data_5ZK9 # _entry.id 5ZK9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5ZK9 pdb_00005zk9 10.2210/pdb5zk9/pdb WWPDB D_1300007225 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5ZK9 _pdbx_database_status.recvd_initial_deposition_date 2018-03-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lama, D.' 1 ? 'Liberator, A.' 2 ? 'Frosi, Y.' 3 ? 'Nakhle, J.' 4 ? 'Tsomia, N.' 5 ? 'Bashir, T.' 6 ? 'Lane, D.P.' 7 ? 'Brown, C.J.' 8 ? 'Verma, C.S.' 9 ? 'Auvin, S.' 10 ? 'Ciesielski, F.' 11 ? 'Uhring, M.' 12 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Chem Sci' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-6520 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 2489 _citation.page_last 2500 _citation.title ;Structural insights reveal a recognition feature for tailoring hydrocarbon stapled-peptides against the eukaryotic translation initiation factor 4E protein. ; _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1039/c8sc03759k _citation.pdbx_database_id_PubMed 30881679 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lama, D.' 1 ? primary 'Liberatore, A.M.' 2 ? primary 'Frosi, Y.' 3 ? primary 'Nakhle, J.' 4 ? primary 'Tsomaia, N.' 5 ? primary 'Bashir, T.' 6 ? primary 'Lane, D.P.' 7 ? primary 'Brown, C.J.' 8 ? primary 'Verma, C.S.' 9 ? primary 'Auvin, S.' 10 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 122.72 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5ZK9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 91.420 _cell.length_a_esd ? _cell.length_b 38.080 _cell.length_b_esd ? _cell.length_c 78.490 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZK9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Eukaryotic translation initiation factor 4E' 22290.334 1 ? ? ? ? 2 polymer syn ACE-ARG-ILE-ILE-TYR-SER-ARG-MK8-GLN-LEU-LEU-MK8-LEU-LYS-NH2 1684.165 1 ? ? ? 'The acetylation (ACE) and amidation (NH2) are included in the SEQRES.' 3 non-polymer syn "7-METHYL-GUANOSINE-5'-TRIPHOSPHATE" 538.215 1 ? ? ? ? 4 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 2 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 water nat water 18.015 166 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'eIF4E,eIF-4F 25 kDa subunit,mRNA cap-binding protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEK NKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKER LGLPPKIVIGYQSHADTATKSGSTTKNRFVV ; ;MVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEK NKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKER LGLPPKIVIGYQSHADTATKSGSTTKNRFVV ; A ? 2 'polypeptide(L)' no yes '(ACE)RIIYSR(MK8)QLL(MK8)LK(NH2)' XRIIYSRLQLLLLKX B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 ALA n 1 4 ASN n 1 5 PRO n 1 6 GLU n 1 7 HIS n 1 8 TYR n 1 9 ILE n 1 10 LYS n 1 11 HIS n 1 12 PRO n 1 13 LEU n 1 14 GLN n 1 15 ASN n 1 16 ARG n 1 17 TRP n 1 18 ALA n 1 19 LEU n 1 20 TRP n 1 21 PHE n 1 22 PHE n 1 23 LYS n 1 24 ASN n 1 25 ASP n 1 26 LYS n 1 27 SER n 1 28 LYS n 1 29 THR n 1 30 TRP n 1 31 GLN n 1 32 ALA n 1 33 ASN n 1 34 LEU n 1 35 ARG n 1 36 LEU n 1 37 ILE n 1 38 SER n 1 39 LYS n 1 40 PHE n 1 41 ASP n 1 42 THR n 1 43 VAL n 1 44 GLU n 1 45 ASP n 1 46 PHE n 1 47 TRP n 1 48 ALA n 1 49 LEU n 1 50 TYR n 1 51 ASN n 1 52 HIS n 1 53 ILE n 1 54 GLN n 1 55 LEU n 1 56 SER n 1 57 SER n 1 58 ASN n 1 59 LEU n 1 60 MET n 1 61 PRO n 1 62 GLY n 1 63 CYS n 1 64 ASP n 1 65 TYR n 1 66 SER n 1 67 LEU n 1 68 PHE n 1 69 LYS n 1 70 ASP n 1 71 GLY n 1 72 ILE n 1 73 GLU n 1 74 PRO n 1 75 MET n 1 76 TRP n 1 77 GLU n 1 78 ASP n 1 79 GLU n 1 80 LYS n 1 81 ASN n 1 82 LYS n 1 83 ARG n 1 84 GLY n 1 85 GLY n 1 86 ARG n 1 87 TRP n 1 88 LEU n 1 89 ILE n 1 90 THR n 1 91 LEU n 1 92 ASN n 1 93 LYS n 1 94 GLN n 1 95 GLN n 1 96 ARG n 1 97 ARG n 1 98 SER n 1 99 ASP n 1 100 LEU n 1 101 ASP n 1 102 ARG n 1 103 PHE n 1 104 TRP n 1 105 LEU n 1 106 GLU n 1 107 THR n 1 108 LEU n 1 109 LEU n 1 110 CYS n 1 111 LEU n 1 112 ILE n 1 113 GLY n 1 114 GLU n 1 115 SER n 1 116 PHE n 1 117 ASP n 1 118 ASP n 1 119 TYR n 1 120 SER n 1 121 ASP n 1 122 ASP n 1 123 VAL n 1 124 CYS n 1 125 GLY n 1 126 ALA n 1 127 VAL n 1 128 VAL n 1 129 ASN n 1 130 VAL n 1 131 ARG n 1 132 ALA n 1 133 LYS n 1 134 GLY n 1 135 ASP n 1 136 LYS n 1 137 ILE n 1 138 ALA n 1 139 ILE n 1 140 TRP n 1 141 THR n 1 142 THR n 1 143 GLU n 1 144 CYS n 1 145 GLU n 1 146 ASN n 1 147 ARG n 1 148 GLU n 1 149 ALA n 1 150 VAL n 1 151 THR n 1 152 HIS n 1 153 ILE n 1 154 GLY n 1 155 ARG n 1 156 VAL n 1 157 TYR n 1 158 LYS n 1 159 GLU n 1 160 ARG n 1 161 LEU n 1 162 GLY n 1 163 LEU n 1 164 PRO n 1 165 PRO n 1 166 LYS n 1 167 ILE n 1 168 VAL n 1 169 ILE n 1 170 GLY n 1 171 TYR n 1 172 GLN n 1 173 SER n 1 174 HIS n 1 175 ALA n 1 176 ASP n 1 177 THR n 1 178 ALA n 1 179 THR n 1 180 LYS n 1 181 SER n 1 182 GLY n 1 183 SER n 1 184 THR n 1 185 THR n 1 186 LYS n 1 187 ASN n 1 188 ARG n 1 189 PHE n 1 190 VAL n 1 191 VAL n 2 1 ACE n 2 2 ARG n 2 3 ILE n 2 4 ILE n 2 5 TYR n 2 6 SER n 2 7 ARG n 2 8 MK8 n 2 9 GLN n 2 10 LEU n 2 11 LEU n 2 12 MK8 n 2 13 LEU n 2 14 LYS n 2 15 NH2 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 191 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'EIF4E, EIF4EL1, EIF4F' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 15 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP IF4E_HUMAN P06730 ? 1 ;VANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKN KRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERL GLPPKIVIGYQSHADTATKSGSTTKNRFVV ; 28 2 PDB 5ZK9 5ZK9 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5ZK9 A 2 ? 191 ? P06730 28 ? 217 ? 28 217 2 2 5ZK9 B 1 ? 15 ? 5ZK9 1 ? 15 ? 1 15 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 5ZK9 _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P06730 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 27 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MGP non-polymer . "7-METHYL-GUANOSINE-5'-TRIPHOSPHATE" ? 'C11 H19 N5 O14 P3 1' 538.215 MK8 'L-peptide linking' n 2-methyl-L-norleucine ? 'C7 H15 N O2' 145.199 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5ZK9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.40 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '12.5% pEG1000 w/v, 12.5% PEG3350 w/v, 12.5% MPD w/v, 0.1M MES/imidazole pH 6.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-06-27 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.983994 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.983994 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5ZK9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.76 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 22709 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.048 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.33 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.76 _reflns_shell.d_res_low 1.86 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.18 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs 11964 _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3574 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value 0.441 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.86 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.11 _refine.aniso_B[2][2] 0.07 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -0.59 _refine.B_iso_max ? _refine.B_iso_mean 23.414 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.949 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5ZK9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.76 _refine.ls_d_res_low 45.65 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 21571 _refine.ls_number_reflns_R_free 1136 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.92 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.17881 _refine.ls_R_factor_R_free 0.21150 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.17709 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4TPW _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.116 _refine.pdbx_overall_ESU_R_Free 0.112 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.399 _refine.overall_SU_ML 0.074 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1639 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 54 _refine_hist.number_atoms_solvent 166 _refine_hist.number_atoms_total 1859 _refine_hist.d_res_high 1.76 _refine_hist.d_res_low 45.65 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 0.019 1762 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 1636 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.684 1.987 2391 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.357 3.000 3785 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.526 5.000 199 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.805 23.256 86 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.071 15.000 308 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 13.680 15.000 15 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.084 0.200 251 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 0.020 1884 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 386 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 1.343 2.101 794 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.341 2.098 792 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.169 3.132 990 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.170 3.131 990 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 1.966 2.412 968 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.964 2.412 968 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 3.074 3.498 1397 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 5.070 24.992 2056 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 5.069 25.015 2057 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.757 _refine_ls_shell.d_res_low 1.803 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.number_reflns_R_work 1512 _refine_ls_shell.percent_reflns_obs 94.87 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.473 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.464 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5ZK9 _struct.title 'Stapled-peptides tailored against initiation of translation' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5ZK9 _struct_keywords.text 'Cap dependent Translation, RNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 29 ? ALA A 32 ? THR A 55 ALA A 58 5 ? 4 HELX_P HELX_P2 AA2 VAL A 43 ? ILE A 53 ? VAL A 69 ILE A 79 1 ? 11 HELX_P HELX_P3 AA3 LEU A 55 ? LEU A 59 ? LEU A 81 LEU A 85 5 ? 5 HELX_P HELX_P4 AA4 GLN A 94 ? ASP A 99 ? GLN A 120 ASP A 125 1 ? 6 HELX_P HELX_P5 AA5 ASP A 99 ? GLY A 113 ? ASP A 125 GLY A 139 1 ? 15 HELX_P HELX_P6 AA6 PHE A 116 ? ASP A 121 ? PHE A 142 ASP A 147 5 ? 6 HELX_P HELX_P7 AA7 ASN A 146 ? GLY A 162 ? ASN A 172 GLY A 188 1 ? 17 HELX_P HELX_P8 AA8 HIS A 174 ? THR A 179 ? HIS A 200 THR A 205 1 ? 6 HELX_P HELX_P9 AA9 SER B 6 ? LEU B 13 ? SER B 6 LEU B 13 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B ACE 1 C ? ? ? 1_555 B ARG 2 N ? ? B ACE 1 B ARG 2 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale2 covale both ? B ARG 7 C ? ? ? 1_555 B MK8 8 N ? ? B ARG 7 B MK8 8 1_555 ? ? ? ? ? ? ? 1.358 ? ? covale3 covale both ? B MK8 8 C ? ? ? 1_555 B GLN 9 N ? ? B MK8 8 B GLN 9 1_555 ? ? ? ? ? ? ? 1.276 ? ? covale4 covale both ? B LEU 11 C ? ? ? 1_555 B MK8 12 N ? ? B LEU 11 B MK8 12 1_555 ? ? ? ? ? ? ? 1.364 ? ? covale5 covale both ? B MK8 12 C ? ? ? 1_555 B LEU 13 N ? ? B MK8 12 B LEU 13 1_555 ? ? ? ? ? ? ? 1.274 ? ? covale6 covale both ? B LYS 14 C ? ? ? 1_555 B NH2 15 N ? ? B LYS 14 B NH2 15 1_555 ? ? ? ? ? ? ? 1.423 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 34 ? THR A 42 ? LEU A 60 THR A 68 AA1 2 PRO A 12 ? PHE A 22 ? PRO A 38 PHE A 48 AA1 3 ASP A 64 ? LYS A 69 ? ASP A 90 LYS A 95 AA1 4 VAL A 123 ? ASN A 129 ? VAL A 149 ASN A 155 AA1 5 LYS A 136 ? THR A 141 ? LYS A 162 THR A 167 AA1 6 GLY A 85 ? THR A 90 ? GLY A 111 THR A 116 AA1 7 GLY A 170 ? SER A 173 ? GLY A 196 SER A 199 AA1 8 PHE A 189 ? VAL A 190 ? PHE A 215 VAL A 216 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ILE A 37 ? O ILE A 63 N LEU A 19 ? N LEU A 45 AA1 2 3 N ALA A 18 ? N ALA A 44 O PHE A 68 ? O PHE A 94 AA1 3 4 N TYR A 65 ? N TYR A 91 O VAL A 128 ? O VAL A 154 AA1 4 5 N CYS A 124 ? N CYS A 150 O TRP A 140 ? O TRP A 166 AA1 5 6 O ILE A 137 ? O ILE A 163 N ILE A 89 ? N ILE A 115 AA1 6 7 N LEU A 88 ? N LEU A 114 O GLY A 170 ? O GLY A 196 AA1 7 8 N TYR A 171 ? N TYR A 197 O PHE A 189 ? O PHE A 215 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MGP 1001 ? 16 'binding site for residue MGP A 1001' AC2 Software A PEG 1002 ? 5 'binding site for residue PEG A 1002' AC3 Software A PEG 1003 ? 9 'binding site for residue PEG A 1003' AC4 Software A GOL 1004 ? 8 'binding site for residue GOL A 1004' AC5 Software B MK8 8 ? 8 'binding site for residues MK8 B 8 and MK8 B 12' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 LYS A 28 ? LYS A 54 . ? 2_557 ? 2 AC1 16 THR A 29 ? THR A 55 . ? 2_557 ? 3 AC1 16 TRP A 30 ? TRP A 56 . ? 1_555 ? 4 AC1 16 MET A 75 ? MET A 101 . ? 1_555 ? 5 AC1 16 TRP A 76 ? TRP A 102 . ? 1_555 ? 6 AC1 16 GLU A 77 ? GLU A 103 . ? 1_555 ? 7 AC1 16 ARG A 131 ? ARG A 157 . ? 1_555 ? 8 AC1 16 LYS A 136 ? LYS A 162 . ? 1_555 ? 9 AC1 16 HOH G . ? HOH A 1102 . ? 1_555 ? 10 AC1 16 HOH G . ? HOH A 1104 . ? 1_555 ? 11 AC1 16 HOH G . ? HOH A 1118 . ? 1_555 ? 12 AC1 16 HOH G . ? HOH A 1126 . ? 1_555 ? 13 AC1 16 HOH G . ? HOH A 1131 . ? 1_555 ? 14 AC1 16 HOH G . ? HOH A 1136 . ? 1_555 ? 15 AC1 16 HOH G . ? HOH A 1154 . ? 1_555 ? 16 AC1 16 HOH G . ? HOH A 1197 . ? 1_555 ? 17 AC2 5 THR A 90 ? THR A 116 . ? 1_555 ? 18 AC2 5 GLN A 95 ? GLN A 121 . ? 1_555 ? 19 AC2 5 VAL A 168 ? VAL A 194 . ? 1_555 ? 20 AC2 5 ILE A 169 ? ILE A 195 . ? 1_555 ? 21 AC2 5 HOH G . ? HOH A 1117 . ? 1_555 ? 22 AC3 9 GLN A 14 ? GLN A 40 . ? 1_555 ? 23 AC3 9 ASN A 15 ? ASN A 41 . ? 1_555 ? 24 AC3 9 ASN A 92 ? ASN A 118 . ? 1_545 ? 25 AC3 9 GLN A 95 ? GLN A 121 . ? 1_545 ? 26 AC3 9 SER A 98 ? SER A 124 . ? 1_545 ? 27 AC3 9 ASP A 121 ? ASP A 147 . ? 1_555 ? 28 AC3 9 HOH G . ? HOH A 1151 . ? 1_555 ? 29 AC3 9 HOH G . ? HOH A 1164 . ? 1_555 ? 30 AC3 9 ARG B 2 ? ARG B 2 . ? 1_555 ? 31 AC4 8 ARG A 16 ? ARG A 42 . ? 1_565 ? 32 AC4 8 ASP A 70 ? ASP A 96 . ? 1_565 ? 33 AC4 8 LYS A 93 ? LYS A 119 . ? 1_555 ? 34 AC4 8 GLN A 94 ? GLN A 120 . ? 1_555 ? 35 AC4 8 ARG A 96 ? ARG A 122 . ? 1_555 ? 36 AC4 8 ARG A 97 ? ARG A 123 . ? 1_555 ? 37 AC4 8 HOH G . ? HOH A 1113 . ? 1_555 ? 38 AC4 8 HOH G . ? HOH A 1123 . ? 1_555 ? 39 AC5 8 SER B 6 ? SER B 6 . ? 1_555 ? 40 AC5 8 ARG B 7 ? ARG B 7 . ? 1_555 ? 41 AC5 8 GLN B 9 ? GLN B 9 . ? 1_555 ? 42 AC5 8 LEU B 10 ? LEU B 10 . ? 1_555 ? 43 AC5 8 LEU B 11 ? LEU B 11 . ? 1_555 ? 44 AC5 8 LEU B 13 ? LEU B 13 . ? 1_555 ? 45 AC5 8 LYS B 14 ? LYS B 14 . ? 1_555 ? 46 AC5 8 NH2 B 15 ? NH2 B 15 . ? 1_555 ? # _atom_sites.entry_id 5ZK9 _atom_sites.fract_transf_matrix[1][1] 0.010939 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007028 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026261 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015143 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 27 ? ? ? A . n A 1 2 VAL 2 28 ? ? ? A . n A 1 3 ALA 3 29 ? ? ? A . n A 1 4 ASN 4 30 ? ? ? A . n A 1 5 PRO 5 31 31 PRO PRO A . n A 1 6 GLU 6 32 32 GLU GLU A . n A 1 7 HIS 7 33 33 HIS HIS A . n A 1 8 TYR 8 34 34 TYR TYR A . n A 1 9 ILE 9 35 35 ILE ILE A . n A 1 10 LYS 10 36 36 LYS LYS A . n A 1 11 HIS 11 37 37 HIS HIS A . n A 1 12 PRO 12 38 38 PRO PRO A . n A 1 13 LEU 13 39 39 LEU LEU A . n A 1 14 GLN 14 40 40 GLN GLN A . n A 1 15 ASN 15 41 41 ASN ASN A . n A 1 16 ARG 16 42 42 ARG ARG A . n A 1 17 TRP 17 43 43 TRP TRP A . n A 1 18 ALA 18 44 44 ALA ALA A . n A 1 19 LEU 19 45 45 LEU LEU A . n A 1 20 TRP 20 46 46 TRP TRP A . n A 1 21 PHE 21 47 47 PHE PHE A . n A 1 22 PHE 22 48 48 PHE PHE A . n A 1 23 LYS 23 49 49 LYS LYS A . n A 1 24 ASN 24 50 50 ASN ASN A . n A 1 25 ASP 25 51 51 ASP ASP A . n A 1 26 LYS 26 52 52 LYS LYS A . n A 1 27 SER 27 53 53 SER SER A . n A 1 28 LYS 28 54 54 LYS LYS A . n A 1 29 THR 29 55 55 THR THR A . n A 1 30 TRP 30 56 56 TRP TRP A . n A 1 31 GLN 31 57 57 GLN GLN A . n A 1 32 ALA 32 58 58 ALA ALA A . n A 1 33 ASN 33 59 59 ASN ASN A . n A 1 34 LEU 34 60 60 LEU LEU A . n A 1 35 ARG 35 61 61 ARG ARG A . n A 1 36 LEU 36 62 62 LEU LEU A . n A 1 37 ILE 37 63 63 ILE ILE A . n A 1 38 SER 38 64 64 SER SER A . n A 1 39 LYS 39 65 65 LYS LYS A . n A 1 40 PHE 40 66 66 PHE PHE A . n A 1 41 ASP 41 67 67 ASP ASP A . n A 1 42 THR 42 68 68 THR THR A . n A 1 43 VAL 43 69 69 VAL VAL A . n A 1 44 GLU 44 70 70 GLU GLU A . n A 1 45 ASP 45 71 71 ASP ASP A . n A 1 46 PHE 46 72 72 PHE PHE A . n A 1 47 TRP 47 73 73 TRP TRP A . n A 1 48 ALA 48 74 74 ALA ALA A . n A 1 49 LEU 49 75 75 LEU LEU A . n A 1 50 TYR 50 76 76 TYR TYR A . n A 1 51 ASN 51 77 77 ASN ASN A . n A 1 52 HIS 52 78 78 HIS HIS A . n A 1 53 ILE 53 79 79 ILE ILE A . n A 1 54 GLN 54 80 80 GLN GLN A . n A 1 55 LEU 55 81 81 LEU LEU A . n A 1 56 SER 56 82 82 SER SER A . n A 1 57 SER 57 83 83 SER SER A . n A 1 58 ASN 58 84 84 ASN ASN A . n A 1 59 LEU 59 85 85 LEU LEU A . n A 1 60 MET 60 86 86 MET MET A . n A 1 61 PRO 61 87 87 PRO PRO A . n A 1 62 GLY 62 88 88 GLY GLY A . n A 1 63 CYS 63 89 89 CYS CYS A . n A 1 64 ASP 64 90 90 ASP ASP A . n A 1 65 TYR 65 91 91 TYR TYR A . n A 1 66 SER 66 92 92 SER SER A . n A 1 67 LEU 67 93 93 LEU LEU A . n A 1 68 PHE 68 94 94 PHE PHE A . n A 1 69 LYS 69 95 95 LYS LYS A . n A 1 70 ASP 70 96 96 ASP ASP A . n A 1 71 GLY 71 97 97 GLY GLY A . n A 1 72 ILE 72 98 98 ILE ILE A . n A 1 73 GLU 73 99 99 GLU GLU A . n A 1 74 PRO 74 100 100 PRO PRO A . n A 1 75 MET 75 101 101 MET MET A . n A 1 76 TRP 76 102 102 TRP TRP A . n A 1 77 GLU 77 103 103 GLU GLU A . n A 1 78 ASP 78 104 104 ASP ASP A . n A 1 79 GLU 79 105 105 GLU GLU A . n A 1 80 LYS 80 106 106 LYS LYS A . n A 1 81 ASN 81 107 107 ASN ASN A . n A 1 82 LYS 82 108 108 LYS LYS A . n A 1 83 ARG 83 109 109 ARG ARG A . n A 1 84 GLY 84 110 110 GLY GLY A . n A 1 85 GLY 85 111 111 GLY GLY A . n A 1 86 ARG 86 112 112 ARG ARG A . n A 1 87 TRP 87 113 113 TRP TRP A . n A 1 88 LEU 88 114 114 LEU LEU A . n A 1 89 ILE 89 115 115 ILE ILE A . n A 1 90 THR 90 116 116 THR THR A . n A 1 91 LEU 91 117 117 LEU LEU A . n A 1 92 ASN 92 118 118 ASN ASN A . n A 1 93 LYS 93 119 119 LYS LYS A . n A 1 94 GLN 94 120 120 GLN GLN A . n A 1 95 GLN 95 121 121 GLN GLN A . n A 1 96 ARG 96 122 122 ARG ARG A . n A 1 97 ARG 97 123 123 ARG ARG A . n A 1 98 SER 98 124 124 SER SER A . n A 1 99 ASP 99 125 125 ASP ASP A . n A 1 100 LEU 100 126 126 LEU LEU A . n A 1 101 ASP 101 127 127 ASP ASP A . n A 1 102 ARG 102 128 128 ARG ARG A . n A 1 103 PHE 103 129 129 PHE PHE A . n A 1 104 TRP 104 130 130 TRP TRP A . n A 1 105 LEU 105 131 131 LEU LEU A . n A 1 106 GLU 106 132 132 GLU GLU A . n A 1 107 THR 107 133 133 THR THR A . n A 1 108 LEU 108 134 134 LEU LEU A . n A 1 109 LEU 109 135 135 LEU LEU A . n A 1 110 CYS 110 136 136 CYS CYS A . n A 1 111 LEU 111 137 137 LEU LEU A . n A 1 112 ILE 112 138 138 ILE ILE A . n A 1 113 GLY 113 139 139 GLY GLY A . n A 1 114 GLU 114 140 140 GLU GLU A . n A 1 115 SER 115 141 141 SER SER A . n A 1 116 PHE 116 142 142 PHE PHE A . n A 1 117 ASP 117 143 143 ASP ASP A . n A 1 118 ASP 118 144 144 ASP ASP A . n A 1 119 TYR 119 145 145 TYR TYR A . n A 1 120 SER 120 146 146 SER SER A . n A 1 121 ASP 121 147 147 ASP ASP A . n A 1 122 ASP 122 148 148 ASP ASP A . n A 1 123 VAL 123 149 149 VAL VAL A . n A 1 124 CYS 124 150 150 CYS CYS A . n A 1 125 GLY 125 151 151 GLY GLY A . n A 1 126 ALA 126 152 152 ALA ALA A . n A 1 127 VAL 127 153 153 VAL VAL A . n A 1 128 VAL 128 154 154 VAL VAL A . n A 1 129 ASN 129 155 155 ASN ASN A . n A 1 130 VAL 130 156 156 VAL VAL A . n A 1 131 ARG 131 157 157 ARG ARG A . n A 1 132 ALA 132 158 158 ALA ALA A . n A 1 133 LYS 133 159 159 LYS LYS A . n A 1 134 GLY 134 160 160 GLY GLY A . n A 1 135 ASP 135 161 161 ASP ASP A . n A 1 136 LYS 136 162 162 LYS LYS A . n A 1 137 ILE 137 163 163 ILE ILE A . n A 1 138 ALA 138 164 164 ALA ALA A . n A 1 139 ILE 139 165 165 ILE ILE A . n A 1 140 TRP 140 166 166 TRP TRP A . n A 1 141 THR 141 167 167 THR THR A . n A 1 142 THR 142 168 168 THR THR A . n A 1 143 GLU 143 169 169 GLU GLU A . n A 1 144 CYS 144 170 170 CYS CYS A . n A 1 145 GLU 145 171 171 GLU GLU A . n A 1 146 ASN 146 172 172 ASN ASN A . n A 1 147 ARG 147 173 173 ARG ARG A . n A 1 148 GLU 148 174 174 GLU GLU A . n A 1 149 ALA 149 175 175 ALA ALA A . n A 1 150 VAL 150 176 176 VAL VAL A . n A 1 151 THR 151 177 177 THR THR A . n A 1 152 HIS 152 178 178 HIS HIS A . n A 1 153 ILE 153 179 179 ILE ILE A . n A 1 154 GLY 154 180 180 GLY GLY A . n A 1 155 ARG 155 181 181 ARG ARG A . n A 1 156 VAL 156 182 182 VAL VAL A . n A 1 157 TYR 157 183 183 TYR TYR A . n A 1 158 LYS 158 184 184 LYS LYS A . n A 1 159 GLU 159 185 185 GLU GLU A . n A 1 160 ARG 160 186 186 ARG ARG A . n A 1 161 LEU 161 187 187 LEU LEU A . n A 1 162 GLY 162 188 188 GLY GLY A . n A 1 163 LEU 163 189 189 LEU LEU A . n A 1 164 PRO 164 190 190 PRO PRO A . n A 1 165 PRO 165 191 191 PRO PRO A . n A 1 166 LYS 166 192 192 LYS LYS A . n A 1 167 ILE 167 193 193 ILE ILE A . n A 1 168 VAL 168 194 194 VAL VAL A . n A 1 169 ILE 169 195 195 ILE ILE A . n A 1 170 GLY 170 196 196 GLY GLY A . n A 1 171 TYR 171 197 197 TYR TYR A . n A 1 172 GLN 172 198 198 GLN GLN A . n A 1 173 SER 173 199 199 SER SER A . n A 1 174 HIS 174 200 200 HIS HIS A . n A 1 175 ALA 175 201 201 ALA ALA A . n A 1 176 ASP 176 202 202 ASP ASP A . n A 1 177 THR 177 203 203 THR THR A . n A 1 178 ALA 178 204 204 ALA ALA A . n A 1 179 THR 179 205 205 THR THR A . n A 1 180 LYS 180 206 206 LYS LYS A . n A 1 181 SER 181 207 ? ? ? A . n A 1 182 GLY 182 208 ? ? ? A . n A 1 183 SER 183 209 ? ? ? A . n A 1 184 THR 184 210 ? ? ? A . n A 1 185 THR 185 211 211 THR THR A . n A 1 186 LYS 186 212 212 LYS LYS A . n A 1 187 ASN 187 213 213 ASN ASN A . n A 1 188 ARG 188 214 214 ARG ARG A . n A 1 189 PHE 189 215 215 PHE PHE A . n A 1 190 VAL 190 216 216 VAL VAL A . n A 1 191 VAL 191 217 217 VAL VAL A . n B 2 1 ACE 1 1 1 ACE ACE B . n B 2 2 ARG 2 2 2 ARG ARG B . n B 2 3 ILE 3 3 3 ILE ILE B . n B 2 4 ILE 4 4 4 ILE ILE B . n B 2 5 TYR 5 5 5 TYR TYR B . n B 2 6 SER 6 6 6 SER SER B . n B 2 7 ARG 7 7 7 ARG ARG B . n B 2 8 MK8 8 8 8 MK8 MK8 B . n B 2 9 GLN 9 9 9 GLN GLN B . n B 2 10 LEU 10 10 10 LEU LEU B . n B 2 11 LEU 11 11 11 LEU LEU B . n B 2 12 MK8 12 12 12 MK8 MK8 B . n B 2 13 LEU 13 13 13 LEU LEU B . n B 2 14 LYS 14 14 14 LYS LYS B . n B 2 15 NH2 15 15 15 NH2 NME B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MGP 1 1001 1001 MGP MGT A . D 4 PEG 1 1002 1 PEG PEG A . E 4 PEG 1 1003 3 PEG PEG A . F 5 GOL 1 1004 3 GOL GOL A . G 6 HOH 1 1101 211 HOH HOH A . G 6 HOH 2 1102 182 HOH HOH A . G 6 HOH 3 1103 151 HOH HOH A . G 6 HOH 4 1104 141 HOH HOH A . G 6 HOH 5 1105 173 HOH HOH A . G 6 HOH 6 1106 155 HOH HOH A . G 6 HOH 7 1107 82 HOH HOH A . G 6 HOH 8 1108 42 HOH HOH A . G 6 HOH 9 1109 60 HOH HOH A . G 6 HOH 10 1110 40 HOH HOH A . G 6 HOH 11 1111 85 HOH HOH A . G 6 HOH 12 1112 83 HOH HOH A . G 6 HOH 13 1113 218 HOH HOH A . G 6 HOH 14 1114 92 HOH HOH A . G 6 HOH 15 1115 71 HOH HOH A . G 6 HOH 16 1116 150 HOH HOH A . G 6 HOH 17 1117 26 HOH HOH A . G 6 HOH 18 1118 183 HOH HOH A . G 6 HOH 19 1119 121 HOH HOH A . G 6 HOH 20 1120 20 HOH HOH A . G 6 HOH 21 1121 69 HOH HOH A . G 6 HOH 22 1122 19 HOH HOH A . G 6 HOH 23 1123 97 HOH HOH A . G 6 HOH 24 1124 171 HOH HOH A . G 6 HOH 25 1125 17 HOH HOH A . G 6 HOH 26 1126 77 HOH HOH A . G 6 HOH 27 1127 94 HOH HOH A . G 6 HOH 28 1128 33 HOH HOH A . G 6 HOH 29 1129 58 HOH HOH A . G 6 HOH 30 1130 146 HOH HOH A . G 6 HOH 31 1131 154 HOH HOH A . G 6 HOH 32 1132 41 HOH HOH A . G 6 HOH 33 1133 6 HOH HOH A . G 6 HOH 34 1134 64 HOH HOH A . G 6 HOH 35 1135 46 HOH HOH A . G 6 HOH 36 1136 8 HOH HOH A . G 6 HOH 37 1137 113 HOH HOH A . G 6 HOH 38 1138 215 HOH HOH A . G 6 HOH 39 1139 118 HOH HOH A . G 6 HOH 40 1140 125 HOH HOH A . G 6 HOH 41 1141 38 HOH HOH A . G 6 HOH 42 1142 158 HOH HOH A . G 6 HOH 43 1143 32 HOH HOH A . G 6 HOH 44 1144 68 HOH HOH A . G 6 HOH 45 1145 75 HOH HOH A . G 6 HOH 46 1146 7 HOH HOH A . G 6 HOH 47 1147 62 HOH HOH A . G 6 HOH 48 1148 70 HOH HOH A . G 6 HOH 49 1149 43 HOH HOH A . G 6 HOH 50 1150 21 HOH HOH A . G 6 HOH 51 1151 159 HOH HOH A . G 6 HOH 52 1152 24 HOH HOH A . G 6 HOH 53 1153 56 HOH HOH A . G 6 HOH 54 1154 138 HOH HOH A . G 6 HOH 55 1155 50 HOH HOH A . G 6 HOH 56 1156 45 HOH HOH A . G 6 HOH 57 1157 13 HOH HOH A . G 6 HOH 58 1158 1 HOH HOH A . G 6 HOH 59 1159 67 HOH HOH A . G 6 HOH 60 1160 16 HOH HOH A . G 6 HOH 61 1161 104 HOH HOH A . G 6 HOH 62 1162 35 HOH HOH A . G 6 HOH 63 1163 2 HOH HOH A . G 6 HOH 64 1164 79 HOH HOH A . G 6 HOH 65 1165 15 HOH HOH A . G 6 HOH 66 1166 31 HOH HOH A . G 6 HOH 67 1167 149 HOH HOH A . G 6 HOH 68 1168 3 HOH HOH A . G 6 HOH 69 1169 78 HOH HOH A . G 6 HOH 70 1170 66 HOH HOH A . G 6 HOH 71 1171 54 HOH HOH A . G 6 HOH 72 1172 14 HOH HOH A . G 6 HOH 73 1173 5 HOH HOH A . G 6 HOH 74 1174 99 HOH HOH A . G 6 HOH 75 1175 63 HOH HOH A . G 6 HOH 76 1176 44 HOH HOH A . G 6 HOH 77 1177 39 HOH HOH A . G 6 HOH 78 1178 57 HOH HOH A . G 6 HOH 79 1179 74 HOH HOH A . G 6 HOH 80 1180 142 HOH HOH A . G 6 HOH 81 1181 167 HOH HOH A . G 6 HOH 82 1182 153 HOH HOH A . G 6 HOH 83 1183 9 HOH HOH A . G 6 HOH 84 1184 73 HOH HOH A . G 6 HOH 85 1185 55 HOH HOH A . G 6 HOH 86 1186 124 HOH HOH A . G 6 HOH 87 1187 72 HOH HOH A . G 6 HOH 88 1188 98 HOH HOH A . G 6 HOH 89 1189 10 HOH HOH A . G 6 HOH 90 1190 37 HOH HOH A . G 6 HOH 91 1191 95 HOH HOH A . G 6 HOH 92 1192 27 HOH HOH A . G 6 HOH 93 1193 36 HOH HOH A . G 6 HOH 94 1194 86 HOH HOH A . G 6 HOH 95 1195 76 HOH HOH A . G 6 HOH 96 1196 111 HOH HOH A . G 6 HOH 97 1197 145 HOH HOH A . G 6 HOH 98 1198 220 HOH HOH A . G 6 HOH 99 1199 23 HOH HOH A . G 6 HOH 100 1200 34 HOH HOH A . G 6 HOH 101 1201 90 HOH HOH A . G 6 HOH 102 1202 219 HOH HOH A . G 6 HOH 103 1203 53 HOH HOH A . G 6 HOH 104 1204 181 HOH HOH A . G 6 HOH 105 1205 28 HOH HOH A . G 6 HOH 106 1206 137 HOH HOH A . G 6 HOH 107 1207 87 HOH HOH A . G 6 HOH 108 1208 172 HOH HOH A . G 6 HOH 109 1209 106 HOH HOH A . G 6 HOH 110 1210 168 HOH HOH A . G 6 HOH 111 1211 109 HOH HOH A . G 6 HOH 112 1212 22 HOH HOH A . G 6 HOH 113 1213 47 HOH HOH A . G 6 HOH 114 1214 12 HOH HOH A . G 6 HOH 115 1215 81 HOH HOH A . G 6 HOH 116 1216 30 HOH HOH A . G 6 HOH 117 1217 25 HOH HOH A . G 6 HOH 118 1218 29 HOH HOH A . G 6 HOH 119 1219 18 HOH HOH A . G 6 HOH 120 1220 51 HOH HOH A . G 6 HOH 121 1221 221 HOH HOH A . G 6 HOH 122 1222 200 HOH HOH A . G 6 HOH 123 1223 48 HOH HOH A . G 6 HOH 124 1224 4 HOH HOH A . G 6 HOH 125 1225 114 HOH HOH A . G 6 HOH 126 1226 49 HOH HOH A . G 6 HOH 127 1227 180 HOH HOH A . G 6 HOH 128 1228 93 HOH HOH A . G 6 HOH 129 1229 135 HOH HOH A . G 6 HOH 130 1230 133 HOH HOH A . G 6 HOH 131 1231 217 HOH HOH A . G 6 HOH 132 1232 11 HOH HOH A . G 6 HOH 133 1233 176 HOH HOH A . G 6 HOH 134 1234 130 HOH HOH A . G 6 HOH 135 1235 174 HOH HOH A . G 6 HOH 136 1236 165 HOH HOH A . G 6 HOH 137 1237 184 HOH HOH A . G 6 HOH 138 1238 207 HOH HOH A . G 6 HOH 139 1239 101 HOH HOH A . G 6 HOH 140 1240 96 HOH HOH A . G 6 HOH 141 1241 157 HOH HOH A . G 6 HOH 142 1242 122 HOH HOH A . G 6 HOH 143 1243 132 HOH HOH A . G 6 HOH 144 1244 203 HOH HOH A . G 6 HOH 145 1245 65 HOH HOH A . G 6 HOH 146 1246 179 HOH HOH A . G 6 HOH 147 1247 148 HOH HOH A . G 6 HOH 148 1248 206 HOH HOH A . G 6 HOH 149 1249 119 HOH HOH A . G 6 HOH 150 1250 136 HOH HOH A . G 6 HOH 151 1251 100 HOH HOH A . G 6 HOH 152 1252 131 HOH HOH A . G 6 HOH 153 1253 163 HOH HOH A . G 6 HOH 154 1254 108 HOH HOH A . G 6 HOH 155 1255 103 HOH HOH A . H 6 HOH 1 101 84 HOH HOH B . H 6 HOH 2 102 139 HOH HOH B . H 6 HOH 3 103 107 HOH HOH B . H 6 HOH 4 104 52 HOH HOH B . H 6 HOH 5 105 61 HOH HOH B . H 6 HOH 6 106 170 HOH HOH B . H 6 HOH 7 107 80 HOH HOH B . H 6 HOH 8 108 198 HOH HOH B . H 6 HOH 9 109 178 HOH HOH B . H 6 HOH 10 110 214 HOH HOH B . H 6 HOH 11 111 210 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2910 ? 1 MORE -4 ? 1 'SSA (A^2)' 10720 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 1254 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-02-20 2 'Structure model' 1 1 2019-04-03 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_id_ISSN' 2 2 'Structure model' '_citation.journal_volume' 3 2 'Structure model' '_citation.page_first' 4 2 'Structure model' '_citation.page_last' 5 2 'Structure model' '_citation.pdbx_database_id_PubMed' 6 2 'Structure model' '_citation.title' 7 2 'Structure model' '_citation_author.name' 8 3 'Structure model' '_database_2.pdbx_DOI' 9 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0189 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.compound_details ? _pdbx_entry_details.entry_id 5ZK9 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;AUTHORS STATE THAT THE CHAIN B IS A HYBRID SEQUENCE WHICH IS BASED ON THE EIF4E INTERACTION SEQUENCE IN EIF4G (Q04637). IT SHOULD CORRESPOND TO THE FOLLOWING RESIDUES 608-620. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 CE _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 MK8 _pdbx_validate_close_contact.auth_seq_id_1 8 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 CE _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 MK8 _pdbx_validate_close_contact.auth_seq_id_2 12 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.35 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 67 ? ? -143.64 25.57 2 1 ASP A 143 ? ? 44.13 -118.77 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 27 ? A MET 1 2 1 Y 1 A VAL 28 ? A VAL 2 3 1 Y 1 A ALA 29 ? A ALA 3 4 1 Y 1 A ASN 30 ? A ASN 4 5 1 Y 1 A SER 207 ? A SER 181 6 1 Y 1 A GLY 208 ? A GLY 182 7 1 Y 1 A SER 209 ? A SER 183 8 1 Y 1 A THR 210 ? A THR 184 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 GOL C1 C N N 144 GOL O1 O N N 145 GOL C2 C N N 146 GOL O2 O N N 147 GOL C3 C N N 148 GOL O3 O N N 149 GOL H11 H N N 150 GOL H12 H N N 151 GOL HO1 H N N 152 GOL H2 H N N 153 GOL HO2 H N N 154 GOL H31 H N N 155 GOL H32 H N N 156 GOL HO3 H N N 157 HIS N N N N 158 HIS CA C N S 159 HIS C C N N 160 HIS O O N N 161 HIS CB C N N 162 HIS CG C Y N 163 HIS ND1 N Y N 164 HIS CD2 C Y N 165 HIS CE1 C Y N 166 HIS NE2 N Y N 167 HIS OXT O N N 168 HIS H H N N 169 HIS H2 H N N 170 HIS HA H N N 171 HIS HB2 H N N 172 HIS HB3 H N N 173 HIS HD1 H N N 174 HIS HD2 H N N 175 HIS HE1 H N N 176 HIS HE2 H N N 177 HIS HXT H N N 178 HOH O O N N 179 HOH H1 H N N 180 HOH H2 H N N 181 ILE N N N N 182 ILE CA C N S 183 ILE C C N N 184 ILE O O N N 185 ILE CB C N S 186 ILE CG1 C N N 187 ILE CG2 C N N 188 ILE CD1 C N N 189 ILE OXT O N N 190 ILE H H N N 191 ILE H2 H N N 192 ILE HA H N N 193 ILE HB H N N 194 ILE HG12 H N N 195 ILE HG13 H N N 196 ILE HG21 H N N 197 ILE HG22 H N N 198 ILE HG23 H N N 199 ILE HD11 H N N 200 ILE HD12 H N N 201 ILE HD13 H N N 202 ILE HXT H N N 203 LEU N N N N 204 LEU CA C N S 205 LEU C C N N 206 LEU O O N N 207 LEU CB C N N 208 LEU CG C N N 209 LEU CD1 C N N 210 LEU CD2 C N N 211 LEU OXT O N N 212 LEU H H N N 213 LEU H2 H N N 214 LEU HA H N N 215 LEU HB2 H N N 216 LEU HB3 H N N 217 LEU HG H N N 218 LEU HD11 H N N 219 LEU HD12 H N N 220 LEU HD13 H N N 221 LEU HD21 H N N 222 LEU HD22 H N N 223 LEU HD23 H N N 224 LEU HXT H N N 225 LYS N N N N 226 LYS CA C N S 227 LYS C C N N 228 LYS O O N N 229 LYS CB C N N 230 LYS CG C N N 231 LYS CD C N N 232 LYS CE C N N 233 LYS NZ N N N 234 LYS OXT O N N 235 LYS H H N N 236 LYS H2 H N N 237 LYS HA H N N 238 LYS HB2 H N N 239 LYS HB3 H N N 240 LYS HG2 H N N 241 LYS HG3 H N N 242 LYS HD2 H N N 243 LYS HD3 H N N 244 LYS HE2 H N N 245 LYS HE3 H N N 246 LYS HZ1 H N N 247 LYS HZ2 H N N 248 LYS HZ3 H N N 249 LYS HXT H N N 250 MET N N N N 251 MET CA C N S 252 MET C C N N 253 MET O O N N 254 MET CB C N N 255 MET CG C N N 256 MET SD S N N 257 MET CE C N N 258 MET OXT O N N 259 MET H H N N 260 MET H2 H N N 261 MET HA H N N 262 MET HB2 H N N 263 MET HB3 H N N 264 MET HG2 H N N 265 MET HG3 H N N 266 MET HE1 H N N 267 MET HE2 H N N 268 MET HE3 H N N 269 MET HXT H N N 270 MGP PA P N R 271 MGP O1A O N N 272 MGP O2A O N N 273 MGP O3A O N N 274 MGP "O5'" O N N 275 MGP PB P N S 276 MGP O1B O N N 277 MGP O2B O N N 278 MGP O3B O N N 279 MGP PC P N N 280 MGP O1C O N N 281 MGP O2C O N N 282 MGP O3C O N N 283 MGP "C5'" C N N 284 MGP "C4'" C N R 285 MGP "O4'" O N N 286 MGP "C3'" C N S 287 MGP "O3'" O N N 288 MGP "C2'" C N R 289 MGP "O2'" O N N 290 MGP "C1'" C N R 291 MGP N9 N Y N 292 MGP C8 C Y N 293 MGP N7 N Y N 294 MGP CM7 C N N 295 MGP C5 C Y N 296 MGP C6 C N N 297 MGP O6 O N N 298 MGP N1 N N N 299 MGP C2 C N N 300 MGP N2 N N N 301 MGP N3 N N N 302 MGP C4 C Y N 303 MGP "H5'" H N N 304 MGP "H5'A" H N N 305 MGP "H4'" H N N 306 MGP "H3'" H N N 307 MGP "HO3'" H N N 308 MGP "H2'" H N N 309 MGP "HO2'" H N N 310 MGP "H1'" H N N 311 MGP H8 H N N 312 MGP HM7 H N N 313 MGP HM7A H N N 314 MGP HM7B H N N 315 MGP HN1 H N N 316 MGP HN2 H N N 317 MGP HN2A H N N 318 MGP H16 H N N 319 MGP H17 H N N 320 MGP H18 H N N 321 MGP H19 H N N 322 MK8 C C N N 323 MK8 N N N N 324 MK8 O O N N 325 MK8 CA C N S 326 MK8 CB C N N 327 MK8 CD C N N 328 MK8 CE C N N 329 MK8 CG C N N 330 MK8 CB1 C N N 331 MK8 OXT O N N 332 MK8 H H N N 333 MK8 H2 H N N 334 MK8 HB H N N 335 MK8 HBA H N N 336 MK8 HD H N N 337 MK8 HDA H N N 338 MK8 HE H N N 339 MK8 HEA H N N 340 MK8 HEB H N N 341 MK8 HG H N N 342 MK8 HGA H N N 343 MK8 HB1 H N N 344 MK8 HB1A H N N 345 MK8 HB1B H N N 346 MK8 HXT H N N 347 NH2 N N N N 348 NH2 HN1 H N N 349 NH2 HN2 H N N 350 PEG C1 C N N 351 PEG O1 O N N 352 PEG C2 C N N 353 PEG O2 O N N 354 PEG C3 C N N 355 PEG C4 C N N 356 PEG O4 O N N 357 PEG H11 H N N 358 PEG H12 H N N 359 PEG HO1 H N N 360 PEG H21 H N N 361 PEG H22 H N N 362 PEG H31 H N N 363 PEG H32 H N N 364 PEG H41 H N N 365 PEG H42 H N N 366 PEG HO4 H N N 367 PHE N N N N 368 PHE CA C N S 369 PHE C C N N 370 PHE O O N N 371 PHE CB C N N 372 PHE CG C Y N 373 PHE CD1 C Y N 374 PHE CD2 C Y N 375 PHE CE1 C Y N 376 PHE CE2 C Y N 377 PHE CZ C Y N 378 PHE OXT O N N 379 PHE H H N N 380 PHE H2 H N N 381 PHE HA H N N 382 PHE HB2 H N N 383 PHE HB3 H N N 384 PHE HD1 H N N 385 PHE HD2 H N N 386 PHE HE1 H N N 387 PHE HE2 H N N 388 PHE HZ H N N 389 PHE HXT H N N 390 PRO N N N N 391 PRO CA C N S 392 PRO C C N N 393 PRO O O N N 394 PRO CB C N N 395 PRO CG C N N 396 PRO CD C N N 397 PRO OXT O N N 398 PRO H H N N 399 PRO HA H N N 400 PRO HB2 H N N 401 PRO HB3 H N N 402 PRO HG2 H N N 403 PRO HG3 H N N 404 PRO HD2 H N N 405 PRO HD3 H N N 406 PRO HXT H N N 407 SER N N N N 408 SER CA C N S 409 SER C C N N 410 SER O O N N 411 SER CB C N N 412 SER OG O N N 413 SER OXT O N N 414 SER H H N N 415 SER H2 H N N 416 SER HA H N N 417 SER HB2 H N N 418 SER HB3 H N N 419 SER HG H N N 420 SER HXT H N N 421 THR N N N N 422 THR CA C N S 423 THR C C N N 424 THR O O N N 425 THR CB C N R 426 THR OG1 O N N 427 THR CG2 C N N 428 THR OXT O N N 429 THR H H N N 430 THR H2 H N N 431 THR HA H N N 432 THR HB H N N 433 THR HG1 H N N 434 THR HG21 H N N 435 THR HG22 H N N 436 THR HG23 H N N 437 THR HXT H N N 438 TRP N N N N 439 TRP CA C N S 440 TRP C C N N 441 TRP O O N N 442 TRP CB C N N 443 TRP CG C Y N 444 TRP CD1 C Y N 445 TRP CD2 C Y N 446 TRP NE1 N Y N 447 TRP CE2 C Y N 448 TRP CE3 C Y N 449 TRP CZ2 C Y N 450 TRP CZ3 C Y N 451 TRP CH2 C Y N 452 TRP OXT O N N 453 TRP H H N N 454 TRP H2 H N N 455 TRP HA H N N 456 TRP HB2 H N N 457 TRP HB3 H N N 458 TRP HD1 H N N 459 TRP HE1 H N N 460 TRP HE3 H N N 461 TRP HZ2 H N N 462 TRP HZ3 H N N 463 TRP HH2 H N N 464 TRP HXT H N N 465 TYR N N N N 466 TYR CA C N S 467 TYR C C N N 468 TYR O O N N 469 TYR CB C N N 470 TYR CG C Y N 471 TYR CD1 C Y N 472 TYR CD2 C Y N 473 TYR CE1 C Y N 474 TYR CE2 C Y N 475 TYR CZ C Y N 476 TYR OH O N N 477 TYR OXT O N N 478 TYR H H N N 479 TYR H2 H N N 480 TYR HA H N N 481 TYR HB2 H N N 482 TYR HB3 H N N 483 TYR HD1 H N N 484 TYR HD2 H N N 485 TYR HE1 H N N 486 TYR HE2 H N N 487 TYR HH H N N 488 TYR HXT H N N 489 VAL N N N N 490 VAL CA C N S 491 VAL C C N N 492 VAL O O N N 493 VAL CB C N N 494 VAL CG1 C N N 495 VAL CG2 C N N 496 VAL OXT O N N 497 VAL H H N N 498 VAL H2 H N N 499 VAL HA H N N 500 VAL HB H N N 501 VAL HG11 H N N 502 VAL HG12 H N N 503 VAL HG13 H N N 504 VAL HG21 H N N 505 VAL HG22 H N N 506 VAL HG23 H N N 507 VAL HXT H N N 508 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 GLN N CA sing N N 89 GLN N H sing N N 90 GLN N H2 sing N N 91 GLN CA C sing N N 92 GLN CA CB sing N N 93 GLN CA HA sing N N 94 GLN C O doub N N 95 GLN C OXT sing N N 96 GLN CB CG sing N N 97 GLN CB HB2 sing N N 98 GLN CB HB3 sing N N 99 GLN CG CD sing N N 100 GLN CG HG2 sing N N 101 GLN CG HG3 sing N N 102 GLN CD OE1 doub N N 103 GLN CD NE2 sing N N 104 GLN NE2 HE21 sing N N 105 GLN NE2 HE22 sing N N 106 GLN OXT HXT sing N N 107 GLU N CA sing N N 108 GLU N H sing N N 109 GLU N H2 sing N N 110 GLU CA C sing N N 111 GLU CA CB sing N N 112 GLU CA HA sing N N 113 GLU C O doub N N 114 GLU C OXT sing N N 115 GLU CB CG sing N N 116 GLU CB HB2 sing N N 117 GLU CB HB3 sing N N 118 GLU CG CD sing N N 119 GLU CG HG2 sing N N 120 GLU CG HG3 sing N N 121 GLU CD OE1 doub N N 122 GLU CD OE2 sing N N 123 GLU OE2 HE2 sing N N 124 GLU OXT HXT sing N N 125 GLY N CA sing N N 126 GLY N H sing N N 127 GLY N H2 sing N N 128 GLY CA C sing N N 129 GLY CA HA2 sing N N 130 GLY CA HA3 sing N N 131 GLY C O doub N N 132 GLY C OXT sing N N 133 GLY OXT HXT sing N N 134 GOL C1 O1 sing N N 135 GOL C1 C2 sing N N 136 GOL C1 H11 sing N N 137 GOL C1 H12 sing N N 138 GOL O1 HO1 sing N N 139 GOL C2 O2 sing N N 140 GOL C2 C3 sing N N 141 GOL C2 H2 sing N N 142 GOL O2 HO2 sing N N 143 GOL C3 O3 sing N N 144 GOL C3 H31 sing N N 145 GOL C3 H32 sing N N 146 GOL O3 HO3 sing N N 147 HIS N CA sing N N 148 HIS N H sing N N 149 HIS N H2 sing N N 150 HIS CA C sing N N 151 HIS CA CB sing N N 152 HIS CA HA sing N N 153 HIS C O doub N N 154 HIS C OXT sing N N 155 HIS CB CG sing N N 156 HIS CB HB2 sing N N 157 HIS CB HB3 sing N N 158 HIS CG ND1 sing Y N 159 HIS CG CD2 doub Y N 160 HIS ND1 CE1 doub Y N 161 HIS ND1 HD1 sing N N 162 HIS CD2 NE2 sing Y N 163 HIS CD2 HD2 sing N N 164 HIS CE1 NE2 sing Y N 165 HIS CE1 HE1 sing N N 166 HIS NE2 HE2 sing N N 167 HIS OXT HXT sing N N 168 HOH O H1 sing N N 169 HOH O H2 sing N N 170 ILE N CA sing N N 171 ILE N H sing N N 172 ILE N H2 sing N N 173 ILE CA C sing N N 174 ILE CA CB sing N N 175 ILE CA HA sing N N 176 ILE C O doub N N 177 ILE C OXT sing N N 178 ILE CB CG1 sing N N 179 ILE CB CG2 sing N N 180 ILE CB HB sing N N 181 ILE CG1 CD1 sing N N 182 ILE CG1 HG12 sing N N 183 ILE CG1 HG13 sing N N 184 ILE CG2 HG21 sing N N 185 ILE CG2 HG22 sing N N 186 ILE CG2 HG23 sing N N 187 ILE CD1 HD11 sing N N 188 ILE CD1 HD12 sing N N 189 ILE CD1 HD13 sing N N 190 ILE OXT HXT sing N N 191 LEU N CA sing N N 192 LEU N H sing N N 193 LEU N H2 sing N N 194 LEU CA C sing N N 195 LEU CA CB sing N N 196 LEU CA HA sing N N 197 LEU C O doub N N 198 LEU C OXT sing N N 199 LEU CB CG sing N N 200 LEU CB HB2 sing N N 201 LEU CB HB3 sing N N 202 LEU CG CD1 sing N N 203 LEU CG CD2 sing N N 204 LEU CG HG sing N N 205 LEU CD1 HD11 sing N N 206 LEU CD1 HD12 sing N N 207 LEU CD1 HD13 sing N N 208 LEU CD2 HD21 sing N N 209 LEU CD2 HD22 sing N N 210 LEU CD2 HD23 sing N N 211 LEU OXT HXT sing N N 212 LYS N CA sing N N 213 LYS N H sing N N 214 LYS N H2 sing N N 215 LYS CA C sing N N 216 LYS CA CB sing N N 217 LYS CA HA sing N N 218 LYS C O doub N N 219 LYS C OXT sing N N 220 LYS CB CG sing N N 221 LYS CB HB2 sing N N 222 LYS CB HB3 sing N N 223 LYS CG CD sing N N 224 LYS CG HG2 sing N N 225 LYS CG HG3 sing N N 226 LYS CD CE sing N N 227 LYS CD HD2 sing N N 228 LYS CD HD3 sing N N 229 LYS CE NZ sing N N 230 LYS CE HE2 sing N N 231 LYS CE HE3 sing N N 232 LYS NZ HZ1 sing N N 233 LYS NZ HZ2 sing N N 234 LYS NZ HZ3 sing N N 235 LYS OXT HXT sing N N 236 MET N CA sing N N 237 MET N H sing N N 238 MET N H2 sing N N 239 MET CA C sing N N 240 MET CA CB sing N N 241 MET CA HA sing N N 242 MET C O doub N N 243 MET C OXT sing N N 244 MET CB CG sing N N 245 MET CB HB2 sing N N 246 MET CB HB3 sing N N 247 MET CG SD sing N N 248 MET CG HG2 sing N N 249 MET CG HG3 sing N N 250 MET SD CE sing N N 251 MET CE HE1 sing N N 252 MET CE HE2 sing N N 253 MET CE HE3 sing N N 254 MET OXT HXT sing N N 255 MGP PA O1A sing N N 256 MGP PA O2A doub N N 257 MGP PA O3A sing N N 258 MGP PA "O5'" sing N N 259 MGP O3A PB sing N N 260 MGP "O5'" "C5'" sing N N 261 MGP PB O1B sing N N 262 MGP PB O2B doub N N 263 MGP PB O3B sing N N 264 MGP O3B PC sing N N 265 MGP PC O1C sing N N 266 MGP PC O2C doub N N 267 MGP PC O3C sing N N 268 MGP "C5'" "C4'" sing N N 269 MGP "C5'" "H5'" sing N N 270 MGP "C5'" "H5'A" sing N N 271 MGP "C4'" "O4'" sing N N 272 MGP "C4'" "C3'" sing N N 273 MGP "C4'" "H4'" sing N N 274 MGP "O4'" "C1'" sing N N 275 MGP "C3'" "O3'" sing N N 276 MGP "C3'" "C2'" sing N N 277 MGP "C3'" "H3'" sing N N 278 MGP "O3'" "HO3'" sing N N 279 MGP "C2'" "O2'" sing N N 280 MGP "C2'" "C1'" sing N N 281 MGP "C2'" "H2'" sing N N 282 MGP "O2'" "HO2'" sing N N 283 MGP "C1'" N9 sing N N 284 MGP "C1'" "H1'" sing N N 285 MGP N9 C8 sing Y N 286 MGP N9 C4 sing Y N 287 MGP C8 N7 doub Y N 288 MGP C8 H8 sing N N 289 MGP N7 CM7 sing N N 290 MGP N7 C5 sing Y N 291 MGP CM7 HM7 sing N N 292 MGP CM7 HM7A sing N N 293 MGP CM7 HM7B sing N N 294 MGP C5 C6 sing N N 295 MGP C5 C4 doub Y N 296 MGP C6 O6 doub N N 297 MGP C6 N1 sing N N 298 MGP N1 C2 sing N N 299 MGP N1 HN1 sing N N 300 MGP C2 N2 sing N N 301 MGP C2 N3 doub N N 302 MGP N2 HN2 sing N N 303 MGP N2 HN2A sing N N 304 MGP N3 C4 sing N N 305 MGP O1A H16 sing N N 306 MGP O1B H17 sing N N 307 MGP O1C H18 sing N N 308 MGP O3C H19 sing N N 309 MK8 C CA sing N N 310 MK8 C OXT sing N N 311 MK8 N H sing N N 312 MK8 N H2 sing N N 313 MK8 O C doub N N 314 MK8 CA N sing N N 315 MK8 CA CB sing N N 316 MK8 CB HB sing N N 317 MK8 CB HBA sing N N 318 MK8 CD CG sing N N 319 MK8 CD HD sing N N 320 MK8 CD HDA sing N N 321 MK8 CE CD sing N N 322 MK8 CE HE sing N N 323 MK8 CE HEA sing N N 324 MK8 CE HEB sing N N 325 MK8 CG CB sing N N 326 MK8 CG HG sing N N 327 MK8 CG HGA sing N N 328 MK8 CB1 CA sing N N 329 MK8 CB1 HB1 sing N N 330 MK8 CB1 HB1A sing N N 331 MK8 CB1 HB1B sing N N 332 MK8 OXT HXT sing N N 333 NH2 N HN1 sing N N 334 NH2 N HN2 sing N N 335 PEG C1 O1 sing N N 336 PEG C1 C2 sing N N 337 PEG C1 H11 sing N N 338 PEG C1 H12 sing N N 339 PEG O1 HO1 sing N N 340 PEG C2 O2 sing N N 341 PEG C2 H21 sing N N 342 PEG C2 H22 sing N N 343 PEG O2 C3 sing N N 344 PEG C3 C4 sing N N 345 PEG C3 H31 sing N N 346 PEG C3 H32 sing N N 347 PEG C4 O4 sing N N 348 PEG C4 H41 sing N N 349 PEG C4 H42 sing N N 350 PEG O4 HO4 sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 PRO N CA sing N N 375 PRO N CD sing N N 376 PRO N H sing N N 377 PRO CA C sing N N 378 PRO CA CB sing N N 379 PRO CA HA sing N N 380 PRO C O doub N N 381 PRO C OXT sing N N 382 PRO CB CG sing N N 383 PRO CB HB2 sing N N 384 PRO CB HB3 sing N N 385 PRO CG CD sing N N 386 PRO CG HG2 sing N N 387 PRO CG HG3 sing N N 388 PRO CD HD2 sing N N 389 PRO CD HD3 sing N N 390 PRO OXT HXT sing N N 391 SER N CA sing N N 392 SER N H sing N N 393 SER N H2 sing N N 394 SER CA C sing N N 395 SER CA CB sing N N 396 SER CA HA sing N N 397 SER C O doub N N 398 SER C OXT sing N N 399 SER CB OG sing N N 400 SER CB HB2 sing N N 401 SER CB HB3 sing N N 402 SER OG HG sing N N 403 SER OXT HXT sing N N 404 THR N CA sing N N 405 THR N H sing N N 406 THR N H2 sing N N 407 THR CA C sing N N 408 THR CA CB sing N N 409 THR CA HA sing N N 410 THR C O doub N N 411 THR C OXT sing N N 412 THR CB OG1 sing N N 413 THR CB CG2 sing N N 414 THR CB HB sing N N 415 THR OG1 HG1 sing N N 416 THR CG2 HG21 sing N N 417 THR CG2 HG22 sing N N 418 THR CG2 HG23 sing N N 419 THR OXT HXT sing N N 420 TRP N CA sing N N 421 TRP N H sing N N 422 TRP N H2 sing N N 423 TRP CA C sing N N 424 TRP CA CB sing N N 425 TRP CA HA sing N N 426 TRP C O doub N N 427 TRP C OXT sing N N 428 TRP CB CG sing N N 429 TRP CB HB2 sing N N 430 TRP CB HB3 sing N N 431 TRP CG CD1 doub Y N 432 TRP CG CD2 sing Y N 433 TRP CD1 NE1 sing Y N 434 TRP CD1 HD1 sing N N 435 TRP CD2 CE2 doub Y N 436 TRP CD2 CE3 sing Y N 437 TRP NE1 CE2 sing Y N 438 TRP NE1 HE1 sing N N 439 TRP CE2 CZ2 sing Y N 440 TRP CE3 CZ3 doub Y N 441 TRP CE3 HE3 sing N N 442 TRP CZ2 CH2 doub Y N 443 TRP CZ2 HZ2 sing N N 444 TRP CZ3 CH2 sing Y N 445 TRP CZ3 HZ3 sing N N 446 TRP CH2 HH2 sing N N 447 TRP OXT HXT sing N N 448 TYR N CA sing N N 449 TYR N H sing N N 450 TYR N H2 sing N N 451 TYR CA C sing N N 452 TYR CA CB sing N N 453 TYR CA HA sing N N 454 TYR C O doub N N 455 TYR C OXT sing N N 456 TYR CB CG sing N N 457 TYR CB HB2 sing N N 458 TYR CB HB3 sing N N 459 TYR CG CD1 doub Y N 460 TYR CG CD2 sing Y N 461 TYR CD1 CE1 sing Y N 462 TYR CD1 HD1 sing N N 463 TYR CD2 CE2 doub Y N 464 TYR CD2 HD2 sing N N 465 TYR CE1 CZ doub Y N 466 TYR CE1 HE1 sing N N 467 TYR CE2 CZ sing Y N 468 TYR CE2 HE2 sing N N 469 TYR CZ OH sing N N 470 TYR OH HH sing N N 471 TYR OXT HXT sing N N 472 VAL N CA sing N N 473 VAL N H sing N N 474 VAL N H2 sing N N 475 VAL CA C sing N N 476 VAL CA CB sing N N 477 VAL CA HA sing N N 478 VAL C O doub N N 479 VAL C OXT sing N N 480 VAL CB CG1 sing N N 481 VAL CB CG2 sing N N 482 VAL CB HB sing N N 483 VAL CG1 HG11 sing N N 484 VAL CG1 HG12 sing N N 485 VAL CG1 HG13 sing N N 486 VAL CG2 HG21 sing N N 487 VAL CG2 HG22 sing N N 488 VAL CG2 HG23 sing N N 489 VAL OXT HXT sing N N 490 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 "7-METHYL-GUANOSINE-5'-TRIPHOSPHATE" MGP 4 'DI(HYDROXYETHYL)ETHER' PEG 5 GLYCEROL GOL 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4TPW _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'surface plasmon resonance' _pdbx_struct_assembly_auth_evidence.details ? #