data_5Z9W # _entry.id 5Z9W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5Z9W pdb_00005z9w 10.2210/pdb5z9w/pdb WWPDB D_1300006455 ? ? EMDB EMD-6903 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-10-24 2 'Structure model' 1 1 2018-11-07 3 'Structure model' 1 2 2018-11-14 4 'Structure model' 1 3 2019-11-06 5 'Structure model' 1 4 2020-12-16 6 'Structure model' 1 5 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' Other 7 5 'Structure model' 'Author supporting evidence' 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Database references' 10 6 'Structure model' 'Derived calculations' 11 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' atom_sites 4 4 'Structure model' cell 5 5 'Structure model' em_helical_entity 6 6 'Structure model' chem_comp_atom 7 6 'Structure model' chem_comp_bond 8 6 'Structure model' database_2 9 6 'Structure model' pdbx_struct_oper_list 10 6 'Structure model' refine # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 3 'Structure model' '_citation.journal_volume' 3 3 'Structure model' '_citation.page_first' 4 3 'Structure model' '_citation.page_last' 5 3 'Structure model' '_citation.title' 6 4 'Structure model' '_atom_sites.fract_transf_matrix[1][1]' 7 4 'Structure model' '_atom_sites.fract_transf_matrix[2][2]' 8 4 'Structure model' '_atom_sites.fract_transf_matrix[3][3]' 9 4 'Structure model' '_cell.Z_PDB' 10 5 'Structure model' '_em_helical_entity.axial_symmetry' 11 6 'Structure model' '_database_2.pdbx_DOI' 12 6 'Structure model' '_database_2.pdbx_database_accession' 13 6 'Structure model' '_pdbx_struct_oper_list.name' 14 6 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 15 6 'Structure model' '_pdbx_struct_oper_list.type' 16 6 'Structure model' '_refine.ls_d_res_high' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5Z9W _pdbx_database_status.recvd_initial_deposition_date 2018-02-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Ebola virus nucleoprotein-RNA complex' _pdbx_database_related.db_id EMD-6903 _pdbx_database_related.content_type 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sugita, Y.' 1 0000-0001-6861-4840 'Matsunami, H.' 2 ? 'Kawaoka, Y.' 3 ? 'Noda, T.' 4 ? 'Wolf, M.' 5 0000-0001-8480-0918 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nature _citation.journal_id_ASTM NATUAS _citation.journal_id_CSD 0006 _citation.journal_id_ISSN 1476-4687 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 563 _citation.language ? _citation.page_first 137 _citation.page_last 140 _citation.title 'Cryo-EM structure of the Ebola virus nucleoprotein-RNA complex at 3.6 angstrom resolution.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41586-018-0630-0 _citation.pdbx_database_id_PubMed 30333622 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sugita, Y.' 1 ? primary 'Matsunami, H.' 2 ? primary 'Kawaoka, Y.' 3 ? primary 'Noda, T.' 4 ? primary 'Wolf, M.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ebolavirus nucleoprotein (residues 19-406)' 43496.086 1 ? ? ? ? 2 polymer syn 'RNA (6-MER)' 1792.037 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MDYHKILTAGLSVQQGIVRQRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKY LEGHGFRFEVKKRDGVKRLEELLPAVSSGKNIKRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQV HAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQKT ERGVRLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGE QYQQLREAATEAEKQLQQYAESRELDHLGLDDQEKKILMNFHQKKNEISFQQTNAMVTLRKERLAKLT ; ;MDYHKILTAGLSVQQGIVRQRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKY LEGHGFRFEVKKRDGVKRLEELLPAVSSGKNIKRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQV HAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQKT ERGVRLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGE QYQQLREAATEAEKQLQQYAESRELDHLGLDDQEKKILMNFHQKKNEISFQQTNAMVTLRKERLAKLT ; A ? 2 polyribonucleotide no no UUUUUU UUUUUU R ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 TYR n 1 4 HIS n 1 5 LYS n 1 6 ILE n 1 7 LEU n 1 8 THR n 1 9 ALA n 1 10 GLY n 1 11 LEU n 1 12 SER n 1 13 VAL n 1 14 GLN n 1 15 GLN n 1 16 GLY n 1 17 ILE n 1 18 VAL n 1 19 ARG n 1 20 GLN n 1 21 ARG n 1 22 VAL n 1 23 ILE n 1 24 PRO n 1 25 VAL n 1 26 TYR n 1 27 GLN n 1 28 VAL n 1 29 ASN n 1 30 ASN n 1 31 LEU n 1 32 GLU n 1 33 GLU n 1 34 ILE n 1 35 CYS n 1 36 GLN n 1 37 LEU n 1 38 ILE n 1 39 ILE n 1 40 GLN n 1 41 ALA n 1 42 PHE n 1 43 GLU n 1 44 ALA n 1 45 GLY n 1 46 VAL n 1 47 ASP n 1 48 PHE n 1 49 GLN n 1 50 GLU n 1 51 SER n 1 52 ALA n 1 53 ASP n 1 54 SER n 1 55 PHE n 1 56 LEU n 1 57 LEU n 1 58 MET n 1 59 LEU n 1 60 CYS n 1 61 LEU n 1 62 HIS n 1 63 HIS n 1 64 ALA n 1 65 TYR n 1 66 GLN n 1 67 GLY n 1 68 ASP n 1 69 TYR n 1 70 LYS n 1 71 LEU n 1 72 PHE n 1 73 LEU n 1 74 GLU n 1 75 SER n 1 76 GLY n 1 77 ALA n 1 78 VAL n 1 79 LYS n 1 80 TYR n 1 81 LEU n 1 82 GLU n 1 83 GLY n 1 84 HIS n 1 85 GLY n 1 86 PHE n 1 87 ARG n 1 88 PHE n 1 89 GLU n 1 90 VAL n 1 91 LYS n 1 92 LYS n 1 93 ARG n 1 94 ASP n 1 95 GLY n 1 96 VAL n 1 97 LYS n 1 98 ARG n 1 99 LEU n 1 100 GLU n 1 101 GLU n 1 102 LEU n 1 103 LEU n 1 104 PRO n 1 105 ALA n 1 106 VAL n 1 107 SER n 1 108 SER n 1 109 GLY n 1 110 LYS n 1 111 ASN n 1 112 ILE n 1 113 LYS n 1 114 ARG n 1 115 THR n 1 116 LEU n 1 117 ALA n 1 118 ALA n 1 119 MET n 1 120 PRO n 1 121 GLU n 1 122 GLU n 1 123 GLU n 1 124 THR n 1 125 THR n 1 126 GLU n 1 127 ALA n 1 128 ASN n 1 129 ALA n 1 130 GLY n 1 131 GLN n 1 132 PHE n 1 133 LEU n 1 134 SER n 1 135 PHE n 1 136 ALA n 1 137 SER n 1 138 LEU n 1 139 PHE n 1 140 LEU n 1 141 PRO n 1 142 LYS n 1 143 LEU n 1 144 VAL n 1 145 VAL n 1 146 GLY n 1 147 GLU n 1 148 LYS n 1 149 ALA n 1 150 CYS n 1 151 LEU n 1 152 GLU n 1 153 LYS n 1 154 VAL n 1 155 GLN n 1 156 ARG n 1 157 GLN n 1 158 ILE n 1 159 GLN n 1 160 VAL n 1 161 HIS n 1 162 ALA n 1 163 GLU n 1 164 GLN n 1 165 GLY n 1 166 LEU n 1 167 ILE n 1 168 GLN n 1 169 TYR n 1 170 PRO n 1 171 THR n 1 172 ALA n 1 173 TRP n 1 174 GLN n 1 175 SER n 1 176 VAL n 1 177 GLY n 1 178 HIS n 1 179 MET n 1 180 MET n 1 181 VAL n 1 182 ILE n 1 183 PHE n 1 184 ARG n 1 185 LEU n 1 186 MET n 1 187 ARG n 1 188 THR n 1 189 ASN n 1 190 PHE n 1 191 LEU n 1 192 ILE n 1 193 LYS n 1 194 PHE n 1 195 LEU n 1 196 LEU n 1 197 ILE n 1 198 HIS n 1 199 GLN n 1 200 GLY n 1 201 MET n 1 202 HIS n 1 203 MET n 1 204 VAL n 1 205 ALA n 1 206 GLY n 1 207 HIS n 1 208 ASP n 1 209 ALA n 1 210 ASN n 1 211 ASP n 1 212 ALA n 1 213 VAL n 1 214 ILE n 1 215 SER n 1 216 ASN n 1 217 SER n 1 218 VAL n 1 219 ALA n 1 220 GLN n 1 221 ALA n 1 222 ARG n 1 223 PHE n 1 224 SER n 1 225 GLY n 1 226 LEU n 1 227 LEU n 1 228 ILE n 1 229 VAL n 1 230 LYS n 1 231 THR n 1 232 VAL n 1 233 LEU n 1 234 ASP n 1 235 HIS n 1 236 ILE n 1 237 LEU n 1 238 GLN n 1 239 LYS n 1 240 THR n 1 241 GLU n 1 242 ARG n 1 243 GLY n 1 244 VAL n 1 245 ARG n 1 246 LEU n 1 247 HIS n 1 248 PRO n 1 249 LEU n 1 250 ALA n 1 251 ARG n 1 252 THR n 1 253 ALA n 1 254 LYS n 1 255 VAL n 1 256 LYS n 1 257 ASN n 1 258 GLU n 1 259 VAL n 1 260 ASN n 1 261 SER n 1 262 PHE n 1 263 LYS n 1 264 ALA n 1 265 ALA n 1 266 LEU n 1 267 SER n 1 268 SER n 1 269 LEU n 1 270 ALA n 1 271 LYS n 1 272 HIS n 1 273 GLY n 1 274 GLU n 1 275 TYR n 1 276 ALA n 1 277 PRO n 1 278 PHE n 1 279 ALA n 1 280 ARG n 1 281 LEU n 1 282 LEU n 1 283 ASN n 1 284 LEU n 1 285 SER n 1 286 GLY n 1 287 VAL n 1 288 ASN n 1 289 ASN n 1 290 LEU n 1 291 GLU n 1 292 HIS n 1 293 GLY n 1 294 LEU n 1 295 PHE n 1 296 PRO n 1 297 GLN n 1 298 LEU n 1 299 SER n 1 300 ALA n 1 301 ILE n 1 302 ALA n 1 303 LEU n 1 304 GLY n 1 305 VAL n 1 306 ALA n 1 307 THR n 1 308 ALA n 1 309 HIS n 1 310 GLY n 1 311 SER n 1 312 THR n 1 313 LEU n 1 314 ALA n 1 315 GLY n 1 316 VAL n 1 317 ASN n 1 318 VAL n 1 319 GLY n 1 320 GLU n 1 321 GLN n 1 322 TYR n 1 323 GLN n 1 324 GLN n 1 325 LEU n 1 326 ARG n 1 327 GLU n 1 328 ALA n 1 329 ALA n 1 330 THR n 1 331 GLU n 1 332 ALA n 1 333 GLU n 1 334 LYS n 1 335 GLN n 1 336 LEU n 1 337 GLN n 1 338 GLN n 1 339 TYR n 1 340 ALA n 1 341 GLU n 1 342 SER n 1 343 ARG n 1 344 GLU n 1 345 LEU n 1 346 ASP n 1 347 HIS n 1 348 LEU n 1 349 GLY n 1 350 LEU n 1 351 ASP n 1 352 ASP n 1 353 GLN n 1 354 GLU n 1 355 LYS n 1 356 LYS n 1 357 ILE n 1 358 LEU n 1 359 MET n 1 360 ASN n 1 361 PHE n 1 362 HIS n 1 363 GLN n 1 364 LYS n 1 365 LYS n 1 366 ASN n 1 367 GLU n 1 368 ILE n 1 369 SER n 1 370 PHE n 1 371 GLN n 1 372 GLN n 1 373 THR n 1 374 ASN n 1 375 ALA n 1 376 MET n 1 377 VAL n 1 378 THR n 1 379 LEU n 1 380 ARG n 1 381 LYS n 1 382 GLU n 1 383 ARG n 1 384 LEU n 1 385 ALA n 1 386 LYS n 1 387 LEU n 1 388 THR n 2 1 U n 2 2 U n 2 3 U n 2 4 U n 2 5 U n 2 6 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 388 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue 'embryonic kidney' _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293T _entity_src_gen.pdbx_host_org_atcc 293T _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell epithelial _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 19 19 MET MET A . n A 1 2 ASP 2 20 20 ASP ASP A . n A 1 3 TYR 3 21 21 TYR TYR A . n A 1 4 HIS 4 22 22 HIS HIS A . n A 1 5 LYS 5 23 23 LYS LYS A . n A 1 6 ILE 6 24 24 ILE ILE A . n A 1 7 LEU 7 25 25 LEU LEU A . n A 1 8 THR 8 26 26 THR THR A . n A 1 9 ALA 9 27 27 ALA ALA A . n A 1 10 GLY 10 28 28 GLY GLY A . n A 1 11 LEU 11 29 29 LEU LEU A . n A 1 12 SER 12 30 30 SER SER A . n A 1 13 VAL 13 31 31 VAL VAL A . n A 1 14 GLN 14 32 32 GLN GLN A . n A 1 15 GLN 15 33 33 GLN GLN A . n A 1 16 GLY 16 34 34 GLY GLY A . n A 1 17 ILE 17 35 35 ILE ILE A . n A 1 18 VAL 18 36 36 VAL VAL A . n A 1 19 ARG 19 37 37 ARG ARG A . n A 1 20 GLN 20 38 38 GLN GLN A . n A 1 21 ARG 21 39 39 ARG ARG A . n A 1 22 VAL 22 40 40 VAL VAL A . n A 1 23 ILE 23 41 41 ILE ILE A . n A 1 24 PRO 24 42 42 PRO PRO A . n A 1 25 VAL 25 43 43 VAL VAL A . n A 1 26 TYR 26 44 44 TYR TYR A . n A 1 27 GLN 27 45 45 GLN GLN A . n A 1 28 VAL 28 46 46 VAL VAL A . n A 1 29 ASN 29 47 47 ASN ASN A . n A 1 30 ASN 30 48 48 ASN ASN A . n A 1 31 LEU 31 49 49 LEU LEU A . n A 1 32 GLU 32 50 50 GLU GLU A . n A 1 33 GLU 33 51 51 GLU GLU A . n A 1 34 ILE 34 52 52 ILE ILE A . n A 1 35 CYS 35 53 53 CYS CYS A . n A 1 36 GLN 36 54 54 GLN GLN A . n A 1 37 LEU 37 55 55 LEU LEU A . n A 1 38 ILE 38 56 56 ILE ILE A . n A 1 39 ILE 39 57 57 ILE ILE A . n A 1 40 GLN 40 58 58 GLN GLN A . n A 1 41 ALA 41 59 59 ALA ALA A . n A 1 42 PHE 42 60 60 PHE PHE A . n A 1 43 GLU 43 61 61 GLU GLU A . n A 1 44 ALA 44 62 62 ALA ALA A . n A 1 45 GLY 45 63 63 GLY GLY A . n A 1 46 VAL 46 64 64 VAL VAL A . n A 1 47 ASP 47 65 65 ASP ASP A . n A 1 48 PHE 48 66 66 PHE PHE A . n A 1 49 GLN 49 67 67 GLN GLN A . n A 1 50 GLU 50 68 68 GLU GLU A . n A 1 51 SER 51 69 69 SER SER A . n A 1 52 ALA 52 70 70 ALA ALA A . n A 1 53 ASP 53 71 71 ASP ASP A . n A 1 54 SER 54 72 72 SER SER A . n A 1 55 PHE 55 73 73 PHE PHE A . n A 1 56 LEU 56 74 74 LEU LEU A . n A 1 57 LEU 57 75 75 LEU LEU A . n A 1 58 MET 58 76 76 MET MET A . n A 1 59 LEU 59 77 77 LEU LEU A . n A 1 60 CYS 60 78 78 CYS CYS A . n A 1 61 LEU 61 79 79 LEU LEU A . n A 1 62 HIS 62 80 80 HIS HIS A . n A 1 63 HIS 63 81 81 HIS HIS A . n A 1 64 ALA 64 82 82 ALA ALA A . n A 1 65 TYR 65 83 83 TYR TYR A . n A 1 66 GLN 66 84 84 GLN GLN A . n A 1 67 GLY 67 85 85 GLY GLY A . n A 1 68 ASP 68 86 86 ASP ASP A . n A 1 69 TYR 69 87 87 TYR TYR A . n A 1 70 LYS 70 88 88 LYS LYS A . n A 1 71 LEU 71 89 89 LEU LEU A . n A 1 72 PHE 72 90 90 PHE PHE A . n A 1 73 LEU 73 91 91 LEU LEU A . n A 1 74 GLU 74 92 92 GLU GLU A . n A 1 75 SER 75 93 93 SER SER A . n A 1 76 GLY 76 94 94 GLY GLY A . n A 1 77 ALA 77 95 95 ALA ALA A . n A 1 78 VAL 78 96 96 VAL VAL A . n A 1 79 LYS 79 97 97 LYS LYS A . n A 1 80 TYR 80 98 98 TYR TYR A . n A 1 81 LEU 81 99 99 LEU LEU A . n A 1 82 GLU 82 100 100 GLU GLU A . n A 1 83 GLY 83 101 101 GLY GLY A . n A 1 84 HIS 84 102 102 HIS HIS A . n A 1 85 GLY 85 103 103 GLY GLY A . n A 1 86 PHE 86 104 104 PHE PHE A . n A 1 87 ARG 87 105 105 ARG ARG A . n A 1 88 PHE 88 106 106 PHE PHE A . n A 1 89 GLU 89 107 107 GLU GLU A . n A 1 90 VAL 90 108 108 VAL VAL A . n A 1 91 LYS 91 109 109 LYS LYS A . n A 1 92 LYS 92 110 110 LYS LYS A . n A 1 93 ARG 93 111 111 ARG ARG A . n A 1 94 ASP 94 112 112 ASP ASP A . n A 1 95 GLY 95 113 113 GLY GLY A . n A 1 96 VAL 96 114 114 VAL VAL A . n A 1 97 LYS 97 115 115 LYS LYS A . n A 1 98 ARG 98 116 116 ARG ARG A . n A 1 99 LEU 99 117 117 LEU LEU A . n A 1 100 GLU 100 118 118 GLU GLU A . n A 1 101 GLU 101 119 119 GLU GLU A . n A 1 102 LEU 102 120 120 LEU LEU A . n A 1 103 LEU 103 121 121 LEU LEU A . n A 1 104 PRO 104 122 122 PRO PRO A . n A 1 105 ALA 105 123 123 ALA ALA A . n A 1 106 VAL 106 124 124 VAL VAL A . n A 1 107 SER 107 125 125 SER SER A . n A 1 108 SER 108 126 126 SER SER A . n A 1 109 GLY 109 127 127 GLY GLY A . n A 1 110 LYS 110 128 128 LYS LYS A . n A 1 111 ASN 111 129 129 ASN ASN A . n A 1 112 ILE 112 130 130 ILE ILE A . n A 1 113 LYS 113 131 131 LYS LYS A . n A 1 114 ARG 114 132 132 ARG ARG A . n A 1 115 THR 115 133 133 THR THR A . n A 1 116 LEU 116 134 134 LEU LEU A . n A 1 117 ALA 117 135 135 ALA ALA A . n A 1 118 ALA 118 136 136 ALA ALA A . n A 1 119 MET 119 137 137 MET MET A . n A 1 120 PRO 120 138 138 PRO PRO A . n A 1 121 GLU 121 139 139 GLU GLU A . n A 1 122 GLU 122 140 140 GLU GLU A . n A 1 123 GLU 123 141 141 GLU GLU A . n A 1 124 THR 124 142 142 THR THR A . n A 1 125 THR 125 143 143 THR THR A . n A 1 126 GLU 126 144 144 GLU GLU A . n A 1 127 ALA 127 145 145 ALA ALA A . n A 1 128 ASN 128 146 146 ASN ASN A . n A 1 129 ALA 129 147 147 ALA ALA A . n A 1 130 GLY 130 148 148 GLY GLY A . n A 1 131 GLN 131 149 149 GLN GLN A . n A 1 132 PHE 132 150 150 PHE PHE A . n A 1 133 LEU 133 151 151 LEU LEU A . n A 1 134 SER 134 152 152 SER SER A . n A 1 135 PHE 135 153 153 PHE PHE A . n A 1 136 ALA 136 154 154 ALA ALA A . n A 1 137 SER 137 155 155 SER SER A . n A 1 138 LEU 138 156 156 LEU LEU A . n A 1 139 PHE 139 157 157 PHE PHE A . n A 1 140 LEU 140 158 158 LEU LEU A . n A 1 141 PRO 141 159 159 PRO PRO A . n A 1 142 LYS 142 160 160 LYS LYS A . n A 1 143 LEU 143 161 161 LEU LEU A . n A 1 144 VAL 144 162 162 VAL VAL A . n A 1 145 VAL 145 163 163 VAL VAL A . n A 1 146 GLY 146 164 164 GLY GLY A . n A 1 147 GLU 147 165 165 GLU GLU A . n A 1 148 LYS 148 166 166 LYS LYS A . n A 1 149 ALA 149 167 167 ALA ALA A . n A 1 150 CYS 150 168 168 CYS CYS A . n A 1 151 LEU 151 169 169 LEU LEU A . n A 1 152 GLU 152 170 170 GLU GLU A . n A 1 153 LYS 153 171 171 LYS LYS A . n A 1 154 VAL 154 172 172 VAL VAL A . n A 1 155 GLN 155 173 173 GLN GLN A . n A 1 156 ARG 156 174 174 ARG ARG A . n A 1 157 GLN 157 175 175 GLN GLN A . n A 1 158 ILE 158 176 176 ILE ILE A . n A 1 159 GLN 159 177 177 GLN GLN A . n A 1 160 VAL 160 178 178 VAL VAL A . n A 1 161 HIS 161 179 179 HIS HIS A . n A 1 162 ALA 162 180 180 ALA ALA A . n A 1 163 GLU 163 181 181 GLU GLU A . n A 1 164 GLN 164 182 182 GLN GLN A . n A 1 165 GLY 165 183 183 GLY GLY A . n A 1 166 LEU 166 184 184 LEU LEU A . n A 1 167 ILE 167 185 185 ILE ILE A . n A 1 168 GLN 168 186 186 GLN GLN A . n A 1 169 TYR 169 187 187 TYR TYR A . n A 1 170 PRO 170 188 188 PRO PRO A . n A 1 171 THR 171 189 189 THR THR A . n A 1 172 ALA 172 190 190 ALA ALA A . n A 1 173 TRP 173 191 191 TRP TRP A . n A 1 174 GLN 174 192 192 GLN GLN A . n A 1 175 SER 175 193 193 SER SER A . n A 1 176 VAL 176 194 194 VAL VAL A . n A 1 177 GLY 177 195 195 GLY GLY A . n A 1 178 HIS 178 196 196 HIS HIS A . n A 1 179 MET 179 197 197 MET MET A . n A 1 180 MET 180 198 198 MET MET A . n A 1 181 VAL 181 199 199 VAL VAL A . n A 1 182 ILE 182 200 200 ILE ILE A . n A 1 183 PHE 183 201 201 PHE PHE A . n A 1 184 ARG 184 202 202 ARG ARG A . n A 1 185 LEU 185 203 203 LEU LEU A . n A 1 186 MET 186 204 204 MET MET A . n A 1 187 ARG 187 205 205 ARG ARG A . n A 1 188 THR 188 206 206 THR THR A . n A 1 189 ASN 189 207 207 ASN ASN A . n A 1 190 PHE 190 208 208 PHE PHE A . n A 1 191 LEU 191 209 209 LEU LEU A . n A 1 192 ILE 192 210 210 ILE ILE A . n A 1 193 LYS 193 211 211 LYS LYS A . n A 1 194 PHE 194 212 212 PHE PHE A . n A 1 195 LEU 195 213 213 LEU LEU A . n A 1 196 LEU 196 214 214 LEU LEU A . n A 1 197 ILE 197 215 215 ILE ILE A . n A 1 198 HIS 198 216 216 HIS HIS A . n A 1 199 GLN 199 217 217 GLN GLN A . n A 1 200 GLY 200 218 218 GLY GLY A . n A 1 201 MET 201 219 219 MET MET A . n A 1 202 HIS 202 220 220 HIS HIS A . n A 1 203 MET 203 221 221 MET MET A . n A 1 204 VAL 204 222 222 VAL VAL A . n A 1 205 ALA 205 223 223 ALA ALA A . n A 1 206 GLY 206 224 224 GLY GLY A . n A 1 207 HIS 207 225 225 HIS HIS A . n A 1 208 ASP 208 226 226 ASP ASP A . n A 1 209 ALA 209 227 227 ALA ALA A . n A 1 210 ASN 210 228 228 ASN ASN A . n A 1 211 ASP 211 229 229 ASP ASP A . n A 1 212 ALA 212 230 230 ALA ALA A . n A 1 213 VAL 213 231 231 VAL VAL A . n A 1 214 ILE 214 232 232 ILE ILE A . n A 1 215 SER 215 233 233 SER SER A . n A 1 216 ASN 216 234 234 ASN ASN A . n A 1 217 SER 217 235 235 SER SER A . n A 1 218 VAL 218 236 236 VAL VAL A . n A 1 219 ALA 219 237 237 ALA ALA A . n A 1 220 GLN 220 238 238 GLN GLN A . n A 1 221 ALA 221 239 239 ALA ALA A . n A 1 222 ARG 222 240 240 ARG ARG A . n A 1 223 PHE 223 241 241 PHE PHE A . n A 1 224 SER 224 242 242 SER SER A . n A 1 225 GLY 225 243 243 GLY GLY A . n A 1 226 LEU 226 244 244 LEU LEU A . n A 1 227 LEU 227 245 245 LEU LEU A . n A 1 228 ILE 228 246 246 ILE ILE A . n A 1 229 VAL 229 247 247 VAL VAL A . n A 1 230 LYS 230 248 248 LYS LYS A . n A 1 231 THR 231 249 249 THR THR A . n A 1 232 VAL 232 250 250 VAL VAL A . n A 1 233 LEU 233 251 251 LEU LEU A . n A 1 234 ASP 234 252 252 ASP ASP A . n A 1 235 HIS 235 253 253 HIS HIS A . n A 1 236 ILE 236 254 254 ILE ILE A . n A 1 237 LEU 237 255 255 LEU LEU A . n A 1 238 GLN 238 256 256 GLN GLN A . n A 1 239 LYS 239 257 257 LYS LYS A . n A 1 240 THR 240 258 258 THR THR A . n A 1 241 GLU 241 259 259 GLU GLU A . n A 1 242 ARG 242 260 260 ARG ARG A . n A 1 243 GLY 243 261 261 GLY GLY A . n A 1 244 VAL 244 262 262 VAL VAL A . n A 1 245 ARG 245 263 263 ARG ARG A . n A 1 246 LEU 246 264 264 LEU LEU A . n A 1 247 HIS 247 265 265 HIS HIS A . n A 1 248 PRO 248 266 266 PRO PRO A . n A 1 249 LEU 249 267 267 LEU LEU A . n A 1 250 ALA 250 268 268 ALA ALA A . n A 1 251 ARG 251 269 269 ARG ARG A . n A 1 252 THR 252 270 270 THR THR A . n A 1 253 ALA 253 271 271 ALA ALA A . n A 1 254 LYS 254 272 272 LYS LYS A . n A 1 255 VAL 255 273 273 VAL VAL A . n A 1 256 LYS 256 274 274 LYS LYS A . n A 1 257 ASN 257 275 275 ASN ASN A . n A 1 258 GLU 258 276 276 GLU GLU A . n A 1 259 VAL 259 277 277 VAL VAL A . n A 1 260 ASN 260 278 278 ASN ASN A . n A 1 261 SER 261 279 279 SER SER A . n A 1 262 PHE 262 280 280 PHE PHE A . n A 1 263 LYS 263 281 281 LYS LYS A . n A 1 264 ALA 264 282 282 ALA ALA A . n A 1 265 ALA 265 283 283 ALA ALA A . n A 1 266 LEU 266 284 284 LEU LEU A . n A 1 267 SER 267 285 285 SER SER A . n A 1 268 SER 268 286 286 SER SER A . n A 1 269 LEU 269 287 287 LEU LEU A . n A 1 270 ALA 270 288 288 ALA ALA A . n A 1 271 LYS 271 289 289 LYS LYS A . n A 1 272 HIS 272 290 290 HIS HIS A . n A 1 273 GLY 273 291 291 GLY GLY A . n A 1 274 GLU 274 292 292 GLU GLU A . n A 1 275 TYR 275 293 293 TYR TYR A . n A 1 276 ALA 276 294 294 ALA ALA A . n A 1 277 PRO 277 295 295 PRO PRO A . n A 1 278 PHE 278 296 296 PHE PHE A . n A 1 279 ALA 279 297 297 ALA ALA A . n A 1 280 ARG 280 298 298 ARG ARG A . n A 1 281 LEU 281 299 299 LEU LEU A . n A 1 282 LEU 282 300 300 LEU LEU A . n A 1 283 ASN 283 301 301 ASN ASN A . n A 1 284 LEU 284 302 302 LEU LEU A . n A 1 285 SER 285 303 303 SER SER A . n A 1 286 GLY 286 304 304 GLY GLY A . n A 1 287 VAL 287 305 305 VAL VAL A . n A 1 288 ASN 288 306 306 ASN ASN A . n A 1 289 ASN 289 307 307 ASN ASN A . n A 1 290 LEU 290 308 308 LEU LEU A . n A 1 291 GLU 291 309 309 GLU GLU A . n A 1 292 HIS 292 310 310 HIS HIS A . n A 1 293 GLY 293 311 311 GLY GLY A . n A 1 294 LEU 294 312 312 LEU LEU A . n A 1 295 PHE 295 313 313 PHE PHE A . n A 1 296 PRO 296 314 314 PRO PRO A . n A 1 297 GLN 297 315 315 GLN GLN A . n A 1 298 LEU 298 316 316 LEU LEU A . n A 1 299 SER 299 317 317 SER SER A . n A 1 300 ALA 300 318 318 ALA ALA A . n A 1 301 ILE 301 319 319 ILE ILE A . n A 1 302 ALA 302 320 320 ALA ALA A . n A 1 303 LEU 303 321 321 LEU LEU A . n A 1 304 GLY 304 322 322 GLY GLY A . n A 1 305 VAL 305 323 323 VAL VAL A . n A 1 306 ALA 306 324 324 ALA ALA A . n A 1 307 THR 307 325 325 THR THR A . n A 1 308 ALA 308 326 326 ALA ALA A . n A 1 309 HIS 309 327 327 HIS HIS A . n A 1 310 GLY 310 328 328 GLY GLY A . n A 1 311 SER 311 329 329 SER SER A . n A 1 312 THR 312 330 330 THR THR A . n A 1 313 LEU 313 331 331 LEU LEU A . n A 1 314 ALA 314 332 332 ALA ALA A . n A 1 315 GLY 315 333 333 GLY GLY A . n A 1 316 VAL 316 334 334 VAL VAL A . n A 1 317 ASN 317 335 335 ASN ASN A . n A 1 318 VAL 318 336 336 VAL VAL A . n A 1 319 GLY 319 337 337 GLY GLY A . n A 1 320 GLU 320 338 338 GLU GLU A . n A 1 321 GLN 321 339 339 GLN GLN A . n A 1 322 TYR 322 340 340 TYR TYR A . n A 1 323 GLN 323 341 341 GLN GLN A . n A 1 324 GLN 324 342 342 GLN GLN A . n A 1 325 LEU 325 343 343 LEU LEU A . n A 1 326 ARG 326 344 344 ARG ARG A . n A 1 327 GLU 327 345 345 GLU GLU A . n A 1 328 ALA 328 346 346 ALA ALA A . n A 1 329 ALA 329 347 347 ALA ALA A . n A 1 330 THR 330 348 348 THR THR A . n A 1 331 GLU 331 349 349 GLU GLU A . n A 1 332 ALA 332 350 350 ALA ALA A . n A 1 333 GLU 333 351 351 GLU GLU A . n A 1 334 LYS 334 352 352 LYS LYS A . n A 1 335 GLN 335 353 353 GLN GLN A . n A 1 336 LEU 336 354 354 LEU LEU A . n A 1 337 GLN 337 355 355 GLN GLN A . n A 1 338 GLN 338 356 356 GLN GLN A . n A 1 339 TYR 339 357 357 TYR TYR A . n A 1 340 ALA 340 358 358 ALA ALA A . n A 1 341 GLU 341 359 359 GLU GLU A . n A 1 342 SER 342 360 360 SER SER A . n A 1 343 ARG 343 361 361 ARG ARG A . n A 1 344 GLU 344 362 362 GLU GLU A . n A 1 345 LEU 345 363 363 LEU LEU A . n A 1 346 ASP 346 364 364 ASP ASP A . n A 1 347 HIS 347 365 365 HIS HIS A . n A 1 348 LEU 348 366 366 LEU LEU A . n A 1 349 GLY 349 367 367 GLY GLY A . n A 1 350 LEU 350 368 368 LEU LEU A . n A 1 351 ASP 351 369 369 ASP ASP A . n A 1 352 ASP 352 370 370 ASP ASP A . n A 1 353 GLN 353 371 371 GLN GLN A . n A 1 354 GLU 354 372 372 GLU GLU A . n A 1 355 LYS 355 373 373 LYS LYS A . n A 1 356 LYS 356 374 374 LYS LYS A . n A 1 357 ILE 357 375 375 ILE ILE A . n A 1 358 LEU 358 376 376 LEU LEU A . n A 1 359 MET 359 377 377 MET MET A . n A 1 360 ASN 360 378 378 ASN ASN A . n A 1 361 PHE 361 379 379 PHE PHE A . n A 1 362 HIS 362 380 380 HIS HIS A . n A 1 363 GLN 363 381 381 GLN GLN A . n A 1 364 LYS 364 382 382 LYS LYS A . n A 1 365 LYS 365 383 383 LYS LYS A . n A 1 366 ASN 366 384 384 ASN ASN A . n A 1 367 GLU 367 385 385 GLU GLU A . n A 1 368 ILE 368 386 386 ILE ILE A . n A 1 369 SER 369 387 387 SER SER A . n A 1 370 PHE 370 388 388 PHE PHE A . n A 1 371 GLN 371 389 389 GLN GLN A . n A 1 372 GLN 372 390 390 GLN GLN A . n A 1 373 THR 373 391 391 THR THR A . n A 1 374 ASN 374 392 392 ASN ASN A . n A 1 375 ALA 375 393 393 ALA ALA A . n A 1 376 MET 376 394 394 MET MET A . n A 1 377 VAL 377 395 395 VAL VAL A . n A 1 378 THR 378 396 396 THR THR A . n A 1 379 LEU 379 397 397 LEU LEU A . n A 1 380 ARG 380 398 398 ARG ARG A . n A 1 381 LYS 381 399 399 LYS LYS A . n A 1 382 GLU 382 400 400 GLU GLU A . n A 1 383 ARG 383 401 401 ARG ARG A . n A 1 384 LEU 384 402 402 LEU LEU A . n A 1 385 ALA 385 403 403 ALA ALA A . n A 1 386 LYS 386 404 404 LYS LYS A . n A 1 387 LEU 387 405 405 LEU LEU A . n A 1 388 THR 388 406 406 THR THR A . n B 2 1 U 1 1 1 U U R . n B 2 2 U 2 2 2 U U R . n B 2 3 U 3 3 3 U U R . n B 2 4 U 4 4 4 U U R . n B 2 5 U 5 5 5 U U R . n B 2 6 U 6 6 6 U U R . n # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.13_2998: _software.pdbx_ordinal 1 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5Z9W _cell.details ? _cell.formula_units_Z ? _cell.length_a 1 _cell.length_a_esd ? _cell.length_b 1 _cell.length_b_esd ? _cell.length_c 1 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 1 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Z9W _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5Z9W _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5Z9W _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.6 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _struct.entry_id 5Z9W _struct.title 'Ebola virus nucleoprotein-RNA complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5Z9W _struct_keywords.text 'ebolavirus, RNA, nucleoprotein, nucleocapsid, helical, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 5Z9W 5Z9W ? 1 ? 1 2 PDB 5Z9W 5Z9W ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5Z9W A 1 ? 388 ? 5Z9W 19 ? 406 ? 19 406 2 2 5Z9W R 1 ? 6 ? 5Z9W 1 ? 6 ? 1 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details 'representative helical assembly' _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details helical _pdbx_struct_assembly.oligomeric_count 51 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression ;1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51 ; _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support microscopy _pdbx_struct_assembly_auth_evidence.details 'helical diffraction' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'helical symmetry operation' ? ? 0.98965100 -0.14349200 0.00006200 31.98069 0.14349200 0.98965100 0.00004800 -27.71136 -0.00006800 -0.00003800 1.00000000 -75.22779 3 'helical symmetry operation' ? ? 0.99361100 0.11285700 -0.00005300 -22.09336 -0.11285700 0.99361100 -0.00003100 24.75336 0.00004900 0.00003700 1.00000000 -72.25798 4 'helical symmetry operation' ? ? 0.93226100 0.36178700 -0.00018500 -61.05051 -0.36178700 0.93226100 -0.00007800 89.24229 0.00014400 0.00014000 1.00000000 -69.28881 5 'helical symmetry operation' ? ? 0.80963200 0.58693800 -0.00032400 -82.33058 -0.58693800 0.80963200 -0.00009000 161.51755 0.00020900 0.00026300 1.00000000 -66.31808 6 'helical symmetry operation' ? ? 0.63378600 0.77350900 -0.00046100 -84.53457 -0.77350900 0.63378600 -0.00006600 236.82782 0.00024100 0.00039900 1.00000000 -63.34301 7 'helical symmetry operation' ? ? 0.41628000 0.90923600 -0.00058800 -67.51753 -0.90923600 0.41628000 -0.00000800 310.22330 0.00023700 0.00053800 1.00000000 -60.36121 8 'helical symmetry operation' ? ? 0.17141300 0.98519900 -0.00069600 -32.39868 -0.98519900 0.17141300 0.00008000 376.87945 0.00019800 0.00067200 1.00000000 -57.37080 9 'helical symmetry operation' ? ? -0.08472200 0.99640400 -0.00077900 18.51401 -0.99640500 -0.08472200 0.00019300 432.41563 0.00012600 0.00079200 1.00000000 -54.37076 10 'helical symmetry operation' ? ? -0.33528700 0.94211600 -0.00082900 81.87385 -0.94211600 -0.33528700 0.00032300 473.18066 0.00002600 0.00088900 1.00000000 -51.36009 11 'helical symmetry operation' ? ? -0.56381400 0.82590200 -0.00084500 153.51609 -0.82590200 -0.56381400 0.00046200 496.49584 -0.00009500 0.00095800 1.00000000 -48.33930 12 'helical symmetry operation' ? ? -0.75528200 0.65540000 -0.00082500 228.73199 -0.65540000 -0.75528200 0.00060000 500.82841 -0.00023000 0.00099400 0.99999900 -45.30855 13 'helical symmetry operation' ? ? -0.89710400 0.44181900 -0.00077100 302.57679 -0.44181900 -0.89710400 0.00072800 485.89376 -0.00037000 0.00099400 0.99999900 -42.26962 14 'helical symmetry operation' ? ? -0.97995900 0.19919700 -0.00068600 370.19686 -0.19919700 -0.97995900 0.00083900 452.67360 -0.00050500 0.00095900 0.99999900 -39.22417 15 'helical symmetry operation' ? ? -0.99840100 -0.05651900 -0.00057500 427.14799 0.05651900 -0.99840100 0.00092400 403.35170 -0.00062700 0.00089000 0.99999900 -36.17462 16 'helical symmetry operation' ? ? -0.95121800 -0.30851900 -0.00044700 469.68583 0.30851900 -0.95121800 0.00097900 341.17004 -0.00072700 0.00079300 0.99999900 -33.12364 17 'helical symmetry operation' ? ? -0.84151100 -0.54024000 -0.00030900 495.01481 0.54024000 -0.84151100 0.00099800 270.21602 -0.00079900 0.00067400 0.99999900 -30.07383 18 'helical symmetry operation' ? ? -0.67649000 -0.73645200 -0.00017000 501.46984 0.73645200 -0.67649000 0.00098300 195.15307 -0.00083800 0.00054000 1.00000000 -27.02780 19 'helical symmetry operation' ? ? -0.46700400 -0.88425500 -0.00004000 488.62642 0.88425500 -0.46700400 0.00093200 120.91615 -0.00084300 0.00040000 1.00000000 -23.98792 20 'helical symmetry operation' ? ? -0.22682100 -0.97393600 0.00007300 457.32892 0.97393600 -0.22682100 0.00085000 52.38414 -0.00081100 0.00026400 1.00000000 -20.95624 21 'helical symmetry operation' ? ? 0.02827100 -0.99960000 0.00016200 409.63448 0.99960000 0.02827100 0.00074200 -5.93781 -0.00074600 0.00014100 1.00000000 -17.93417 22 'helical symmetry operation' ? ? 0.28150500 -0.95956000 0.00022000 348.67794 0.95956000 0.28150500 0.00061500 -50.21640 -0.00065200 0.00003800 1.00000000 -14.92238 23 'helical symmetry operation' ? ? 0.51623500 -0.85644700 0.00024300 278.46590 0.85644700 0.51623500 0.00047700 -77.54064 -0.00053400 -0.00003800 1.00000000 -11.92112 24 'helical symmetry operation' ? ? 0.71703200 -0.69704000 0.00023100 203.61372 0.69704000 0.71703200 0.00033800 -86.11468 -0.00040200 -0.00008100 1.00000000 -8.92971 25 'helical symmetry operation' ? ? 0.87069900 -0.49181600 0.00018400 129.04099 0.49181600 0.87069900 0.00020800 -75.37500 -0.00026300 -0.00009000 1.00000000 -5.94673 26 'helical symmetry operation' ? ? 0.96713500 -0.25426400 0.00010600 59.64915 0.25426400 0.96713500 0.00009100 -46.02690 -0.00012500 -0.00006200 1.00000000 -2.97115 27 'helical symmetry operation' ? ? 0.96713500 0.25426400 -0.00012500 -45.98619 -0.25426400 0.96713500 -0.00006200 59.68065 0.00010600 0.00009100 1.00000000 2.96912 28 'helical symmetry operation' ? ? 0.87069900 0.49181600 -0.00026200 -75.28678 -0.49181600 0.87069900 -0.00008900 129.09277 0.00018400 0.00020700 1.00000000 5.93882 29 'helical symmetry operation' ? ? 0.71703200 0.69704000 -0.00040200 -85.97576 -0.69704000 0.71703200 -0.00008100 203.67325 0.00023100 0.00033800 1.00000000 8.91160 30 'helical symmetry operation' ? ? 0.51623500 0.85644700 -0.00053400 -77.35082 -0.85644700 0.51623500 -0.00003800 278.52001 0.00024300 0.00047700 1.00000000 11.89030 31 'helical symmetry operation' ? ? 0.28150500 0.95956000 -0.00065200 -49.97875 -0.95956000 0.28150500 0.00003800 348.71405 0.00022000 0.00061500 1.00000000 14.87668 32 'helical symmetry operation' ? ? 0.02827100 0.99960000 -0.00074600 -5.65854 -0.99960000 0.02827100 0.00014100 409.64115 0.00016200 0.00074200 1.00000000 17.87233 33 'helical symmetry operation' ? ? -0.22682100 0.97393600 -0.00081000 52.69601 -0.97393600 -0.22682100 0.00026400 457.29664 0.00007300 0.00084900 1.00000000 20.87845 34 'helical symmetry operation' ? ? -0.46700400 0.88425500 -0.00084400 121.24977 -0.88425500 -0.46700400 0.00040000 488.54836 -0.00004000 0.00093300 1.00000000 23.89456 35 'helical symmetry operation' ? ? -0.67649000 0.73645200 -0.00083700 195.49561 -0.73645200 -0.67649000 0.00054000 501.34201 -0.00016900 0.00098200 1.00000000 26.92122 36 'helical symmetry operation' ? ? -0.84151100 0.54024000 -0.00079900 270.55476 -0.54024000 -0.84151100 0.00067400 494.83681 -0.00030900 0.00099800 0.99999900 29.95673 37 'helical symmetry operation' ? ? -0.95121800 0.30852000 -0.00072700 341.49198 -0.30852000 -0.95121700 0.00079300 469.46056 -0.00044700 0.00097900 0.99999900 32.99961 38 'helical symmetry operation' ? ? -0.99840100 0.05651800 -0.00062600 403.64567 -0.05651800 -0.99840100 0.00089000 426.88087 -0.00057400 0.00092400 0.99999900 36.04740 39 'helical symmetry operation' ? ? -0.97995900 -0.19919700 -0.00050500 452.92947 0.19919700 -0.97995900 0.00095900 369.89716 -0.00068600 0.00083900 0.99999900 39.09829 40 'helical symmetry operation' ? ? -0.89710400 -0.44181900 -0.00037000 486.10439 0.44181900 -0.89710400 0.00099400 302.25510 -0.00077100 0.00072800 0.99999900 42.14894 41 'helical symmetry operation' ? ? -0.75528200 -0.65540000 -0.00023000 500.98972 0.65540000 -0.75528200 0.00099500 228.40050 -0.00082600 0.00060000 0.99999900 45.19696 42 'helical symmetry operation' ? ? -0.56381400 -0.82590200 -0.00009500 496.60681 0.82590200 -0.56381400 0.00095800 153.18815 -0.00084500 0.00046200 1.00000000 48.23975 43 'helical symmetry operation' ? ? -0.33528700 -0.94211600 0.00002600 473.24369 0.94211600 -0.33528700 0.00088900 81.56224 -0.00082900 0.00032300 1.00000000 51.27538 44 'helical symmetry operation' ? ? -0.08472200 -0.99640500 0.00012600 432.43631 0.99640400 -0.08472200 0.00079200 18.23046 -0.00077900 0.00019300 1.00000000 54.30173 45 'helical symmetry operation' ? ? 0.17141300 -0.98519900 0.00019800 376.86631 0.98519900 0.17141300 0.00067200 -32.64431 -0.00069600 0.00008000 1.00000000 57.31815 46 'helical symmetry operation' ? ? 0.41628000 -0.90923600 0.00023700 310.18683 0.90923600 0.41628000 0.00053800 -67.71770 -0.00058800 -0.00000800 1.00000000 60.32394 47 'helical symmetry operation' ? ? 0.63378600 -0.77350900 0.00024100 236.78035 0.77350900 0.63378600 0.00039900 -84.68488 -0.00046100 -0.00006600 1.00000000 63.31962 48 'helical symmetry operation' ? ? 0.80963200 -0.58693800 0.00020900 161.47205 0.58693800 0.80963200 0.00026300 -82.42951 -0.00032400 -0.00009000 1.00000000 66.30603 49 'helical symmetry operation' ? ? 0.93226100 -0.36178700 0.00014400 89.21168 0.36178700 0.93226100 0.00014000 -61.10017 -0.00018500 -0.00007800 1.00000000 69.28464 50 'helical symmetry operation' ? ? 0.99361100 -0.11285600 0.00004900 24.74921 0.11285600 0.99361100 0.00003700 -22.09883 -0.00005300 -0.00003100 1.00000000 72.25743 51 'helical symmetry operation' ? ? 0.98965100 0.14349300 -0.00006800 -27.67841 -0.14349300 0.98965100 -0.00003800 32.01099 0.00006200 0.00004800 1.00000000 75.22719 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 4 ? ALA A 9 ? HIS A 22 ALA A 27 1 ? 6 HELX_P HELX_P2 AA2 LEU A 31 ? GLY A 45 ? LEU A 49 GLY A 63 1 ? 15 HELX_P HELX_P3 AA3 SER A 51 ? TYR A 65 ? SER A 69 TYR A 83 1 ? 15 HELX_P HELX_P4 AA4 ASP A 68 ? LEU A 73 ? ASP A 86 LEU A 91 1 ? 6 HELX_P HELX_P5 AA5 GLY A 76 ? GLU A 82 ? GLY A 94 GLU A 100 1 ? 7 HELX_P HELX_P6 AA6 ARG A 98 ? LEU A 103 ? ARG A 116 LEU A 121 1 ? 6 HELX_P HELX_P7 AA7 VAL A 106 ? SER A 108 ? VAL A 124 SER A 126 5 ? 3 HELX_P HELX_P8 AA8 GLY A 109 ? ALA A 118 ? GLY A 127 ALA A 136 1 ? 10 HELX_P HELX_P9 AA9 ASN A 128 ? LEU A 138 ? ASN A 146 LEU A 156 1 ? 11 HELX_P HELX_P10 AB1 GLY A 146 ? GLN A 164 ? GLY A 164 GLN A 182 1 ? 19 HELX_P HELX_P11 AB2 PRO A 170 ? GLN A 174 ? PRO A 188 GLN A 192 5 ? 5 HELX_P HELX_P12 AB3 SER A 175 ? ASN A 189 ? SER A 193 ASN A 207 1 ? 15 HELX_P HELX_P13 AB4 PHE A 190 ? MET A 203 ? PHE A 208 MET A 221 1 ? 14 HELX_P HELX_P14 AB5 ASP A 208 ? ALA A 221 ? ASP A 226 ALA A 239 1 ? 14 HELX_P HELX_P15 AB6 LEU A 226 ? ILE A 236 ? LEU A 244 ILE A 254 1 ? 11 HELX_P HELX_P16 AB7 ALA A 253 ? LYS A 271 ? ALA A 271 LYS A 289 1 ? 19 HELX_P HELX_P17 AB8 TYR A 275 ? PRO A 277 ? TYR A 293 PRO A 295 5 ? 3 HELX_P HELX_P18 AB9 PHE A 278 ? ASN A 283 ? PHE A 296 ASN A 301 1 ? 6 HELX_P HELX_P19 AC1 LEU A 284 ? ASN A 288 ? LEU A 302 ASN A 306 5 ? 5 HELX_P HELX_P20 AC2 PHE A 295 ? GLY A 310 ? PHE A 313 GLY A 328 1 ? 16 HELX_P HELX_P21 AC3 THR A 312 ? VAL A 316 ? THR A 330 VAL A 334 5 ? 5 HELX_P HELX_P22 AC4 TYR A 322 ? LEU A 348 ? TYR A 340 LEU A 366 1 ? 27 HELX_P HELX_P23 AC5 ASP A 351 ? THR A 388 ? ASP A 369 THR A 406 1 ? 38 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 21 ? GLN A 27 ? ARG A 39 GLN A 45 AA1 2 PHE A 86 ? LYS A 92 ? PHE A 104 LYS A 110 AA2 1 LEU A 237 ? LYS A 239 ? LEU A 255 LYS A 257 AA2 2 VAL A 244 ? LEU A 246 ? VAL A 262 LEU A 264 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 25 ? N VAL A 43 O LYS A 91 ? O LYS A 109 AA2 1 2 N GLN A 238 ? N GLN A 256 O ARG A 245 ? O ARG A 263 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N3 R U 2 ? ? C2 R U 2 ? ? O2 R U 2 ? ? 117.88 122.20 -4.32 0.70 N 2 1 C2 R U 2 ? ? N1 R U 2 ? ? "C1'" R U 2 ? ? 124.97 117.70 7.27 1.20 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 37 ? ? -92.34 -62.53 2 1 LEU A 49 ? ? -130.44 -36.14 3 1 GLU A 139 ? ? -95.91 34.44 4 1 ALA A 239 ? ? -95.85 35.07 5 1 LEU A 255 ? ? -117.40 53.08 6 1 LEU A 302 ? ? -79.67 -165.47 7 1 VAL A 336 ? ? -121.19 -62.26 # _pdbx_helical_symmetry.entry_id 5Z9W _pdbx_helical_symmetry.number_of_operations 51 _pdbx_helical_symmetry.rotation_per_n_subunits . _pdbx_helical_symmetry.rise_per_n_subunits . _pdbx_helical_symmetry.n_subunits_divisor . _pdbx_helical_symmetry.dyad_axis . _pdbx_helical_symmetry.circular_symmetry . # _em_3d_fitting.entry_id 5Z9W _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'AB INITIO MODEL' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 5Z9W _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages 3 _em_3d_reconstruction.num_particles 117552 _em_3d_reconstruction.resolution 3.6 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.euler_angles_details ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.8 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Ebolavirus nucleoprotein RNA complex (biological assembly)' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list '1, 2' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 5Z9W _em_image_scans.id 1 _em_image_scans.dimension_height 7420 _em_image_scans.dimension_width 7676 _em_image_scans.frames_per_image 75 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size 5 _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image 1-75 _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 5Z9W _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter 50 _em_imaging.calibrated_defocus_max 4000 _em_imaging.calibrated_defocus_min 800 _em_imaging.calibrated_magnification 47619 _em_imaging.cryogen NITROGEN _em_imaging.details 'nanoprobe, parallel beam illumination' _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max 4000 _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_magnification 105000 _em_imaging.recording_temperature_maximum 100 _em_imaging.recording_temperature_minimum 77 _em_imaging.residual_tilt 0.1 _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'Gatan Solarus' _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 400 _em_sample_support.grid_type 'C-flat-1.2/1.3 4C' _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.citation_id ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 289 _em_vitrification.cryogen_name ETHANE _em_vitrification.details '3 second blot, 2.5uL' _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 5Z9W _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 5Z9W _em_experiment.id 1 _em_experiment.aggregation_state 'HELICAL ARRAY' _em_experiment.reconstruction_method HELICAL _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 U OP3 O N N 369 U P P N N 370 U OP1 O N N 371 U OP2 O N N 372 U "O5'" O N N 373 U "C5'" C N N 374 U "C4'" C N R 375 U "O4'" O N N 376 U "C3'" C N S 377 U "O3'" O N N 378 U "C2'" C N R 379 U "O2'" O N N 380 U "C1'" C N R 381 U N1 N N N 382 U C2 C N N 383 U O2 O N N 384 U N3 N N N 385 U C4 C N N 386 U O4 O N N 387 U C5 C N N 388 U C6 C N N 389 U HOP3 H N N 390 U HOP2 H N N 391 U "H5'" H N N 392 U "H5''" H N N 393 U "H4'" H N N 394 U "H3'" H N N 395 U "HO3'" H N N 396 U "H2'" H N N 397 U "HO2'" H N N 398 U "H1'" H N N 399 U H3 H N N 400 U H5 H N N 401 U H6 H N N 402 VAL N N N N 403 VAL CA C N S 404 VAL C C N N 405 VAL O O N N 406 VAL CB C N N 407 VAL CG1 C N N 408 VAL CG2 C N N 409 VAL OXT O N N 410 VAL H H N N 411 VAL H2 H N N 412 VAL HA H N N 413 VAL HB H N N 414 VAL HG11 H N N 415 VAL HG12 H N N 416 VAL HG13 H N N 417 VAL HG21 H N N 418 VAL HG22 H N N 419 VAL HG23 H N N 420 VAL HXT H N N 421 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 U OP3 P sing N N 356 U OP3 HOP3 sing N N 357 U P OP1 doub N N 358 U P OP2 sing N N 359 U P "O5'" sing N N 360 U OP2 HOP2 sing N N 361 U "O5'" "C5'" sing N N 362 U "C5'" "C4'" sing N N 363 U "C5'" "H5'" sing N N 364 U "C5'" "H5''" sing N N 365 U "C4'" "O4'" sing N N 366 U "C4'" "C3'" sing N N 367 U "C4'" "H4'" sing N N 368 U "O4'" "C1'" sing N N 369 U "C3'" "O3'" sing N N 370 U "C3'" "C2'" sing N N 371 U "C3'" "H3'" sing N N 372 U "O3'" "HO3'" sing N N 373 U "C2'" "O2'" sing N N 374 U "C2'" "C1'" sing N N 375 U "C2'" "H2'" sing N N 376 U "O2'" "HO2'" sing N N 377 U "C1'" N1 sing N N 378 U "C1'" "H1'" sing N N 379 U N1 C2 sing N N 380 U N1 C6 sing N N 381 U C2 O2 doub N N 382 U C2 N3 sing N N 383 U N3 C4 sing N N 384 U N3 H3 sing N N 385 U C4 O4 doub N N 386 U C4 C5 sing N N 387 U C5 C6 doub N N 388 U C5 H5 sing N N 389 U C6 H6 sing N N 390 VAL N CA sing N N 391 VAL N H sing N N 392 VAL N H2 sing N N 393 VAL CA C sing N N 394 VAL CA CB sing N N 395 VAL CA HA sing N N 396 VAL C O doub N N 397 VAL C OXT sing N N 398 VAL CB CG1 sing N N 399 VAL CB CG2 sing N N 400 VAL CB HB sing N N 401 VAL CG1 HG11 sing N N 402 VAL CG1 HG12 sing N N 403 VAL CG1 HG13 sing N N 404 VAL CG2 HG21 sing N N 405 VAL CG2 HG22 sing N N 406 VAL CG2 HG23 sing N N 407 VAL OXT HXT sing N N 408 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 10 mM C4H12ClNO3 Tris-HCl 1 2 150 mM NaCl 'sodium chloride' 1 3 1 mM C10H12O8CaN2Na2x2H2O EDTA # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details 'deconvolution in RELION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.166 # _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 128952 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Ebola virus - Mayinga, Zaire, 1976' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 1 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell HEK293T _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.angular_rotation_per_subunit -14.73 _em_helical_entity.axial_rise_per_subunit 3.01 _em_helical_entity.axial_symmetry C1 _em_helical_entity.details ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details 'frame alignment and integration with motioncor2 incl. dose weighting and 2x Fourier cropping' # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 105 _em_image_recording.average_exposure_time 15 _em_image_recording.details 'frame alignment and dose weighting using motioncor2' _em_image_recording.detector_mode SUPER-RESOLUTION _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 2467 # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name 'GIF Quantum LS' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width ? _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details ? _em_particle_selection.method ? _em_particle_selection.num_particles_selected 232490 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' e2helixboxer.py EMAN2 2.1 1 ? ? 2 'IMAGE ACQUISITION' ? Leginon 3.2 ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? CTFFIND 4.1 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? Coot 0.8.7 ? 1 ? 8 OTHER ? ? ? ? ? ? 9 'INITIAL EULER ASSIGNMENT' ? RELION 2.1 1 ? ? 10 'FINAL EULER ASSIGNMENT' ? RELION 2.1 1 ? ? 11 CLASSIFICATION ? RELION 2.1 1 ? ? 12 RECONSTRUCTION ? RELION 2.1 1 ? ? 13 'MODEL REFINEMENT' phenix.real_space_refine PHENIX 1.13rc2-2981 ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 0.3 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'the Ministry of Education, Culture, Science, Sports, and Technology' Japan 26892028 1 'Japan Science and Technology Agency' Japan JPMJPR13L9 2 'Japan Agency for Medical Research and Development' Japan 17fk0108128h0001 3 'the Ministry of Education, Culture, Science, Sports, and Technology' Japan 16H06429 4 'the Ministry of Education, Culture, Science, Sports, and Technology' Japan 16K21723 5 'the Ministry of Education, Culture, Science, Sports, and Technology' Japan 16H06434 6 'Japan Society for the Promotion of Science' Japan ? 7 'Daiichi Sankyo Foundation of Life Science' Japan ? 8 'Japan Agency for Medical Research and Development' Japan ? 9 # _atom_sites.entry_id 5Z9W _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_