HEADER SUGAR BINDING PROTEIN 14-MAR-18 5ZIC TITLE CRYSTAL STRUCTURE OF HUMAN GNT-V LUMINAL DOMAIN IN COMPLEX WITH TITLE 2 ACCEPTOR SUGAR COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-1,6-MANNOSYLGLYCOPROTEIN 6-BETA-N- COMPND 3 ACETYLGLUCOSAMINYLTRANSFERASE A; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE, COMPND 6 GLCNAC-T V,GNT-V,MANNOSIDE ACETYLGLUCOSAMINYLTRANSFERASE 5,N- COMPND 7 ACETYLGLUCOSAMINYL-TRANSFERASE V; COMPND 8 EC: 2.4.1.155; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MGAT5, GGNT5; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: EXPI293; SOURCE 9 EXPRESSION_SYSTEM_ATCC_NUMBER: CRL-1573; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSEC-NPA KEYWDS GLYCOSYLTRANSFERASE CANCER METASTASIS LUMINAL PROTEIN, SUGAR BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.NAGAE,Y.YAMAGUCHI REVDAT 5 22-NOV-23 5ZIC 1 REMARK REVDAT 4 05-AUG-20 5ZIC 1 HETSYN LINK ATOM REVDAT 3 29-JUL-20 5ZIC 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 05-SEP-18 5ZIC 1 JRNL REVDAT 1 01-AUG-18 5ZIC 0 JRNL AUTH M.NAGAE,Y.KIZUKA,E.MIHARA,Y.KITAGO,S.HANASHIMA,Y.ITO, JRNL AUTH 2 J.TAKAGI,N.TANIGUCHI,Y.YAMAGUCHI JRNL TITL STRUCTURE AND MECHANISM OF CANCER-ASSOCIATED JRNL TITL 2 N-ACETYLGLUCOSAMINYLTRANSFERASE-V. JRNL REF NAT COMMUN V. 9 3380 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 30140003 JRNL DOI 10.1038/S41467-018-05931-W REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 63146 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3196 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6110 - 5.9676 0.99 2711 143 0.1811 0.1969 REMARK 3 2 5.9676 - 4.7383 0.99 2673 127 0.1617 0.2075 REMARK 3 3 4.7383 - 4.1399 0.99 2662 137 0.1538 0.2160 REMARK 3 4 4.1399 - 3.7616 0.99 2642 138 0.1663 0.2268 REMARK 3 5 3.7616 - 3.4921 0.99 2664 134 0.1983 0.2558 REMARK 3 6 3.4921 - 3.2863 0.99 2605 135 0.2223 0.2580 REMARK 3 7 3.2863 - 3.1217 0.99 2632 147 0.2316 0.2753 REMARK 3 8 3.1217 - 2.9859 0.99 2600 130 0.2469 0.3096 REMARK 3 9 2.9859 - 2.8709 0.99 2642 135 0.2546 0.2729 REMARK 3 10 2.8709 - 2.7719 0.99 2573 154 0.2569 0.3207 REMARK 3 11 2.7719 - 2.6852 0.98 2616 145 0.2526 0.3211 REMARK 3 12 2.6852 - 2.6085 0.98 2558 155 0.2519 0.2943 REMARK 3 13 2.6085 - 2.5398 0.98 2616 136 0.2492 0.3199 REMARK 3 14 2.5398 - 2.4779 0.98 2584 135 0.2536 0.3492 REMARK 3 15 2.4779 - 2.4215 0.98 2572 146 0.2625 0.3003 REMARK 3 16 2.4215 - 2.3700 0.98 2597 131 0.2603 0.3367 REMARK 3 17 2.3700 - 2.3226 0.98 2577 140 0.2687 0.3832 REMARK 3 18 2.3226 - 2.2788 0.98 2576 149 0.2608 0.3110 REMARK 3 19 2.2788 - 2.2381 0.97 2608 129 0.3031 0.3426 REMARK 3 20 2.2381 - 2.2001 0.97 2550 139 0.2940 0.3368 REMARK 3 21 2.2001 - 2.1646 0.98 2581 126 0.2983 0.3561 REMARK 3 22 2.1646 - 2.1313 0.98 2560 124 0.2942 0.3766 REMARK 3 23 2.1313 - 2.1000 0.97 2551 161 0.3107 0.3593 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 8255 REMARK 3 ANGLE : 0.664 11154 REMARK 3 CHIRALITY : 0.042 1211 REMARK 3 PLANARITY : 0.004 1408 REMARK 3 DIHEDRAL : 14.492 4991 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZIC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1300007048. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63177 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 44.601 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5ZIB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES (PH 7.0), 0.1M MAGNESIUM REMARK 280 CHLORIDE, 15 % (W/V) PEG 4000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.60100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 208 REMARK 465 LYS A 209 REMARK 465 ASP A 210 REMARK 465 GLY A 211 REMARK 465 SER A 212 REMARK 465 ASN A 213 REMARK 465 LYS A 284 REMARK 465 ILE A 285 REMARK 465 ALA A 286 REMARK 465 GLU A 287 REMARK 465 THR A 288 REMARK 465 ALA A 289 REMARK 465 PHE A 290 REMARK 465 SER A 291 REMARK 465 GLY A 292 REMARK 465 GLY A 293 REMARK 465 PRO A 294 REMARK 465 LEU A 295 REMARK 465 GLY A 296 REMARK 465 LYS A 340 REMARK 465 GLY A 341 REMARK 465 GLY A 342 REMARK 465 GLY A 343 REMARK 465 GLY A 344 REMARK 465 ASN A 433 REMARK 465 SER A 434 REMARK 465 SER A 435 REMARK 465 ASP A 436 REMARK 465 ILE A 437 REMARK 465 HIS A 438 REMARK 465 HIS A 439 REMARK 465 ILE A 440 REMARK 465 ASN A 441 REMARK 465 GLU A 442 REMARK 465 ILE A 443 REMARK 465 GLY A 481 REMARK 465 SER A 482 REMARK 465 SER A 483 REMARK 465 GLY B 208 REMARK 465 LYS B 209 REMARK 465 ASP B 210 REMARK 465 GLY B 211 REMARK 465 SER B 212 REMARK 465 ASN B 213 REMARK 465 LYS B 230 REMARK 465 LYS B 231 REMARK 465 LYS B 340 REMARK 465 GLY B 341 REMARK 465 GLY B 342 REMARK 465 GLY B 343 REMARK 465 GLY B 344 REMARK 465 LEU B 432 REMARK 465 ASN B 433 REMARK 465 SER B 434 REMARK 465 SER B 435 REMARK 465 ASP B 436 REMARK 465 ILE B 437 REMARK 465 HIS B 438 REMARK 465 HIS B 439 REMARK 465 ILE B 440 REMARK 465 ASN B 441 REMARK 465 GLU B 442 REMARK 465 GLY B 481 REMARK 465 SER B 482 REMARK 465 SER B 483 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 297 CG CD OE1 OE2 REMARK 470 GLU B 297 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 426 -178.93 -170.62 REMARK 500 ASN A 461 -1.03 72.75 REMARK 500 PRO A 555 45.46 -76.60 REMARK 500 ILE A 571 -70.48 -113.52 REMARK 500 LEU A 658 -165.25 -120.68 REMARK 500 ASN A 699 73.21 -166.84 REMARK 500 LYS A 700 -31.08 56.56 REMARK 500 ARG A 719 -31.22 -131.52 REMARK 500 GLU B 233 -163.74 -101.32 REMARK 500 GLU B 234 45.52 -85.30 REMARK 500 PHE B 290 -74.70 -72.45 REMARK 500 PHE B 426 -168.21 -168.73 REMARK 500 PRO B 555 49.15 -78.00 REMARK 500 ILE B 571 -65.06 -120.14 REMARK 500 HIS B 627 45.76 -103.03 REMARK 500 GLN B 733 71.42 -156.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 700 HIS A 701 -146.82 REMARK 500 GLU B 234 PHE B 235 149.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ZIB RELATED DB: PDB DBREF 5ZIC A 213 340 UNP Q09328 MGT5A_HUMAN 213 329 DBREF 5ZIC A 345 741 UNP Q09328 MGT5A_HUMAN 345 741 DBREF 5ZIC B 213 340 UNP Q09328 MGT5A_HUMAN 213 329 DBREF 5ZIC B 345 741 UNP Q09328 MGT5A_HUMAN 345 741 SEQADV 5ZIC GLY A 208 UNP Q09328 EXPRESSION TAG SEQADV 5ZIC LYS A 209 UNP Q09328 EXPRESSION TAG SEQADV 5ZIC ASP A 210 UNP Q09328 EXPRESSION TAG SEQADV 5ZIC GLY A 211 UNP Q09328 EXPRESSION TAG SEQADV 5ZIC SER A 212 UNP Q09328 EXPRESSION TAG SEQADV 5ZIC GLY A 341 UNP Q09328 LINKER SEQADV 5ZIC GLY A 342 UNP Q09328 LINKER SEQADV 5ZIC GLY A 343 UNP Q09328 LINKER SEQADV 5ZIC GLY A 344 UNP Q09328 LINKER SEQADV 5ZIC GLY B 208 UNP Q09328 EXPRESSION TAG SEQADV 5ZIC LYS B 209 UNP Q09328 EXPRESSION TAG SEQADV 5ZIC ASP B 210 UNP Q09328 EXPRESSION TAG SEQADV 5ZIC GLY B 211 UNP Q09328 EXPRESSION TAG SEQADV 5ZIC SER B 212 UNP Q09328 EXPRESSION TAG SEQADV 5ZIC GLY B 341 UNP Q09328 LINKER SEQADV 5ZIC GLY B 342 UNP Q09328 LINKER SEQADV 5ZIC GLY B 343 UNP Q09328 LINKER SEQADV 5ZIC GLY B 344 UNP Q09328 LINKER SEQRES 1 A 523 GLY LYS ASP GLY SER ASN SER LEU ALA GLU ILE ARG THR SEQRES 2 A 523 ASP PHE ASN ILE LEU TYR SER MET MET LYS LYS HIS GLU SEQRES 3 A 523 GLU PHE ARG TRP MET ARG LEU ARG ILE ARG ARG MET ALA SEQRES 4 A 523 ASP ALA TRP ILE GLN ALA ILE LYS SER LEU ALA GLU LYS SEQRES 5 A 523 GLN ASN LEU GLU LYS ARG LYS ARG LYS LYS VAL LEU VAL SEQRES 6 A 523 HIS LEU GLY LEU LEU THR LYS GLU SER GLY PHE LYS ILE SEQRES 7 A 523 ALA GLU THR ALA PHE SER GLY GLY PRO LEU GLY GLU LEU SEQRES 8 A 523 VAL GLN TRP SER ASP LEU ILE THR SER LEU TYR LEU LEU SEQRES 9 A 523 GLY HIS ASP ILE ARG ILE SER ALA SER LEU ALA GLU LEU SEQRES 10 A 523 LYS GLU ILE MET LYS GLY GLY GLY GLY ILE VAL GLU LEU SEQRES 11 A 523 ILE TYR ILE ASP ILE VAL GLY LEU ALA GLN PHE LYS LYS SEQRES 12 A 523 THR LEU GLY PRO SER TRP VAL HIS TYR GLN CYS MET LEU SEQRES 13 A 523 ARG VAL LEU ASP SER PHE GLY THR GLU PRO GLU PHE ASN SEQRES 14 A 523 HIS ALA ASN TYR ALA GLN SER LYS GLY HIS LYS THR PRO SEQRES 15 A 523 TRP GLY LYS TRP ASN LEU ASN PRO GLN GLN PHE TYR THR SEQRES 16 A 523 MET PHE PRO HIS THR PRO ASP ASN SER PHE LEU GLY PHE SEQRES 17 A 523 VAL VAL GLU GLN HIS LEU ASN SER SER ASP ILE HIS HIS SEQRES 18 A 523 ILE ASN GLU ILE LYS ARG GLN ASN GLN SER LEU VAL TYR SEQRES 19 A 523 GLY LYS VAL ASP SER PHE TRP LYS ASN LYS LYS ILE TYR SEQRES 20 A 523 LEU ASP ILE ILE HIS THR TYR MET GLU VAL HIS ALA THR SEQRES 21 A 523 VAL TYR GLY SER SER THR LYS ASN ILE PRO SER TYR VAL SEQRES 22 A 523 LYS ASN HIS GLY ILE LEU SER GLY ARG ASP LEU GLN PHE SEQRES 23 A 523 LEU LEU ARG GLU THR LYS LEU PHE VAL GLY LEU GLY PHE SEQRES 24 A 523 PRO TYR GLU GLY PRO ALA PRO LEU GLU ALA ILE ALA ASN SEQRES 25 A 523 GLY CYS ALA PHE LEU ASN PRO LYS PHE ASN PRO PRO LYS SEQRES 26 A 523 SER SER LYS ASN THR ASP PHE PHE ILE GLY LYS PRO THR SEQRES 27 A 523 LEU ARG GLU LEU THR SER GLN HIS PRO TYR ALA GLU VAL SEQRES 28 A 523 PHE ILE GLY ARG PRO HIS VAL TRP THR VAL ASP LEU ASN SEQRES 29 A 523 ASN GLN GLU GLU VAL GLU ASP ALA VAL LYS ALA ILE LEU SEQRES 30 A 523 ASN GLN LYS ILE GLU PRO TYR MET PRO TYR GLU PHE THR SEQRES 31 A 523 CYS GLU GLY MET LEU GLN ARG ILE ASN ALA PHE ILE GLU SEQRES 32 A 523 LYS GLN ASP PHE CYS HIS GLY GLN VAL MET TRP PRO PRO SEQRES 33 A 523 LEU SER ALA LEU GLN VAL LYS LEU ALA GLU PRO GLY GLN SEQRES 34 A 523 SER CYS LYS GLN VAL CYS GLN GLU SER GLN LEU ILE CYS SEQRES 35 A 523 GLU PRO SER PHE PHE GLN HIS LEU ASN LYS ASP LYS ASP SEQRES 36 A 523 MET LEU LYS TYR LYS VAL THR CYS GLN SER SER GLU LEU SEQRES 37 A 523 ALA LYS ASP ILE LEU VAL PRO SER PHE ASP PRO LYS ASN SEQRES 38 A 523 LYS HIS CYS VAL PHE GLN GLY ASP LEU LEU LEU PHE SER SEQRES 39 A 523 CYS ALA GLY ALA HIS PRO ARG HIS GLN ARG VAL CYS PRO SEQRES 40 A 523 CYS ARG ASP PHE ILE LYS GLY GLN VAL ALA LEU CYS LYS SEQRES 41 A 523 ASP CYS LEU SEQRES 1 B 523 GLY LYS ASP GLY SER ASN SER LEU ALA GLU ILE ARG THR SEQRES 2 B 523 ASP PHE ASN ILE LEU TYR SER MET MET LYS LYS HIS GLU SEQRES 3 B 523 GLU PHE ARG TRP MET ARG LEU ARG ILE ARG ARG MET ALA SEQRES 4 B 523 ASP ALA TRP ILE GLN ALA ILE LYS SER LEU ALA GLU LYS SEQRES 5 B 523 GLN ASN LEU GLU LYS ARG LYS ARG LYS LYS VAL LEU VAL SEQRES 6 B 523 HIS LEU GLY LEU LEU THR LYS GLU SER GLY PHE LYS ILE SEQRES 7 B 523 ALA GLU THR ALA PHE SER GLY GLY PRO LEU GLY GLU LEU SEQRES 8 B 523 VAL GLN TRP SER ASP LEU ILE THR SER LEU TYR LEU LEU SEQRES 9 B 523 GLY HIS ASP ILE ARG ILE SER ALA SER LEU ALA GLU LEU SEQRES 10 B 523 LYS GLU ILE MET LYS GLY GLY GLY GLY ILE VAL GLU LEU SEQRES 11 B 523 ILE TYR ILE ASP ILE VAL GLY LEU ALA GLN PHE LYS LYS SEQRES 12 B 523 THR LEU GLY PRO SER TRP VAL HIS TYR GLN CYS MET LEU SEQRES 13 B 523 ARG VAL LEU ASP SER PHE GLY THR GLU PRO GLU PHE ASN SEQRES 14 B 523 HIS ALA ASN TYR ALA GLN SER LYS GLY HIS LYS THR PRO SEQRES 15 B 523 TRP GLY LYS TRP ASN LEU ASN PRO GLN GLN PHE TYR THR SEQRES 16 B 523 MET PHE PRO HIS THR PRO ASP ASN SER PHE LEU GLY PHE SEQRES 17 B 523 VAL VAL GLU GLN HIS LEU ASN SER SER ASP ILE HIS HIS SEQRES 18 B 523 ILE ASN GLU ILE LYS ARG GLN ASN GLN SER LEU VAL TYR SEQRES 19 B 523 GLY LYS VAL ASP SER PHE TRP LYS ASN LYS LYS ILE TYR SEQRES 20 B 523 LEU ASP ILE ILE HIS THR TYR MET GLU VAL HIS ALA THR SEQRES 21 B 523 VAL TYR GLY SER SER THR LYS ASN ILE PRO SER TYR VAL SEQRES 22 B 523 LYS ASN HIS GLY ILE LEU SER GLY ARG ASP LEU GLN PHE SEQRES 23 B 523 LEU LEU ARG GLU THR LYS LEU PHE VAL GLY LEU GLY PHE SEQRES 24 B 523 PRO TYR GLU GLY PRO ALA PRO LEU GLU ALA ILE ALA ASN SEQRES 25 B 523 GLY CYS ALA PHE LEU ASN PRO LYS PHE ASN PRO PRO LYS SEQRES 26 B 523 SER SER LYS ASN THR ASP PHE PHE ILE GLY LYS PRO THR SEQRES 27 B 523 LEU ARG GLU LEU THR SER GLN HIS PRO TYR ALA GLU VAL SEQRES 28 B 523 PHE ILE GLY ARG PRO HIS VAL TRP THR VAL ASP LEU ASN SEQRES 29 B 523 ASN GLN GLU GLU VAL GLU ASP ALA VAL LYS ALA ILE LEU SEQRES 30 B 523 ASN GLN LYS ILE GLU PRO TYR MET PRO TYR GLU PHE THR SEQRES 31 B 523 CYS GLU GLY MET LEU GLN ARG ILE ASN ALA PHE ILE GLU SEQRES 32 B 523 LYS GLN ASP PHE CYS HIS GLY GLN VAL MET TRP PRO PRO SEQRES 33 B 523 LEU SER ALA LEU GLN VAL LYS LEU ALA GLU PRO GLY GLN SEQRES 34 B 523 SER CYS LYS GLN VAL CYS GLN GLU SER GLN LEU ILE CYS SEQRES 35 B 523 GLU PRO SER PHE PHE GLN HIS LEU ASN LYS ASP LYS ASP SEQRES 36 B 523 MET LEU LYS TYR LYS VAL THR CYS GLN SER SER GLU LEU SEQRES 37 B 523 ALA LYS ASP ILE LEU VAL PRO SER PHE ASP PRO LYS ASN SEQRES 38 B 523 LYS HIS CYS VAL PHE GLN GLY ASP LEU LEU LEU PHE SER SEQRES 39 B 523 CYS ALA GLY ALA HIS PRO ARG HIS GLN ARG VAL CYS PRO SEQRES 40 B 523 CYS ARG ASP PHE ILE LYS GLY GLN VAL ALA LEU CYS LYS SEQRES 41 B 523 ASP CYS LEU HET BMA C 1 12 HET Z4Y C 2 11 HET NAG C 3 14 HET BMA D 1 12 HET Z4Y D 2 11 HET NAG D 3 14 HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM Z4Y 6-THIO-ALPHA-D-MANNOPYRANOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN Z4Y 6-THIO-ALPHA-D-MANNOSE; 6-THIO-D-MANNOSE; 6-THIO- HETSYN 2 Z4Y MANNOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 BMA 2(C6 H12 O6) FORMUL 3 Z4Y 2(C6 H12 O5 S) FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 5 HOH *218(H2 O) HELIX 1 AA1 PHE A 222 LYS A 231 1 10 HELIX 2 AA2 HIS A 232 GLU A 234 5 3 HELIX 3 AA3 PHE A 235 MET A 245 1 11 HELIX 4 AA4 MET A 245 GLN A 260 1 16 HELIX 5 AA5 GLY A 275 GLY A 282 5 8 HELIX 6 AA6 LEU A 298 LEU A 311 1 14 HELIX 7 AA7 SER A 320 MET A 328 1 9 HELIX 8 AA8 ILE A 353 GLY A 364 1 12 HELIX 9 AA9 PRO A 365 CYS A 372 5 8 HELIX 10 AB1 GLU A 383 HIS A 388 1 6 HELIX 11 AB2 HIS A 388 GLY A 396 1 9 HELIX 12 AB3 ASN A 407 GLN A 409 5 3 HELIX 13 AB4 VAL A 455 LYS A 460 5 6 HELIX 14 AB5 LYS A 462 MET A 473 1 12 HELIX 15 AB6 SER A 498 GLU A 508 1 11 HELIX 16 AB7 PRO A 522 ASN A 530 1 9 HELIX 17 AB8 THR A 548 ILE A 552 5 5 HELIX 18 AB9 HIS A 564 ILE A 571 1 8 HELIX 19 AC1 ASN A 583 GLN A 597 1 15 HELIX 20 AC2 PRO A 604 PHE A 607 5 4 HELIX 21 AC3 THR A 608 GLN A 623 1 16 HELIX 22 AC4 PRO A 634 LEU A 638 5 5 HELIX 23 AC5 SER A 648 GLU A 655 1 8 HELIX 24 AC6 PRO A 662 LEU A 668 5 7 HELIX 25 AC7 LYS A 670 LYS A 676 1 7 HELIX 26 AC8 ASP A 707 PHE A 711 5 5 HELIX 27 AC9 PHE B 222 MET B 229 1 8 HELIX 28 AD1 PHE B 235 GLN B 260 1 26 HELIX 29 AD2 LYS B 284 GLY B 292 1 9 HELIX 30 AD3 LEU B 295 LEU B 311 1 17 HELIX 31 AD4 SER B 320 MET B 328 1 9 HELIX 32 AD5 ILE B 353 GLY B 364 1 12 HELIX 33 AD6 PRO B 365 CYS B 372 5 8 HELIX 34 AD7 GLU B 383 HIS B 388 1 6 HELIX 35 AD8 HIS B 388 LYS B 395 1 8 HELIX 36 AD9 ASN B 407 GLN B 409 5 3 HELIX 37 AE1 VAL B 455 LYS B 460 5 6 HELIX 38 AE2 LYS B 462 THR B 471 1 10 HELIX 39 AE3 SER B 498 THR B 509 1 12 HELIX 40 AE4 PRO B 522 ASN B 530 1 9 HELIX 41 AE5 HIS B 564 ILE B 571 1 8 HELIX 42 AE6 ASN B 583 ASN B 596 1 14 HELIX 43 AE7 PRO B 604 PHE B 607 5 4 HELIX 44 AE8 THR B 608 GLN B 623 1 16 HELIX 45 AE9 PRO B 634 SER B 636 5 3 HELIX 46 AF1 SER B 648 GLU B 655 1 8 HELIX 47 AF2 PRO B 662 LEU B 668 5 7 HELIX 48 AF3 LYS B 670 LYS B 676 1 7 HELIX 49 AF4 ASP B 707 PHE B 711 5 5 SHEET 1 AA1 6 ASP A 314 SER A 318 0 SHEET 2 AA1 6 LYS A 269 HIS A 273 1 N VAL A 270 O ASP A 314 SHEET 3 AA1 6 LEU A 348 ASP A 352 1 O TYR A 350 N LEU A 271 SHEET 4 AA1 6 LEU A 374 LEU A 377 1 O ARG A 375 N ILE A 349 SHEET 5 AA1 6 PHE A 411 THR A 413 1 O TYR A 412 N VAL A 376 SHEET 6 AA1 6 SER A 422 PHE A 423 1 O SER A 422 N PHE A 411 SHEET 1 AA2 6 LYS A 492 ASN A 493 0 SHEET 2 AA2 6 GLU A 474 ALA A 477 1 N VAL A 475 O LYS A 492 SHEET 3 AA2 6 GLN A 446 VAL A 451 1 N SER A 449 O GLU A 474 SHEET 4 AA2 6 THR A 509 VAL A 513 1 O VAL A 513 N LEU A 450 SHEET 5 AA2 6 ALA A 533 LYS A 543 1 O ALA A 533 N PHE A 512 SHEET 6 AA2 6 LEU A 560 SER A 562 -1 O LEU A 560 N LYS A 543 SHEET 1 AA3 6 LYS A 492 ASN A 493 0 SHEET 2 AA3 6 GLU A 474 ALA A 477 1 N VAL A 475 O LYS A 492 SHEET 3 AA3 6 GLN A 446 VAL A 451 1 N SER A 449 O GLU A 474 SHEET 4 AA3 6 THR A 509 VAL A 513 1 O VAL A 513 N LEU A 450 SHEET 5 AA3 6 ALA A 533 LYS A 543 1 O ALA A 533 N PHE A 512 SHEET 6 AA3 6 VAL A 576 VAL A 579 1 O TRP A 577 N PHE A 534 SHEET 1 AA4 3 GLN A 639 ALA A 643 0 SHEET 2 AA4 3 GLN A 721 ARG A 727 -1 O CYS A 724 N LYS A 641 SHEET 3 AA4 3 ILE A 659 CYS A 660 -1 N ILE A 659 O ARG A 727 SHEET 1 AA5 5 GLN A 639 ALA A 643 0 SHEET 2 AA5 5 GLN A 721 ARG A 727 -1 O CYS A 724 N LYS A 641 SHEET 3 AA5 5 SER A 694 PHE A 695 -1 N PHE A 695 O GLN A 721 SHEET 4 AA5 5 CYS A 702 GLN A 705 -1 O VAL A 703 N SER A 694 SHEET 5 AA5 5 SER A 684 ALA A 687 1 N GLU A 685 O PHE A 704 SHEET 1 AA6 6 ASP B 314 SER B 318 0 SHEET 2 AA6 6 LYS B 269 HIS B 273 1 N VAL B 270 O ASP B 314 SHEET 3 AA6 6 LEU B 348 ASP B 352 1 O TYR B 350 N LEU B 271 SHEET 4 AA6 6 LEU B 374 LEU B 377 1 O ARG B 375 N ILE B 349 SHEET 5 AA6 6 PHE B 411 THR B 413 1 O TYR B 412 N VAL B 376 SHEET 6 AA6 6 SER B 422 PHE B 423 1 O SER B 422 N THR B 413 SHEET 1 AA7 6 LYS B 492 ASN B 493 0 SHEET 2 AA7 6 GLU B 474 ALA B 477 1 N VAL B 475 O LYS B 492 SHEET 3 AA7 6 GLN B 448 TYR B 452 1 N SER B 449 O GLU B 474 SHEET 4 AA7 6 LEU B 511 GLY B 514 1 O VAL B 513 N TYR B 452 SHEET 5 AA7 6 ALA B 533 LYS B 543 1 O ALA B 533 N PHE B 512 SHEET 6 AA7 6 LEU B 560 SER B 562 -1 O LEU B 560 N LYS B 543 SHEET 1 AA8 6 LYS B 492 ASN B 493 0 SHEET 2 AA8 6 GLU B 474 ALA B 477 1 N VAL B 475 O LYS B 492 SHEET 3 AA8 6 GLN B 448 TYR B 452 1 N SER B 449 O GLU B 474 SHEET 4 AA8 6 LEU B 511 GLY B 514 1 O VAL B 513 N TYR B 452 SHEET 5 AA8 6 ALA B 533 LYS B 543 1 O ALA B 533 N PHE B 512 SHEET 6 AA8 6 VAL B 576 VAL B 579 1 O TRP B 577 N PHE B 534 SHEET 1 AA9 3 LEU B 638 ALA B 643 0 SHEET 2 AA9 3 GLN B 721 ARG B 727 -1 O CYS B 726 N GLN B 639 SHEET 3 AA9 3 ILE B 659 CYS B 660 -1 N ILE B 659 O ARG B 727 SHEET 1 AB1 5 LEU B 638 ALA B 643 0 SHEET 2 AB1 5 GLN B 721 ARG B 727 -1 O CYS B 726 N GLN B 639 SHEET 3 AB1 5 SER B 694 ASP B 696 -1 N PHE B 695 O GLN B 721 SHEET 4 AB1 5 HIS B 701 GLN B 705 -1 O HIS B 701 N ASP B 696 SHEET 5 AB1 5 SER B 683 ALA B 687 1 N ALA B 687 O PHE B 704 SSBOND 1 CYS A 372 CYS A 626 1555 1555 2.03 SSBOND 2 CYS A 649 CYS A 724 1555 1555 2.03 SSBOND 3 CYS A 653 CYS A 726 1555 1555 2.03 SSBOND 4 CYS A 660 CYS A 713 1555 1555 2.03 SSBOND 5 CYS A 681 CYS A 702 1555 1555 2.03 SSBOND 6 CYS A 737 CYS A 740 1555 1555 2.03 SSBOND 7 CYS B 372 CYS B 626 1555 1555 2.03 SSBOND 8 CYS B 649 CYS B 724 1555 1555 2.03 SSBOND 9 CYS B 653 CYS B 726 1555 1555 2.03 SSBOND 10 CYS B 660 CYS B 713 1555 1555 2.03 SSBOND 11 CYS B 681 CYS B 702 1555 1555 2.03 SSBOND 12 CYS B 737 CYS B 740 1555 1555 2.03 LINK O6 BMA C 1 C1 Z4Y C 2 1555 1555 1.38 LINK O2 Z4Y C 2 C1 NAG C 3 1555 1555 1.37 LINK O6 BMA D 1 C1 Z4Y D 2 1555 1555 1.37 LINK O2 Z4Y D 2 C1 NAG D 3 1555 1555 1.37 CISPEP 1 PHE A 517 PRO A 518 0 5.99 CISPEP 2 ASN A 540 PRO A 541 0 3.16 CISPEP 3 ARG A 573 PRO A 574 0 1.67 CISPEP 4 TRP A 632 PRO A 633 0 5.08 CISPEP 5 VAL A 692 PRO A 693 0 10.46 CISPEP 6 PHE B 517 PRO B 518 0 4.24 CISPEP 7 ASN B 540 PRO B 541 0 3.82 CISPEP 8 ARG B 573 PRO B 574 0 4.15 CISPEP 9 TRP B 632 PRO B 633 0 5.02 CISPEP 10 VAL B 692 PRO B 693 0 8.50 CRYST1 70.421 89.202 92.234 90.00 105.55 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014200 0.000000 0.003950 0.00000 SCALE2 0.000000 0.011211 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011254 0.00000