HEADER HYDROLASE 23-FEB-18 5ZDB TITLE CRYSTAL STRUCTURE OF POLY(ADP-RIBOSE) GLYCOHYDROLASE (PARG) FROM TITLE 2 DEINOCOCCUS RADIODURANS IN COMPLEX WITH ADP-RIBOSE (P21) COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY ADP-RIBOSE GLYCOHYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS (STRAIN ATCC 13939 / SOURCE 3 DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / SOURCE 4 VKM B-1422); SOURCE 5 ORGANISM_TAXID: 243230; SOURCE 6 STRAIN: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / SOURCE 7 NCIMB 9279 / R1 / VKM B-1422; SOURCE 8 GENE: DR_B0099; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 11 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS ADP-RIBOSE, POLY(ADP-RIBOSE) GLYCOHYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.C.CHO,C.H.HSU REVDAT 3 22-NOV-23 5ZDB 1 REMARK REVDAT 2 11-MAR-20 5ZDB 1 JRNL HETSYN REVDAT 1 27-FEB-19 5ZDB 0 JRNL AUTH C.C.CHO,C.Y.CHIEN,Y.C.CHIU,M.H.LIN,C.H.HSU JRNL TITL STRUCTURAL AND BIOCHEMICAL EVIDENCE SUPPORTING POLY JRNL TITL 2 ADP-RIBOSYLATION IN THE BACTERIUM DEINOCOCCUS RADIODURANS. JRNL REF NAT COMMUN V. 10 1491 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 30940816 JRNL DOI 10.1038/S41467-019-09153-6 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 32431 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.180 REMARK 3 FREE R VALUE TEST SET COUNT : 2005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.9614 - 4.7446 1.00 2357 155 0.1565 0.1813 REMARK 3 2 4.7446 - 3.7696 0.99 2322 145 0.1325 0.1509 REMARK 3 3 3.7696 - 3.2942 1.00 2317 155 0.1381 0.1713 REMARK 3 4 3.2942 - 2.9935 1.00 2321 157 0.1516 0.1907 REMARK 3 5 2.9935 - 2.7792 0.99 2304 156 0.1530 0.2230 REMARK 3 6 2.7792 - 2.6155 0.99 2292 148 0.1549 0.1827 REMARK 3 7 2.6155 - 2.4846 1.00 2313 155 0.1583 0.2216 REMARK 3 8 2.4846 - 2.3765 0.99 2268 152 0.1719 0.2522 REMARK 3 9 2.3765 - 2.2851 0.99 2287 153 0.1684 0.2280 REMARK 3 10 2.2851 - 2.2063 0.98 2282 147 0.1733 0.2261 REMARK 3 11 2.2063 - 2.1373 0.92 2123 141 0.1845 0.2233 REMARK 3 12 2.1373 - 2.0763 0.85 1966 131 0.1931 0.2619 REMARK 3 13 2.0763 - 2.0216 0.75 1752 111 0.1833 0.2386 REMARK 3 14 2.0216 - 1.9723 0.67 1522 99 0.2103 0.3098 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4041 REMARK 3 ANGLE : 0.922 5509 REMARK 3 CHIRALITY : 0.055 603 REMARK 3 PLANARITY : 0.006 733 REMARK 3 DIHEDRAL : 7.759 2399 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 29:117 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1736 -15.5718 5.6304 REMARK 3 T TENSOR REMARK 3 T11: 0.1361 T22: 0.1171 REMARK 3 T33: 0.1380 T12: 0.0177 REMARK 3 T13: 0.0133 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 1.5216 L22: 1.9346 REMARK 3 L33: 2.1811 L12: -0.2224 REMARK 3 L13: 0.3642 L23: -0.1865 REMARK 3 S TENSOR REMARK 3 S11: -0.0477 S12: -0.1031 S13: 0.0058 REMARK 3 S21: 0.2464 S22: 0.0798 S23: -0.0371 REMARK 3 S31: -0.0019 S32: 0.0209 S33: -0.0301 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 118:231 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3853 -22.2744 4.0381 REMARK 3 T TENSOR REMARK 3 T11: 0.1318 T22: 0.0971 REMARK 3 T33: 0.1278 T12: 0.0048 REMARK 3 T13: -0.0117 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.5537 L22: 1.5650 REMARK 3 L33: 1.3792 L12: -0.3798 REMARK 3 L13: -0.1528 L23: 0.2391 REMARK 3 S TENSOR REMARK 3 S11: -0.0319 S12: -0.0372 S13: -0.0208 REMARK 3 S21: 0.2083 S22: 0.0468 S23: -0.0445 REMARK 3 S31: 0.1482 S32: 0.0141 S33: -0.0030 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 232:281 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.7756 -11.7046 -9.8132 REMARK 3 T TENSOR REMARK 3 T11: 0.1887 T22: 0.2273 REMARK 3 T33: 0.2001 T12: 0.0014 REMARK 3 T13: 0.0235 T23: 0.0318 REMARK 3 L TENSOR REMARK 3 L11: 2.2700 L22: 1.3319 REMARK 3 L33: 1.2493 L12: -0.2181 REMARK 3 L13: 0.0113 L23: 0.2829 REMARK 3 S TENSOR REMARK 3 S11: 0.0059 S12: 0.4684 S13: 0.3287 REMARK 3 S21: -0.3156 S22: 0.0493 S23: -0.1359 REMARK 3 S31: -0.1432 S32: 0.1188 S33: 0.0189 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 29:139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6756 -34.1705 38.1108 REMARK 3 T TENSOR REMARK 3 T11: 0.1596 T22: 0.1814 REMARK 3 T33: 0.1595 T12: 0.0051 REMARK 3 T13: 0.0133 T23: 0.0261 REMARK 3 L TENSOR REMARK 3 L11: 1.8252 L22: 2.4750 REMARK 3 L33: 2.7324 L12: 0.3631 REMARK 3 L13: -0.4945 L23: -0.1394 REMARK 3 S TENSOR REMARK 3 S11: -0.0979 S12: 0.0248 S13: -0.0507 REMARK 3 S21: -0.2144 S22: -0.0095 S23: -0.1195 REMARK 3 S31: 0.1297 S32: 0.0728 S33: 0.0834 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN B AND RESID 140:279 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1427 -34.0379 28.3745 REMARK 3 T TENSOR REMARK 3 T11: 0.2372 T22: 0.2319 REMARK 3 T33: 0.1503 T12: -0.0107 REMARK 3 T13: 0.0284 T23: -0.0197 REMARK 3 L TENSOR REMARK 3 L11: 1.3254 L22: 2.2671 REMARK 3 L33: 2.2345 L12: 0.0772 REMARK 3 L13: -0.1489 L23: -1.2623 REMARK 3 S TENSOR REMARK 3 S11: -0.0972 S12: 0.3479 S13: -0.1537 REMARK 3 S21: -0.4923 S22: 0.0016 S23: -0.1405 REMARK 3 S31: 0.2385 S32: -0.0756 S33: 0.0770 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZDB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1300005626. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13C1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97622 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33944 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.972 REMARK 200 RESOLUTION RANGE LOW (A) : 25.959 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.3530 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.50200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.019 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5ZDA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE PH 6.0, 10% 2-PROPANOL, 10% POLYETHYLENE GLYCOL 4000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.71350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU B 280 REMARK 465 PRO B 281 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 538 O HOH A 548 1.83 REMARK 500 O HOH A 501 O HOH A 514 1.93 REMARK 500 O HOH A 543 O HOH A 550 1.96 REMARK 500 O GLY B 100 O HOH B 401 1.98 REMARK 500 O HOH A 474 O HOH A 555 2.05 REMARK 500 O HOH A 546 O HOH A 559 2.05 REMARK 500 O CYS A 279 O HOH A 401 2.09 REMARK 500 NH1 ARG A 58 O HOH A 402 2.12 REMARK 500 O HOH A 508 O HOH A 530 2.13 REMARK 500 NH1 ARG B 229 O HOH B 402 2.14 REMARK 500 O HOH B 431 O HOH B 470 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 528 O HOH B 492 1454 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 144 -171.38 64.88 REMARK 500 ASP A 146 42.89 -88.89 REMARK 500 TYR B 144 -169.03 57.34 REMARK 500 ASP B 146 41.33 -87.63 REMARK 500 ASP B 260 95.51 -161.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AR6 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AR6 B 301 DBREF 5ZDB A 29 281 UNP Q9RZM4 Q9RZM4_DEIRA 29 281 DBREF 5ZDB B 29 281 UNP Q9RZM4 Q9RZM4_DEIRA 29 281 SEQRES 1 A 253 VAL ARG LEU PRO GLY LEU ALA ALA MET ARG GLN GLY THR SEQRES 2 A 253 ARG LEU PHE THR PRO GLU GLN GLY GLU ASP LEU ARG GLU SEQRES 3 A 253 ALA LEU ARG ARG ARG ARG GLY SER PHE GLN THR THR CYS SEQRES 4 A 253 GLU VAL THR SER GLU THR THR PHE ALA ALA ALA ARG ARG SEQRES 5 A 253 LEU ARG GLU LYS ALA SER ALA LEU ALA ALA LEU ASN PHE SEQRES 6 A 253 ALA SER ALA LYS ASN PRO GLY GLY GLY PHE LEU GLY GLY SEQRES 7 A 253 ALA GLN ALA GLN GLU GLU ASP LEU CYS ARG GLY SER GLY SEQRES 8 A 253 LEU TYR PHE SER LEU THR SER PRO GLN ALA GLU PRO TYR SEQRES 9 A 253 TYR ALA VAL ASN ARG GLN SER HIS SER ALA LEU TYR THR SEQRES 10 A 253 ASP HIS LEU ILE TYR SER PRO GLN VAL PRO ILE PHE ARG SEQRES 11 A 253 ASP ASP ALA GLY GLN LEU LEU PRO ALA PRO VAL PRO VAL SEQRES 12 A 253 ASN ILE ILE THR ALA PRO ALA PRO ASN ALA GLY ALA VAL SEQRES 13 A 253 ALA GLN SER ARG PRO GLU GLN LEU PRO GLN VAL LEU PRO SEQRES 14 A 253 THR LEU ARG GLU ARG ALA ARG ARG VAL LEU GLY VAL ALA SEQRES 15 A 253 ALA TRP MET GLU GLN THR HIS LEU VAL LEU GLY ALA TRP SEQRES 16 A 253 GLY CYS GLY VAL PHE ARG ASN ASP PRO ALA GLY VAL ALA SEQRES 17 A 253 ARG THR PHE ARG GLU LEU LEU GLU GLY GLU ALA GLN GLY SEQRES 18 A 253 ALA PHE GLU HIS VAL THR PHE ALA VAL LEU ASP ASN HIS SEQRES 19 A 253 PRO GLN HIS PRO THR LEU GLY ALA PHE ARG ARG GLU LEU SEQRES 20 A 253 GLU SER LEU CYS LEU PRO SEQRES 1 B 253 VAL ARG LEU PRO GLY LEU ALA ALA MET ARG GLN GLY THR SEQRES 2 B 253 ARG LEU PHE THR PRO GLU GLN GLY GLU ASP LEU ARG GLU SEQRES 3 B 253 ALA LEU ARG ARG ARG ARG GLY SER PHE GLN THR THR CYS SEQRES 4 B 253 GLU VAL THR SER GLU THR THR PHE ALA ALA ALA ARG ARG SEQRES 5 B 253 LEU ARG GLU LYS ALA SER ALA LEU ALA ALA LEU ASN PHE SEQRES 6 B 253 ALA SER ALA LYS ASN PRO GLY GLY GLY PHE LEU GLY GLY SEQRES 7 B 253 ALA GLN ALA GLN GLU GLU ASP LEU CYS ARG GLY SER GLY SEQRES 8 B 253 LEU TYR PHE SER LEU THR SER PRO GLN ALA GLU PRO TYR SEQRES 9 B 253 TYR ALA VAL ASN ARG GLN SER HIS SER ALA LEU TYR THR SEQRES 10 B 253 ASP HIS LEU ILE TYR SER PRO GLN VAL PRO ILE PHE ARG SEQRES 11 B 253 ASP ASP ALA GLY GLN LEU LEU PRO ALA PRO VAL PRO VAL SEQRES 12 B 253 ASN ILE ILE THR ALA PRO ALA PRO ASN ALA GLY ALA VAL SEQRES 13 B 253 ALA GLN SER ARG PRO GLU GLN LEU PRO GLN VAL LEU PRO SEQRES 14 B 253 THR LEU ARG GLU ARG ALA ARG ARG VAL LEU GLY VAL ALA SEQRES 15 B 253 ALA TRP MET GLU GLN THR HIS LEU VAL LEU GLY ALA TRP SEQRES 16 B 253 GLY CYS GLY VAL PHE ARG ASN ASP PRO ALA GLY VAL ALA SEQRES 17 B 253 ARG THR PHE ARG GLU LEU LEU GLU GLY GLU ALA GLN GLY SEQRES 18 B 253 ALA PHE GLU HIS VAL THR PHE ALA VAL LEU ASP ASN HIS SEQRES 19 B 253 PRO GLN HIS PRO THR LEU GLY ALA PHE ARG ARG GLU LEU SEQRES 20 B 253 GLU SER LEU CYS LEU PRO HET AR6 A 301 36 HET AR6 B 301 36 HETNAM AR6 [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY- HETNAM 2 AR6 OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5- HETNAM 3 AR6 TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN HETNAM 4 AR6 PHOSPHATE HETSYN AR6 ADENOSINE-5-DIPHOSPHORIBOSE FORMUL 3 AR6 2(C15 H23 N5 O14 P2) FORMUL 5 HOH *266(H2 O) HELIX 1 AA1 GLY A 33 THR A 41 1 9 HELIX 2 AA2 THR A 45 GLU A 47 5 3 HELIX 3 AA3 GLN A 48 ARG A 60 1 13 HELIX 4 AA4 THR A 73 GLU A 83 1 11 HELIX 5 AA5 ASN A 98 LEU A 104 5 7 HELIX 6 AA6 ALA A 109 SER A 118 1 10 HELIX 7 AA7 GLY A 119 THR A 125 1 7 HELIX 8 AA8 SER A 126 GLN A 128 5 3 HELIX 9 AA9 ALA A 129 HIS A 140 1 12 HELIX 10 AB1 ASN A 180 ARG A 188 1 9 HELIX 11 AB2 PRO A 189 PRO A 193 5 5 HELIX 12 AB3 GLN A 194 MET A 213 1 20 HELIX 13 AB4 ASP A 231 GLY A 245 1 15 HELIX 14 AB5 HIS A 265 LEU A 280 1 16 HELIX 15 AB6 GLY B 33 THR B 41 1 9 HELIX 16 AB7 THR B 45 GLU B 47 5 3 HELIX 17 AB8 GLN B 48 ARG B 60 1 13 HELIX 18 AB9 THR B 73 GLU B 83 1 11 HELIX 19 AC1 ASN B 98 LEU B 104 5 7 HELIX 20 AC2 ALA B 109 SER B 118 1 10 HELIX 21 AC3 GLY B 119 THR B 125 1 7 HELIX 22 AC4 SER B 126 GLN B 128 5 3 HELIX 23 AC5 ALA B 129 HIS B 140 1 12 HELIX 24 AC6 ASN B 180 ARG B 188 1 9 HELIX 25 AC7 PRO B 189 PRO B 193 5 5 HELIX 26 AC8 GLN B 194 MET B 213 1 20 HELIX 27 AC9 ASP B 231 GLY B 245 1 15 HELIX 28 AD1 HIS B 265 GLU B 276 1 12 SHEET 1 AA1 7 ARG A 42 PHE A 44 0 SHEET 2 AA1 7 LEU A 148 ARG A 158 -1 O LEU A 148 N PHE A 44 SHEET 3 AA1 7 LEU A 164 ALA A 176 -1 O VAL A 171 N VAL A 154 SHEET 4 AA1 7 LEU A 88 PHE A 93 1 N ASN A 92 O ILE A 174 SHEET 5 AA1 7 HIS A 217 LEU A 220 1 O HIS A 217 N ALA A 89 SHEET 6 AA1 7 HIS A 253 ALA A 257 1 O THR A 255 N LEU A 218 SHEET 7 AA1 7 THR A 66 THR A 70 1 N GLU A 68 O PHE A 256 SHEET 1 AA2 7 ARG B 42 PHE B 44 0 SHEET 2 AA2 7 LEU B 148 ARG B 158 -1 O LEU B 148 N PHE B 44 SHEET 3 AA2 7 LEU B 164 ALA B 176 -1 O THR B 175 N ILE B 149 SHEET 4 AA2 7 LEU B 88 PHE B 93 1 N ASN B 92 O ILE B 174 SHEET 5 AA2 7 HIS B 217 LEU B 220 1 O HIS B 217 N ALA B 89 SHEET 6 AA2 7 HIS B 253 ALA B 257 1 O THR B 255 N LEU B 218 SHEET 7 AA2 7 THR B 66 THR B 70 1 N GLU B 68 O PHE B 256 SSBOND 1 CYS A 67 CYS A 279 1555 1555 2.06 SITE 1 AC1 24 THR A 73 THR A 74 PHE A 93 SER A 95 SITE 2 AC1 24 GLY A 101 GLN A 108 ALA A 109 GLN A 110 SITE 3 AC1 24 GLU A 111 ASP A 113 ALA A 222 GLY A 224 SITE 4 AC1 24 CYS A 225 GLY A 226 VAL A 227 PHE A 228 SITE 5 AC1 24 LEU A 259 HOH A 405 HOH A 414 HOH A 415 SITE 6 AC1 24 HOH A 446 HOH A 456 HOH A 467 HOH A 498 SITE 1 AC2 24 THR B 73 THR B 74 PHE B 93 SER B 95 SITE 2 AC2 24 GLY B 101 ALA B 109 GLN B 110 GLU B 111 SITE 3 AC2 24 ASP B 113 ALA B 222 GLY B 224 CYS B 225 SITE 4 AC2 24 GLY B 226 VAL B 227 PHE B 228 ALA B 257 SITE 5 AC2 24 LEU B 259 HOH B 407 HOH B 413 HOH B 428 SITE 6 AC2 24 HOH B 429 HOH B 448 HOH B 454 HOH B 486 CRYST1 43.290 97.427 59.369 90.00 93.65 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023100 0.000000 0.001474 0.00000 SCALE2 0.000000 0.010264 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016878 0.00000