HEADER OXIDOREDUCTASE 23-FEB-18 5ZD6 OBSLTE 21-NOV-18 5ZD6 6IQZ TITLE HIGH RESOLUTION STRUCTURE OF BILIRUBIN OXIDASE FROM MYROTHECIUM TITLE 2 VERRUCARIA - WILD TYPE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BILIRUBIN OXIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.3.3.5; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYROTHECIUM VERRUCARIA; SOURCE 3 ORGANISM_COMMON: MYROTHECIUM LEAF SPOT AND POD BLIGHT FUNGUS; SOURCE 4 ORGANISM_TAXID: 1859699; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS MULTICOPPER OXYDASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR N.SHIBATA,M.AKTER,Y.HIGUCHI REVDAT 2 21-NOV-18 5ZD6 1 OBSLTE REVDAT 1 19-SEP-18 5ZD6 0 JRNL AUTH M.AKTER,T.TOKIWA,M.SHOJI,K.NISHIKAWA,Y.SHIGETA,T.SAKURAI, JRNL AUTH 2 Y.HIGUCHI,K.KATAOKA,N.SHIBATA JRNL TITL REDOX POTENTIAL-DEPENDENT FORMATION OF AN UNUSUAL HIS-TRP JRNL TITL 2 BOND IN BILIRUBIN OXIDASE. JRNL REF CHEMISTRY 2018 JRNL REFN ISSN 1521-3765 JRNL PMID 30156345 JRNL DOI 10.1002/CHEM.201803798 REMARK 2 REMARK 2 RESOLUTION. 1.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 102509 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.950 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZD6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1300006874. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102516 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.460 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.69100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.760 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2XLL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE PH 5.0, 20% (W/V) REMARK 280 PEG 8000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 69.17100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.77650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 69.17100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.77650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1140 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -37 REMARK 465 PHE A -36 REMARK 465 LYS A -35 REMARK 465 HIS A -34 REMARK 465 THR A -33 REMARK 465 LEU A -32 REMARK 465 GLY A -31 REMARK 465 ALA A -30 REMARK 465 ALA A -29 REMARK 465 ALA A -28 REMARK 465 LEU A -27 REMARK 465 SER A -26 REMARK 465 LEU A -25 REMARK 465 LEU A -24 REMARK 465 PHE A -23 REMARK 465 ASN A -22 REMARK 465 SER A -21 REMARK 465 ASN A -20 REMARK 465 ALA A -19 REMARK 465 VAL A -18 REMARK 465 GLN A -17 REMARK 465 ALA A -16 REMARK 465 SER A -15 REMARK 465 PRO A -14 REMARK 465 VAL A -13 REMARK 465 PRO A -12 REMARK 465 GLU A -11 REMARK 465 THR A -10 REMARK 465 SER A -9 REMARK 465 PRO A -8 REMARK 465 ALA A -7 REMARK 465 THR A -6 REMARK 465 GLY A -5 REMARK 465 HIS A -4 REMARK 465 LEU A -3 REMARK 465 PHE A -2 REMARK 465 GLU A 534 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD1 TRP A 396 NE2 HIS A 398 1.40 REMARK 500 NE2 HIS A 401 CU CU A 604 1.60 REMARK 500 NE2 HIS A 94 CU CU A 604 1.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 54 -164.99 -123.46 REMARK 500 ALA A 87 -154.00 -116.81 REMARK 500 HIS A 136 19.35 -143.71 REMARK 500 HIS A 139 -1.09 67.24 REMARK 500 GLU A 171 -75.67 -107.06 REMARK 500 ASN A 197 -65.88 -102.97 REMARK 500 TRP A 211 66.57 31.45 REMARK 500 SER A 255 -165.54 -117.69 REMARK 500 SER A 255 -148.86 -112.31 REMARK 500 ALA A 274 -5.52 82.00 REMARK 500 LEU A 404 -51.43 68.26 REMARK 500 THR A 420 -139.13 -124.95 REMARK 500 HIS A 465 56.89 -145.10 REMARK 500 ASP A 466 53.35 -157.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1235 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A1236 DISTANCE = 6.06 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 602 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 96 ND1 REMARK 620 2 HIS A 134 NE2 137.9 REMARK 620 3 HIS A 458 NE2 112.9 106.9 REMARK 620 4 HOH A1096 O 103.1 98.5 76.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 603 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 136 NE2 REMARK 620 2 HIS A 403 NE2 129.6 REMARK 620 3 HIS A 456 NE2 105.9 114.9 REMARK 620 4 HOH A1096 O 93.0 111.6 93.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 601 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 398 ND1 REMARK 620 2 CYS A 457 SG 130.2 REMARK 620 3 HIS A 462 ND1 100.7 127.5 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Poly-Saccharide residues NAG A REMARK 800 605 through MAN A 607 bound to ASN A 472 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Mono-Saccharide NAG A 608 bound REMARK 800 to ASN A 482 DBREF 5ZD6 A -37 534 UNP Q12737 BLRO_MYRVE 1 572 SEQRES 1 A 572 MET PHE LYS HIS THR LEU GLY ALA ALA ALA LEU SER LEU SEQRES 2 A 572 LEU PHE ASN SER ASN ALA VAL GLN ALA SER PRO VAL PRO SEQRES 3 A 572 GLU THR SER PRO ALA THR GLY HIS LEU PHE LYS ARG VAL SEQRES 4 A 572 ALA GLN ILE SER PRO GLN TYR PRO MET PHE THR VAL PRO SEQRES 5 A 572 LEU PRO ILE PRO PRO VAL LYS GLN PRO ARG LEU THR VAL SEQRES 6 A 572 THR ASN PRO VAL ASN GLY GLN GLU ILE TRP TYR TYR GLU SEQRES 7 A 572 VAL GLU ILE LYS PRO PHE THR HIS GLN VAL TYR PRO ASP SEQRES 8 A 572 LEU GLY SER ALA ASP LEU VAL GLY TYR ASP GLY MET SER SEQRES 9 A 572 PRO GLY PRO THR PHE GLN VAL PRO ARG GLY VAL GLU THR SEQRES 10 A 572 VAL VAL ARG PHE ILE ASN ASN ALA GLU ALA PRO ASN SER SEQRES 11 A 572 VAL HIS LEU HIS GLY SER PHE SER ARG ALA ALA PHE ASP SEQRES 12 A 572 GLY TRP ALA GLU ASP ILE THR GLU PRO GLY SER PHE LYS SEQRES 13 A 572 ASP TYR TYR TYR PRO ASN ARG GLN SER ALA ARG THR LEU SEQRES 14 A 572 TRP TYR HIS ASP HIS ALA MET HIS ILE THR ALA GLU ASN SEQRES 15 A 572 ALA TYR ARG GLY GLN ALA GLY LEU TYR MET LEU THR ASP SEQRES 16 A 572 PRO ALA GLU ASP ALA LEU ASN LEU PRO SER GLY TYR GLY SEQRES 17 A 572 GLU PHE ASP ILE PRO MET ILE LEU THR SER LYS GLN TYR SEQRES 18 A 572 THR ALA ASN GLY ASN LEU VAL THR THR ASN GLY GLU LEU SEQRES 19 A 572 ASN SER PHE TRP GLY ASP VAL ILE HIS VAL ASN GLY GLN SEQRES 20 A 572 PRO TRP PRO PHE LYS ASN VAL GLU PRO ARG LYS TYR ARG SEQRES 21 A 572 PHE ARG PHE LEU ASP ALA ALA VAL SER ARG SER PHE GLY SEQRES 22 A 572 LEU TYR PHE ALA ASP THR ASP ALA ILE ASP THR ARG LEU SEQRES 23 A 572 PRO PHE LYS VAL ILE ALA SER ASP SER GLY LEU LEU GLU SEQRES 24 A 572 HIS PRO ALA ASP THR SER LEU LEU TYR ILE SER MET ALA SEQRES 25 A 572 GLU ARG TYR GLU VAL VAL PHE ASP PHE SER ASP TYR ALA SEQRES 26 A 572 GLY LYS THR ILE GLU LEU ARG ASN LEU GLY GLY SER ILE SEQRES 27 A 572 GLY GLY ILE GLY THR ASP THR ASP TYR ASP ASN THR ASP SEQRES 28 A 572 LYS VAL MET ARG PHE VAL VAL ALA ASP ASP THR THR GLN SEQRES 29 A 572 PRO ASP THR SER VAL VAL PRO ALA ASN LEU ARG ASP VAL SEQRES 30 A 572 PRO PHE PRO SER PRO THR THR ASN THR PRO ARG GLN PHE SEQRES 31 A 572 ARG PHE GLY ARG THR GLY PRO THR TRP THR ILE ASN GLY SEQRES 32 A 572 VAL ALA PHE ALA ASP VAL GLN ASN ARG LEU LEU ALA ASN SEQRES 33 A 572 VAL PRO VAL GLY THR VAL GLU ARG TRP GLU LEU ILE ASN SEQRES 34 A 572 ALA GLY ASN GLY TRP THR HIS PRO ILE HIS ILE HIS LEU SEQRES 35 A 572 VAL ASP PHE LYS VAL ILE SER ARG THR SER GLY ASN ASN SEQRES 36 A 572 ALA ARG THR VAL MET PRO TYR GLU SER GLY LEU LYS ASP SEQRES 37 A 572 VAL VAL TRP LEU GLY ARG ARG GLU THR VAL VAL VAL GLU SEQRES 38 A 572 ALA HIS TYR ALA PRO PHE PRO GLY VAL TYR MET PHE HIS SEQRES 39 A 572 CYS HIS ASN LEU ILE HIS GLU ASP HIS ASP MET MET ALA SEQRES 40 A 572 ALA PHE ASN ALA THR VAL LEU PRO ASP TYR GLY TYR ASN SEQRES 41 A 572 ALA THR VAL PHE VAL ASP PRO MET GLU GLU LEU TRP GLN SEQRES 42 A 572 ALA ARG PRO TYR GLU LEU GLY GLU PHE GLN ALA GLN SER SEQRES 43 A 572 GLY GLN PHE SER VAL GLN ALA VAL THR GLU ARG ILE GLN SEQRES 44 A 572 THR MET ALA GLU TYR ARG PRO TYR ALA ALA ALA ASP GLU HET CU A 601 1 HET CU A 602 1 HET CU A 603 1 HET CU A 604 1 HET NAG A 605 14 HET NAG A 606 14 HET MAN A 607 11 HET NAG A 608 14 HET GOL A 609 6 HET GOL A 610 6 HETNAM CU COPPER (II) ION HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM MAN ALPHA-D-MANNOSE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CU 4(CU 2+) FORMUL 6 NAG 3(C8 H15 N O6) FORMUL 6 MAN C6 H12 O6 FORMUL 8 GOL 2(C3 H8 O3) FORMUL 10 HOH *536(H2 O) HELIX 1 AA1 ARG A 101 ASP A 105 5 5 HELIX 2 AA2 ILE A 140 ARG A 147 1 8 HELIX 3 AA3 ASP A 157 ALA A 162 1 6 HELIX 4 AA4 SER A 284 ALA A 287 5 4 HELIX 5 AA5 LEU A 296 GLY A 302 1 7 HELIX 6 AA6 MET A 422 SER A 426 5 5 HELIX 7 AA7 ASN A 459 HIS A 465 1 7 HELIX 8 AA8 ASN A 482 PHE A 486 5 5 HELIX 9 AA9 GLU A 491 GLN A 495 5 5 HELIX 10 AB1 GLU A 500 GLN A 507 1 8 HELIX 11 AB2 SER A 508 PHE A 511 5 4 HELIX 12 AB3 SER A 512 TYR A 526 1 15 HELIX 13 AB4 TYR A 529 ASP A 533 5 5 SHEET 1 AA1 3 LEU A 25 THR A 28 0 SHEET 2 AA1 3 GLU A 35 HIS A 48 -1 O ILE A 36 N VAL A 27 SHEET 3 AA1 3 ALA A 57 TYR A 62 -1 O ALA A 57 N HIS A 48 SHEET 1 AA2 5 LEU A 25 THR A 28 0 SHEET 2 AA2 5 GLU A 35 HIS A 48 -1 O ILE A 36 N VAL A 27 SHEET 3 AA2 5 THR A 79 ASN A 85 1 O ILE A 84 N VAL A 41 SHEET 4 AA2 5 SER A 116 TYR A 122 -1 O TYR A 122 N THR A 79 SHEET 5 AA2 5 ARG A 497 PRO A 498 -1 O ARG A 497 N PHE A 117 SHEET 1 AA3 4 GLY A 68 PRO A 74 0 SHEET 2 AA3 4 ALA A 150 THR A 156 1 O MET A 154 N PHE A 71 SHEET 3 AA3 4 ARG A 129 ASP A 135 -1 N LEU A 131 O TYR A 153 SHEET 4 AA3 4 VAL A 93 HIS A 96 -1 N HIS A 94 O HIS A 134 SHEET 1 AA4 7 GLN A 209 PRO A 210 0 SHEET 2 AA4 7 VAL A 203 VAL A 206 -1 N VAL A 206 O GLN A 209 SHEET 3 AA4 7 ASP A 173 LYS A 181 -1 N THR A 179 O HIS A 205 SHEET 4 AA4 7 LYS A 220 ASP A 227 1 O ARG A 222 N ILE A 174 SHEET 5 AA4 7 ARG A 276 ASP A 282 -1 O VAL A 279 N PHE A 223 SHEET 6 AA4 7 PHE A 250 SER A 255 -1 N ILE A 253 O GLU A 278 SHEET 7 AA4 7 GLY A 258 THR A 266 -1 O THR A 266 N PHE A 250 SHEET 1 AA5 5 PHE A 213 VAL A 216 0 SHEET 2 AA5 5 LYS A 314 VAL A 320 1 O VAL A 319 N VAL A 216 SHEET 3 AA5 5 THR A 290 ASN A 295 -1 N ILE A 291 O PHE A 318 SHEET 4 AA5 5 PHE A 234 ASP A 240 -1 N TYR A 237 O ARG A 294 SHEET 5 AA5 5 LEU A 269 ILE A 271 -1 O ILE A 271 N PHE A 234 SHEET 1 AA6 5 THR A 360 ILE A 363 0 SHEET 2 AA6 5 ARG A 350 THR A 357 -1 N THR A 357 O THR A 360 SHEET 3 AA6 5 VAL A 384 ILE A 390 1 O ILE A 390 N PHE A 352 SHEET 4 AA6 5 GLU A 438 HIS A 445 -1 O VAL A 440 N LEU A 389 SHEET 5 AA6 5 PHE A 407 SER A 414 -1 N ILE A 410 O VAL A 441 SHEET 1 AA7 5 LEU A 375 PRO A 380 0 SHEET 2 AA7 5 MET A 468 THR A 474 1 O ASN A 472 N VAL A 379 SHEET 3 AA7 5 GLY A 451 CYS A 457 -1 N PHE A 455 O ALA A 469 SHEET 4 AA7 5 HIS A 398 ILE A 402 -1 N HIS A 401 O HIS A 456 SHEET 5 AA7 5 VAL A 431 LEU A 434 -1 O VAL A 432 N ILE A 400 LINK ND1 HIS A 96 CU CU A 602 1555 1555 2.01 LINK NE2 HIS A 134 CU CU A 602 1555 1555 1.99 LINK NE2 HIS A 136 CU CU A 603 1555 1555 2.05 LINK ND1 HIS A 398 CU CU A 601 1555 1555 2.07 LINK NE2 HIS A 403 CU CU A 603 1555 1555 2.00 LINK NE2 HIS A 456 CU CU A 603 1555 1555 1.91 LINK SG CYS A 457 CU CU A 601 1555 1555 2.16 LINK NE2 HIS A 458 CU CU A 602 1555 1555 2.22 LINK ND1 HIS A 462 CU CU A 601 1555 1555 2.05 LINK ND2 ASN A 472 C1 NAG A 605 1555 1555 1.44 LINK ND2 ASN A 482 C1 NAG A 608 1555 1555 1.44 LINK CU CU A 602 O HOH A1096 1555 1555 2.69 LINK CU CU A 603 O HOH A1096 1555 1555 2.29 LINK O4 NAG A 605 C1 NAG A 606 1555 1555 1.43 LINK O4 NAG A 606 C1 MAN A 607 1555 1555 1.45 CISPEP 1 SER A 66 PRO A 67 0 -4.36 CISPEP 2 ALA A 447 PRO A 448 0 3.64 CISPEP 3 HIS A 465 ASP A 466 0 10.64 SITE 1 AC1 5 THR A 397 HIS A 398 CYS A 457 HIS A 462 SITE 2 AC1 5 MET A 467 SITE 1 AC2 5 HIS A 96 TRP A 132 HIS A 134 HIS A 458 SITE 2 AC2 5 HOH A1096 SITE 1 AC3 5 HIS A 136 HIS A 401 HIS A 403 HIS A 456 SITE 2 AC3 5 HOH A1096 SITE 1 AC4 4 HIS A 94 HIS A 96 HIS A 401 HIS A 403 SITE 1 AC5 9 GLN A 182 GLU A 195 PHE A 199 VAL A 513 SITE 2 AC5 9 GLN A 514 HOH A 704 HOH A 863 HOH A 948 SITE 3 AC5 9 HOH A1020 SITE 1 AC6 7 GLN A 34 GLY A 76 ARG A 125 ARG A 353 SITE 2 AC6 7 HOH A 902 HOH A1042 HOH A1072 SITE 1 AC7 13 LEU A 375 ASN A 472 THR A 474 VAL A 475 SITE 2 AC7 13 THR A 484 VAL A 487 HOH A 749 HOH A 847 SITE 3 AC7 13 HOH A 877 HOH A 955 HOH A 992 HOH A1012 SITE 4 AC7 13 HOH A1048 SITE 1 AC8 9 ASN A 482 GLU A 525 TYR A 526 ARG A 527 SITE 2 AC8 9 HOH A 811 HOH A 817 HOH A 838 HOH A 977 SITE 3 AC8 9 HOH A1055 CRYST1 138.342 83.553 52.690 90.00 95.73 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007228 0.000000 0.000725 0.00000 SCALE2 0.000000 0.011968 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019074 0.00000