data_5Z5X # _entry.id 5Z5X # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5Z5X pdb_00005z5x 10.2210/pdb5z5x/pdb WWPDB D_1300006532 ? ? BMRB 21081 ? 10.13018/BMR21081 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-03-07 2 'Structure model' 1 1 2018-08-01 3 'Structure model' 1 2 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_nmr_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' 14 3 'Structure model' '_pdbx_nmr_software.name' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5Z5X _pdbx_database_status.recvd_initial_deposition_date 2018-01-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category CASD-NMR _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 21081 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Saravanan, R.' 1 ? 'Schmidtchen, A.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first 2762 _citation.page_last 2762 _citation.title 'Structural basis for endotoxin neutralisation and anti-inflammatory activity of thrombin-derived C-terminal peptides.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-018-05242-0 _citation.pdbx_database_id_PubMed 30018388 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Saravanan, R.' 1 ? primary 'Holdbrook, D.A.' 2 ? primary 'Petrlova, J.' 3 ? primary 'Singh, S.' 4 ? primary 'Berglund, N.A.' 5 ? primary 'Choong, Y.K.' 6 ? primary 'Kjellstrom, S.' 7 ? primary 'Bond, P.J.' 8 ? primary 'Malmsten, M.' 9 ? primary 'Schmidtchen, A.' 10 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Peptide from Prothrombin' _entity.formula_weight 2276.698 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.4.21.5 _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Coagulation factor II' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code HVFRLKKWIQKVIDQFGE _entity_poly.pdbx_seq_one_letter_code_can HVFRLKKWIQKVIDQFGE _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 VAL n 1 3 PHE n 1 4 ARG n 1 5 LEU n 1 6 LYS n 1 7 LYS n 1 8 TRP n 1 9 ILE n 1 10 GLN n 1 11 LYS n 1 12 VAL n 1 13 ILE n 1 14 ASP n 1 15 GLN n 1 16 PHE n 1 17 GLY n 1 18 GLU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 18 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 1 1 HIS HIS A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 TRP 8 8 8 TRP TRP A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLU 18 18 18 GLU GLU A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5Z5X _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5Z5X _struct.title 'HVF18 in complex with LPS micelles' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5Z5X _struct_keywords.text 'Thrombin C-terminal peptide, SYNTHETIC PEPTIDE, LPS binding peptide, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code THRB_HUMAN _struct_ref.pdbx_db_accession P00734 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code HVFRLKKWIQKVIDQFGE _struct_ref.pdbx_align_begin 605 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5Z5X _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 18 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00734 _struct_ref_seq.db_align_beg 605 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 622 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 2360 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id ILE _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 9 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLY _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 17 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ILE _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 9 _struct_conf.end_auth_comp_id GLY _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 17 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 3 ? ? -120.62 -59.94 2 1 ARG A 4 ? ? -133.55 -49.29 3 1 ILE A 9 ? ? -153.77 34.10 4 2 LYS A 6 ? ? -67.49 -179.24 5 2 LYS A 7 ? ? -98.61 52.47 6 2 ILE A 9 ? ? -144.90 32.02 7 2 PHE A 16 ? ? 51.45 87.11 8 3 LYS A 7 ? ? -149.48 -46.57 9 3 ILE A 9 ? ? -164.37 26.63 10 4 PHE A 3 ? ? 69.53 -75.14 11 4 LEU A 5 ? ? 66.76 134.25 12 4 ILE A 9 ? ? -154.78 35.05 13 5 VAL A 2 ? ? -90.96 52.29 14 5 PHE A 3 ? ? -131.21 -44.35 15 5 LYS A 6 ? ? -69.13 83.19 16 5 LYS A 7 ? ? -178.34 -54.36 17 5 ILE A 9 ? ? -166.18 26.80 18 5 PHE A 16 ? ? -106.13 67.83 19 6 VAL A 2 ? ? -147.45 -63.72 20 6 PHE A 3 ? ? -174.68 -38.40 21 6 LEU A 5 ? ? 65.04 152.49 22 6 LYS A 6 ? ? -49.55 150.57 23 6 TRP A 8 ? ? -150.03 15.70 24 7 ARG A 4 ? ? -151.22 39.22 25 7 LEU A 5 ? ? 65.83 146.72 26 7 LYS A 7 ? ? -153.39 -67.14 27 7 ILE A 9 ? ? -162.52 30.14 28 8 PHE A 3 ? ? -101.94 -62.78 29 8 LYS A 7 ? ? -163.81 -54.37 30 8 ILE A 9 ? ? -158.94 32.71 31 9 VAL A 2 ? ? -177.47 122.35 32 9 LEU A 5 ? ? 66.78 -78.81 33 9 LYS A 6 ? ? -145.54 13.92 34 9 PHE A 16 ? ? 51.25 85.78 35 10 VAL A 2 ? ? -177.48 122.42 36 10 PHE A 3 ? ? -172.06 32.79 37 10 ILE A 9 ? ? -155.87 35.35 # _pdbx_nmr_ensemble.entry_id 5Z5X _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5Z5X _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.5 mM HVF18, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 'HVF18 in LPS micelles' _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component HVF18 _pdbx_nmr_exptl_sample.concentration 0.5 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units mmHg _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 4.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label Condition1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH* _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 1 1 '2D 1H-1H TOCSY' 1 isotropic # _pdbx_nmr_refine.entry_id 5Z5X _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 processing TopSpin ? 'Bruker Biospin' 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 3 'peak picking' Sparky ? Goddard 4 'data analysis' MOLMOL ? 'Koradi, Billeter and Wuthrich' 5 refinement CYANA ? 'Guntert, Mumenthaler and Wuthrich' 7 'chemical shift assignment' Sparky ? Goddard # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 ASP N N N N 28 ASP CA C N S 29 ASP C C N N 30 ASP O O N N 31 ASP CB C N N 32 ASP CG C N N 33 ASP OD1 O N N 34 ASP OD2 O N N 35 ASP OXT O N N 36 ASP H H N N 37 ASP H2 H N N 38 ASP HA H N N 39 ASP HB2 H N N 40 ASP HB3 H N N 41 ASP HD2 H N N 42 ASP HXT H N N 43 GLN N N N N 44 GLN CA C N S 45 GLN C C N N 46 GLN O O N N 47 GLN CB C N N 48 GLN CG C N N 49 GLN CD C N N 50 GLN OE1 O N N 51 GLN NE2 N N N 52 GLN OXT O N N 53 GLN H H N N 54 GLN H2 H N N 55 GLN HA H N N 56 GLN HB2 H N N 57 GLN HB3 H N N 58 GLN HG2 H N N 59 GLN HG3 H N N 60 GLN HE21 H N N 61 GLN HE22 H N N 62 GLN HXT H N N 63 GLU N N N N 64 GLU CA C N S 65 GLU C C N N 66 GLU O O N N 67 GLU CB C N N 68 GLU CG C N N 69 GLU CD C N N 70 GLU OE1 O N N 71 GLU OE2 O N N 72 GLU OXT O N N 73 GLU H H N N 74 GLU H2 H N N 75 GLU HA H N N 76 GLU HB2 H N N 77 GLU HB3 H N N 78 GLU HG2 H N N 79 GLU HG3 H N N 80 GLU HE2 H N N 81 GLU HXT H N N 82 GLY N N N N 83 GLY CA C N N 84 GLY C C N N 85 GLY O O N N 86 GLY OXT O N N 87 GLY H H N N 88 GLY H2 H N N 89 GLY HA2 H N N 90 GLY HA3 H N N 91 GLY HXT H N N 92 HIS N N N N 93 HIS CA C N S 94 HIS C C N N 95 HIS O O N N 96 HIS CB C N N 97 HIS CG C Y N 98 HIS ND1 N Y N 99 HIS CD2 C Y N 100 HIS CE1 C Y N 101 HIS NE2 N Y N 102 HIS OXT O N N 103 HIS H H N N 104 HIS H2 H N N 105 HIS HA H N N 106 HIS HB2 H N N 107 HIS HB3 H N N 108 HIS HD1 H N N 109 HIS HD2 H N N 110 HIS HE1 H N N 111 HIS HE2 H N N 112 HIS HXT H N N 113 ILE N N N N 114 ILE CA C N S 115 ILE C C N N 116 ILE O O N N 117 ILE CB C N S 118 ILE CG1 C N N 119 ILE CG2 C N N 120 ILE CD1 C N N 121 ILE OXT O N N 122 ILE H H N N 123 ILE H2 H N N 124 ILE HA H N N 125 ILE HB H N N 126 ILE HG12 H N N 127 ILE HG13 H N N 128 ILE HG21 H N N 129 ILE HG22 H N N 130 ILE HG23 H N N 131 ILE HD11 H N N 132 ILE HD12 H N N 133 ILE HD13 H N N 134 ILE HXT H N N 135 LEU N N N N 136 LEU CA C N S 137 LEU C C N N 138 LEU O O N N 139 LEU CB C N N 140 LEU CG C N N 141 LEU CD1 C N N 142 LEU CD2 C N N 143 LEU OXT O N N 144 LEU H H N N 145 LEU H2 H N N 146 LEU HA H N N 147 LEU HB2 H N N 148 LEU HB3 H N N 149 LEU HG H N N 150 LEU HD11 H N N 151 LEU HD12 H N N 152 LEU HD13 H N N 153 LEU HD21 H N N 154 LEU HD22 H N N 155 LEU HD23 H N N 156 LEU HXT H N N 157 LYS N N N N 158 LYS CA C N S 159 LYS C C N N 160 LYS O O N N 161 LYS CB C N N 162 LYS CG C N N 163 LYS CD C N N 164 LYS CE C N N 165 LYS NZ N N N 166 LYS OXT O N N 167 LYS H H N N 168 LYS H2 H N N 169 LYS HA H N N 170 LYS HB2 H N N 171 LYS HB3 H N N 172 LYS HG2 H N N 173 LYS HG3 H N N 174 LYS HD2 H N N 175 LYS HD3 H N N 176 LYS HE2 H N N 177 LYS HE3 H N N 178 LYS HZ1 H N N 179 LYS HZ2 H N N 180 LYS HZ3 H N N 181 LYS HXT H N N 182 PHE N N N N 183 PHE CA C N S 184 PHE C C N N 185 PHE O O N N 186 PHE CB C N N 187 PHE CG C Y N 188 PHE CD1 C Y N 189 PHE CD2 C Y N 190 PHE CE1 C Y N 191 PHE CE2 C Y N 192 PHE CZ C Y N 193 PHE OXT O N N 194 PHE H H N N 195 PHE H2 H N N 196 PHE HA H N N 197 PHE HB2 H N N 198 PHE HB3 H N N 199 PHE HD1 H N N 200 PHE HD2 H N N 201 PHE HE1 H N N 202 PHE HE2 H N N 203 PHE HZ H N N 204 PHE HXT H N N 205 TRP N N N N 206 TRP CA C N S 207 TRP C C N N 208 TRP O O N N 209 TRP CB C N N 210 TRP CG C Y N 211 TRP CD1 C Y N 212 TRP CD2 C Y N 213 TRP NE1 N Y N 214 TRP CE2 C Y N 215 TRP CE3 C Y N 216 TRP CZ2 C Y N 217 TRP CZ3 C Y N 218 TRP CH2 C Y N 219 TRP OXT O N N 220 TRP H H N N 221 TRP H2 H N N 222 TRP HA H N N 223 TRP HB2 H N N 224 TRP HB3 H N N 225 TRP HD1 H N N 226 TRP HE1 H N N 227 TRP HE3 H N N 228 TRP HZ2 H N N 229 TRP HZ3 H N N 230 TRP HH2 H N N 231 TRP HXT H N N 232 VAL N N N N 233 VAL CA C N S 234 VAL C C N N 235 VAL O O N N 236 VAL CB C N N 237 VAL CG1 C N N 238 VAL CG2 C N N 239 VAL OXT O N N 240 VAL H H N N 241 VAL H2 H N N 242 VAL HA H N N 243 VAL HB H N N 244 VAL HG11 H N N 245 VAL HG12 H N N 246 VAL HG13 H N N 247 VAL HG21 H N N 248 VAL HG22 H N N 249 VAL HG23 H N N 250 VAL HXT H N N 251 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 ASP N CA sing N N 27 ASP N H sing N N 28 ASP N H2 sing N N 29 ASP CA C sing N N 30 ASP CA CB sing N N 31 ASP CA HA sing N N 32 ASP C O doub N N 33 ASP C OXT sing N N 34 ASP CB CG sing N N 35 ASP CB HB2 sing N N 36 ASP CB HB3 sing N N 37 ASP CG OD1 doub N N 38 ASP CG OD2 sing N N 39 ASP OD2 HD2 sing N N 40 ASP OXT HXT sing N N 41 GLN N CA sing N N 42 GLN N H sing N N 43 GLN N H2 sing N N 44 GLN CA C sing N N 45 GLN CA CB sing N N 46 GLN CA HA sing N N 47 GLN C O doub N N 48 GLN C OXT sing N N 49 GLN CB CG sing N N 50 GLN CB HB2 sing N N 51 GLN CB HB3 sing N N 52 GLN CG CD sing N N 53 GLN CG HG2 sing N N 54 GLN CG HG3 sing N N 55 GLN CD OE1 doub N N 56 GLN CD NE2 sing N N 57 GLN NE2 HE21 sing N N 58 GLN NE2 HE22 sing N N 59 GLN OXT HXT sing N N 60 GLU N CA sing N N 61 GLU N H sing N N 62 GLU N H2 sing N N 63 GLU CA C sing N N 64 GLU CA CB sing N N 65 GLU CA HA sing N N 66 GLU C O doub N N 67 GLU C OXT sing N N 68 GLU CB CG sing N N 69 GLU CB HB2 sing N N 70 GLU CB HB3 sing N N 71 GLU CG CD sing N N 72 GLU CG HG2 sing N N 73 GLU CG HG3 sing N N 74 GLU CD OE1 doub N N 75 GLU CD OE2 sing N N 76 GLU OE2 HE2 sing N N 77 GLU OXT HXT sing N N 78 GLY N CA sing N N 79 GLY N H sing N N 80 GLY N H2 sing N N 81 GLY CA C sing N N 82 GLY CA HA2 sing N N 83 GLY CA HA3 sing N N 84 GLY C O doub N N 85 GLY C OXT sing N N 86 GLY OXT HXT sing N N 87 HIS N CA sing N N 88 HIS N H sing N N 89 HIS N H2 sing N N 90 HIS CA C sing N N 91 HIS CA CB sing N N 92 HIS CA HA sing N N 93 HIS C O doub N N 94 HIS C OXT sing N N 95 HIS CB CG sing N N 96 HIS CB HB2 sing N N 97 HIS CB HB3 sing N N 98 HIS CG ND1 sing Y N 99 HIS CG CD2 doub Y N 100 HIS ND1 CE1 doub Y N 101 HIS ND1 HD1 sing N N 102 HIS CD2 NE2 sing Y N 103 HIS CD2 HD2 sing N N 104 HIS CE1 NE2 sing Y N 105 HIS CE1 HE1 sing N N 106 HIS NE2 HE2 sing N N 107 HIS OXT HXT sing N N 108 ILE N CA sing N N 109 ILE N H sing N N 110 ILE N H2 sing N N 111 ILE CA C sing N N 112 ILE CA CB sing N N 113 ILE CA HA sing N N 114 ILE C O doub N N 115 ILE C OXT sing N N 116 ILE CB CG1 sing N N 117 ILE CB CG2 sing N N 118 ILE CB HB sing N N 119 ILE CG1 CD1 sing N N 120 ILE CG1 HG12 sing N N 121 ILE CG1 HG13 sing N N 122 ILE CG2 HG21 sing N N 123 ILE CG2 HG22 sing N N 124 ILE CG2 HG23 sing N N 125 ILE CD1 HD11 sing N N 126 ILE CD1 HD12 sing N N 127 ILE CD1 HD13 sing N N 128 ILE OXT HXT sing N N 129 LEU N CA sing N N 130 LEU N H sing N N 131 LEU N H2 sing N N 132 LEU CA C sing N N 133 LEU CA CB sing N N 134 LEU CA HA sing N N 135 LEU C O doub N N 136 LEU C OXT sing N N 137 LEU CB CG sing N N 138 LEU CB HB2 sing N N 139 LEU CB HB3 sing N N 140 LEU CG CD1 sing N N 141 LEU CG CD2 sing N N 142 LEU CG HG sing N N 143 LEU CD1 HD11 sing N N 144 LEU CD1 HD12 sing N N 145 LEU CD1 HD13 sing N N 146 LEU CD2 HD21 sing N N 147 LEU CD2 HD22 sing N N 148 LEU CD2 HD23 sing N N 149 LEU OXT HXT sing N N 150 LYS N CA sing N N 151 LYS N H sing N N 152 LYS N H2 sing N N 153 LYS CA C sing N N 154 LYS CA CB sing N N 155 LYS CA HA sing N N 156 LYS C O doub N N 157 LYS C OXT sing N N 158 LYS CB CG sing N N 159 LYS CB HB2 sing N N 160 LYS CB HB3 sing N N 161 LYS CG CD sing N N 162 LYS CG HG2 sing N N 163 LYS CG HG3 sing N N 164 LYS CD CE sing N N 165 LYS CD HD2 sing N N 166 LYS CD HD3 sing N N 167 LYS CE NZ sing N N 168 LYS CE HE2 sing N N 169 LYS CE HE3 sing N N 170 LYS NZ HZ1 sing N N 171 LYS NZ HZ2 sing N N 172 LYS NZ HZ3 sing N N 173 LYS OXT HXT sing N N 174 PHE N CA sing N N 175 PHE N H sing N N 176 PHE N H2 sing N N 177 PHE CA C sing N N 178 PHE CA CB sing N N 179 PHE CA HA sing N N 180 PHE C O doub N N 181 PHE C OXT sing N N 182 PHE CB CG sing N N 183 PHE CB HB2 sing N N 184 PHE CB HB3 sing N N 185 PHE CG CD1 doub Y N 186 PHE CG CD2 sing Y N 187 PHE CD1 CE1 sing Y N 188 PHE CD1 HD1 sing N N 189 PHE CD2 CE2 doub Y N 190 PHE CD2 HD2 sing N N 191 PHE CE1 CZ doub Y N 192 PHE CE1 HE1 sing N N 193 PHE CE2 CZ sing Y N 194 PHE CE2 HE2 sing N N 195 PHE CZ HZ sing N N 196 PHE OXT HXT sing N N 197 TRP N CA sing N N 198 TRP N H sing N N 199 TRP N H2 sing N N 200 TRP CA C sing N N 201 TRP CA CB sing N N 202 TRP CA HA sing N N 203 TRP C O doub N N 204 TRP C OXT sing N N 205 TRP CB CG sing N N 206 TRP CB HB2 sing N N 207 TRP CB HB3 sing N N 208 TRP CG CD1 doub Y N 209 TRP CG CD2 sing Y N 210 TRP CD1 NE1 sing Y N 211 TRP CD1 HD1 sing N N 212 TRP CD2 CE2 doub Y N 213 TRP CD2 CE3 sing Y N 214 TRP NE1 CE2 sing Y N 215 TRP NE1 HE1 sing N N 216 TRP CE2 CZ2 sing Y N 217 TRP CE3 CZ3 doub Y N 218 TRP CE3 HE3 sing N N 219 TRP CZ2 CH2 doub Y N 220 TRP CZ2 HZ2 sing N N 221 TRP CZ3 CH2 sing Y N 222 TRP CZ3 HZ3 sing N N 223 TRP CH2 HH2 sing N N 224 TRP OXT HXT sing N N 225 VAL N CA sing N N 226 VAL N H sing N N 227 VAL N H2 sing N N 228 VAL CA C sing N N 229 VAL CA CB sing N N 230 VAL CA HA sing N N 231 VAL C O doub N N 232 VAL C OXT sing N N 233 VAL CB CG1 sing N N 234 VAL CB CG2 sing N N 235 VAL CB HB sing N N 236 VAL CG1 HG11 sing N N 237 VAL CG1 HG12 sing N N 238 VAL CG1 HG13 sing N N 239 VAL CG2 HG21 sing N N 240 VAL CG2 HG22 sing N N 241 VAL CG2 HG23 sing N N 242 VAL OXT HXT sing N N 243 # _pdbx_audit_support.funding_organization 'Singapore Ministry of Education Academic Research Fund Tier 1' _pdbx_audit_support.country Singapore _pdbx_audit_support.grant_number 2015-T1-001-082 _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DRX _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 5Z5X _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_