HEADER TRANSFERASE 10-JAN-18 5Z46 TITLE CRYSTAL STRUCTURE OF PRENYLTRANSFERASE AMBP1 PH8 COMPLEXED WITH GSPP TITLE 2 AND CIS-INDOLYL VINYL ISONITRILE COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMBP1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AROMATIC PRENYLTRANSFERASE,ORF2-1-RELATED AROMATIC COMPND 5 PRENYLTRANSFERASE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FISCHERELLA AMBIGUA UTEX 1903; SOURCE 3 ORGANISM_TAXID: 230521; SOURCE 4 GENE: AMBP1, FAMD2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PRENYLTRANSFERASE, AMBP1, INDOLE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.AWAKAWA,Y.NAKASHIMA,T.MORI,I.ABE REVDAT 3 22-NOV-23 5Z46 1 LINK REVDAT 2 13-JUN-18 5Z46 1 JRNL REVDAT 1 06-JUN-18 5Z46 0 JRNL AUTH T.AWAKAWA,T.MORI,Y.NAKASHIMA,R.ZHAI,C.P.WONG,M.L.HILLWIG, JRNL AUTH 2 X.LIU,I.ABE JRNL TITL MOLECULAR INSIGHT INTO THE MG2+-DEPENDENT ALLOSTERIC CONTROL JRNL TITL 2 OF INDOLE PRENYLATION BY AROMATIC PRENYLTRANSFERASE AMBP1 JRNL REF ANGEW. CHEM. INT. ED. ENGL. V. 57 6810 2018 JRNL REFN ESSN 1521-3773 JRNL PMID 29677386 JRNL DOI 10.1002/ANIE.201800855 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 45733 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.410 REMARK 3 FREE R VALUE TEST SET COUNT : 2016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.7515 - 4.8151 1.00 3240 157 0.1726 0.2276 REMARK 3 2 4.8151 - 3.8231 1.00 3155 144 0.1626 0.1790 REMARK 3 3 3.8231 - 3.3402 1.00 3146 143 0.1757 0.2105 REMARK 3 4 3.3402 - 3.0349 1.00 3132 148 0.1959 0.2583 REMARK 3 5 3.0349 - 2.8175 1.00 3122 147 0.2070 0.2400 REMARK 3 6 2.8175 - 2.6514 1.00 3121 140 0.2092 0.2966 REMARK 3 7 2.6514 - 2.5186 1.00 3115 144 0.2177 0.2964 REMARK 3 8 2.5186 - 2.4090 1.00 3128 142 0.2086 0.2649 REMARK 3 9 2.4090 - 2.3163 1.00 3102 143 0.2105 0.2579 REMARK 3 10 2.3163 - 2.2364 1.00 3086 143 0.2097 0.2393 REMARK 3 11 2.2364 - 2.1665 1.00 3096 143 0.2132 0.2825 REMARK 3 12 2.1665 - 2.1045 1.00 3121 142 0.2179 0.2561 REMARK 3 13 2.1045 - 2.0491 1.00 3057 137 0.2269 0.2987 REMARK 3 14 2.0491 - 1.9992 0.98 3096 143 0.2515 0.3177 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4857 REMARK 3 ANGLE : 0.911 6602 REMARK 3 CHIRALITY : 0.055 702 REMARK 3 PLANARITY : 0.007 866 REMARK 3 DIHEDRAL : 15.839 2858 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.6523 16.2236 10.7398 REMARK 3 T TENSOR REMARK 3 T11: 0.3203 T22: 0.2482 REMARK 3 T33: 0.2731 T12: -0.1021 REMARK 3 T13: 0.0028 T23: -0.0510 REMARK 3 L TENSOR REMARK 3 L11: 5.1473 L22: 7.7181 REMARK 3 L33: 8.8326 L12: -2.1456 REMARK 3 L13: -0.4215 L23: 0.6893 REMARK 3 S TENSOR REMARK 3 S11: 0.2580 S12: 0.0674 S13: -0.3413 REMARK 3 S21: -0.0156 S22: -0.3552 S23: 0.1005 REMARK 3 S31: 0.5557 S32: -0.2274 S33: 0.0769 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 64 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.4980 30.8732 21.5598 REMARK 3 T TENSOR REMARK 3 T11: 0.3620 T22: 0.4520 REMARK 3 T33: 0.3019 T12: -0.0884 REMARK 3 T13: 0.0781 T23: -0.0626 REMARK 3 L TENSOR REMARK 3 L11: 1.4615 L22: 7.4904 REMARK 3 L33: 1.8614 L12: -0.1167 REMARK 3 L13: -0.4748 L23: 0.1772 REMARK 3 S TENSOR REMARK 3 S11: 0.0869 S12: -0.3141 S13: -0.0176 REMARK 3 S21: 0.7011 S22: -0.2263 S23: 0.4288 REMARK 3 S31: 0.0936 S32: -0.4106 S33: 0.1312 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 290 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.6232 35.5229 4.6635 REMARK 3 T TENSOR REMARK 3 T11: 0.2384 T22: 0.2911 REMARK 3 T33: 0.2239 T12: 0.0081 REMARK 3 T13: 0.0209 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 1.6233 L22: 4.9293 REMARK 3 L33: 2.1222 L12: 1.0922 REMARK 3 L13: 0.0760 L23: 0.4115 REMARK 3 S TENSOR REMARK 3 S11: -0.0425 S12: 0.1938 S13: -0.0985 REMARK 3 S21: -0.4180 S22: -0.0125 S23: -0.0111 REMARK 3 S31: 0.2116 S32: -0.1038 S33: 0.0617 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.9886 -8.1007 -10.0810 REMARK 3 T TENSOR REMARK 3 T11: 0.3322 T22: 0.9807 REMARK 3 T33: 0.7663 T12: 0.1010 REMARK 3 T13: -0.0397 T23: -0.2247 REMARK 3 L TENSOR REMARK 3 L11: 8.2824 L22: 2.0605 REMARK 3 L33: 9.2224 L12: -3.0771 REMARK 3 L13: -2.7331 L23: -2.4202 REMARK 3 S TENSOR REMARK 3 S11: 0.0816 S12: 0.2105 S13: -0.6421 REMARK 3 S21: 0.2772 S22: 0.0432 S23: -1.6997 REMARK 3 S31: 0.1267 S32: 1.8841 S33: 0.0295 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 24 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.6637 -2.1423 -19.6308 REMARK 3 T TENSOR REMARK 3 T11: 0.3169 T22: 0.9481 REMARK 3 T33: 0.6544 T12: -0.0980 REMARK 3 T13: 0.0966 T23: -0.1933 REMARK 3 L TENSOR REMARK 3 L11: 8.7208 L22: 7.0422 REMARK 3 L33: 7.6398 L12: -7.1629 REMARK 3 L13: -1.6335 L23: 1.6494 REMARK 3 S TENSOR REMARK 3 S11: 0.1197 S12: 0.7910 S13: 0.1237 REMARK 3 S21: -0.6310 S22: 0.0493 S23: -1.4109 REMARK 3 S31: -0.4034 S32: 1.8000 S33: -0.2124 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.3472 -6.8033 -9.0819 REMARK 3 T TENSOR REMARK 3 T11: 0.2859 T22: 0.4547 REMARK 3 T33: 0.5193 T12: 0.0691 REMARK 3 T13: 0.0321 T23: -0.1074 REMARK 3 L TENSOR REMARK 3 L11: 9.0095 L22: 2.2076 REMARK 3 L33: 9.7709 L12: 5.8923 REMARK 3 L13: -3.4949 L23: -7.2556 REMARK 3 S TENSOR REMARK 3 S11: -0.1187 S12: -0.3068 S13: -1.2207 REMARK 3 S21: -0.3614 S22: -0.0251 S23: -0.2102 REMARK 3 S31: 0.5034 S32: 0.5932 S33: 0.1236 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 64 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8982 1.2562 -23.2720 REMARK 3 T TENSOR REMARK 3 T11: 0.3721 T22: 0.4498 REMARK 3 T33: 0.3263 T12: -0.1416 REMARK 3 T13: 0.0895 T23: -0.0948 REMARK 3 L TENSOR REMARK 3 L11: 9.6454 L22: 6.3558 REMARK 3 L33: 4.5848 L12: -3.5583 REMARK 3 L13: -0.8235 L23: -1.1488 REMARK 3 S TENSOR REMARK 3 S11: 0.0311 S12: 0.7862 S13: -0.2976 REMARK 3 S21: -0.7745 S22: 0.1862 S23: -0.2091 REMARK 3 S31: -0.1211 S32: 0.3802 S33: -0.2320 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9149 -0.2647 -16.1807 REMARK 3 T TENSOR REMARK 3 T11: 0.2206 T22: 0.1945 REMARK 3 T33: 0.1906 T12: -0.0024 REMARK 3 T13: -0.0088 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 8.1145 L22: 4.4128 REMARK 3 L33: 7.0982 L12: 2.4753 REMARK 3 L13: -3.2235 L23: -0.6338 REMARK 3 S TENSOR REMARK 3 S11: 0.0907 S12: 0.2547 S13: 0.1817 REMARK 3 S21: -0.3436 S22: 0.1577 S23: 0.0365 REMARK 3 S31: -0.4259 S32: 0.1700 S33: -0.2465 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 173 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3362 -5.2414 -2.3919 REMARK 3 T TENSOR REMARK 3 T11: 0.2720 T22: 0.2928 REMARK 3 T33: 0.2922 T12: 0.0165 REMARK 3 T13: -0.0353 T23: 0.0324 REMARK 3 L TENSOR REMARK 3 L11: 4.1286 L22: 6.3254 REMARK 3 L33: 3.3298 L12: -1.6031 REMARK 3 L13: -1.3122 L23: 2.1526 REMARK 3 S TENSOR REMARK 3 S11: -0.0209 S12: -0.5665 S13: -0.2477 REMARK 3 S21: 0.5394 S22: 0.2863 S23: -0.2927 REMARK 3 S31: 0.3852 S32: 0.3526 S33: -0.3181 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 221 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.4290 -4.5937 -0.7449 REMARK 3 T TENSOR REMARK 3 T11: 0.3085 T22: 0.5661 REMARK 3 T33: 0.4082 T12: 0.0574 REMARK 3 T13: -0.0387 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 3.7746 L22: 3.5012 REMARK 3 L33: 5.1217 L12: 0.6225 REMARK 3 L13: 1.3268 L23: 1.4664 REMARK 3 S TENSOR REMARK 3 S11: 0.0145 S12: -0.5211 S13: -0.3604 REMARK 3 S21: 0.3659 S22: 0.0348 S23: -0.5237 REMARK 3 S31: 0.1373 S32: 0.8986 S33: -0.1154 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5Z46 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1300006445. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45762 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.999 REMARK 200 RESOLUTION RANGE LOW (A) : 49.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.58300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5Z43 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM MES, 0.2M MGCL2, 22% PEG8000, REMARK 280 LIGANDS WERE SOAKED AT PH8.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.66200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 12.33100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 36.99300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 291 REMARK 465 MET A 292 REMARK 465 LYS A 293 REMARK 465 VAL A 294 REMARK 465 HIS A 295 REMARK 465 SER A 296 REMARK 465 GLN A 297 REMARK 465 PRO A 298 REMARK 465 LEU A 299 REMARK 465 PRO A 300 REMARK 465 LYS A 301 REMARK 465 ALA A 302 REMARK 465 ALA A 303 REMARK 465 ASP A 304 REMARK 465 PHE A 305 REMARK 465 ALA A 306 REMARK 465 LEU A 307 REMARK 465 ALA A 308 REMARK 465 GLN A 309 REMARK 465 MET B 1 REMARK 465 LYS B 293 REMARK 465 VAL B 294 REMARK 465 HIS B 295 REMARK 465 SER B 296 REMARK 465 GLN B 297 REMARK 465 PRO B 298 REMARK 465 LEU B 299 REMARK 465 PRO B 300 REMARK 465 LYS B 301 REMARK 465 ALA B 302 REMARK 465 ALA B 303 REMARK 465 ASP B 304 REMARK 465 PHE B 305 REMARK 465 ALA B 306 REMARK 465 LEU B 307 REMARK 465 ALA B 308 REMARK 465 GLN B 309 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 152 58.80 -105.42 REMARK 500 ASN A 207 -58.84 79.84 REMARK 500 ASN B 49 54.90 -116.80 REMARK 500 LEU B 152 56.51 -108.89 REMARK 500 ASN B 206 -171.48 -64.78 REMARK 500 ARG B 286 65.47 -111.49 REMARK 500 THR B 287 -53.35 -149.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 41 OD1 REMARK 620 2 GLU A 63 OE2 96.3 REMARK 620 3 ASP A 65 OD1 166.3 85.7 REMARK 620 4 HOH A 514 O 99.0 88.2 94.6 REMARK 620 5 HOH A 524 O 90.3 170.6 86.3 97.3 REMARK 620 6 HOH A 528 O 86.3 80.6 80.6 168.1 93.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 173 OG1 REMARK 620 2 ASN A 207 OD1 63.9 REMARK 620 3 GLY A 208 O 88.2 65.5 REMARK 620 4 GLU A 209 OE2 135.0 140.0 78.9 REMARK 620 5 HOH A 510 O 88.0 142.6 141.9 77.4 REMARK 620 6 HOH A 538 O 142.5 126.4 129.3 64.5 63.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 41 OD1 REMARK 620 2 GLU B 63 OE1 94.0 REMARK 620 3 ASP B 65 OD2 178.6 87.3 REMARK 620 4 HOH B 504 O 87.5 171.9 91.1 REMARK 620 5 HOH B 518 O 94.1 77.0 85.7 95.0 REMARK 620 6 HOH B 535 O 86.7 88.5 93.9 99.5 165.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 208 O REMARK 620 2 GLU B 209 OE2 70.6 REMARK 620 3 HOH B 510 O 138.4 149.5 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GST B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8XL B 404 DBREF 5Z46 A 1 309 UNP V5TDZ4 V5TDZ4_9CYAN 1 309 DBREF 5Z46 B 1 309 UNP V5TDZ4 V5TDZ4_9CYAN 1 309 SEQRES 1 A 309 MET ASN ASP VAL ASN ARG ILE ARG THR ASP ILE ILE ASN SEQRES 2 A 309 VAL ALA LYS THR PHE GLY ALA GLU TYR SER GLU LYS VAL SEQRES 3 A 309 LEU ASP GLU VAL PHE GLN VAL PHE GLY GLU GLN PHE ALA SEQRES 4 A 309 ASP ASN SER PHE MET ILE ARG THR SER ASN LYS GLN PRO SEQRES 5 A 309 ASP LYS LEU GLY CYS TYR PHE ARG TYR HIS GLU GLU ASP SEQRES 6 A 309 GLU SER GLN LEU GLY LEU ALA TRP ASP ILE ALA ARG LYS SEQRES 7 A 309 SER GLY LEU LEU SER ASP GLN GLY ARG PRO VAL ASP GLN SEQRES 8 A 309 LEU ILE PRO GLU ILE CYS GLU THR PHE PRO ILE MET ALA SEQRES 9 A 309 ASP GLY VAL ASP PHE ASP VAL LYS HIS GLY LEU ALA LYS SEQRES 10 A 309 ILE TRP GLN SER ILE LYS GLY VAL VAL PRO VAL GLN ASP SEQRES 11 A 309 ALA PHE LYS LEU SER LEU PRO ALA SER VAL THR THR HIS SEQRES 12 A 309 SER ASP PHE LEU LYS ASN HIS HIS LEU ASP ALA LEU TYR SEQRES 13 A 309 ALA PHE GLY ILE ASP TYR HIS HIS SER SER VAL ASN LEU SEQRES 14 A 309 TYR PHE ASP THR TYR HIS PRO LYS HIS HIS THR SER GLU SEQRES 15 A 309 TYR TYR LYS ASN LEU LEU GLN ASP LEU GLN PHE GLN PRO SEQRES 16 A 309 PRO SER ASP GLU LEU LEU GLU LEU LEU THR ASN ASN GLY SEQRES 17 A 309 GLU ILE ALA LEU THR PHE ASN PHE ALA SER PRO ARG ILE SEQRES 18 A 309 GLU ARG LEU CYS PHE TYR LEU PRO PHE LEU ASN ARG GLU SEQRES 19 A 309 ALA VAL PRO GLN ASN LEU LEU ASN PRO LEU LEU LYS LYS SEQRES 20 A 309 TYR ILE ASN GLU ALA PRO ALA LEU VAL ASP ASN PRO GLY SEQRES 21 A 309 PHE ILE LEU GLY TRP SER PHE GLY PRO GLN GLY GLY LYS SEQRES 22 A 309 GLY THR TYR THR LYS VAL ASP VAL ASP TYR HIS GLY ARG SEQRES 23 A 309 THR VAL PRO LEU PHE MET LYS VAL HIS SER GLN PRO LEU SEQRES 24 A 309 PRO LYS ALA ALA ASP PHE ALA LEU ALA GLN SEQRES 1 B 309 MET ASN ASP VAL ASN ARG ILE ARG THR ASP ILE ILE ASN SEQRES 2 B 309 VAL ALA LYS THR PHE GLY ALA GLU TYR SER GLU LYS VAL SEQRES 3 B 309 LEU ASP GLU VAL PHE GLN VAL PHE GLY GLU GLN PHE ALA SEQRES 4 B 309 ASP ASN SER PHE MET ILE ARG THR SER ASN LYS GLN PRO SEQRES 5 B 309 ASP LYS LEU GLY CYS TYR PHE ARG TYR HIS GLU GLU ASP SEQRES 6 B 309 GLU SER GLN LEU GLY LEU ALA TRP ASP ILE ALA ARG LYS SEQRES 7 B 309 SER GLY LEU LEU SER ASP GLN GLY ARG PRO VAL ASP GLN SEQRES 8 B 309 LEU ILE PRO GLU ILE CYS GLU THR PHE PRO ILE MET ALA SEQRES 9 B 309 ASP GLY VAL ASP PHE ASP VAL LYS HIS GLY LEU ALA LYS SEQRES 10 B 309 ILE TRP GLN SER ILE LYS GLY VAL VAL PRO VAL GLN ASP SEQRES 11 B 309 ALA PHE LYS LEU SER LEU PRO ALA SER VAL THR THR HIS SEQRES 12 B 309 SER ASP PHE LEU LYS ASN HIS HIS LEU ASP ALA LEU TYR SEQRES 13 B 309 ALA PHE GLY ILE ASP TYR HIS HIS SER SER VAL ASN LEU SEQRES 14 B 309 TYR PHE ASP THR TYR HIS PRO LYS HIS HIS THR SER GLU SEQRES 15 B 309 TYR TYR LYS ASN LEU LEU GLN ASP LEU GLN PHE GLN PRO SEQRES 16 B 309 PRO SER ASP GLU LEU LEU GLU LEU LEU THR ASN ASN GLY SEQRES 17 B 309 GLU ILE ALA LEU THR PHE ASN PHE ALA SER PRO ARG ILE SEQRES 18 B 309 GLU ARG LEU CYS PHE TYR LEU PRO PHE LEU ASN ARG GLU SEQRES 19 B 309 ALA VAL PRO GLN ASN LEU LEU ASN PRO LEU LEU LYS LYS SEQRES 20 B 309 TYR ILE ASN GLU ALA PRO ALA LEU VAL ASP ASN PRO GLY SEQRES 21 B 309 PHE ILE LEU GLY TRP SER PHE GLY PRO GLN GLY GLY LYS SEQRES 22 B 309 GLY THR TYR THR LYS VAL ASP VAL ASP TYR HIS GLY ARG SEQRES 23 B 309 THR VAL PRO LEU PHE MET LYS VAL HIS SER GLN PRO LEU SEQRES 24 B 309 PRO LYS ALA ALA ASP PHE ALA LEU ALA GLN HET MG A 401 1 HET MG A 402 1 HET GST B 401 19 HET MG B 402 1 HET MG B 403 1 HET 8XL B 404 13 HETNAM MG MAGNESIUM ION HETNAM GST GERANYL S-THIOLODIPHOSPHATE HETNAM 8XL 3-[(Z)-2-ISOCYANOETHENYL]-1H-INDOLE HETSYN GST S-[(2E)-3,7-DIMETHYLOCTA-2,6-DIENYL] TRIHYDROGEN HETSYN 2 GST THIODIPHOSPHATE FORMUL 3 MG 4(MG 2+) FORMUL 5 GST C10 H20 O6 P2 S FORMUL 8 8XL C11 H8 N2 FORMUL 9 HOH *178(H2 O) HELIX 1 AA1 MET A 1 GLY A 19 1 19 HELIX 2 AA2 SER A 23 ASN A 41 1 19 HELIX 3 AA3 ASP A 65 LEU A 69 5 5 HELIX 4 AA4 GLY A 70 SER A 79 1 10 HELIX 5 AA5 ARG A 87 ASP A 90 5 4 HELIX 6 AA6 GLN A 91 PHE A 100 1 10 HELIX 7 AA7 GLN A 129 PHE A 132 5 4 HELIX 8 AA8 PRO A 137 HIS A 143 1 7 HELIX 9 AA9 HIS A 143 HIS A 150 1 8 HELIX 10 AB1 HIS A 175 HIS A 179 5 5 HELIX 11 AB2 THR A 180 LEU A 191 1 12 HELIX 12 AB3 SER A 197 THR A 205 1 9 HELIX 13 AB4 ASN A 232 VAL A 236 5 5 HELIX 14 AB5 PRO A 237 LEU A 241 5 5 HELIX 15 AB6 ASN A 242 ALA A 252 1 11 HELIX 16 AB7 ASP B 3 GLY B 19 1 17 HELIX 17 AB8 SER B 23 ASN B 41 1 19 HELIX 18 AB9 ASP B 65 LEU B 69 5 5 HELIX 19 AC1 GLY B 70 SER B 79 1 10 HELIX 20 AC2 ARG B 87 ASP B 90 5 4 HELIX 21 AC3 GLN B 91 PHE B 100 1 10 HELIX 22 AC4 GLN B 129 PHE B 132 5 4 HELIX 23 AC5 PRO B 137 HIS B 143 1 7 HELIX 24 AC6 HIS B 143 HIS B 150 1 8 HELIX 25 AC7 HIS B 175 HIS B 179 5 5 HELIX 26 AC8 THR B 180 LEU B 191 1 12 HELIX 27 AC9 SER B 197 THR B 205 1 9 HELIX 28 AD1 ASN B 232 VAL B 236 5 5 HELIX 29 AD2 PRO B 237 LEU B 241 5 5 HELIX 30 AD3 ASN B 242 ALA B 252 1 11 HELIX 31 AD4 THR B 287 MET B 292 1 6 SHEET 1 AA111 SER A 42 GLN A 51 0 SHEET 2 AA111 LYS A 54 GLU A 63 -1 O TYR A 58 N ARG A 46 SHEET 3 AA111 ILE A 102 ASP A 110 -1 O ASP A 105 N GLU A 63 SHEET 4 AA111 GLY A 114 PRO A 127 -1 O SER A 121 N ALA A 104 SHEET 5 AA111 ALA A 154 ASP A 161 -1 O TYR A 156 N ILE A 122 SHEET 6 AA111 SER A 166 PHE A 171 -1 O ASN A 168 N GLY A 159 SHEET 7 AA111 GLU A 209 ASN A 215 -1 O PHE A 214 N VAL A 167 SHEET 8 AA111 ILE A 221 PHE A 230 -1 O ARG A 223 N THR A 213 SHEET 9 AA111 PHE A 261 PHE A 267 -1 O PHE A 267 N LEU A 224 SHEET 10 AA111 TYR A 276 ASP A 282 -1 O ASP A 280 N ILE A 262 SHEET 11 AA111 SER A 42 GLN A 51 -1 N THR A 47 O VAL A 279 SHEET 1 AA211 SER B 42 SER B 48 0 SHEET 2 AA211 GLY B 56 GLU B 63 -1 O TYR B 58 N ARG B 46 SHEET 3 AA211 ILE B 102 ASP B 110 -1 O ASP B 105 N GLU B 63 SHEET 4 AA211 GLY B 114 PRO B 127 -1 O SER B 121 N ALA B 104 SHEET 5 AA211 ALA B 154 ASP B 161 -1 O ILE B 160 N ILE B 118 SHEET 6 AA211 SER B 166 ASP B 172 -1 O ASN B 168 N GLY B 159 SHEET 7 AA211 GLU B 209 ASN B 215 -1 O PHE B 214 N VAL B 167 SHEET 8 AA211 ILE B 221 PHE B 230 -1 O ARG B 223 N THR B 213 SHEET 9 AA211 PHE B 261 PHE B 267 -1 O PHE B 267 N LEU B 224 SHEET 10 AA211 TYR B 276 ASP B 282 -1 O LYS B 278 N GLY B 264 SHEET 11 AA211 SER B 42 SER B 48 -1 N THR B 47 O VAL B 279 LINK OD1 ASN A 41 MG MG A 402 1555 1555 1.98 LINK OE2 GLU A 63 MG MG A 402 1555 1555 2.22 LINK OD1 ASP A 65 MG MG A 402 1555 1555 1.97 LINK OG1 THR A 173 MG MG A 401 1555 1555 2.81 LINK OD1 ASN A 207 MG MG A 401 1555 1555 2.57 LINK O GLY A 208 MG MG A 401 1555 1555 2.32 LINK OE2 GLU A 209 MG MG A 401 1555 1555 2.80 LINK MG MG A 401 O HOH A 510 1555 1555 2.42 LINK MG MG A 401 O HOH A 538 1555 1555 2.30 LINK MG MG A 402 O HOH A 514 1555 1555 2.04 LINK MG MG A 402 O HOH A 524 1555 1555 2.06 LINK MG MG A 402 O HOH A 528 1555 1555 2.19 LINK OD1 ASN B 41 MG MG B 402 1555 1555 1.96 LINK OE1 GLU B 63 MG MG B 402 1555 1555 2.33 LINK OD2 ASP B 65 MG MG B 402 1555 1555 2.04 LINK O GLY B 208 MG MG B 403 1555 1555 2.78 LINK OE2 GLU B 209 MG MG B 403 1555 1555 2.58 LINK MG MG B 402 O HOH B 504 1555 1555 2.07 LINK MG MG B 402 O HOH B 518 1555 1555 2.27 LINK MG MG B 402 O HOH B 535 1555 1555 2.10 LINK MG MG B 403 O HOH B 510 1555 1555 2.07 SITE 1 AC1 6 THR A 173 ASN A 207 GLY A 208 GLU A 209 SITE 2 AC1 6 HOH A 510 HOH A 538 SITE 1 AC2 6 ASN A 41 GLU A 63 ASP A 65 HOH A 514 SITE 2 AC2 6 HOH A 524 HOH A 528 SITE 1 AC3 14 MET B 44 ARG B 46 ARG B 60 LYS B 117 SITE 2 AC3 14 TRP B 119 ASN B 168 TYR B 170 ARG B 223 SITE 3 AC3 14 CYS B 225 TYR B 227 ILE B 262 TYR B 276 SITE 4 AC3 14 LYS B 278 8XL B 404 SITE 1 AC4 6 ASN B 41 GLU B 63 ASP B 65 HOH B 504 SITE 2 AC4 6 HOH B 518 HOH B 535 SITE 1 AC5 5 ASP B 172 THR B 173 GLY B 208 GLU B 209 SITE 2 AC5 5 HOH B 510 SITE 1 AC6 7 HIS B 62 TRP B 119 SER B 121 TYR B 156 SITE 2 AC6 7 ALA B 157 GLU B 209 GST B 401 CRYST1 117.267 117.267 49.324 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008528 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008528 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020274 0.00000