data_5Z98 # _entry.id 5Z98 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5Z98 pdb_00005z98 10.2210/pdb5z98/pdb WWPDB D_1300006318 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5Z98 _pdbx_database_status.recvd_initial_deposition_date 2018-02-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Matsuoka, T.' 1 ? 'Nagae, T.' 2 ? 'Ode, H.' 3 ? 'Watanabe, N.' 4 0000-0002-0118-5815 'Iwatani, Y.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 46 _citation.language ? _citation.page_first 10368 _citation.page_last 10379 _citation.title 'Structural basis of chimpanzee APOBEC3H dimerization stabilized by double-stranded RNA.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gky676 _citation.pdbx_database_id_PubMed 30060196 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Matsuoka, T.' 1 ? primary 'Nagae, T.' 2 ? primary 'Ode, H.' 3 ? primary 'Awazu, H.' 4 ? primary 'Kurosawa, T.' 5 ? primary 'Hamano, A.' 6 ? primary 'Matsuoka, K.' 7 ? primary 'Hachiya, A.' 8 ? primary 'Imahashi, M.' 9 ? primary 'Yokomaku, Y.' 10 ? primary 'Watanabe, N.' 11 ? primary 'Iwatani, Y.' 12 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 102.63 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5Z98 _cell.details ? _cell.formula_units_Z ? _cell.length_a 38.341 _cell.length_a_esd ? _cell.length_b 86.970 _cell.length_b_esd ? _cell.length_c 77.363 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Z98 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Apolipoprotein B mRNA editing enzyme catalytic polypeptide-like protein 3H' 21912.309 2 ? ? ? ? 2 polymer man ;RNA (5'-R(P*CP*UP*GP*CP*CP*GP*GP*GP*UP*A)-3') ; 3192.948 1 ? ? ? ? 3 polymer man ;RNA (5'-R(*AP*UP*AP*CP*CP*CP*GP*GP*CP*A)-3') ; 3159.965 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 5 water nat water 18.015 77 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DNA dC->dU-editing enzyme APOBEC-3H' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSMALLTAETFRLQFNNRRRLRRPYYPRKALLCYQLTPQNGSTPTRGYFENKKKCHAEICFINEIKSMGLDETQCYQVTC YLTWSPCSSCAWKLVDFIQAHDHLNLRIFASRLYYHWCKPQQEGLRLLCGSQVPVEVMGLPEFNDCWENFVDHEKPLSFD PCKMLEELDKNSRAIKRRLERIKQS ; ;GSMALLTAETFRLQFNNRRRLRRPYYPRKALLCYQLTPQNGSTPTRGYFENKKKCHAEICFINEIKSMGLDETQCYQVTC YLTWSPCSSCAWKLVDFIQAHDHLNLRIFASRLYYHWCKPQQEGLRLLCGSQVPVEVMGLPEFNDCWENFVDHEKPLSFD PCKMLEELDKNSRAIKRRLERIKQS ; A,B ? 2 polyribonucleotide no no CUGCCGGGUA CUGCCGGGUA C ? 3 polyribonucleotide no no AUACCCGGCA AUACCCGGCA D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 ALA n 1 5 LEU n 1 6 LEU n 1 7 THR n 1 8 ALA n 1 9 GLU n 1 10 THR n 1 11 PHE n 1 12 ARG n 1 13 LEU n 1 14 GLN n 1 15 PHE n 1 16 ASN n 1 17 ASN n 1 18 ARG n 1 19 ARG n 1 20 ARG n 1 21 LEU n 1 22 ARG n 1 23 ARG n 1 24 PRO n 1 25 TYR n 1 26 TYR n 1 27 PRO n 1 28 ARG n 1 29 LYS n 1 30 ALA n 1 31 LEU n 1 32 LEU n 1 33 CYS n 1 34 TYR n 1 35 GLN n 1 36 LEU n 1 37 THR n 1 38 PRO n 1 39 GLN n 1 40 ASN n 1 41 GLY n 1 42 SER n 1 43 THR n 1 44 PRO n 1 45 THR n 1 46 ARG n 1 47 GLY n 1 48 TYR n 1 49 PHE n 1 50 GLU n 1 51 ASN n 1 52 LYS n 1 53 LYS n 1 54 LYS n 1 55 CYS n 1 56 HIS n 1 57 ALA n 1 58 GLU n 1 59 ILE n 1 60 CYS n 1 61 PHE n 1 62 ILE n 1 63 ASN n 1 64 GLU n 1 65 ILE n 1 66 LYS n 1 67 SER n 1 68 MET n 1 69 GLY n 1 70 LEU n 1 71 ASP n 1 72 GLU n 1 73 THR n 1 74 GLN n 1 75 CYS n 1 76 TYR n 1 77 GLN n 1 78 VAL n 1 79 THR n 1 80 CYS n 1 81 TYR n 1 82 LEU n 1 83 THR n 1 84 TRP n 1 85 SER n 1 86 PRO n 1 87 CYS n 1 88 SER n 1 89 SER n 1 90 CYS n 1 91 ALA n 1 92 TRP n 1 93 LYS n 1 94 LEU n 1 95 VAL n 1 96 ASP n 1 97 PHE n 1 98 ILE n 1 99 GLN n 1 100 ALA n 1 101 HIS n 1 102 ASP n 1 103 HIS n 1 104 LEU n 1 105 ASN n 1 106 LEU n 1 107 ARG n 1 108 ILE n 1 109 PHE n 1 110 ALA n 1 111 SER n 1 112 ARG n 1 113 LEU n 1 114 TYR n 1 115 TYR n 1 116 HIS n 1 117 TRP n 1 118 CYS n 1 119 LYS n 1 120 PRO n 1 121 GLN n 1 122 GLN n 1 123 GLU n 1 124 GLY n 1 125 LEU n 1 126 ARG n 1 127 LEU n 1 128 LEU n 1 129 CYS n 1 130 GLY n 1 131 SER n 1 132 GLN n 1 133 VAL n 1 134 PRO n 1 135 VAL n 1 136 GLU n 1 137 VAL n 1 138 MET n 1 139 GLY n 1 140 LEU n 1 141 PRO n 1 142 GLU n 1 143 PHE n 1 144 ASN n 1 145 ASP n 1 146 CYS n 1 147 TRP n 1 148 GLU n 1 149 ASN n 1 150 PHE n 1 151 VAL n 1 152 ASP n 1 153 HIS n 1 154 GLU n 1 155 LYS n 1 156 PRO n 1 157 LEU n 1 158 SER n 1 159 PHE n 1 160 ASP n 1 161 PRO n 1 162 CYS n 1 163 LYS n 1 164 MET n 1 165 LEU n 1 166 GLU n 1 167 GLU n 1 168 LEU n 1 169 ASP n 1 170 LYS n 1 171 ASN n 1 172 SER n 1 173 ARG n 1 174 ALA n 1 175 ILE n 1 176 LYS n 1 177 ARG n 1 178 ARG n 1 179 LEU n 1 180 GLU n 1 181 ARG n 1 182 ILE n 1 183 LYS n 1 184 GLN n 1 185 SER n 2 1 C n 2 2 U n 2 3 G n 2 4 C n 2 5 C n 2 6 G n 2 7 G n 2 8 G n 2 9 U n 2 10 A n 3 1 A n 3 2 U n 3 3 A n 3 4 C n 3 5 C n 3 6 C n 3 7 G n 3 8 G n 3 9 C n 3 10 A n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 185 Chimpanzee ? APOBEC3H ? ? ? ? ? ? 'Pan troglodytes' 9598 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 10 ? ? ? ? ? ? ? ? ? unidentified 32644 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 10 ? ? ? ? ? ? ? ? ? unidentified 32644 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP B7T0U6_PANTR B7T0U6 ? 1 ;MALLTAETFRLQFNNRRRLRRPYYPRKALLCYQLTPQNGSTPTRGYFENKKKCHAEICFINEIKSMGLDETQCYQVTCYL TWSPCSSCAWKLVDFIQAHDHLNLRIFASRLYYHWCKPQQEGLRLLCGSQVPVEVMGLPEFNDCWENFVDHEKPLSFDPC KMLEELDKNSRAIKRRLERIKQS ; 1 2 PDB 5Z98 5Z98 ? 2 ? 1 3 PDB 5Z98 5Z98 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5Z98 A 3 ? 185 ? B7T0U6 1 ? 183 ? 1 183 2 1 5Z98 B 3 ? 185 ? B7T0U6 1 ? 183 ? 1 183 3 2 5Z98 C 1 ? 10 ? 5Z98 1 ? 10 ? 1 10 4 3 5Z98 D 1 ? 10 ? 5Z98 1 ? 10 ? 1 10 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5Z98 GLY A 1 ? UNP B7T0U6 ? ? 'expression tag' -1 1 1 5Z98 SER A 2 ? UNP B7T0U6 ? ? 'expression tag' 0 2 2 5Z98 GLY B 1 ? UNP B7T0U6 ? ? 'expression tag' -1 3 2 5Z98 SER B 2 ? UNP B7T0U6 ? ? 'expression tag' 0 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5Z98 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '10% PEG 3350, 100mM ammonium formate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-12-07 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5Z98 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.20 _reflns.d_resolution_low 43.49 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 24557 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.1 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.27 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2074 _reflns_shell.percent_possible_all 94.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.471 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 2.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.876 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5Z98 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.200 _refine.ls_d_res_low 43.485 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 24454 _refine.ls_number_reflns_R_free 1188 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.91 _refine.ls_percent_reflns_R_free 4.86 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2545 _refine.ls_R_factor_R_free 0.3202 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2511 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5w3v _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 42.36 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.34 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3028 _refine_hist.pdbx_number_atoms_nucleic_acid 370 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 3477 _refine_hist.d_res_high 2.200 _refine_hist.d_res_low 43.485 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 3516 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.010 ? 4830 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 9.735 ? 2097 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.047 ? 522 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 558 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.2000 2.3002 . . 136 2844 95.00 . . . 0.4281 . 0.3561 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3002 2.4214 . . 133 2879 96.00 . . . 0.3785 . 0.3519 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4214 2.5731 . . 165 2931 98.00 . . . 0.4058 . 0.3282 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5731 2.7718 . . 159 2941 98.00 . . . 0.3910 . 0.3000 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7718 3.0506 . . 158 2897 98.00 . . . 0.3472 . 0.2830 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0506 3.4919 . . 135 2937 97.00 . . . 0.3281 . 0.2543 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4919 4.3988 . . 134 2895 96.00 . . . 0.3274 . 0.2171 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.3988 43.4935 . . 168 2942 97.00 . . . 0.2486 . 0.2044 . . . . . . . . . . # _struct.entry_id 5Z98 _struct.title 'Crystal Structure of the Primate APOBEC3H Dimer mediated by RNA Duplex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5Z98 _struct_keywords.text ;APOBEC3, APOBEC3H, cytidine deaminase, deaminase, anti-HIV, Vif, dsRNA, cancer, HIV-1, SIV, chimpanzee, dimerization, Pan troglodytes, ANTIVIRAL PROTEIN-RNA complex ; _struct_keywords.pdbx_keywords 'ANTIVIRAL PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 7 ? PHE A 15 ? THR A 5 PHE A 13 1 ? 9 HELX_P HELX_P2 AA2 HIS A 56 ? ILE A 65 ? HIS A 54 ILE A 63 1 ? 10 HELX_P HELX_P3 AA3 CYS A 87 ? HIS A 101 ? CYS A 85 HIS A 99 1 ? 15 HELX_P HELX_P4 AA4 CYS A 118 ? GLY A 130 ? CYS A 116 GLY A 128 1 ? 13 HELX_P HELX_P5 AA5 GLY A 139 ? VAL A 151 ? GLY A 137 VAL A 149 1 ? 13 HELX_P HELX_P6 AA6 ASP A 160 ? SER A 185 ? ASP A 158 SER A 183 1 ? 26 HELX_P HELX_P7 AA7 THR B 7 ? PHE B 15 ? THR B 5 PHE B 13 1 ? 9 HELX_P HELX_P8 AA8 HIS B 56 ? GLY B 69 ? HIS B 54 GLY B 67 1 ? 14 HELX_P HELX_P9 AA9 CYS B 87 ? HIS B 101 ? CYS B 85 HIS B 99 1 ? 15 HELX_P HELX_P10 AB1 CYS B 118 ? SER B 131 ? CYS B 116 SER B 129 1 ? 14 HELX_P HELX_P11 AB2 GLY B 139 ? VAL B 151 ? GLY B 137 VAL B 149 1 ? 13 HELX_P HELX_P12 AB3 ASP B 160 ? GLN B 184 ? ASP B 158 GLN B 182 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 55 SG ? ? ? 1_555 A CYS 60 SG ? ? A CYS 53 A CYS 58 1_555 ? ? ? ? ? ? ? 2.053 ? ? disulf2 disulf ? ? B CYS 55 SG ? ? ? 1_555 B CYS 60 SG ? ? B CYS 53 B CYS 58 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc1 metalc ? ? A HIS 56 ND1 ? ? ? 1_555 E ZN . ZN ? ? A HIS 54 A ZN 300 1_555 ? ? ? ? ? ? ? 2.091 ? ? metalc2 metalc ? ? A CYS 87 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 85 A ZN 300 1_555 ? ? ? ? ? ? ? 2.041 ? ? metalc3 metalc ? ? A CYS 90 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 88 A ZN 300 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc4 metalc ? ? E ZN . ZN ? ? ? 1_555 G HOH . O ? ? A ZN 300 A HOH 409 1_555 ? ? ? ? ? ? ? 2.120 ? ? metalc5 metalc ? ? B HIS 56 ND1 ? ? ? 1_555 F ZN . ZN ? ? B HIS 54 B ZN 300 1_555 ? ? ? ? ? ? ? 2.304 ? ? metalc6 metalc ? ? B CYS 87 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 85 B ZN 300 1_555 ? ? ? ? ? ? ? 2.185 ? ? metalc7 metalc ? ? B CYS 90 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 88 B ZN 300 1_555 ? ? ? ? ? ? ? 2.474 ? ? hydrog1 hydrog ? ? C G 3 N1 ? ? ? 1_555 D C 9 N3 ? ? C G 3 D C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C G 3 N2 ? ? ? 1_555 D C 9 O2 ? ? C G 3 D C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C G 3 O6 ? ? ? 1_555 D C 9 N4 ? ? C G 3 D C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C C 4 N3 ? ? ? 1_555 D G 8 N1 ? ? C C 4 D G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C C 4 N4 ? ? ? 1_555 D G 8 O6 ? ? C C 4 D G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C C 4 O2 ? ? ? 1_555 D G 8 N2 ? ? C C 4 D G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C C 5 N3 ? ? ? 1_555 D G 7 N1 ? ? C C 5 D G 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C C 5 N4 ? ? ? 1_555 D G 7 O6 ? ? C C 5 D G 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C C 5 O2 ? ? ? 1_555 D G 7 N2 ? ? C C 5 D G 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C G 6 N1 ? ? ? 1_555 D C 6 N3 ? ? C G 6 D C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C G 6 N2 ? ? ? 1_555 D C 6 O2 ? ? C G 6 D C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C G 6 O6 ? ? ? 1_555 D C 6 N4 ? ? C G 6 D C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C G 7 N1 ? ? ? 1_555 D C 5 N3 ? ? C G 7 D C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C G 7 N2 ? ? ? 1_555 D C 5 O2 ? ? C G 7 D C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C G 7 O6 ? ? ? 1_555 D C 5 N4 ? ? C G 7 D C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C G 8 N1 ? ? ? 1_555 D C 4 N3 ? ? C G 8 D C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C G 8 N2 ? ? ? 1_555 D C 4 O2 ? ? C G 8 D C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C G 8 O6 ? ? ? 1_555 D C 4 N4 ? ? C G 8 D C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C U 9 N3 ? ? ? 1_555 D A 3 N1 ? ? C U 9 D A 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C U 9 O4 ? ? ? 1_555 D A 3 N6 ? ? C U 9 D A 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 23 A . ? ARG 21 A PRO 24 A ? PRO 22 A 1 -0.88 2 ARG 23 B . ? ARG 21 B PRO 24 B ? PRO 22 B 1 -3.37 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 45 ? GLU A 50 ? THR A 43 GLU A 48 AA1 2 LEU A 31 ? PRO A 38 ? LEU A 29 PRO A 36 AA1 3 TYR A 76 ? TRP A 84 ? TYR A 74 TRP A 82 AA1 4 LEU A 104 ? ARG A 112 ? LEU A 102 ARG A 110 AA1 5 VAL A 135 ? VAL A 137 ? VAL A 133 VAL A 135 AA2 1 THR B 45 ? GLU B 50 ? THR B 43 GLU B 48 AA2 2 LEU B 31 ? PRO B 38 ? LEU B 29 PRO B 36 AA2 3 TYR B 76 ? TRP B 84 ? TYR B 74 TRP B 82 AA2 4 LEU B 104 ? ARG B 112 ? LEU B 102 ARG B 110 AA2 5 VAL B 135 ? VAL B 137 ? VAL B 133 VAL B 135 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O THR A 45 ? O THR A 43 N LEU A 36 ? N LEU A 34 AA1 2 3 N CYS A 33 ? N CYS A 31 O TYR A 81 ? O TYR A 79 AA1 3 4 N LEU A 82 ? N LEU A 80 O SER A 111 ? O SER A 109 AA1 4 5 N ALA A 110 ? N ALA A 108 O GLU A 136 ? O GLU A 134 AA2 1 2 O PHE B 49 ? O PHE B 47 N LEU B 32 ? N LEU B 30 AA2 2 3 N THR B 37 ? N THR B 35 O GLN B 77 ? O GLN B 75 AA2 3 4 N LEU B 82 ? N LEU B 80 O PHE B 109 ? O PHE B 107 AA2 4 5 N ALA B 110 ? N ALA B 108 O GLU B 136 ? O GLU B 134 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 300 ? 4 'binding site for residue ZN A 300' AC2 Software B ZN 300 ? 3 'binding site for residue ZN B 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 56 ? HIS A 54 . ? 1_555 ? 2 AC1 4 CYS A 87 ? CYS A 85 . ? 1_555 ? 3 AC1 4 CYS A 90 ? CYS A 88 . ? 1_555 ? 4 AC1 4 HOH G . ? HOH A 409 . ? 1_555 ? 5 AC2 3 HIS B 56 ? HIS B 54 . ? 1_555 ? 6 AC2 3 CYS B 87 ? CYS B 85 . ? 1_555 ? 7 AC2 3 CYS B 90 ? CYS B 88 . ? 1_555 ? # _atom_sites.entry_id 5Z98 _atom_sites.fract_transf_matrix[1][1] 0.026082 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005845 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011498 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013247 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 SER 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 ALA 4 2 2 ALA ALA A . n A 1 5 LEU 5 3 3 LEU LEU A . n A 1 6 LEU 6 4 4 LEU LEU A . n A 1 7 THR 7 5 5 THR THR A . n A 1 8 ALA 8 6 6 ALA ALA A . n A 1 9 GLU 9 7 7 GLU GLU A . n A 1 10 THR 10 8 8 THR THR A . n A 1 11 PHE 11 9 9 PHE PHE A . n A 1 12 ARG 12 10 10 ARG ARG A . n A 1 13 LEU 13 11 11 LEU LEU A . n A 1 14 GLN 14 12 12 GLN GLN A . n A 1 15 PHE 15 13 13 PHE PHE A . n A 1 16 ASN 16 14 14 ASN ASN A . n A 1 17 ASN 17 15 15 ASN ASN A . n A 1 18 ARG 18 16 16 ARG ARG A . n A 1 19 ARG 19 17 17 ARG ARG A . n A 1 20 ARG 20 18 18 ARG ARG A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 ARG 22 20 20 ARG ARG A . n A 1 23 ARG 23 21 21 ARG ARG A . n A 1 24 PRO 24 22 22 PRO PRO A . n A 1 25 TYR 25 23 23 TYR TYR A . n A 1 26 TYR 26 24 24 TYR TYR A . n A 1 27 PRO 27 25 25 PRO PRO A . n A 1 28 ARG 28 26 26 ARG ARG A . n A 1 29 LYS 29 27 27 LYS LYS A . n A 1 30 ALA 30 28 28 ALA ALA A . n A 1 31 LEU 31 29 29 LEU LEU A . n A 1 32 LEU 32 30 30 LEU LEU A . n A 1 33 CYS 33 31 31 CYS CYS A . n A 1 34 TYR 34 32 32 TYR TYR A . n A 1 35 GLN 35 33 33 GLN GLN A . n A 1 36 LEU 36 34 34 LEU LEU A . n A 1 37 THR 37 35 35 THR THR A . n A 1 38 PRO 38 36 36 PRO PRO A . n A 1 39 GLN 39 37 37 GLN GLN A . n A 1 40 ASN 40 38 38 ASN ASN A . n A 1 41 GLY 41 39 39 GLY GLY A . n A 1 42 SER 42 40 40 SER SER A . n A 1 43 THR 43 41 41 THR THR A . n A 1 44 PRO 44 42 42 PRO PRO A . n A 1 45 THR 45 43 43 THR THR A . n A 1 46 ARG 46 44 44 ARG ARG A . n A 1 47 GLY 47 45 45 GLY GLY A . n A 1 48 TYR 48 46 46 TYR TYR A . n A 1 49 PHE 49 47 47 PHE PHE A . n A 1 50 GLU 50 48 48 GLU GLU A . n A 1 51 ASN 51 49 49 ASN ASN A . n A 1 52 LYS 52 50 50 LYS LYS A . n A 1 53 LYS 53 51 51 LYS LYS A . n A 1 54 LYS 54 52 52 LYS LYS A . n A 1 55 CYS 55 53 53 CYS CYS A . n A 1 56 HIS 56 54 54 HIS HIS A . n A 1 57 ALA 57 55 55 ALA ALA A . n A 1 58 GLU 58 56 56 GLU GLU A . n A 1 59 ILE 59 57 57 ILE ILE A . n A 1 60 CYS 60 58 58 CYS CYS A . n A 1 61 PHE 61 59 59 PHE PHE A . n A 1 62 ILE 62 60 60 ILE ILE A . n A 1 63 ASN 63 61 61 ASN ASN A . n A 1 64 GLU 64 62 62 GLU GLU A . n A 1 65 ILE 65 63 63 ILE ILE A . n A 1 66 LYS 66 64 64 LYS LYS A . n A 1 67 SER 67 65 65 SER SER A . n A 1 68 MET 68 66 66 MET MET A . n A 1 69 GLY 69 67 67 GLY GLY A . n A 1 70 LEU 70 68 68 LEU LEU A . n A 1 71 ASP 71 69 69 ASP ASP A . n A 1 72 GLU 72 70 70 GLU GLU A . n A 1 73 THR 73 71 71 THR THR A . n A 1 74 GLN 74 72 72 GLN GLN A . n A 1 75 CYS 75 73 73 CYS CYS A . n A 1 76 TYR 76 74 74 TYR TYR A . n A 1 77 GLN 77 75 75 GLN GLN A . n A 1 78 VAL 78 76 76 VAL VAL A . n A 1 79 THR 79 77 77 THR THR A . n A 1 80 CYS 80 78 78 CYS CYS A . n A 1 81 TYR 81 79 79 TYR TYR A . n A 1 82 LEU 82 80 80 LEU LEU A . n A 1 83 THR 83 81 81 THR THR A . n A 1 84 TRP 84 82 82 TRP TRP A . n A 1 85 SER 85 83 83 SER SER A . n A 1 86 PRO 86 84 84 PRO PRO A . n A 1 87 CYS 87 85 85 CYS CYS A . n A 1 88 SER 88 86 86 SER SER A . n A 1 89 SER 89 87 87 SER SER A . n A 1 90 CYS 90 88 88 CYS CYS A . n A 1 91 ALA 91 89 89 ALA ALA A . n A 1 92 TRP 92 90 90 TRP TRP A . n A 1 93 LYS 93 91 91 LYS LYS A . n A 1 94 LEU 94 92 92 LEU LEU A . n A 1 95 VAL 95 93 93 VAL VAL A . n A 1 96 ASP 96 94 94 ASP ASP A . n A 1 97 PHE 97 95 95 PHE PHE A . n A 1 98 ILE 98 96 96 ILE ILE A . n A 1 99 GLN 99 97 97 GLN GLN A . n A 1 100 ALA 100 98 98 ALA ALA A . n A 1 101 HIS 101 99 99 HIS HIS A . n A 1 102 ASP 102 100 100 ASP ASP A . n A 1 103 HIS 103 101 101 HIS HIS A . n A 1 104 LEU 104 102 102 LEU LEU A . n A 1 105 ASN 105 103 103 ASN ASN A . n A 1 106 LEU 106 104 104 LEU LEU A . n A 1 107 ARG 107 105 105 ARG ARG A . n A 1 108 ILE 108 106 106 ILE ILE A . n A 1 109 PHE 109 107 107 PHE PHE A . n A 1 110 ALA 110 108 108 ALA ALA A . n A 1 111 SER 111 109 109 SER SER A . n A 1 112 ARG 112 110 110 ARG ARG A . n A 1 113 LEU 113 111 111 LEU LEU A . n A 1 114 TYR 114 112 112 TYR TYR A . n A 1 115 TYR 115 113 113 TYR TYR A . n A 1 116 HIS 116 114 114 HIS HIS A . n A 1 117 TRP 117 115 115 TRP TRP A . n A 1 118 CYS 118 116 116 CYS CYS A . n A 1 119 LYS 119 117 117 LYS LYS A . n A 1 120 PRO 120 118 118 PRO PRO A . n A 1 121 GLN 121 119 119 GLN GLN A . n A 1 122 GLN 122 120 120 GLN GLN A . n A 1 123 GLU 123 121 121 GLU GLU A . n A 1 124 GLY 124 122 122 GLY GLY A . n A 1 125 LEU 125 123 123 LEU LEU A . n A 1 126 ARG 126 124 124 ARG ARG A . n A 1 127 LEU 127 125 125 LEU LEU A . n A 1 128 LEU 128 126 126 LEU LEU A . n A 1 129 CYS 129 127 127 CYS CYS A . n A 1 130 GLY 130 128 128 GLY GLY A . n A 1 131 SER 131 129 129 SER SER A . n A 1 132 GLN 132 130 130 GLN GLN A . n A 1 133 VAL 133 131 131 VAL VAL A . n A 1 134 PRO 134 132 132 PRO PRO A . n A 1 135 VAL 135 133 133 VAL VAL A . n A 1 136 GLU 136 134 134 GLU GLU A . n A 1 137 VAL 137 135 135 VAL VAL A . n A 1 138 MET 138 136 136 MET MET A . n A 1 139 GLY 139 137 137 GLY GLY A . n A 1 140 LEU 140 138 138 LEU LEU A . n A 1 141 PRO 141 139 139 PRO PRO A . n A 1 142 GLU 142 140 140 GLU GLU A . n A 1 143 PHE 143 141 141 PHE PHE A . n A 1 144 ASN 144 142 142 ASN ASN A . n A 1 145 ASP 145 143 143 ASP ASP A . n A 1 146 CYS 146 144 144 CYS CYS A . n A 1 147 TRP 147 145 145 TRP TRP A . n A 1 148 GLU 148 146 146 GLU GLU A . n A 1 149 ASN 149 147 147 ASN ASN A . n A 1 150 PHE 150 148 148 PHE PHE A . n A 1 151 VAL 151 149 149 VAL VAL A . n A 1 152 ASP 152 150 150 ASP ASP A . n A 1 153 HIS 153 151 151 HIS HIS A . n A 1 154 GLU 154 152 152 GLU GLU A . n A 1 155 LYS 155 153 153 LYS LYS A . n A 1 156 PRO 156 154 154 PRO PRO A . n A 1 157 LEU 157 155 155 LEU LEU A . n A 1 158 SER 158 156 156 SER SER A . n A 1 159 PHE 159 157 157 PHE PHE A . n A 1 160 ASP 160 158 158 ASP ASP A . n A 1 161 PRO 161 159 159 PRO PRO A . n A 1 162 CYS 162 160 160 CYS CYS A . n A 1 163 LYS 163 161 161 LYS LYS A . n A 1 164 MET 164 162 162 MET MET A . n A 1 165 LEU 165 163 163 LEU LEU A . n A 1 166 GLU 166 164 164 GLU GLU A . n A 1 167 GLU 167 165 165 GLU GLU A . n A 1 168 LEU 168 166 166 LEU LEU A . n A 1 169 ASP 169 167 167 ASP ASP A . n A 1 170 LYS 170 168 168 LYS LYS A . n A 1 171 ASN 171 169 169 ASN ASN A . n A 1 172 SER 172 170 170 SER SER A . n A 1 173 ARG 173 171 171 ARG ARG A . n A 1 174 ALA 174 172 172 ALA ALA A . n A 1 175 ILE 175 173 173 ILE ILE A . n A 1 176 LYS 176 174 174 LYS LYS A . n A 1 177 ARG 177 175 175 ARG ARG A . n A 1 178 ARG 178 176 176 ARG ARG A . n A 1 179 LEU 179 177 177 LEU LEU A . n A 1 180 GLU 180 178 178 GLU GLU A . n A 1 181 ARG 181 179 179 ARG ARG A . n A 1 182 ILE 182 180 180 ILE ILE A . n A 1 183 LYS 183 181 181 LYS LYS A . n A 1 184 GLN 184 182 182 GLN GLN A . n A 1 185 SER 185 183 183 SER SER A . n B 1 1 GLY 1 -1 ? ? ? B . n B 1 2 SER 2 0 ? ? ? B . n B 1 3 MET 3 1 ? ? ? B . n B 1 4 ALA 4 2 2 ALA ALA B . n B 1 5 LEU 5 3 3 LEU LEU B . n B 1 6 LEU 6 4 4 LEU LEU B . n B 1 7 THR 7 5 5 THR THR B . n B 1 8 ALA 8 6 6 ALA ALA B . n B 1 9 GLU 9 7 7 GLU GLU B . n B 1 10 THR 10 8 8 THR THR B . n B 1 11 PHE 11 9 9 PHE PHE B . n B 1 12 ARG 12 10 10 ARG ARG B . n B 1 13 LEU 13 11 11 LEU LEU B . n B 1 14 GLN 14 12 12 GLN GLN B . n B 1 15 PHE 15 13 13 PHE PHE B . n B 1 16 ASN 16 14 14 ASN ASN B . n B 1 17 ASN 17 15 15 ASN ASN B . n B 1 18 ARG 18 16 16 ARG ARG B . n B 1 19 ARG 19 17 17 ARG ARG B . n B 1 20 ARG 20 18 18 ARG ARG B . n B 1 21 LEU 21 19 19 LEU LEU B . n B 1 22 ARG 22 20 20 ARG ARG B . n B 1 23 ARG 23 21 21 ARG ARG B . n B 1 24 PRO 24 22 22 PRO PRO B . n B 1 25 TYR 25 23 23 TYR TYR B . n B 1 26 TYR 26 24 24 TYR TYR B . n B 1 27 PRO 27 25 25 PRO PRO B . n B 1 28 ARG 28 26 26 ARG ARG B . n B 1 29 LYS 29 27 27 LYS LYS B . n B 1 30 ALA 30 28 28 ALA ALA B . n B 1 31 LEU 31 29 29 LEU LEU B . n B 1 32 LEU 32 30 30 LEU LEU B . n B 1 33 CYS 33 31 31 CYS CYS B . n B 1 34 TYR 34 32 32 TYR TYR B . n B 1 35 GLN 35 33 33 GLN GLN B . n B 1 36 LEU 36 34 34 LEU LEU B . n B 1 37 THR 37 35 35 THR THR B . n B 1 38 PRO 38 36 36 PRO PRO B . n B 1 39 GLN 39 37 37 GLN GLN B . n B 1 40 ASN 40 38 38 ASN ASN B . n B 1 41 GLY 41 39 39 GLY GLY B . n B 1 42 SER 42 40 40 SER SER B . n B 1 43 THR 43 41 41 THR THR B . n B 1 44 PRO 44 42 42 PRO PRO B . n B 1 45 THR 45 43 43 THR THR B . n B 1 46 ARG 46 44 44 ARG ARG B . n B 1 47 GLY 47 45 45 GLY GLY B . n B 1 48 TYR 48 46 46 TYR TYR B . n B 1 49 PHE 49 47 47 PHE PHE B . n B 1 50 GLU 50 48 48 GLU GLU B . n B 1 51 ASN 51 49 49 ASN ASN B . n B 1 52 LYS 52 50 50 LYS LYS B . n B 1 53 LYS 53 51 51 LYS LYS B . n B 1 54 LYS 54 52 52 LYS LYS B . n B 1 55 CYS 55 53 53 CYS CYS B . n B 1 56 HIS 56 54 54 HIS HIS B . n B 1 57 ALA 57 55 55 ALA ALA B . n B 1 58 GLU 58 56 56 GLU GLU B . n B 1 59 ILE 59 57 57 ILE ILE B . n B 1 60 CYS 60 58 58 CYS CYS B . n B 1 61 PHE 61 59 59 PHE PHE B . n B 1 62 ILE 62 60 60 ILE ILE B . n B 1 63 ASN 63 61 61 ASN ASN B . n B 1 64 GLU 64 62 62 GLU GLU B . n B 1 65 ILE 65 63 63 ILE ILE B . n B 1 66 LYS 66 64 64 LYS LYS B . n B 1 67 SER 67 65 65 SER SER B . n B 1 68 MET 68 66 66 MET MET B . n B 1 69 GLY 69 67 67 GLY GLY B . n B 1 70 LEU 70 68 68 LEU LEU B . n B 1 71 ASP 71 69 69 ASP ASP B . n B 1 72 GLU 72 70 70 GLU GLU B . n B 1 73 THR 73 71 71 THR THR B . n B 1 74 GLN 74 72 72 GLN GLN B . n B 1 75 CYS 75 73 73 CYS CYS B . n B 1 76 TYR 76 74 74 TYR TYR B . n B 1 77 GLN 77 75 75 GLN GLN B . n B 1 78 VAL 78 76 76 VAL VAL B . n B 1 79 THR 79 77 77 THR THR B . n B 1 80 CYS 80 78 78 CYS CYS B . n B 1 81 TYR 81 79 79 TYR TYR B . n B 1 82 LEU 82 80 80 LEU LEU B . n B 1 83 THR 83 81 81 THR THR B . n B 1 84 TRP 84 82 82 TRP TRP B . n B 1 85 SER 85 83 83 SER SER B . n B 1 86 PRO 86 84 84 PRO PRO B . n B 1 87 CYS 87 85 85 CYS CYS B . n B 1 88 SER 88 86 86 SER SER B . n B 1 89 SER 89 87 87 SER SER B . n B 1 90 CYS 90 88 88 CYS CYS B . n B 1 91 ALA 91 89 89 ALA ALA B . n B 1 92 TRP 92 90 90 TRP TRP B . n B 1 93 LYS 93 91 91 LYS LYS B . n B 1 94 LEU 94 92 92 LEU LEU B . n B 1 95 VAL 95 93 93 VAL VAL B . n B 1 96 ASP 96 94 94 ASP ASP B . n B 1 97 PHE 97 95 95 PHE PHE B . n B 1 98 ILE 98 96 96 ILE ILE B . n B 1 99 GLN 99 97 97 GLN GLN B . n B 1 100 ALA 100 98 98 ALA ALA B . n B 1 101 HIS 101 99 99 HIS HIS B . n B 1 102 ASP 102 100 100 ASP ASP B . n B 1 103 HIS 103 101 101 HIS HIS B . n B 1 104 LEU 104 102 102 LEU LEU B . n B 1 105 ASN 105 103 103 ASN ASN B . n B 1 106 LEU 106 104 104 LEU LEU B . n B 1 107 ARG 107 105 105 ARG ARG B . n B 1 108 ILE 108 106 106 ILE ILE B . n B 1 109 PHE 109 107 107 PHE PHE B . n B 1 110 ALA 110 108 108 ALA ALA B . n B 1 111 SER 111 109 109 SER SER B . n B 1 112 ARG 112 110 110 ARG ARG B . n B 1 113 LEU 113 111 111 LEU LEU B . n B 1 114 TYR 114 112 112 TYR TYR B . n B 1 115 TYR 115 113 113 TYR TYR B . n B 1 116 HIS 116 114 114 HIS HIS B . n B 1 117 TRP 117 115 115 TRP TRP B . n B 1 118 CYS 118 116 116 CYS CYS B . n B 1 119 LYS 119 117 117 LYS LYS B . n B 1 120 PRO 120 118 118 PRO PRO B . n B 1 121 GLN 121 119 119 GLN GLN B . n B 1 122 GLN 122 120 120 GLN GLN B . n B 1 123 GLU 123 121 121 GLU GLU B . n B 1 124 GLY 124 122 122 GLY GLY B . n B 1 125 LEU 125 123 123 LEU LEU B . n B 1 126 ARG 126 124 124 ARG ARG B . n B 1 127 LEU 127 125 125 LEU LEU B . n B 1 128 LEU 128 126 126 LEU LEU B . n B 1 129 CYS 129 127 127 CYS CYS B . n B 1 130 GLY 130 128 128 GLY GLY B . n B 1 131 SER 131 129 129 SER SER B . n B 1 132 GLN 132 130 130 GLN GLN B . n B 1 133 VAL 133 131 131 VAL VAL B . n B 1 134 PRO 134 132 132 PRO PRO B . n B 1 135 VAL 135 133 133 VAL VAL B . n B 1 136 GLU 136 134 134 GLU GLU B . n B 1 137 VAL 137 135 135 VAL VAL B . n B 1 138 MET 138 136 136 MET MET B . n B 1 139 GLY 139 137 137 GLY GLY B . n B 1 140 LEU 140 138 138 LEU LEU B . n B 1 141 PRO 141 139 139 PRO PRO B . n B 1 142 GLU 142 140 140 GLU GLU B . n B 1 143 PHE 143 141 141 PHE PHE B . n B 1 144 ASN 144 142 142 ASN ASN B . n B 1 145 ASP 145 143 143 ASP ASP B . n B 1 146 CYS 146 144 144 CYS CYS B . n B 1 147 TRP 147 145 145 TRP TRP B . n B 1 148 GLU 148 146 146 GLU GLU B . n B 1 149 ASN 149 147 147 ASN ASN B . n B 1 150 PHE 150 148 148 PHE PHE B . n B 1 151 VAL 151 149 149 VAL VAL B . n B 1 152 ASP 152 150 150 ASP ASP B . n B 1 153 HIS 153 151 151 HIS HIS B . n B 1 154 GLU 154 152 152 GLU GLU B . n B 1 155 LYS 155 153 153 LYS LYS B . n B 1 156 PRO 156 154 154 PRO PRO B . n B 1 157 LEU 157 155 155 LEU LEU B . n B 1 158 SER 158 156 156 SER SER B . n B 1 159 PHE 159 157 157 PHE PHE B . n B 1 160 ASP 160 158 158 ASP ASP B . n B 1 161 PRO 161 159 159 PRO PRO B . n B 1 162 CYS 162 160 160 CYS CYS B . n B 1 163 LYS 163 161 161 LYS LYS B . n B 1 164 MET 164 162 162 MET MET B . n B 1 165 LEU 165 163 163 LEU LEU B . n B 1 166 GLU 166 164 164 GLU GLU B . n B 1 167 GLU 167 165 165 GLU GLU B . n B 1 168 LEU 168 166 166 LEU LEU B . n B 1 169 ASP 169 167 167 ASP ASP B . n B 1 170 LYS 170 168 168 LYS LYS B . n B 1 171 ASN 171 169 169 ASN ASN B . n B 1 172 SER 172 170 170 SER SER B . n B 1 173 ARG 173 171 171 ARG ARG B . n B 1 174 ALA 174 172 172 ALA ALA B . n B 1 175 ILE 175 173 173 ILE ILE B . n B 1 176 LYS 176 174 174 LYS LYS B . n B 1 177 ARG 177 175 175 ARG ARG B . n B 1 178 ARG 178 176 176 ARG ARG B . n B 1 179 LEU 179 177 177 LEU LEU B . n B 1 180 GLU 180 178 178 GLU GLU B . n B 1 181 ARG 181 179 179 ARG ARG B . n B 1 182 ILE 182 180 180 ILE ILE B . n B 1 183 LYS 183 181 181 LYS LYS B . n B 1 184 GLN 184 182 182 GLN GLN B . n B 1 185 SER 185 183 183 SER SER B . n C 2 1 C 1 1 1 C C C . n C 2 2 U 2 2 2 U U C . n C 2 3 G 3 3 3 G G C . n C 2 4 C 4 4 4 C C C . n C 2 5 C 5 5 5 C C C . n C 2 6 G 6 6 6 G G C . n C 2 7 G 7 7 7 G G C . n C 2 8 G 8 8 8 G G C . n C 2 9 U 9 9 9 U U C . n C 2 10 A 10 10 10 A A C . n D 3 1 A 1 1 1 A A D . n D 3 2 U 2 2 2 U U D . n D 3 3 A 3 3 3 A A D . n D 3 4 C 4 4 4 C C D . n D 3 5 C 5 5 5 C C D . n D 3 6 C 6 6 6 C C D . n D 3 7 G 7 7 7 G G D . n D 3 8 G 8 8 8 G G D . n D 3 9 C 9 9 9 C C D . n D 3 10 A 10 10 10 A A D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ZN 1 300 300 ZN ZN A . F 4 ZN 1 300 300 ZN ZN B . G 5 HOH 1 401 43 HOH HOH A . G 5 HOH 2 402 52 HOH HOH A . G 5 HOH 3 403 31 HOH HOH A . G 5 HOH 4 404 49 HOH HOH A . G 5 HOH 5 405 6 HOH HOH A . G 5 HOH 6 406 17 HOH HOH A . G 5 HOH 7 407 28 HOH HOH A . G 5 HOH 8 408 18 HOH HOH A . G 5 HOH 9 409 77 HOH HOH A . G 5 HOH 10 410 42 HOH HOH A . G 5 HOH 11 411 71 HOH HOH A . G 5 HOH 12 412 25 HOH HOH A . G 5 HOH 13 413 46 HOH HOH A . G 5 HOH 14 414 64 HOH HOH A . G 5 HOH 15 415 55 HOH HOH A . G 5 HOH 16 416 70 HOH HOH A . G 5 HOH 17 417 15 HOH HOH A . G 5 HOH 18 418 4 HOH HOH A . G 5 HOH 19 419 35 HOH HOH A . G 5 HOH 20 420 2 HOH HOH A . G 5 HOH 21 421 48 HOH HOH A . G 5 HOH 22 422 7 HOH HOH A . G 5 HOH 23 423 45 HOH HOH A . G 5 HOH 24 424 37 HOH HOH A . G 5 HOH 25 425 74 HOH HOH A . G 5 HOH 26 426 5 HOH HOH A . G 5 HOH 27 427 9 HOH HOH A . G 5 HOH 28 428 54 HOH HOH A . G 5 HOH 29 429 76 HOH HOH A . G 5 HOH 30 430 60 HOH HOH A . G 5 HOH 31 431 33 HOH HOH A . G 5 HOH 32 432 38 HOH HOH A . G 5 HOH 33 433 26 HOH HOH A . G 5 HOH 34 434 34 HOH HOH A . G 5 HOH 35 435 1 HOH HOH A . G 5 HOH 36 436 67 HOH HOH A . G 5 HOH 37 437 65 HOH HOH A . G 5 HOH 38 438 50 HOH HOH A . G 5 HOH 39 439 56 HOH HOH A . G 5 HOH 40 440 27 HOH HOH A . G 5 HOH 41 441 32 HOH HOH A . G 5 HOH 42 442 40 HOH HOH A . H 5 HOH 1 401 57 HOH HOH B . H 5 HOH 2 402 24 HOH HOH B . H 5 HOH 3 403 14 HOH HOH B . H 5 HOH 4 404 12 HOH HOH B . H 5 HOH 5 405 23 HOH HOH B . H 5 HOH 6 406 44 HOH HOH B . H 5 HOH 7 407 10 HOH HOH B . H 5 HOH 8 408 30 HOH HOH B . H 5 HOH 9 409 22 HOH HOH B . H 5 HOH 10 410 69 HOH HOH B . H 5 HOH 11 411 16 HOH HOH B . H 5 HOH 12 412 20 HOH HOH B . H 5 HOH 13 413 11 HOH HOH B . H 5 HOH 14 414 41 HOH HOH B . H 5 HOH 15 415 47 HOH HOH B . H 5 HOH 16 416 61 HOH HOH B . H 5 HOH 17 417 75 HOH HOH B . H 5 HOH 18 418 51 HOH HOH B . H 5 HOH 19 419 29 HOH HOH B . H 5 HOH 20 420 73 HOH HOH B . I 5 HOH 1 101 68 HOH HOH C . I 5 HOH 2 102 39 HOH HOH C . I 5 HOH 3 103 36 HOH HOH C . I 5 HOH 4 104 8 HOH HOH C . I 5 HOH 5 105 3 HOH HOH C . I 5 HOH 6 106 59 HOH HOH C . J 5 HOH 1 101 72 HOH HOH D . J 5 HOH 2 102 62 HOH HOH D . J 5 HOH 3 103 66 HOH HOH D . J 5 HOH 4 104 58 HOH HOH D . J 5 HOH 5 105 21 HOH HOH D . J 5 HOH 6 106 53 HOH HOH D . J 5 HOH 7 107 13 HOH HOH D . J 5 HOH 8 108 63 HOH HOH D . J 5 HOH 9 109 19 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 B,C,D,F,H,I,J 1 2 A,E,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4520 ? 1 MORE -111 ? 1 'SSA (A^2)' 21020 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_556 x,y,z+1 1.0000000000 0.0000000000 0.0000000000 -16.9157448972 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 75.4910017391 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 56 ? A HIS 54 ? 1_555 ZN ? E ZN . ? A ZN 300 ? 1_555 SG ? A CYS 87 ? A CYS 85 ? 1_555 95.9 ? 2 ND1 ? A HIS 56 ? A HIS 54 ? 1_555 ZN ? E ZN . ? A ZN 300 ? 1_555 SG ? A CYS 90 ? A CYS 88 ? 1_555 108.9 ? 3 SG ? A CYS 87 ? A CYS 85 ? 1_555 ZN ? E ZN . ? A ZN 300 ? 1_555 SG ? A CYS 90 ? A CYS 88 ? 1_555 127.5 ? 4 ND1 ? A HIS 56 ? A HIS 54 ? 1_555 ZN ? E ZN . ? A ZN 300 ? 1_555 O ? G HOH . ? A HOH 409 ? 1_555 107.7 ? 5 SG ? A CYS 87 ? A CYS 85 ? 1_555 ZN ? E ZN . ? A ZN 300 ? 1_555 O ? G HOH . ? A HOH 409 ? 1_555 109.9 ? 6 SG ? A CYS 90 ? A CYS 88 ? 1_555 ZN ? E ZN . ? A ZN 300 ? 1_555 O ? G HOH . ? A HOH 409 ? 1_555 105.4 ? 7 ND1 ? B HIS 56 ? B HIS 54 ? 1_555 ZN ? F ZN . ? B ZN 300 ? 1_555 SG ? B CYS 87 ? B CYS 85 ? 1_555 107.2 ? 8 ND1 ? B HIS 56 ? B HIS 54 ? 1_555 ZN ? F ZN . ? B ZN 300 ? 1_555 SG ? B CYS 90 ? B CYS 88 ? 1_555 99.0 ? 9 SG ? B CYS 87 ? B CYS 85 ? 1_555 ZN ? F ZN . ? B ZN 300 ? 1_555 SG ? B CYS 90 ? B CYS 88 ? 1_555 129.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-08-15 2 'Structure model' 1 1 2018-11-14 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_database_2.pdbx_DOI' 5 3 'Structure model' '_database_2.pdbx_database_accession' 6 3 'Structure model' '_struct_conn.pdbx_dist_value' 7 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 8 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.12_2829: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 431 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 434 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 38 ? ? -61.67 -73.00 2 1 GLU A 62 ? ? -61.72 4.92 3 1 SER A 65 ? ? -91.09 52.39 4 1 CYS A 85 ? ? -29.29 153.20 5 1 LYS B 50 ? ? -134.08 -144.87 6 1 LYS B 51 ? ? -20.78 -103.64 7 1 LYS B 52 ? ? -114.39 51.56 8 1 CYS B 53 ? ? -119.89 -94.18 9 1 HIS B 54 ? ? 93.49 139.85 10 1 CYS B 85 ? ? -32.62 166.82 11 1 HIS B 101 ? ? -67.70 7.70 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 155 ? CD2 ? A LEU 157 CD2 2 1 Y 1 B ASP 100 ? OD2 ? B ASP 102 OD2 3 1 Y 1 C A 10 ? "C5'" ? C A 10 "C5'" 4 1 Y 1 C A 10 ? "C4'" ? C A 10 "C4'" 5 1 Y 1 C A 10 ? "O4'" ? C A 10 "O4'" 6 1 Y 1 C A 10 ? "C3'" ? C A 10 "C3'" 7 1 Y 1 C A 10 ? "C2'" ? C A 10 "C2'" 8 1 Y 1 C A 10 ? "O2'" ? C A 10 "O2'" 9 1 Y 1 C A 10 ? "C1'" ? C A 10 "C1'" 10 1 Y 1 C A 10 ? N9 ? C A 10 N9 11 1 Y 1 C A 10 ? C8 ? C A 10 C8 12 1 Y 1 C A 10 ? N7 ? C A 10 N7 13 1 Y 1 C A 10 ? C5 ? C A 10 C5 14 1 Y 1 C A 10 ? C6 ? C A 10 C6 15 1 Y 1 C A 10 ? N6 ? C A 10 N6 16 1 Y 1 C A 10 ? N1 ? C A 10 N1 17 1 Y 1 C A 10 ? C2 ? C A 10 C2 18 1 Y 1 C A 10 ? N3 ? C A 10 N3 19 1 Y 1 C A 10 ? C4 ? C A 10 C4 20 1 Y 1 D A 1 ? "O5'" ? D A 1 "O5'" 21 1 Y 1 D A 1 ? "C5'" ? D A 1 "C5'" 22 1 Y 1 D A 1 ? "C4'" ? D A 1 "C4'" 23 1 Y 1 D A 1 ? "O4'" ? D A 1 "O4'" 24 1 Y 1 D A 1 ? "C3'" ? D A 1 "C3'" 25 1 Y 1 D A 1 ? "C2'" ? D A 1 "C2'" 26 1 Y 1 D A 1 ? "O2'" ? D A 1 "O2'" 27 1 Y 1 D A 1 ? "C1'" ? D A 1 "C1'" 28 1 Y 1 D A 1 ? N9 ? D A 1 N9 29 1 Y 1 D A 1 ? C8 ? D A 1 C8 30 1 Y 1 D A 1 ? N7 ? D A 1 N7 31 1 Y 1 D A 1 ? C5 ? D A 1 C5 32 1 Y 1 D A 1 ? C6 ? D A 1 C6 33 1 Y 1 D A 1 ? N6 ? D A 1 N6 34 1 Y 1 D A 1 ? N1 ? D A 1 N1 35 1 Y 1 D A 1 ? C2 ? D A 1 C2 36 1 Y 1 D A 1 ? N3 ? D A 1 N3 37 1 Y 1 D A 1 ? C4 ? D A 1 C4 38 1 Y 1 D A 10 ? "C5'" ? D A 10 "C5'" 39 1 Y 1 D A 10 ? "C4'" ? D A 10 "C4'" 40 1 Y 1 D A 10 ? "O4'" ? D A 10 "O4'" 41 1 Y 1 D A 10 ? "C3'" ? D A 10 "C3'" 42 1 Y 1 D A 10 ? "O3'" ? D A 10 "O3'" 43 1 Y 1 D A 10 ? "C2'" ? D A 10 "C2'" 44 1 Y 1 D A 10 ? "O2'" ? D A 10 "O2'" 45 1 Y 1 D A 10 ? "C1'" ? D A 10 "C1'" 46 1 Y 1 D A 10 ? N9 ? D A 10 N9 47 1 Y 1 D A 10 ? C8 ? D A 10 C8 48 1 Y 1 D A 10 ? N7 ? D A 10 N7 49 1 Y 1 D A 10 ? C5 ? D A 10 C5 50 1 Y 1 D A 10 ? C6 ? D A 10 C6 51 1 Y 1 D A 10 ? N6 ? D A 10 N6 52 1 Y 1 D A 10 ? N1 ? D A 10 N1 53 1 Y 1 D A 10 ? C2 ? D A 10 C2 54 1 Y 1 D A 10 ? N3 ? D A 10 N3 55 1 Y 1 D A 10 ? C4 ? D A 10 C4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A SER 0 ? A SER 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 B GLY -1 ? B GLY 1 5 1 Y 1 B SER 0 ? B SER 2 6 1 Y 1 B MET 1 ? B MET 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 HOH O O N N 268 HOH H1 H N N 269 HOH H2 H N N 270 ILE N N N N 271 ILE CA C N S 272 ILE C C N N 273 ILE O O N N 274 ILE CB C N S 275 ILE CG1 C N N 276 ILE CG2 C N N 277 ILE CD1 C N N 278 ILE OXT O N N 279 ILE H H N N 280 ILE H2 H N N 281 ILE HA H N N 282 ILE HB H N N 283 ILE HG12 H N N 284 ILE HG13 H N N 285 ILE HG21 H N N 286 ILE HG22 H N N 287 ILE HG23 H N N 288 ILE HD11 H N N 289 ILE HD12 H N N 290 ILE HD13 H N N 291 ILE HXT H N N 292 LEU N N N N 293 LEU CA C N S 294 LEU C C N N 295 LEU O O N N 296 LEU CB C N N 297 LEU CG C N N 298 LEU CD1 C N N 299 LEU CD2 C N N 300 LEU OXT O N N 301 LEU H H N N 302 LEU H2 H N N 303 LEU HA H N N 304 LEU HB2 H N N 305 LEU HB3 H N N 306 LEU HG H N N 307 LEU HD11 H N N 308 LEU HD12 H N N 309 LEU HD13 H N N 310 LEU HD21 H N N 311 LEU HD22 H N N 312 LEU HD23 H N N 313 LEU HXT H N N 314 LYS N N N N 315 LYS CA C N S 316 LYS C C N N 317 LYS O O N N 318 LYS CB C N N 319 LYS CG C N N 320 LYS CD C N N 321 LYS CE C N N 322 LYS NZ N N N 323 LYS OXT O N N 324 LYS H H N N 325 LYS H2 H N N 326 LYS HA H N N 327 LYS HB2 H N N 328 LYS HB3 H N N 329 LYS HG2 H N N 330 LYS HG3 H N N 331 LYS HD2 H N N 332 LYS HD3 H N N 333 LYS HE2 H N N 334 LYS HE3 H N N 335 LYS HZ1 H N N 336 LYS HZ2 H N N 337 LYS HZ3 H N N 338 LYS HXT H N N 339 MET N N N N 340 MET CA C N S 341 MET C C N N 342 MET O O N N 343 MET CB C N N 344 MET CG C N N 345 MET SD S N N 346 MET CE C N N 347 MET OXT O N N 348 MET H H N N 349 MET H2 H N N 350 MET HA H N N 351 MET HB2 H N N 352 MET HB3 H N N 353 MET HG2 H N N 354 MET HG3 H N N 355 MET HE1 H N N 356 MET HE2 H N N 357 MET HE3 H N N 358 MET HXT H N N 359 PHE N N N N 360 PHE CA C N S 361 PHE C C N N 362 PHE O O N N 363 PHE CB C N N 364 PHE CG C Y N 365 PHE CD1 C Y N 366 PHE CD2 C Y N 367 PHE CE1 C Y N 368 PHE CE2 C Y N 369 PHE CZ C Y N 370 PHE OXT O N N 371 PHE H H N N 372 PHE H2 H N N 373 PHE HA H N N 374 PHE HB2 H N N 375 PHE HB3 H N N 376 PHE HD1 H N N 377 PHE HD2 H N N 378 PHE HE1 H N N 379 PHE HE2 H N N 380 PHE HZ H N N 381 PHE HXT H N N 382 PRO N N N N 383 PRO CA C N S 384 PRO C C N N 385 PRO O O N N 386 PRO CB C N N 387 PRO CG C N N 388 PRO CD C N N 389 PRO OXT O N N 390 PRO H H N N 391 PRO HA H N N 392 PRO HB2 H N N 393 PRO HB3 H N N 394 PRO HG2 H N N 395 PRO HG3 H N N 396 PRO HD2 H N N 397 PRO HD3 H N N 398 PRO HXT H N N 399 SER N N N N 400 SER CA C N S 401 SER C C N N 402 SER O O N N 403 SER CB C N N 404 SER OG O N N 405 SER OXT O N N 406 SER H H N N 407 SER H2 H N N 408 SER HA H N N 409 SER HB2 H N N 410 SER HB3 H N N 411 SER HG H N N 412 SER HXT H N N 413 THR N N N N 414 THR CA C N S 415 THR C C N N 416 THR O O N N 417 THR CB C N R 418 THR OG1 O N N 419 THR CG2 C N N 420 THR OXT O N N 421 THR H H N N 422 THR H2 H N N 423 THR HA H N N 424 THR HB H N N 425 THR HG1 H N N 426 THR HG21 H N N 427 THR HG22 H N N 428 THR HG23 H N N 429 THR HXT H N N 430 TRP N N N N 431 TRP CA C N S 432 TRP C C N N 433 TRP O O N N 434 TRP CB C N N 435 TRP CG C Y N 436 TRP CD1 C Y N 437 TRP CD2 C Y N 438 TRP NE1 N Y N 439 TRP CE2 C Y N 440 TRP CE3 C Y N 441 TRP CZ2 C Y N 442 TRP CZ3 C Y N 443 TRP CH2 C Y N 444 TRP OXT O N N 445 TRP H H N N 446 TRP H2 H N N 447 TRP HA H N N 448 TRP HB2 H N N 449 TRP HB3 H N N 450 TRP HD1 H N N 451 TRP HE1 H N N 452 TRP HE3 H N N 453 TRP HZ2 H N N 454 TRP HZ3 H N N 455 TRP HH2 H N N 456 TRP HXT H N N 457 TYR N N N N 458 TYR CA C N S 459 TYR C C N N 460 TYR O O N N 461 TYR CB C N N 462 TYR CG C Y N 463 TYR CD1 C Y N 464 TYR CD2 C Y N 465 TYR CE1 C Y N 466 TYR CE2 C Y N 467 TYR CZ C Y N 468 TYR OH O N N 469 TYR OXT O N N 470 TYR H H N N 471 TYR H2 H N N 472 TYR HA H N N 473 TYR HB2 H N N 474 TYR HB3 H N N 475 TYR HD1 H N N 476 TYR HD2 H N N 477 TYR HE1 H N N 478 TYR HE2 H N N 479 TYR HH H N N 480 TYR HXT H N N 481 U OP3 O N N 482 U P P N N 483 U OP1 O N N 484 U OP2 O N N 485 U "O5'" O N N 486 U "C5'" C N N 487 U "C4'" C N R 488 U "O4'" O N N 489 U "C3'" C N S 490 U "O3'" O N N 491 U "C2'" C N R 492 U "O2'" O N N 493 U "C1'" C N R 494 U N1 N N N 495 U C2 C N N 496 U O2 O N N 497 U N3 N N N 498 U C4 C N N 499 U O4 O N N 500 U C5 C N N 501 U C6 C N N 502 U HOP3 H N N 503 U HOP2 H N N 504 U "H5'" H N N 505 U "H5''" H N N 506 U "H4'" H N N 507 U "H3'" H N N 508 U "HO3'" H N N 509 U "H2'" H N N 510 U "HO2'" H N N 511 U "H1'" H N N 512 U H3 H N N 513 U H5 H N N 514 U H6 H N N 515 VAL N N N N 516 VAL CA C N S 517 VAL C C N N 518 VAL O O N N 519 VAL CB C N N 520 VAL CG1 C N N 521 VAL CG2 C N N 522 VAL OXT O N N 523 VAL H H N N 524 VAL H2 H N N 525 VAL HA H N N 526 VAL HB H N N 527 VAL HG11 H N N 528 VAL HG12 H N N 529 VAL HG13 H N N 530 VAL HG21 H N N 531 VAL HG22 H N N 532 VAL HG23 H N N 533 VAL HXT H N N 534 ZN ZN ZN N N 535 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 MET N CA sing N N 333 MET N H sing N N 334 MET N H2 sing N N 335 MET CA C sing N N 336 MET CA CB sing N N 337 MET CA HA sing N N 338 MET C O doub N N 339 MET C OXT sing N N 340 MET CB CG sing N N 341 MET CB HB2 sing N N 342 MET CB HB3 sing N N 343 MET CG SD sing N N 344 MET CG HG2 sing N N 345 MET CG HG3 sing N N 346 MET SD CE sing N N 347 MET CE HE1 sing N N 348 MET CE HE2 sing N N 349 MET CE HE3 sing N N 350 MET OXT HXT sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 PRO N CA sing N N 375 PRO N CD sing N N 376 PRO N H sing N N 377 PRO CA C sing N N 378 PRO CA CB sing N N 379 PRO CA HA sing N N 380 PRO C O doub N N 381 PRO C OXT sing N N 382 PRO CB CG sing N N 383 PRO CB HB2 sing N N 384 PRO CB HB3 sing N N 385 PRO CG CD sing N N 386 PRO CG HG2 sing N N 387 PRO CG HG3 sing N N 388 PRO CD HD2 sing N N 389 PRO CD HD3 sing N N 390 PRO OXT HXT sing N N 391 SER N CA sing N N 392 SER N H sing N N 393 SER N H2 sing N N 394 SER CA C sing N N 395 SER CA CB sing N N 396 SER CA HA sing N N 397 SER C O doub N N 398 SER C OXT sing N N 399 SER CB OG sing N N 400 SER CB HB2 sing N N 401 SER CB HB3 sing N N 402 SER OG HG sing N N 403 SER OXT HXT sing N N 404 THR N CA sing N N 405 THR N H sing N N 406 THR N H2 sing N N 407 THR CA C sing N N 408 THR CA CB sing N N 409 THR CA HA sing N N 410 THR C O doub N N 411 THR C OXT sing N N 412 THR CB OG1 sing N N 413 THR CB CG2 sing N N 414 THR CB HB sing N N 415 THR OG1 HG1 sing N N 416 THR CG2 HG21 sing N N 417 THR CG2 HG22 sing N N 418 THR CG2 HG23 sing N N 419 THR OXT HXT sing N N 420 TRP N CA sing N N 421 TRP N H sing N N 422 TRP N H2 sing N N 423 TRP CA C sing N N 424 TRP CA CB sing N N 425 TRP CA HA sing N N 426 TRP C O doub N N 427 TRP C OXT sing N N 428 TRP CB CG sing N N 429 TRP CB HB2 sing N N 430 TRP CB HB3 sing N N 431 TRP CG CD1 doub Y N 432 TRP CG CD2 sing Y N 433 TRP CD1 NE1 sing Y N 434 TRP CD1 HD1 sing N N 435 TRP CD2 CE2 doub Y N 436 TRP CD2 CE3 sing Y N 437 TRP NE1 CE2 sing Y N 438 TRP NE1 HE1 sing N N 439 TRP CE2 CZ2 sing Y N 440 TRP CE3 CZ3 doub Y N 441 TRP CE3 HE3 sing N N 442 TRP CZ2 CH2 doub Y N 443 TRP CZ2 HZ2 sing N N 444 TRP CZ3 CH2 sing Y N 445 TRP CZ3 HZ3 sing N N 446 TRP CH2 HH2 sing N N 447 TRP OXT HXT sing N N 448 TYR N CA sing N N 449 TYR N H sing N N 450 TYR N H2 sing N N 451 TYR CA C sing N N 452 TYR CA CB sing N N 453 TYR CA HA sing N N 454 TYR C O doub N N 455 TYR C OXT sing N N 456 TYR CB CG sing N N 457 TYR CB HB2 sing N N 458 TYR CB HB3 sing N N 459 TYR CG CD1 doub Y N 460 TYR CG CD2 sing Y N 461 TYR CD1 CE1 sing Y N 462 TYR CD1 HD1 sing N N 463 TYR CD2 CE2 doub Y N 464 TYR CD2 HD2 sing N N 465 TYR CE1 CZ doub Y N 466 TYR CE1 HE1 sing N N 467 TYR CE2 CZ sing Y N 468 TYR CE2 HE2 sing N N 469 TYR CZ OH sing N N 470 TYR OH HH sing N N 471 TYR OXT HXT sing N N 472 U OP3 P sing N N 473 U OP3 HOP3 sing N N 474 U P OP1 doub N N 475 U P OP2 sing N N 476 U P "O5'" sing N N 477 U OP2 HOP2 sing N N 478 U "O5'" "C5'" sing N N 479 U "C5'" "C4'" sing N N 480 U "C5'" "H5'" sing N N 481 U "C5'" "H5''" sing N N 482 U "C4'" "O4'" sing N N 483 U "C4'" "C3'" sing N N 484 U "C4'" "H4'" sing N N 485 U "O4'" "C1'" sing N N 486 U "C3'" "O3'" sing N N 487 U "C3'" "C2'" sing N N 488 U "C3'" "H3'" sing N N 489 U "O3'" "HO3'" sing N N 490 U "C2'" "O2'" sing N N 491 U "C2'" "C1'" sing N N 492 U "C2'" "H2'" sing N N 493 U "O2'" "HO2'" sing N N 494 U "C1'" N1 sing N N 495 U "C1'" "H1'" sing N N 496 U N1 C2 sing N N 497 U N1 C6 sing N N 498 U C2 O2 doub N N 499 U C2 N3 sing N N 500 U N3 C4 sing N N 501 U N3 H3 sing N N 502 U C4 O4 doub N N 503 U C4 C5 sing N N 504 U C5 C6 doub N N 505 U C5 H5 sing N N 506 U C6 H6 sing N N 507 VAL N CA sing N N 508 VAL N H sing N N 509 VAL N H2 sing N N 510 VAL CA C sing N N 511 VAL CA CB sing N N 512 VAL CA HA sing N N 513 VAL C O doub N N 514 VAL C OXT sing N N 515 VAL CB CG1 sing N N 516 VAL CB CG2 sing N N 517 VAL CB HB sing N N 518 VAL CG1 HG11 sing N N 519 VAL CG1 HG12 sing N N 520 VAL CG1 HG13 sing N N 521 VAL CG2 HG21 sing N N 522 VAL CG2 HG22 sing N N 523 VAL CG2 HG23 sing N N 524 VAL OXT HXT sing N N 525 # _ndb_struct_conf_na.entry_id 5Z98 _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C G 3 1_555 D C 9 1_555 -0.783 -0.147 0.177 -0.881 -4.683 3.561 1 C_G3:C9_D C 3 ? D 9 ? 19 1 1 C C 4 1_555 D G 8 1_555 0.024 -0.290 0.161 0.798 -10.245 5.718 2 C_C4:G8_D C 4 ? D 8 ? 19 1 1 C C 5 1_555 D G 7 1_555 0.687 -0.502 0.286 -4.627 -2.300 0.865 3 C_C5:G7_D C 5 ? D 7 ? 19 1 1 C G 6 1_555 D C 6 1_555 -0.199 -0.221 0.109 -2.490 -8.371 5.914 4 C_G6:C6_D C 6 ? D 6 ? 19 1 1 C G 7 1_555 D C 5 1_555 -0.102 -0.290 0.127 1.142 -4.120 2.138 5 C_G7:C5_D C 7 ? D 5 ? 19 1 1 C G 8 1_555 D C 4 1_555 0.370 -0.389 0.314 0.700 -8.810 -1.343 6 C_G8:C4_D C 8 ? D 4 ? 19 1 1 C U 9 1_555 D A 3 1_555 0.278 -0.400 0.138 2.814 -9.430 -0.172 7 C_U9:A3_D C 9 ? D 3 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C G 3 1_555 D C 9 1_555 C C 4 1_555 D G 8 1_555 0.377 -1.797 3.149 1.323 3.902 36.702 -3.331 -0.427 2.960 6.173 -2.094 36.925 1 CC_G3C4:G8C9_DD C 3 ? D 9 ? C 4 ? D 8 ? 1 C C 4 1_555 D G 8 1_555 C C 5 1_555 D G 7 1_555 -0.455 -1.406 3.419 -2.753 4.392 34.628 -3.016 0.331 3.248 7.327 4.594 35.002 2 CC_C4C5:G7G8_DD C 4 ? D 8 ? C 5 ? D 7 ? 1 C C 5 1_555 D G 7 1_555 C G 6 1_555 D C 6 1_555 0.714 -2.225 3.005 3.647 5.189 24.935 -6.262 -0.717 2.573 11.776 -8.277 25.716 3 CC_C5G6:C6G7_DD C 5 ? D 7 ? C 6 ? D 6 ? 1 C G 6 1_555 D C 6 1_555 C G 7 1_555 D C 5 1_555 -0.933 -1.952 3.045 -3.334 4.332 29.865 -4.516 1.175 2.826 8.318 6.402 30.350 4 CC_G6G7:C5C6_DD C 6 ? D 6 ? C 7 ? D 5 ? 1 C G 7 1_555 D C 5 1_555 C G 8 1_555 D C 4 1_555 0.203 -1.691 3.300 0.339 2.043 32.732 -3.343 -0.302 3.194 3.620 -0.601 32.796 5 CC_G7G8:C4C5_DD C 7 ? D 5 ? C 8 ? D 4 ? 1 C G 8 1_555 D C 4 1_555 C U 9 1_555 D A 3 1_555 -0.445 -1.859 3.124 0.609 4.797 32.532 -4.033 0.882 2.820 8.504 -1.079 32.880 6 CC_G8U9:A3C4_DD C 8 ? D 4 ? C 9 ? D 3 ? # _pdbx_audit_support.funding_organization 'Japan Society for the Promotion of Science' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number JP15H04740 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5W3V _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #