HEADER HYDROLASE 18-JAN-18 5Z5I TITLE CRYSTAL STRUCTURE OF A THERMOSTABLE GLYCOSIDE HYDROLASE FAMILY 43 TITLE 2 {BETA}-1,4-XYLOSIDASE FROM GEOBACILLUS THERMOLEOVORANS IT-08 IN TITLE 3 COMPLEX WITH L-ARABINOSE AND D-XYLOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-XYLOSIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: {BETA}-1,4-XYLOSIDASE; COMPND 5 EC: 3.2.1.37; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS THERMOLEOVORANS; SOURCE 3 ORGANISM_COMMON: BACILLUS THERMOLEOVORANS; SOURCE 4 ORGANISM_TAXID: 33941; SOURCE 5 GENE: XYL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS XYLANOLYTIC, GH43, OLIGOSACCHARIDE, SACCHARIFICATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.ROHMAN,N.VAN OOSTERWIJK,N.N.T.PUSPANINGSIH,B.W.DIJKSTRA REVDAT 4 22-NOV-23 5Z5I 1 HETSYN REVDAT 3 29-JUL-20 5Z5I 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 16-MAY-18 5Z5I 1 JRNL REVDAT 1 25-APR-18 5Z5I 0 JRNL AUTH A.ROHMAN,N.VAN OOSTERWIJK,N.N.T.PUSPANINGSIH,B.W.DIJKSTRA JRNL TITL STRUCTURAL BASIS OF PRODUCT INHIBITION BY ARABINOSE AND JRNL TITL 2 XYLOSE OF THE THERMOSTABLE GH43 BETA-1,4-XYLOSIDASE FROM JRNL TITL 3 GEOBACILLUS THERMOLEOVORANS IT-08. JRNL REF PLOS ONE V. 13 96358 2018 JRNL REFN ESSN 1932-6203 JRNL PMID 29698436 JRNL DOI 10.1371/JOURNAL.PONE.0196358 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.ROHMAN,N.VAN OOSTERWIJK,S.KRALJ,L.DIJKHUIZEN,B.W.DIJKSTRA, REMARK 1 AUTH 2 N.N.PUSPANINGSIH REMARK 1 TITL PURIFICATION, CRYSTALLIZATION AND PRELIMINARY X-RAY ANALYSIS REMARK 1 TITL 2 OF A THERMOSTABLE GLYCOSIDE HYDROLASE FAMILY 43 REMARK 1 TITL 3 BETA-XYLOSIDASE FROM GEOBACILLUS THERMOLEOVORANS IT-08. REMARK 1 REF ACTA CRYSTALLOGR. SECT. F V. 63 932 2007 REMARK 1 REF 2 STRUCT. BIOL. CRYST. COMMUN. REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 18007043 REMARK 1 DOI 10.1107/S1744309107046015 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 54015 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2860 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3369 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.2150 REMARK 3 BIN FREE R VALUE SET COUNT : 186 REMARK 3 BIN FREE R VALUE : 0.2350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4053 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 516 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.42000 REMARK 3 B22 (A**2) : 0.42000 REMARK 3 B33 (A**2) : -0.83000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.097 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.060 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.810 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4256 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5800 ; 1.440 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 516 ; 6.789 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 202 ;32.031 ;24.109 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 667 ;13.199 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;14.848 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 620 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3269 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5Z5I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1300006510. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9334 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : COMBAT REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57020 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.695 REMARK 200 RESOLUTION RANGE LOW (A) : 41.937 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.27300 REMARK 200 R SYM FOR SHELL (I) : 0.27300 REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1YIF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES (N-(2 REMARK 280 -HYDROXYETHYL)PIPERAZINE-N-(2-ETHANESULFONIC ACID)) BUFFER, PH REMARK 280 7.0, 5% (W/V) PEG 6000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 138.93500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 29.90800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 29.90800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 208.40250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 29.90800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 29.90800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 69.46750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 29.90800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 29.90800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 208.40250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 29.90800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 29.90800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 69.46750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 138.93500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 59.81600 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -59.81600 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 305 REMARK 465 LYS A 306 REMARK 465 ASN A 307 REMARK 465 ILE A 308 REMARK 465 GLY A 309 REMARK 465 ASP A 310 REMARK 465 ILE A 511 REMARK 465 LYS A 512 REMARK 465 GLY A 513 REMARK 465 GLU A 514 REMARK 465 LEU A 515 REMARK 465 ASN A 516 REMARK 465 SER A 517 REMARK 465 LYS A 518 REMARK 465 LEU A 519 REMARK 465 GLU A 520 REMARK 465 GLY A 521 REMARK 465 LYS A 522 REMARK 465 PRO A 523 REMARK 465 ILE A 524 REMARK 465 PRO A 525 REMARK 465 ASN A 526 REMARK 465 PRO A 527 REMARK 465 LEU A 528 REMARK 465 LEU A 529 REMARK 465 GLY A 530 REMARK 465 LEU A 531 REMARK 465 ASP A 532 REMARK 465 SER A 533 REMARK 465 THR A 534 REMARK 465 ARG A 535 REMARK 465 THR A 536 REMARK 465 GLY A 537 REMARK 465 HIS A 538 REMARK 465 HIS A 539 REMARK 465 HIS A 540 REMARK 465 HIS A 541 REMARK 465 HIS A 542 REMARK 465 HIS A 543 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 11 86.44 -69.98 REMARK 500 PHE A 31 -121.79 59.24 REMARK 500 VAL A 37 78.93 58.17 REMARK 500 LEU A 45 -10.69 71.38 REMARK 500 ASN A 68 2.92 -68.58 REMARK 500 SER A 70 -144.57 -140.67 REMARK 500 PHE A 73 -159.10 -90.84 REMARK 500 ASP A 103 107.59 -160.70 REMARK 500 THR A 197 32.54 -79.85 REMARK 500 GLU A 198 -146.12 -123.32 REMARK 500 HIS A 238 62.05 60.36 REMARK 500 SER A 260 -176.87 69.11 REMARK 500 GLN A 330 -163.80 58.84 REMARK 500 SER A 344 2.61 83.78 REMARK 500 SER A 344 3.71 82.88 REMARK 500 SER A 360 82.63 4.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1216 DISTANCE = 6.49 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 316 O REMARK 620 2 SER A 344 O 82.9 REMARK 620 3 ASP A 503 O 75.5 98.3 REMARK 620 4 ASP A 503 OD1 149.1 96.0 74.1 REMARK 620 5 HOH A 736 O 80.3 101.5 146.4 129.7 REMARK 620 6 HOH A 787 O 143.7 83.1 139.7 65.8 70.0 REMARK 620 7 HOH A1061 O 104.5 172.5 84.4 78.0 79.4 90.3 REMARK 620 N 1 2 3 4 5 6 DBREF 5Z5I A 1 511 UNP Q2I2N4 Q2I2N4_GEOTH 1 511 SEQADV 5Z5I LYS A 512 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I GLY A 513 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I GLU A 514 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I LEU A 515 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I ASN A 516 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I SER A 517 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I LYS A 518 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I LEU A 519 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I GLU A 520 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I GLY A 521 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I LYS A 522 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I PRO A 523 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I ILE A 524 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I PRO A 525 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I ASN A 526 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I PRO A 527 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I LEU A 528 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I LEU A 529 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I GLY A 530 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I LEU A 531 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I ASP A 532 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I SER A 533 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I THR A 534 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I ARG A 535 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I THR A 536 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I GLY A 537 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I HIS A 538 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I HIS A 539 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I HIS A 540 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I HIS A 541 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I HIS A 542 UNP Q2I2N4 EXPRESSION TAG SEQADV 5Z5I HIS A 543 UNP Q2I2N4 EXPRESSION TAG SEQRES 1 A 543 MET GLU TYR SER ASN PRO VAL ILE LYS GLY PHE TYR PRO SEQRES 2 A 543 ASP PRO SER ILE CYS ARG VAL GLY SER ASP TYR TYR LEU SEQRES 3 A 543 VAL THR SER SER PHE GLN TYR PHE PRO GLY VAL PRO ILE SEQRES 4 A 543 PHE HIS SER THR ASN LEU ILE ASN TRP ASN LYS ILE GLY SEQRES 5 A 543 TYR CYS LEU ILE ARG PRO SER GLN LEU MET LEU ASN ASN SEQRES 6 A 543 ALA THR ASN ARG SER GLY ILE PHE ALA PRO THR LEU ARG SEQRES 7 A 543 TYR HIS GLU GLY ILE PHE TYR LEU ILE THR THR ASN VAL SEQRES 8 A 543 THR LEU LYS LYS ASN PHE ILE VAL MET SER GLU ASP LEU SEQRES 9 A 543 GLN GLY GLU TRP SER GLU PRO ILE TRP ILE ASP GLY TRP SEQRES 10 A 543 GLY GLY ILE ASP PRO SER LEU PHE PHE ASP ASN ASP GLY SEQRES 11 A 543 LYS VAL TYR ILE THR GLY THR ASN ASP ASN ALA ARG GLY SEQRES 12 A 543 GLU GLU LEU GLY ILE TYR GLN ALA GLU ILE ASP LEU LYS SEQRES 13 A 543 LYS GLY SER ILE ILE GLY GLU ARG LYS LEU ILE TRP LYS SEQRES 14 A 543 GLY THR GLY GLY SER TYR PRO GLU ALA PRO HIS LEU TYR SEQRES 15 A 543 LYS VAL ASN GLY TRP TYR TYR LEU LEU ILE ALA GLU GLY SEQRES 16 A 543 GLY THR GLU TYR GLY HIS MET VAL THR VAL ALA ARG SER SEQRES 17 A 543 LYS TYR PRO PHE GLY PRO PHE GLU SER CYS PRO PHE ASN SEQRES 18 A 543 PRO ILE LEU THR HIS ARG SER THR ASN HIS PRO LEU GLN SEQRES 19 A 543 ALA ILE GLY HIS ALA ASP ILE VAL GLN TYR HIS ASP GLY SEQRES 20 A 543 SER TRP TRP ALA VAL PHE HIS GLY THR ARG PRO ILE SER SEQRES 21 A 543 TYR PRO PRO LYS HIS HIS LEU GLY ARG GLU THR CYS LEU SEQRES 22 A 543 ALA PRO ILE LYS TRP THR ASP ASP GLY TRP PRO ILE ILE SEQRES 23 A 543 GLY TYR ASN GLY ARG ILE ASP ILE LYS MET ASP ALA GLY SEQRES 24 A 543 TYR LEU PRO VAL LYS GLU LYS ASN ILE GLY ASP GLU ILE SEQRES 25 A 543 ILE GLU ASP ASP PHE ASN SER ASP ILE PHE SER THR ASP SEQRES 26 A 543 TRP ASN PHE ILE GLN ASN PRO ARG LEU GLU HIS TYR SER SEQRES 27 A 543 LEU LYS GLY ARG PRO SER TRP LEU LYS MET ARG GLY THR SEQRES 28 A 543 GLU LYS THR LEU ASN ASP ILE ASN SER PRO THR PHE ILE SEQRES 29 A 543 GLY ARG ARG GLN GLU HIS PHE VAL CYS ASN VAL SER THR SEQRES 30 A 543 LEU LEU GLU PHE LYS PRO ASN GLN ASP ASN GLU GLU ALA SEQRES 31 A 543 GLY LEU THR VAL TYR MET ASN GLU LYS HIS HIS TYR GLU SEQRES 32 A 543 ILE ALA LEU THR LYS LYS ASN GLY ARG ILE ASN VAL VAL SEQRES 33 A 543 LEU LYS LYS THR VAL GLY ASP ILE GLN VAL VAL VAL ASN SEQRES 34 A 543 SER LEU GLU TYR PHE SER ASN THR ILE ILE PHE SER ILE SEQRES 35 A 543 GLN ALA ASN PRO GLU GLU TYR LYS PHE SER PHE VAL ASP SEQRES 36 A 543 PRO ASN THR GLY GLN THR TYR LEU LEU GLY THR GLY LEU SEQRES 37 A 543 THR THR LEU LEU SER THR GLU VAL ALA GLY GLY PHE THR SEQRES 38 A 543 GLY VAL TYR PHE GLY LEU TYR ALA THR GLY ASN GLY LYS SEQRES 39 A 543 VAL CYS THR ALA PRO ALA PHE PHE ASP TRP PHE LYS TYR SEQRES 40 A 543 ILE PRO GLU ILE LYS GLY GLU LEU ASN SER LYS LEU GLU SEQRES 41 A 543 GLY LYS PRO ILE PRO ASN PRO LEU LEU GLY LEU ASP SER SEQRES 42 A 543 THR ARG THR GLY HIS HIS HIS HIS HIS HIS HET CA A 601 1 HET FUB A 602 10 HET XYS A 603 10 HET XYP A 604 10 HET XYP A 605 10 HETNAM CA CALCIUM ION HETNAM FUB BETA-L-ARABINOFURANOSE HETNAM XYS ALPHA-D-XYLOPYRANOSE HETNAM XYP BETA-D-XYLOPYRANOSE HETSYN FUB BETA-L-ARABINOSE; L-ARABINOSE; ARABINOSE HETSYN XYS ALPHA-D-XYLOSE; D-XYLOSE; XYLOSE; XYLOPYRANOSE HETSYN XYP BETA-D-XYLOSE; D-XYLOSE; XYLOSE FORMUL 2 CA CA 2+ FORMUL 3 FUB C5 H10 O5 FORMUL 4 XYS C5 H10 O5 FORMUL 5 XYP 2(C5 H10 O5) FORMUL 7 HOH *516(H2 O) HELIX 1 AA1 ARG A 333 GLU A 335 5 3 HELIX 2 AA2 THR A 470 LEU A 472 5 3 HELIX 3 AA3 SER A 473 GLY A 478 1 6 SHEET 1 AA1 2 GLU A 2 SER A 4 0 SHEET 2 AA1 2 LYS A 295 ASP A 297 -1 O MET A 296 N TYR A 3 SHEET 1 AA2 4 SER A 16 VAL A 20 0 SHEET 2 AA2 4 ASP A 23 VAL A 27 -1 O ASP A 23 N VAL A 20 SHEET 3 AA2 4 GLY A 36 SER A 42 -1 O PHE A 40 N LEU A 26 SHEET 4 AA2 4 ASN A 49 LEU A 55 -1 O LEU A 55 N GLY A 36 SHEET 1 AA3 2 TYR A 33 PHE A 34 0 SHEET 2 AA3 2 PHE A 328 ILE A 329 -1 O PHE A 328 N PHE A 34 SHEET 1 AA4 4 THR A 76 HIS A 80 0 SHEET 2 AA4 4 ILE A 83 ASN A 90 -1 O TYR A 85 N ARG A 78 SHEET 3 AA4 4 LYS A 95 SER A 101 -1 O SER A 101 N PHE A 84 SHEET 4 AA4 4 ILE A 112 TRP A 113 -1 O ILE A 112 N ILE A 98 SHEET 1 AA5 4 SER A 123 PHE A 126 0 SHEET 2 AA5 4 VAL A 132 THR A 137 -1 O TYR A 133 N PHE A 125 SHEET 3 AA5 4 ILE A 148 ASP A 154 -1 O ALA A 151 N ILE A 134 SHEET 4 AA5 4 SER A 159 TRP A 168 -1 O ILE A 167 N ILE A 148 SHEET 1 AA6 4 GLU A 177 VAL A 184 0 SHEET 2 AA6 4 TRP A 187 GLU A 194 -1 O LEU A 191 N HIS A 180 SHEET 3 AA6 4 MET A 202 SER A 208 -1 O SER A 208 N TYR A 188 SHEET 4 AA6 4 GLU A 216 SER A 217 -1 O GLU A 216 N ARG A 207 SHEET 1 AA7 4 GLU A 177 VAL A 184 0 SHEET 2 AA7 4 TRP A 187 GLU A 194 -1 O LEU A 191 N HIS A 180 SHEET 3 AA7 4 MET A 202 SER A 208 -1 O SER A 208 N TYR A 188 SHEET 4 AA7 4 LEU A 224 THR A 225 -1 O LEU A 224 N VAL A 203 SHEET 1 AA8 4 GLN A 234 GLN A 243 0 SHEET 2 AA8 4 TRP A 249 THR A 256 -1 O THR A 256 N GLN A 234 SHEET 3 AA8 4 GLU A 270 TRP A 278 -1 O CYS A 272 N PHE A 253 SHEET 4 AA8 4 PRO A 284 ILE A 286 -1 O ILE A 285 N LYS A 277 SHEET 1 AA9 4 ILE A 313 ASP A 315 0 SHEET 2 AA9 4 ALA A 500 PRO A 509 -1 O PHE A 505 N ASP A 315 SHEET 3 AA9 4 LEU A 346 MET A 348 -1 N LEU A 346 O PHE A 502 SHEET 4 AA9 4 TYR A 337 SER A 338 -1 N SER A 338 O LYS A 347 SHEET 1 AB1 6 ILE A 313 ASP A 315 0 SHEET 2 AB1 6 ALA A 500 PRO A 509 -1 O PHE A 505 N ASP A 315 SHEET 3 AB1 6 CYS A 373 PHE A 381 -1 N GLU A 380 O PHE A 501 SHEET 4 AB1 6 THR A 437 ALA A 444 -1 O ILE A 442 N VAL A 375 SHEET 5 AB1 6 GLU A 448 VAL A 454 -1 O SER A 452 N SER A 441 SHEET 6 AB1 6 THR A 461 LEU A 468 -1 O GLY A 465 N PHE A 451 SHEET 1 AB2 6 THR A 362 ARG A 367 0 SHEET 2 AB2 6 TYR A 484 THR A 490 -1 O PHE A 485 N ARG A 366 SHEET 3 AB2 6 GLU A 389 ASN A 397 -1 N TYR A 395 O TYR A 484 SHEET 4 AB2 6 HIS A 400 LYS A 409 -1 O TYR A 402 N VAL A 394 SHEET 5 AB2 6 ARG A 412 VAL A 421 -1 O LYS A 418 N GLU A 403 SHEET 6 AB2 6 ILE A 424 GLU A 432 -1 O LEU A 431 N VAL A 415 LINK O ASP A 316 CA CA A 601 1555 1555 2.37 LINK O SER A 344 CA CA A 601 1555 1555 2.33 LINK O ASP A 503 CA CA A 601 1555 1555 2.41 LINK OD1 ASP A 503 CA CA A 601 1555 1555 2.42 LINK CA CA A 601 O HOH A 736 1555 1555 2.27 LINK CA CA A 601 O HOH A 787 1555 1555 2.51 LINK CA CA A 601 O HOH A1061 1555 1555 2.44 CISPEP 1 ASN A 5 PRO A 6 0 -6.12 CISPEP 2 PHE A 34 PRO A 35 0 -3.34 CISPEP 3 GLY A 213 PRO A 214 0 5.62 CISPEP 4 ASN A 221 PRO A 222 0 -1.40 CISPEP 5 TYR A 261 PRO A 262 0 -12.05 CRYST1 59.816 59.816 277.870 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016718 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016718 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003599 0.00000