6 THR A 191 ARG A 195 5 5 HELIX 7 AA7 ALA A 196 LEU A 201 1 6 HELIX 8 AA8 LYS A 208 GLY A 225 1 18 HELIX 9 AA9 ASP A 233 GLY A 246 1 14 HELIX 10 AB1 ASN A 249 ARG A 255 1 7 HELIX 11 AB2 SER A 258 LEU A 268 1 11 HELIX 12 AB3 PRO A 275 PHE A 280 1 6 HELIX 13 AB4 ASN A 284 LEU A 295 1 12 HELIX 14 AB5 ASP A 298 ARG A 302 5 5 HELIX 15 AB6 SER A 304 GLU A 310 1 7 HELIX 16 AB7 HIS A 311 HIS A 315 5 5 HELIX 17 AB8 ASP A 319 GLU A 323 5 5 HELIX 18 AB9 PHE A 332 VAL A 337 5 6 HELIX 19 AC1 ASP A 339 ARG A 359 1 21 HELIX 20 AC2 GLU A 395 GLY A 409 1 15 SHEET 1 AA1 2 ARG A 7 VAL A 12 0 SHEET 2 AA1 2 GLN A 15 ASP A 20 -1 O PHE A 17 N PHE A 10 SHEET 1 AA2 5 TYR A 23 GLN A 31 0 SHEET 2 AA2 5 GLY A 35 ASN A 42 -1 O ALA A 39 N LYS A 27 SHEET 3 AA2 5 GLY A 48 VAL A 54 -1 O LYS A 53 N ILE A 36 SHEET 4 AA2 5 THR A 100 GLU A 104 -1 O THR A 100 N VAL A 54 SHEET 5 AA2 5 LEU A 86 ASP A 90 -1 N TYR A 87 O TYR A 103 SHEET 1 AA3 3 CYS A 109 ASP A 110 0 SHEET 2 AA3 3 LEU A 155 VAL A 157 -1 O VAL A 157 N CYS A 109 SHEET 3 AA3 3 LEU A 163 ILE A 165 -1 O LYS A 164 N LEU A 156 SHEET 1 AA4 2 VAL A 145 LEU A 146 0 SHEET 2 AA4 2 ARG A 172 GLY A 173 -1 O ARG A 172 N LEU A 146 CISPEP 1 ASP A 177 PRO A 178 0 27.71 CRYST1 74.549 74.549 158.561 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013414 0.007745 0.000000 0.00000 SCALE2 0.000000 0.015489 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006307 0.00000