HEADER HYDROLASE 10-JAN-18 5Z47 TITLE CRYSTAL STRUCTURE OF PYRROLIDONE CARBOXYLATE PEPTIDASE I WITH TITLE 2 DISORDERED LOOP A FROM DEINOCOCCUS RADIODURANS R1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRROLIDONE-CARBOXYLATE PEPTIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 5-OXOPROLYL-PEPTIDASE,PYROGLUTAMYL-PEPTIDASE I,PYRASE; COMPND 5 EC: 3.4.19.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS R1; SOURCE 3 ORGANISM_TAXID: 243230; SOURCE 4 STRAIN: R1; SOURCE 5 GENE: PCP, DR_0490; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PST50TR KEYWDS OMEGA PEPTIDASE, PYROGLUTAMATE, EXOPEPTIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.AGRAWAL,A.KUMAR,A.KUMAR,R.D.MAKDE REVDAT 3 22-NOV-23 5Z47 1 REMARK REVDAT 2 24-APR-19 5Z47 1 JRNL REVDAT 1 16-JAN-19 5Z47 0 JRNL AUTH R.AGRAWAL,R.SINGH,A.KUMAR,A.KUMAR,R.D.MAKDE JRNL TITL CRYSTAL STRUCTURES OF PYRROLIDONE-CARBOXYLATE PEPTIDASE I JRNL TITL 2 FROM DEINOCOCCUS RADIODURANS REVEAL THE MECHANISM OF JRNL TITL 3 L-PYROGLUTAMATE RECOGNITION. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 75 308 2019 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 30950401 JRNL DOI 10.1107/S2059798319000676 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 46547 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 2251 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7745 - 4.2798 0.95 2735 154 0.1880 0.2031 REMARK 3 2 4.2798 - 3.3985 0.99 2792 133 0.1819 0.2058 REMARK 3 3 3.3985 - 2.9694 0.99 2775 146 0.2019 0.2339 REMARK 3 4 2.9694 - 2.6981 0.99 2802 125 0.2047 0.2839 REMARK 3 5 2.6981 - 2.5048 1.00 2778 148 0.2031 0.2330 REMARK 3 6 2.5048 - 2.3572 1.00 2724 149 0.2031 0.2374 REMARK 3 7 2.3572 - 2.2392 1.00 2788 142 0.2083 0.2580 REMARK 3 8 2.2392 - 2.1417 1.00 2736 163 0.2043 0.2415 REMARK 3 9 2.1417 - 2.0593 1.00 2772 136 0.2122 0.2270 REMARK 3 10 2.0593 - 1.9883 1.00 2770 146 0.2257 0.2692 REMARK 3 11 1.9883 - 1.9261 1.00 2772 147 0.2311 0.2562 REMARK 3 12 1.9261 - 1.8711 1.00 2772 130 0.2451 0.2830 REMARK 3 13 1.8711 - 1.8218 1.00 2782 126 0.2425 0.2776 REMARK 3 14 1.8218 - 1.7774 1.00 2759 149 0.2416 0.2839 REMARK 3 15 1.7774 - 1.7370 1.00 2768 132 0.2579 0.2923 REMARK 3 16 1.7370 - 1.7000 1.00 2771 125 0.2687 0.3214 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3202 REMARK 3 ANGLE : 0.871 4400 REMARK 3 CHIRALITY : 0.056 500 REMARK 3 PLANARITY : 0.006 588 REMARK 3 DIHEDRAL : 14.604 1911 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.1702 -11.1180 10.7574 REMARK 3 T TENSOR REMARK 3 T11: 0.1173 T22: 0.0847 REMARK 3 T33: 0.0935 T12: -0.0388 REMARK 3 T13: -0.0041 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 7.0438 L22: 3.2678 REMARK 3 L33: 5.4239 L12: 0.7605 REMARK 3 L13: 1.2058 L23: -0.6871 REMARK 3 S TENSOR REMARK 3 S11: 0.0079 S12: 0.0112 S13: 0.1119 REMARK 3 S21: 0.0786 S22: 0.0083 S23: 0.1628 REMARK 3 S31: -0.2696 S32: 0.0428 S33: 0.0350 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6833 -13.3751 4.4715 REMARK 3 T TENSOR REMARK 3 T11: 0.1508 T22: 0.1254 REMARK 3 T33: 0.1201 T12: -0.0082 REMARK 3 T13: 0.0011 T23: -0.0148 REMARK 3 L TENSOR REMARK 3 L11: 1.6576 L22: 1.0532 REMARK 3 L33: 1.8776 L12: 0.3199 REMARK 3 L13: 0.5126 L23: 0.0352 REMARK 3 S TENSOR REMARK 3 S11: -0.0673 S12: 0.1637 S13: 0.0737 REMARK 3 S21: -0.0094 S22: 0.0552 S23: -0.1160 REMARK 3 S31: -0.1691 S32: 0.2591 S33: 0.0166 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.5749 -3.7678 -10.1316 REMARK 3 T TENSOR REMARK 3 T11: 0.5085 T22: 0.3838 REMARK 3 T33: 0.5639 T12: -0.0363 REMARK 3 T13: -0.1386 T23: -0.0347 REMARK 3 L TENSOR REMARK 3 L11: 7.2543 L22: 3.1286 REMARK 3 L33: 6.7303 L12: 0.1769 REMARK 3 L13: 1.2987 L23: 4.4474 REMARK 3 S TENSOR REMARK 3 S11: -0.1791 S12: -0.2648 S13: 1.4406 REMARK 3 S21: 0.1638 S22: -0.7583 S23: 0.3642 REMARK 3 S31: -1.2774 S32: -0.3824 S33: 0.9768 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 106 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.7611 -23.0127 -0.4551 REMARK 3 T TENSOR REMARK 3 T11: 0.1339 T22: 0.0997 REMARK 3 T33: 0.1417 T12: -0.0163 REMARK 3 T13: -0.0091 T23: -0.0452 REMARK 3 L TENSOR REMARK 3 L11: 1.7711 L22: 0.2509 REMARK 3 L33: 5.1917 L12: -0.2924 REMARK 3 L13: -0.3750 L23: -0.3314 REMARK 3 S TENSOR REMARK 3 S11: 0.0688 S12: 0.0429 S13: -0.0243 REMARK 3 S21: -0.0494 S22: 0.0248 S23: 0.0239 REMARK 3 S31: 0.0624 S32: 0.1149 S33: -0.1118 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 143 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3018 -12.8645 -6.0237 REMARK 3 T TENSOR REMARK 3 T11: 0.1285 T22: 0.1362 REMARK 3 T33: 0.1168 T12: -0.0381 REMARK 3 T13: -0.0001 T23: -0.0339 REMARK 3 L TENSOR REMARK 3 L11: 2.0406 L22: 3.2187 REMARK 3 L33: 6.0512 L12: -0.0015 REMARK 3 L13: -0.2672 L23: -1.6864 REMARK 3 S TENSOR REMARK 3 S11: -0.0223 S12: 0.0799 S13: 0.0089 REMARK 3 S21: -0.0522 S22: 0.0753 S23: -0.1472 REMARK 3 S31: -0.0474 S32: 0.4312 S33: -0.1316 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.7235 -13.7061 5.9184 REMARK 3 T TENSOR REMARK 3 T11: 0.1186 T22: 0.0641 REMARK 3 T33: 0.1101 T12: -0.0040 REMARK 3 T13: -0.0022 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 2.0364 L22: 1.3017 REMARK 3 L33: 2.9481 L12: -0.3739 REMARK 3 L13: -1.8150 L23: 0.5808 REMARK 3 S TENSOR REMARK 3 S11: 0.1120 S12: -0.0070 S13: 0.2300 REMARK 3 S21: -0.0048 S22: 0.0308 S23: 0.0685 REMARK 3 S31: -0.1577 S32: 0.0215 S33: -0.1458 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 192 THROUGH 210 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.0189 -22.6188 12.5999 REMARK 3 T TENSOR REMARK 3 T11: 0.1195 T22: 0.0988 REMARK 3 T33: 0.1142 T12: -0.0360 REMARK 3 T13: -0.0382 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 4.9262 L22: 8.4845 REMARK 3 L33: 5.7078 L12: -5.9301 REMARK 3 L13: -3.9217 L23: 3.2839 REMARK 3 S TENSOR REMARK 3 S11: -0.1811 S12: -0.2170 S13: 0.2267 REMARK 3 S21: 0.2810 S22: 0.2154 S23: -0.3088 REMARK 3 S31: 0.2111 S32: 0.2881 S33: 0.0667 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.7999 -28.8945 -28.0194 REMARK 3 T TENSOR REMARK 3 T11: 0.1113 T22: 0.0685 REMARK 3 T33: 0.1108 T12: -0.0094 REMARK 3 T13: -0.0137 T23: -0.0505 REMARK 3 L TENSOR REMARK 3 L11: 4.9951 L22: 4.1849 REMARK 3 L33: 5.7483 L12: -0.5075 REMARK 3 L13: -0.1902 L23: 0.2690 REMARK 3 S TENSOR REMARK 3 S11: 0.0292 S12: 0.1262 S13: -0.2996 REMARK 3 S21: 0.0271 S22: -0.0051 S23: 0.0630 REMARK 3 S31: 0.1798 S32: -0.1040 S33: -0.0070 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.8112 -29.7610 -31.4544 REMARK 3 T TENSOR REMARK 3 T11: 0.1757 T22: 0.1601 REMARK 3 T33: 0.1234 T12: -0.0076 REMARK 3 T13: -0.0017 T23: -0.0619 REMARK 3 L TENSOR REMARK 3 L11: 3.4860 L22: 2.6231 REMARK 3 L33: 2.3579 L12: 0.1485 REMARK 3 L13: 1.2279 L23: -0.6799 REMARK 3 S TENSOR REMARK 3 S11: -0.0481 S12: 0.2578 S13: -0.2098 REMARK 3 S21: -0.0613 S22: 0.0552 S23: -0.1012 REMARK 3 S31: 0.0477 S32: 0.2192 S33: -0.0506 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 62 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.1169 -21.7274 -19.6606 REMARK 3 T TENSOR REMARK 3 T11: 0.0789 T22: 0.0998 REMARK 3 T33: 0.1043 T12: -0.0057 REMARK 3 T13: -0.0019 T23: -0.0205 REMARK 3 L TENSOR REMARK 3 L11: 1.2757 L22: 1.6212 REMARK 3 L33: 2.0676 L12: 0.3431 REMARK 3 L13: 0.1725 L23: -0.5597 REMARK 3 S TENSOR REMARK 3 S11: -0.0251 S12: -0.0170 S13: 0.0386 REMARK 3 S21: -0.0056 S22: 0.0830 S23: -0.1017 REMARK 3 S31: -0.0761 S32: 0.2778 S33: -0.0636 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 86 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.8224 -36.1476 -10.6195 REMARK 3 T TENSOR REMARK 3 T11: 0.6999 T22: 0.4293 REMARK 3 T33: 0.4224 T12: 0.0139 REMARK 3 T13: -0.0268 T23: -0.0799 REMARK 3 L TENSOR REMARK 3 L11: 3.8072 L22: 8.0535 REMARK 3 L33: 4.7090 L12: 5.0124 REMARK 3 L13: 2.0092 L23: 0.5502 REMARK 3 S TENSOR REMARK 3 S11: 0.6709 S12: -0.3383 S13: -0.6155 REMARK 3 S21: 0.5635 S22: -0.6444 S23: 0.4275 REMARK 3 S31: 1.3023 S32: -0.2956 S33: -0.1859 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 106 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.4282 -17.0808 -19.0339 REMARK 3 T TENSOR REMARK 3 T11: 0.1517 T22: 0.1042 REMARK 3 T33: 0.1237 T12: -0.0235 REMARK 3 T13: -0.0014 T23: -0.0444 REMARK 3 L TENSOR REMARK 3 L11: 4.4193 L22: 0.4243 REMARK 3 L33: 2.4978 L12: -0.0904 REMARK 3 L13: 1.5684 L23: -0.5901 REMARK 3 S TENSOR REMARK 3 S11: -0.0307 S12: 0.0255 S13: -0.0736 REMARK 3 S21: 0.0723 S22: 0.0559 S23: -0.0148 REMARK 3 S31: -0.0665 S32: 0.1408 S33: -0.0034 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 143 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.4625 -27.1021 -22.8667 REMARK 3 T TENSOR REMARK 3 T11: 0.1169 T22: 0.1564 REMARK 3 T33: 0.1220 T12: -0.0127 REMARK 3 T13: -0.0127 T23: -0.0375 REMARK 3 L TENSOR REMARK 3 L11: 4.7782 L22: 4.5741 REMARK 3 L33: 8.2463 L12: -1.3513 REMARK 3 L13: -4.2474 L23: -0.0395 REMARK 3 S TENSOR REMARK 3 S11: -0.1382 S12: 0.1769 S13: -0.0236 REMARK 3 S21: -0.0048 S22: 0.2093 S23: -0.1706 REMARK 3 S31: 0.0181 S32: 0.2591 S33: -0.0619 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 158 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.7813 -26.2102 -15.9527 REMARK 3 T TENSOR REMARK 3 T11: 0.1655 T22: 0.1245 REMARK 3 T33: 0.1343 T12: -0.0152 REMARK 3 T13: -0.0217 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 5.5862 L22: 1.0683 REMARK 3 L33: 1.0768 L12: 0.7638 REMARK 3 L13: -1.8662 L23: -0.2831 REMARK 3 S TENSOR REMARK 3 S11: 0.0288 S12: -0.1773 S13: -0.3089 REMARK 3 S21: 0.0735 S22: -0.0955 S23: -0.0260 REMARK 3 S31: -0.0682 S32: 0.1577 S33: 0.1105 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 192 THROUGH 210 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.0548 -17.2760 -27.6643 REMARK 3 T TENSOR REMARK 3 T11: 0.1416 T22: 0.1233 REMARK 3 T33: 0.1068 T12: -0.0029 REMARK 3 T13: -0.0341 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 3.8037 L22: 8.7472 REMARK 3 L33: 5.2706 L12: 4.7402 REMARK 3 L13: -4.2130 L23: -4.5929 REMARK 3 S TENSOR REMARK 3 S11: -0.1429 S12: 0.1446 S13: 0.1352 REMARK 3 S21: -0.3235 S22: 0.0951 S23: 0.0543 REMARK 3 S31: -0.0209 S32: 0.0005 S33: -0.0498 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5Z47 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1300006436. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : RRCAT INDUS-2 REMARK 200 BEAMLINE : PX-BL21 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979470 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46549 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 38.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5Z40 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 0.1M BIS-TRIS PH 6.5, 25% REMARK 280 PEG 3350, MICROBATCH, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 30.41479 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.58550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 50.80976 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 30.41479 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.58550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 50.80976 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -89.31700 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 585 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 571 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 12 REMARK 465 HIS A 13 REMARK 465 THR A 14 REMARK 465 HIS A 15 REMARK 465 SER A 211 REMARK 465 VAL A 212 REMARK 465 LEU A 213 REMARK 465 GLN A 214 REMARK 465 MET A 215 REMARK 465 GLY A 216 REMARK 465 LYS A 217 REMARK 465 MET A 218 REMARK 465 GLY B -1 REMARK 465 PHE B 12 REMARK 465 HIS B 13 REMARK 465 THR B 14 REMARK 465 HIS B 15 REMARK 465 SER B 211 REMARK 465 VAL B 212 REMARK 465 LEU B 213 REMARK 465 GLN B 214 REMARK 465 MET B 215 REMARK 465 GLY B 216 REMARK 465 LYS B 217 REMARK 465 MET B 218 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 45 53.99 -92.49 REMARK 500 TYR A 142 -157.56 -90.03 REMARK 500 VAL B 45 56.65 -91.23 REMARK 500 TYR B 142 -158.99 -91.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 585 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 586 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH B 571 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B 572 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B 573 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH B 574 DISTANCE = 7.28 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 301 DBREF 5Z47 A 1 218 UNP Q9RX25 PCP_DEIRA 1 218 DBREF 5Z47 B 1 218 UNP Q9RX25 PCP_DEIRA 1 218 SEQADV 5Z47 GLY A -1 UNP Q9RX25 EXPRESSION TAG SEQADV 5Z47 SER A 0 UNP Q9RX25 EXPRESSION TAG SEQADV 5Z47 GLY B -1 UNP Q9RX25 EXPRESSION TAG SEQADV 5Z47 SER B 0 UNP Q9RX25 EXPRESSION TAG SEQRES 1 A 220 GLY SER MET PRO THR LEU LEU LEU THR GLY PHE GLU PRO SEQRES 2 A 220 PHE HIS THR HIS PRO ASP ASN PRO SER ALA GLN ALA ALA SEQRES 3 A 220 GLN GLU LEU HIS GLY LEU GLU LEU PRO GLY GLY TRP GLY SEQRES 4 A 220 VAL HIS SER ALA LEU LEU PRO VAL GLU PRO HIS ALA ALA SEQRES 5 A 220 GLY ALA ALA LEU THR ARG LEU LEU SER GLU GLN ASP PRO SEQRES 6 A 220 GLY ALA VAL LEU LEU THR GLY LEU ALA ALA GLY ARG PRO SEQRES 7 A 220 GLN VAL THR LEU GLU ARG VAL GLY VAL GLY VAL MET ASP SEQRES 8 A 220 PHE GLN ILE PRO ASP ASN ALA GLY GLN THR TYR ARG ASP SEQRES 9 A 220 GLN PRO ILE GLU PRO ASP ALA PRO ALA ALA TYR LEU ALA SEQRES 10 A 220 THR LEU PRO LEU ARG ALA ILE LEU ALA ALA TRP ARG GLU SEQRES 11 A 220 ALA GLU ILE PRO GLY ASP ILE SER ASN SER ALA GLY LEU SEQRES 12 A 220 TYR VAL CSX ASN PHE VAL LEU TYR HIS ALA LEU HIS TRP SEQRES 13 A 220 LEU ARG GLU HIS GLY ARG GLY ALA VAL PRO CYS GLY PHE SEQRES 14 A 220 LEU HIS VAL PRO ALA ASN ALA ALA VAL ALA LEU ALA VAL SEQRES 15 A 220 PRO ALA ASP ARG PRO PRO LEU PRO TYR LEU PRO GLN SER SEQRES 16 A 220 GLU ILE THR ARG ALA VAL ARG VAL ALA ALA GLU ALA ILE SEQRES 17 A 220 THR ALA GLN SER SER VAL LEU GLN MET GLY LYS MET SEQRES 1 B 220 GLY SER MET PRO THR LEU LEU LEU THR GLY PHE GLU PRO SEQRES 2 B 220 PHE HIS THR HIS PRO ASP ASN PRO SER ALA GLN ALA ALA SEQRES 3 B 220 GLN GLU LEU HIS GLY LEU GLU LEU PRO GLY GLY TRP GLY SEQRES 4 B 220 VAL HIS SER ALA LEU LEU PRO VAL GLU PRO HIS ALA ALA SEQRES 5 B 220 GLY ALA ALA LEU THR ARG LEU LEU SER GLU GLN ASP PRO SEQRES 6 B 220 GLY ALA VAL LEU LEU THR GLY LEU ALA ALA GLY ARG PRO SEQRES 7 B 220 GLN VAL THR LEU GLU ARG VAL GLY VAL GLY VAL MET ASP SEQRES 8 B 220 PHE GLN ILE PRO ASP ASN ALA GLY GLN THR TYR ARG ASP SEQRES 9 B 220 GLN PRO ILE GLU PRO ASP ALA PRO ALA ALA TYR LEU ALA SEQRES 10 B 220 THR LEU PRO LEU ARG ALA ILE LEU ALA ALA TRP ARG GLU SEQRES 11 B 220 ALA GLU ILE PRO GLY ASP ILE SER ASN SER ALA GLY LEU SEQRES 12 B 220 TYR VAL CSX ASN PHE VAL LEU TYR HIS ALA LEU HIS TRP SEQRES 13 B 220 LEU ARG GLU HIS GLY ARG GLY ALA VAL PRO CYS GLY PHE SEQRES 14 B 220 LEU HIS VAL PRO ALA ASN ALA ALA VAL ALA LEU ALA VAL SEQRES 15 B 220 PRO ALA ASP ARG PRO PRO LEU PRO TYR LEU PRO GLN SER SEQRES 16 B 220 GLU ILE THR ARG ALA VAL ARG VAL ALA ALA GLU ALA ILE SEQRES 17 B 220 THR ALA GLN SER SER VAL LEU GLN MET GLY LYS MET MODRES 5Z47 CSX A 144 CYS MODIFIED RESIDUE MODRES 5Z47 CSX B 144 CYS MODIFIED RESIDUE HET CSX A 144 11 HET CSX B 144 12 HET DMS A 301 4 HET DMS B 301 4 HETNAM CSX S-OXY CYSTEINE HETNAM DMS DIMETHYL SULFOXIDE FORMUL 1 CSX 2(C3 H7 N O3 S) FORMUL 3 DMS 2(C2 H6 O S) FORMUL 5 HOH *360(H2 O) HELIX 1 AA1 ASN A 18 HIS A 28 1 11 HELIX 2 AA2 PRO A 33 GLY A 35 5 3 HELIX 3 AA3 GLU A 46 ASP A 62 1 17 HELIX 4 AA4 PRO A 118 ALA A 129 1 12 HELIX 5 AA5 TYR A 142 HIS A 158 1 17 HELIX 6 AA6 ASN A 173 ALA A 179 1 7 HELIX 7 AA7 PRO A 191 SER A 210 1 20 HELIX 8 AA8 ASN B 18 HIS B 28 1 11 HELIX 9 AA9 LEU B 32 TRP B 36 5 5 HELIX 10 AB1 GLU B 46 ASP B 62 1 17 HELIX 11 AB2 PRO B 118 ALA B 129 1 12 HELIX 12 AB3 TYR B 142 HIS B 158 1 17 HELIX 13 AB4 ASN B 173 ALA B 179 1 7 HELIX 14 AB5 PRO B 191 SER B 210 1 20 SHEET 1 AA1 7 GLU A 31 LEU A 32 0 SHEET 2 AA1 7 TRP A 36 LEU A 43 -1 O TRP A 36 N LEU A 32 SHEET 3 AA1 7 THR A 3 PHE A 9 1 N GLY A 8 O LEU A 43 SHEET 4 AA1 7 ALA A 65 LEU A 71 1 O LEU A 67 N LEU A 5 SHEET 5 AA1 7 CYS A 165 VAL A 170 1 O VAL A 170 N GLY A 70 SHEET 6 AA1 7 VAL A 78 GLU A 81 -1 N GLU A 81 O PHE A 167 SHEET 7 AA1 7 GLY A 133 SER A 136 1 O SER A 136 N LEU A 80 SHEET 1 AA2 2 VAL A 83 VAL A 85 0 SHEET 2 AA2 2 ALA A 112 LEU A 114 -1 O TYR A 113 N GLY A 84 SHEET 1 AA3 2 VAL A 87 MET A 88 0 SHEET 2 AA3 2 GLN A 103 PRO A 104 -1 O GLN A 103 N MET A 88 SHEET 1 AA4 6 GLY B 37 LEU B 43 0 SHEET 2 AA4 6 THR B 3 PHE B 9 1 N GLY B 8 O LEU B 43 SHEET 3 AA4 6 ALA B 65 LEU B 71 1 O LEU B 67 N LEU B 5 SHEET 4 AA4 6 CYS B 165 VAL B 170 1 O VAL B 170 N GLY B 70 SHEET 5 AA4 6 VAL B 78 GLU B 81 -1 N GLU B 81 O PHE B 167 SHEET 6 AA4 6 GLY B 133 SER B 136 1 O SER B 136 N LEU B 80 SHEET 1 AA5 2 VAL B 83 VAL B 85 0 SHEET 2 AA5 2 ALA B 112 LEU B 114 -1 O TYR B 113 N GLY B 84 SHEET 1 AA6 2 VAL B 87 MET B 88 0 SHEET 2 AA6 2 GLN B 103 PRO B 104 -1 O GLN B 103 N MET B 88 LINK C VAL A 143 N CSX A 144 1555 1555 1.33 LINK C CSX A 144 N ASN A 145 1555 1555 1.33 LINK C VAL B 143 N CSX B 144 1555 1555 1.32 LINK C CSX B 144 N ASN B 145 1555 1555 1.32 SITE 1 AC1 6 PHE A 9 ASN A 18 VAL A 45 GLY A 70 SITE 2 AC1 6 LEU A 71 CSX A 144 SITE 1 AC2 5 ASN B 18 VAL B 45 GLY B 70 LEU B 71 SITE 2 AC2 5 CSX B 144 CRYST1 89.317 47.171 105.537 90.00 105.66 90.00 I 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011196 0.000000 0.003139 0.00000 SCALE2 0.000000 0.021199 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009841 0.00000