HEADER CELL ADHESION 09-FEB-18 5ZAZ TITLE SOLUTION STRUCTURE OF INTEGRIN B2 MONOMER TRANMEMBRANE DOMAIN IN TITLE 2 BICELLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRIN BETA-2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CELL SURFACE ADHESION GLYCOPROTEINS LFA-1/CR3/P150,95 COMPND 5 SUBUNIT BETA,COMPLEMENT RECEPTOR C3 SUBUNIT BETA; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ITGB2, CD18, MFI7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_COMMON: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS INTEGRIN B2, PROTEIN-LIPID INTERACTION, PHOSPHOLIPIDS, CA2+, CELL KEYWDS 2 ADHESION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.LI,J.GUO,C.XU REVDAT 4 15-MAY-24 5ZAZ 1 REMARK REVDAT 3 14-JUN-23 5ZAZ 1 REMARK REVDAT 2 28-NOV-18 5ZAZ 1 JRNL REVDAT 1 17-OCT-18 5ZAZ 0 JRNL AUTH J.GUO,Y.ZHANG,H.LI,H.CHU,Q.WANG,S.JIANG,Y.LI,H.SHEN,G.LI, JRNL AUTH 2 J.CHEN,C.XU JRNL TITL INTRAMEMBRANE IONIC PROTEIN-LIPID INTERACTION REGULATES JRNL TITL 2 INTEGRIN STRUCTURE AND FUNCTION. JRNL REF PLOS BIOL. V. 16 06525 2018 JRNL REFN ESSN 1545-7885 JRNL PMID 30427828 JRNL DOI 10.1371/JOURNAL.PBIO.2006525 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZAZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1300006774. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.7 REMARK 210 IONIC STRENGTH : 20 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.6 MM [U-13C; U-15N] INTEGRIN REMARK 210 B2, 20 MM BIS-TRIS, 240 MM DHPC, REMARK 210 48 MM POPC, 24 MM POPG, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D HNCA; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HNCO; 2D 1H-15N REMARK 210 HSQC; 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, KUJIRA, NMRPIPE, TOPSPIN, REMARK 210 NMRVIEW REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 695 51.03 -163.82 REMARK 500 1 ALA A 697 -57.69 -175.75 REMARK 500 1 PRO A 699 -167.09 -69.78 REMARK 500 1 ASN A 700 -168.33 -60.44 REMARK 500 1 TYR A 735 171.14 -57.26 REMARK 500 2 GLU A 691 41.11 -98.78 REMARK 500 2 ALA A 697 -54.64 -155.74 REMARK 500 2 PRO A 699 -167.07 -69.77 REMARK 500 2 ASN A 700 -168.27 -60.46 REMARK 500 2 TYR A 735 172.59 -56.51 REMARK 500 2 ARG A 736 43.51 -105.26 REMARK 500 3 GLU A 694 174.21 59.73 REMARK 500 3 SER A 695 63.15 -175.44 REMARK 500 3 ALA A 697 26.94 -144.36 REMARK 500 3 PRO A 699 -166.96 -69.78 REMARK 500 3 ASN A 700 -168.13 -60.54 REMARK 500 3 ARG A 736 35.50 -98.09 REMARK 500 4 ASP A 690 -51.03 -125.45 REMARK 500 4 GLU A 694 176.11 59.26 REMARK 500 4 SER A 695 65.43 -167.09 REMARK 500 4 ALA A 697 -45.17 -172.28 REMARK 500 4 PRO A 699 -165.56 -69.73 REMARK 500 4 ASN A 700 -166.97 -60.74 REMARK 500 4 ARG A 736 45.70 -94.16 REMARK 500 5 ASP A 690 -73.70 -152.67 REMARK 500 5 GLU A 691 50.54 -111.31 REMARK 500 5 ALA A 697 -64.96 -157.40 REMARK 500 5 PRO A 699 -167.08 -69.79 REMARK 500 5 ASN A 700 -168.27 -60.46 REMARK 500 6 ASP A 690 -69.47 72.10 REMARK 500 6 GLU A 691 -169.87 51.84 REMARK 500 6 SER A 692 177.75 61.36 REMARK 500 6 SER A 695 59.57 -151.72 REMARK 500 6 ALA A 697 -63.12 -155.96 REMARK 500 6 PRO A 699 -170.97 -69.78 REMARK 500 6 ARG A 736 40.11 -103.56 REMARK 500 7 SER A 695 82.36 -178.19 REMARK 500 7 ALA A 697 -64.87 -150.04 REMARK 500 7 PRO A 699 -174.64 -69.70 REMARK 500 7 ASN A 700 -175.87 -65.94 REMARK 500 8 GLU A 694 176.43 59.17 REMARK 500 8 SER A 695 50.04 -147.62 REMARK 500 8 ALA A 697 -58.36 -171.91 REMARK 500 8 PRO A 699 -167.04 -69.77 REMARK 500 8 ASN A 700 -168.28 -60.37 REMARK 500 8 ARG A 736 46.03 -92.69 REMARK 500 9 ASP A 690 -169.04 50.83 REMARK 500 9 SER A 695 63.58 -175.84 REMARK 500 9 ALA A 697 -55.00 -173.79 REMARK 500 9 PRO A 699 -165.61 -69.72 REMARK 500 REMARK 500 THIS ENTRY HAS 117 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36165 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF INTEGRIN B2 MONOMER TRANMEMBRANE DOMAIN IN REMARK 900 BICELLE DBREF 5ZAZ A 689 739 UNP P05107 ITB2_HUMAN 689 739 SEQADV 5ZAZ PRO A 688 UNP P05107 EXPRESSION TAG SEQADV 5ZAZ SER A 695 UNP P05107 CYS 695 ENGINEERED MUTATION SEQRES 1 A 52 PRO VAL ASP GLU SER ARG GLU SER VAL ALA GLY PRO ASN SEQRES 2 A 52 ILE ALA ALA ILE VAL GLY GLY THR VAL ALA GLY ILE VAL SEQRES 3 A 52 LEU ILE GLY ILE LEU LEU LEU VAL ILE TRP LYS ALA LEU SEQRES 4 A 52 ILE HIS LEU SER ASP LEU ARG GLU TYR ARG ARG PHE GLU HELIX 1 AA1 ILE A 701 TYR A 735 1 35 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1