HEADER LIGASE 23-MAR-18 5ZK6 TITLE CRYSTAL STRUCTURE OF RIMK COMPLEXED WITH RPSF COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOMAL PROTEIN S6--L-GLUTAMATE LIGASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POLYGLUTAMATE SYNTHASE,RIBOSOMAL PROTEIN S6 MODIFICATION COMPND 5 PROTEIN; COMPND 6 EC: 6.3.2.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 GENE: RIMK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS RIBOSOMAL PROTEIN MODIFICATION PROTEIN, CARBOXYLATE-AMINE/THIOL KEYWDS 2 LIGASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.ARIMURA,T.KONO,K.KINO,H.KURUMIZAKA REVDAT 2 22-NOV-23 5ZK6 1 REMARK REVDAT 1 27-MAR-19 5ZK6 0 JRNL AUTH J.OHNUKI,Y.ARIMURA,T.KONO,K.KINO,H.KURUMIZAKA,M.TAKANO JRNL TITL MOLECULAR DYNAMICS PREDICTION OF SUBSTRATE RECOGNITION BY JRNL TITL 2 POLY-ALPHA-L-GLUTAMATE SYNTHETASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 15391 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.620 REMARK 3 FREE R VALUE TEST SET COUNT : 711 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.9728 - 5.3836 1.00 3137 142 0.1826 0.2072 REMARK 3 2 5.3836 - 4.2744 1.00 2963 123 0.1866 0.2119 REMARK 3 3 4.2744 - 3.7344 1.00 2877 155 0.2305 0.2956 REMARK 3 4 3.7344 - 3.3932 1.00 2857 147 0.2784 0.3149 REMARK 3 5 3.3932 - 3.1500 1.00 2846 144 0.3510 0.4181 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.520 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 121.8 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 114.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2266 REMARK 3 ANGLE : 1.155 3067 REMARK 3 CHIRALITY : 0.065 358 REMARK 3 PLANARITY : 0.006 395 REMARK 3 DIHEDRAL : 10.681 1386 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZK6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1300007197. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15497 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.150 REMARK 200 RESOLUTION RANGE LOW (A) : 47.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 37.70 REMARK 200 R MERGE (I) : 0.16700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 38.20 REMARK 200 R MERGE FOR SHELL (I) : 2.94200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.0 REMARK 200 STARTING MODEL: 5ZCT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS-HCL (PH 7.8), 600MM SODIUM REMARK 280 FORMATE, 8% POLY-GAMMA-GLUTAMIC ACID 200-400, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.19033 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 112.38067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 56.19033 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 112.38067 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 56.19033 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 112.38067 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 56.19033 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 112.38067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -131.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -262.54400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 227.36977 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 227.36977 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 -262.54400 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 292 REMARK 465 GLU A 293 REMARK 465 TYR A 294 REMARK 465 CYS A 295 REMARK 465 LEU A 296 REMARK 465 LYS A 297 REMARK 465 THR A 298 REMARK 465 GLY A 299 REMARK 465 GLY A 300 REMARK 465 GLY A 301 REMARK 465 THR A 302 REMARK 465 LEU A 303 REMARK 465 VAL A 304 REMARK 465 PRO A 305 REMARK 465 ARG A 306 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 142 CB - CG - CD1 ANGL. DEV. = -10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 89 114.01 84.54 REMARK 500 ASP A 99 101.33 -57.14 REMARK 500 HIS A 121 -70.26 -107.21 REMARK 500 ASN A 171 18.59 84.70 REMARK 500 ALA A 200 139.73 -176.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 260 OE1 REMARK 620 2 ADP A1001 O3B 128.7 REMARK 620 3 ADP A1001 O2A 67.4 65.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1002 DBREF 5ZK6 A 1 300 UNP P0C0U4 RIMK_ECOLI 1 300 SEQADV 5ZK6 GLY A 301 UNP P0C0U4 EXPRESSION TAG SEQADV 5ZK6 THR A 302 UNP P0C0U4 EXPRESSION TAG SEQADV 5ZK6 LEU A 303 UNP P0C0U4 EXPRESSION TAG SEQADV 5ZK6 VAL A 304 UNP P0C0U4 EXPRESSION TAG SEQADV 5ZK6 PRO A 305 UNP P0C0U4 EXPRESSION TAG SEQADV 5ZK6 ARG A 306 UNP P0C0U4 EXPRESSION TAG SEQRES 1 A 306 MET LYS ILE ALA ILE LEU SER ARG ASP GLY THR LEU TYR SEQRES 2 A 306 SER CYS LYS ARG LEU ARG GLU ALA ALA ILE GLN ARG GLY SEQRES 3 A 306 HIS LEU VAL GLU ILE LEU ASP PRO LEU SER CYS TYR MET SEQRES 4 A 306 ASN ILE ASN PRO ALA ALA SER SER ILE HIS TYR LYS GLY SEQRES 5 A 306 ARG LYS LEU PRO HIS PHE ASP ALA VAL ILE PRO ARG ILE SEQRES 6 A 306 GLY THR ALA ILE THR PHE TYR GLY THR ALA ALA LEU ARG SEQRES 7 A 306 GLN PHE GLU MET LEU GLY SER TYR PRO LEU ASN GLU SER SEQRES 8 A 306 VAL ALA ILE ALA ARG ALA ARG ASP LYS LEU ARG SER MET SEQRES 9 A 306 GLN LEU LEU ALA ARG GLN GLY ILE ASP LEU PRO VAL THR SEQRES 10 A 306 GLY ILE ALA HIS SER PRO ASP ASP THR SER ASP LEU ILE SEQRES 11 A 306 ASP MET VAL GLY GLY ALA PRO LEU VAL VAL LYS LEU VAL SEQRES 12 A 306 GLU GLY THR GLN GLY ILE GLY VAL VAL LEU ALA GLU THR SEQRES 13 A 306 ARG GLN ALA ALA GLU SER VAL ILE ASP ALA PHE ARG GLY SEQRES 14 A 306 LEU ASN ALA HIS ILE LEU VAL GLN GLU TYR ILE LYS GLU SEQRES 15 A 306 ALA GLN GLY CYS ASP ILE ARG CYS LEU VAL VAL GLY ASP SEQRES 16 A 306 GLU VAL VAL ALA ALA ILE GLU ARG ARG ALA LYS GLU GLY SEQRES 17 A 306 ASP PHE ARG SER ASN LEU HIS ARG GLY GLY ALA ALA SER SEQRES 18 A 306 VAL ALA SER ILE THR PRO GLN GLU ARG GLU ILE ALA ILE SEQRES 19 A 306 LYS ALA ALA ARG THR MET ALA LEU ASP VAL ALA GLY VAL SEQRES 20 A 306 ASP ILE LEU ARG ALA ASN ARG GLY PRO LEU VAL MET GLU SEQRES 21 A 306 VAL ASN ALA SER PRO GLY LEU GLU GLY ILE GLU LYS THR SEQRES 22 A 306 THR GLY ILE ASP ILE ALA GLY LYS MET ILE ARG TRP ILE SEQRES 23 A 306 GLU ARG HIS ALA THR THR GLU TYR CYS LEU LYS THR GLY SEQRES 24 A 306 GLY GLY THR LEU VAL PRO ARG HET ADP A1001 27 HET MG A1002 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 MG MG 2+ HELIX 1 AA1 LEU A 12 GLN A 24 1 13 HELIX 2 AA2 ASP A 33 LEU A 35 5 3 HELIX 3 AA3 ILE A 69 LEU A 83 1 15 HELIX 4 AA4 GLU A 90 ASP A 99 1 10 HELIX 5 AA5 ASP A 99 GLN A 110 1 12 HELIX 6 AA6 ASP A 125 VAL A 133 1 9 HELIX 7 AA7 THR A 156 ARG A 168 1 13 HELIX 8 AA8 ILE A 180 GLN A 184 5 5 HELIX 9 AA9 THR A 226 MET A 240 1 15 HELIX 10 AB1 LEU A 267 GLY A 275 1 9 HELIX 11 AB2 ASP A 277 ALA A 290 1 14 SHEET 1 AA1 4 LEU A 28 LEU A 32 0 SHEET 2 AA1 4 LYS A 2 LEU A 6 1 N ILE A 5 O LEU A 32 SHEET 3 AA1 4 ALA A 60 PRO A 63 1 O ILE A 62 N LEU A 6 SHEET 4 AA1 4 TYR A 86 PRO A 87 1 O TYR A 86 N VAL A 61 SHEET 1 AA2 3 CYS A 37 MET A 39 0 SHEET 2 AA2 3 ILE A 48 TYR A 50 -1 O HIS A 49 N TYR A 38 SHEET 3 AA2 3 ARG A 53 LYS A 54 -1 O ARG A 53 N TYR A 50 SHEET 1 AA3 4 THR A 117 ALA A 120 0 SHEET 2 AA3 4 HIS A 173 GLU A 178 -1 O VAL A 176 N GLY A 118 SHEET 3 AA3 4 LEU A 138 GLU A 144 -1 N LYS A 141 O LEU A 175 SHEET 4 AA3 4 GLN A 147 ALA A 154 -1 O GLN A 147 N GLU A 144 SHEET 1 AA4 5 ALA A 219 VAL A 222 0 SHEET 2 AA4 5 GLU A 196 ARG A 204 -1 N GLU A 202 O SER A 221 SHEET 3 AA4 5 CYS A 186 VAL A 193 -1 N ASP A 187 O ARG A 203 SHEET 4 AA4 5 VAL A 244 ALA A 252 -1 O VAL A 247 N CYS A 190 SHEET 5 AA4 5 GLY A 255 ASN A 262 -1 O GLY A 255 N ALA A 252 LINK CB SER A 212 O3' ADP A1001 1555 1555 1.38 LINK OE1 GLU A 260 MG MG A1002 1555 1555 2.32 LINK O3B ADP A1001 MG MG A1002 1555 1555 2.48 LINK O2A ADP A1001 MG MG A1002 1555 1555 2.51 CISPEP 1 ASN A 42 PRO A 43 0 4.39 CISPEP 2 ALA A 136 PRO A 137 0 -4.08 SITE 1 AC1 16 LYS A 141 VAL A 151 GLN A 177 GLU A 178 SITE 2 AC1 16 TYR A 179 ILE A 180 ARG A 203 PHE A 210 SITE 3 AC1 16 ARG A 211 SER A 212 ASN A 213 ARG A 216 SITE 4 AC1 16 LEU A 250 MET A 259 GLU A 260 MG A1002 SITE 1 AC2 3 ASN A 213 GLU A 260 ADP A1001 CRYST1 131.272 131.272 168.571 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007618 0.004398 0.000000 0.00000 SCALE2 0.000000 0.008796 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005932 0.00000