HEADER HYDROLASE 10-APR-18 5ZNO TITLE CRYSTAL STRUCTURE OF PET-DEGRADING CUTINASE CUT190 S176A/S226P/R228S/ TITLE 2 MUTANT IN CA(2+)-BOUND STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA/BETA HYDROLASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CUTINASE; COMPND 5 EC: 3.1.1.74; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMONOSPORA VIRIDIS; SOURCE 3 ORGANISM_TAXID: 1852; SOURCE 4 STRAIN: AHK190; SOURCE 5 GENE: CUT190, SAMN02982918_2340; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA-GAMI B (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE80L KEYWDS POLYESTERASE, ALPHA/BETA-HYDROLASE FOLD, PROTEIN ENGINEERING, KEYWDS 2 THERMOSTABILITY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.NUMOTO,S.INABA,Y.YAMAGAMI,N.KAMIYA,G.J.BEKKER,K.ISHII,S.UCHIYAMA, AUTHOR 2 F.KAWAI,N.ITO,M.ODA REVDAT 4 20-NOV-24 5ZNO 1 REMARK REVDAT 3 22-NOV-23 5ZNO 1 LINK REVDAT 2 26-SEP-18 5ZNO 1 JRNL REVDAT 1 12-SEP-18 5ZNO 0 JRNL AUTH N.NUMOTO,N.KAMIYA,G.J.BEKKER,Y.YAMAGAMI,S.INABA,K.ISHII, JRNL AUTH 2 S.UCHIYAMA,F.KAWAI,N.ITO,M.ODA JRNL TITL STRUCTURAL DYNAMICS OF THE PET-DEGRADING CUTINASE-LIKE JRNL TITL 2 ENZYME FROM SACCHAROMONOSPORA VIRIDIS AHK190 IN JRNL TITL 3 SUBSTRATE-BOUND STATES ELUCIDATES THE CA2+-DRIVEN CATALYTIC JRNL TITL 4 CYCLE. JRNL REF BIOCHEMISTRY V. 57 5289 2018 JRNL REFN ISSN 1520-4995 JRNL PMID 30110540 JRNL DOI 10.1021/ACS.BIOCHEM.8B00624 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.347 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 75047 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.994 REMARK 3 FREE R VALUE TEST SET COUNT : 3748 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.7390 - 4.8064 0.98 2737 144 0.1486 0.1753 REMARK 3 2 4.8064 - 3.8155 0.98 2673 141 0.1260 0.1649 REMARK 3 3 3.8155 - 3.3333 0.99 2644 138 0.1364 0.1721 REMARK 3 4 3.3333 - 3.0286 0.99 2656 139 0.1534 0.1987 REMARK 3 5 3.0286 - 2.8115 0.99 2661 141 0.1569 0.1870 REMARK 3 6 2.8115 - 2.6458 0.99 2663 139 0.1599 0.2133 REMARK 3 7 2.6458 - 2.5133 1.00 2657 140 0.1593 0.1843 REMARK 3 8 2.5133 - 2.4039 0.99 2640 139 0.1648 0.1987 REMARK 3 9 2.4039 - 2.3114 0.99 2633 139 0.1613 0.2275 REMARK 3 10 2.3114 - 2.2316 0.99 2622 136 0.1749 0.2301 REMARK 3 11 2.2316 - 2.1618 0.99 2651 138 0.1812 0.1992 REMARK 3 12 2.1618 - 2.1000 0.99 2660 140 0.1856 0.2528 REMARK 3 13 2.1000 - 2.0447 0.99 2645 137 0.1884 0.2363 REMARK 3 14 2.0447 - 1.9948 1.00 2594 138 0.2007 0.2508 REMARK 3 15 1.9948 - 1.9495 0.99 2653 140 0.2112 0.2686 REMARK 3 16 1.9495 - 1.9080 0.99 2613 137 0.2148 0.2614 REMARK 3 17 1.9080 - 1.8698 1.00 2648 139 0.2091 0.2795 REMARK 3 18 1.8698 - 1.8346 1.00 2618 138 0.2221 0.2723 REMARK 3 19 1.8346 - 1.8018 0.99 2642 140 0.2252 0.2866 REMARK 3 20 1.8018 - 1.7712 0.99 2605 138 0.2381 0.2815 REMARK 3 21 1.7712 - 1.7427 0.99 2631 139 0.2551 0.2849 REMARK 3 22 1.7427 - 1.7159 1.00 2623 137 0.2715 0.3175 REMARK 3 23 1.7159 - 1.6906 0.99 2655 139 0.2800 0.3571 REMARK 3 24 1.6906 - 1.6668 1.00 2601 137 0.3213 0.3482 REMARK 3 25 1.6668 - 1.6443 0.99 2637 140 0.3303 0.3305 REMARK 3 26 1.6443 - 1.6229 1.00 2637 139 0.3177 0.3790 REMARK 3 27 1.6229 - 1.6026 0.98 2600 136 0.3187 0.3257 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.236 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.943 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4199 REMARK 3 ANGLE : 1.062 5710 REMARK 3 CHIRALITY : 0.045 612 REMARK 3 PLANARITY : 0.006 753 REMARK 3 DIHEDRAL : 12.180 1551 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZNO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-APR-18. REMARK 100 THE DEPOSITION ID IS D_1300007412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1000 REMARK 200 MONOCHROMATOR : CRYO-COOLED CHANNEL-CUT SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75063 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.95000 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4WFJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 10% W/V PEG 8000, REMARK 280 8% V/V ETHYLENE GLYCOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 61.85250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.86600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 61.85250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.86600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 43 REMARK 465 PRO A 44 REMARK 465 GLN A 45 REMARK 465 LEU A 306 REMARK 465 ASN A 307 REMARK 465 GLY B 43 REMARK 465 PRO B 44 REMARK 465 GLN B 45 REMARK 465 ASN B 307 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 901 O HOH A 902 2.13 REMARK 500 O HOH A 505 O HOH A 781 2.13 REMARK 500 O HOH A 530 O HOH A 849 2.17 REMARK 500 O HOH A 548 O HOH A 782 2.18 REMARK 500 O HOH A 726 O HOH A 798 2.18 REMARK 500 O HOH B 553 O HOH B 737 2.18 REMARK 500 O HOH B 802 O HOH B 826 2.18 REMARK 500 O HOH A 758 O HOH A 823 2.18 REMARK 500 O HOH B 738 O HOH B 802 2.19 REMARK 500 O HOH A 911 O HOH A 915 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 810 O HOH B 553 1545 2.14 REMARK 500 O HOH B 784 O HOH B 837 4446 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 107 -7.34 76.80 REMARK 500 ALA A 176 -121.80 64.94 REMARK 500 THR A 199 59.58 29.86 REMARK 500 HIS A 230 -79.96 -123.89 REMARK 500 ALA B 176 -117.71 63.58 REMARK 500 THR B 199 62.29 26.11 REMARK 500 ALA B 225 71.88 -119.31 REMARK 500 HIS B 230 -88.83 -109.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 918 DISTANCE = 6.99 ANGSTROMS REMARK 525 HOH B 870 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH B 871 DISTANCE = 6.82 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 76 O REMARK 620 2 ALA A 78 O 97.6 REMARK 620 3 PHE A 81 O 107.0 84.7 REMARK 620 4 HOH A 627 O 91.0 166.2 82.4 REMARK 620 5 HOH A 657 O 160.8 96.2 87.6 78.3 REMARK 620 6 HOH A 786 O 88.4 97.2 164.1 93.8 76.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 204 OD1 REMARK 620 2 ASP A 204 OD2 51.7 REMARK 620 3 THR A 206 O 83.2 106.9 REMARK 620 4 THR A 206 OG1 74.9 125.8 70.9 REMARK 620 5 HOH A 676 O 113.1 77.9 71.7 140.4 REMARK 620 6 HOH A 728 O 150.6 157.7 81.6 76.3 85.7 REMARK 620 7 HOH A 754 O 79.5 84.7 146.0 76.4 142.2 99.8 REMARK 620 8 HOH A 793 O 128.6 86.4 143.8 128.3 78.7 75.6 66.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 220 OE1 REMARK 620 2 GLU A 220 OE2 52.8 REMARK 620 3 ASP A 250 OD1 75.4 127.3 REMARK 620 4 GLU A 296 OE1 92.0 81.9 92.5 REMARK 620 5 HOH A 572 O 128.1 76.4 156.3 90.0 REMARK 620 6 HOH A 757 O 156.8 150.2 81.4 89.9 75.0 REMARK 620 7 HOH A 783 O 87.3 95.1 90.6 176.6 87.8 92.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 531 O REMARK 620 2 HOH A 713 O 72.8 REMARK 620 3 HOH A 765 O 79.5 81.3 REMARK 620 4 HOH B 529 O 140.5 69.7 82.9 REMARK 620 5 HOH B 571 O 148.9 134.6 89.7 65.0 REMARK 620 6 HOH B 739 O 82.1 76.5 154.6 100.7 114.7 REMARK 620 7 HOH B 853 O 70.9 143.6 94.6 146.0 81.1 95.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 76 O REMARK 620 2 ALA B 78 O 96.1 REMARK 620 3 PHE B 81 O 84.0 79.5 REMARK 620 4 HOH B 766 O 153.3 107.7 111.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 204 OD1 REMARK 620 2 ASP B 204 OD2 50.4 REMARK 620 3 THR B 206 O 81.9 110.0 REMARK 620 4 THR B 206 OG1 77.0 124.6 72.8 REMARK 620 5 HOH B 634 O 85.2 87.0 143.2 70.7 REMARK 620 6 HOH B 639 O 106.1 76.9 71.2 142.9 145.6 REMARK 620 7 HOH B 719 O 150.0 159.6 79.8 75.0 95.4 90.2 REMARK 620 8 HOH B 757 O 128.6 81.4 138.8 134.1 74.3 73.5 79.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 220 OE1 REMARK 620 2 GLU B 220 OE2 51.3 REMARK 620 3 ASP B 250 OD1 74.7 126.0 REMARK 620 4 GLU B 296 OE1 95.0 92.6 94.6 REMARK 620 5 HOH B 553 O 67.2 86.0 69.1 158.1 REMARK 620 6 HOH B 737 O 93.8 71.0 115.3 150.1 48.7 REMARK 620 7 HOH B 749 O 150.7 149.1 80.2 102.0 89.9 83.3 REMARK 620 8 HOH B 755 O 134.2 83.0 150.2 90.1 111.3 63.7 70.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 406 DBREF 5ZNO A 45 304 UNP W0TJ64 W0TJ64_9PSEU 45 304 DBREF 5ZNO B 45 304 UNP W0TJ64 W0TJ64_9PSEU 45 304 SEQADV 5ZNO GLY A 43 UNP W0TJ64 EXPRESSION TAG SEQADV 5ZNO PRO A 44 UNP W0TJ64 EXPRESSION TAG SEQADV 5ZNO ALA A 176 UNP W0TJ64 SER 176 ENGINEERED MUTATION SEQADV 5ZNO PRO A 226 UNP W0TJ64 SER 226 ENGINEERED MUTATION SEQADV 5ZNO SER A 228 UNP W0TJ64 ARG 228 ENGINEERED MUTATION SEQADV 5ZNO LYS A 305 UNP W0TJ64 EXPRESSION TAG SEQADV 5ZNO LEU A 306 UNP W0TJ64 EXPRESSION TAG SEQADV 5ZNO ASN A 307 UNP W0TJ64 EXPRESSION TAG SEQADV 5ZNO GLY B 43 UNP W0TJ64 EXPRESSION TAG SEQADV 5ZNO PRO B 44 UNP W0TJ64 EXPRESSION TAG SEQADV 5ZNO ALA B 176 UNP W0TJ64 SER 176 ENGINEERED MUTATION SEQADV 5ZNO PRO B 226 UNP W0TJ64 SER 226 ENGINEERED MUTATION SEQADV 5ZNO SER B 228 UNP W0TJ64 ARG 228 ENGINEERED MUTATION SEQADV 5ZNO LYS B 305 UNP W0TJ64 EXPRESSION TAG SEQADV 5ZNO LEU B 306 UNP W0TJ64 EXPRESSION TAG SEQADV 5ZNO ASN B 307 UNP W0TJ64 EXPRESSION TAG SEQRES 1 A 265 GLY PRO GLN ASP ASN PRO TYR GLU ARG GLY PRO ASP PRO SEQRES 2 A 265 THR GLU ASP SER ILE GLU ALA ILE ARG GLY PRO PHE SER SEQRES 3 A 265 VAL ALA THR GLU ARG VAL SER SER PHE ALA SER GLY PHE SEQRES 4 A 265 GLY GLY GLY THR ILE TYR TYR PRO ARG GLU THR ASP GLU SEQRES 5 A 265 GLY THR PHE GLY ALA VAL ALA VAL ALA PRO GLY PHE THR SEQRES 6 A 265 ALA SER GLN GLY SER MET SER TRP TYR GLY GLU ARG VAL SEQRES 7 A 265 ALA SER GLN GLY PHE ILE VAL PHE THR ILE ASP THR ASN SEQRES 8 A 265 THR ARG LEU ASP GLN PRO GLY GLN ARG GLY ARG GLN LEU SEQRES 9 A 265 LEU ALA ALA LEU ASP TYR LEU VAL GLU ARG SER ASP ARG SEQRES 10 A 265 LYS VAL ARG GLU ARG LEU ASP PRO ASN ARG LEU ALA VAL SEQRES 11 A 265 MET GLY HIS ALA MET GLY GLY GLY GLY SER LEU GLU ALA SEQRES 12 A 265 THR VAL MET ARG PRO SER LEU LYS ALA SER ILE PRO LEU SEQRES 13 A 265 THR PRO TRP ASN LEU ASP LYS THR TRP GLY GLN VAL GLN SEQRES 14 A 265 VAL PRO THR PHE ILE ILE GLY ALA GLU LEU ASP THR ILE SEQRES 15 A 265 ALA PRO VAL SER THR HIS ALA LYS PRO PHE TYR GLU SER SEQRES 16 A 265 LEU PRO SER SER LEU PRO LYS ALA TYR MET GLU LEU ASP SEQRES 17 A 265 GLY ALA THR HIS PHE ALA PRO ASN ILE PRO ASN THR THR SEQRES 18 A 265 ILE ALA LYS TYR VAL ILE SER TRP LEU LYS ARG PHE VAL SEQRES 19 A 265 ASP GLU ASP THR ARG TYR SER GLN PHE LEU CYS PRO ASN SEQRES 20 A 265 PRO THR ASP ARG ALA ILE GLU GLU TYR ARG SER THR CYS SEQRES 21 A 265 PRO TYR LYS LEU ASN SEQRES 1 B 265 GLY PRO GLN ASP ASN PRO TYR GLU ARG GLY PRO ASP PRO SEQRES 2 B 265 THR GLU ASP SER ILE GLU ALA ILE ARG GLY PRO PHE SER SEQRES 3 B 265 VAL ALA THR GLU ARG VAL SER SER PHE ALA SER GLY PHE SEQRES 4 B 265 GLY GLY GLY THR ILE TYR TYR PRO ARG GLU THR ASP GLU SEQRES 5 B 265 GLY THR PHE GLY ALA VAL ALA VAL ALA PRO GLY PHE THR SEQRES 6 B 265 ALA SER GLN GLY SER MET SER TRP TYR GLY GLU ARG VAL SEQRES 7 B 265 ALA SER GLN GLY PHE ILE VAL PHE THR ILE ASP THR ASN SEQRES 8 B 265 THR ARG LEU ASP GLN PRO GLY GLN ARG GLY ARG GLN LEU SEQRES 9 B 265 LEU ALA ALA LEU ASP TYR LEU VAL GLU ARG SER ASP ARG SEQRES 10 B 265 LYS VAL ARG GLU ARG LEU ASP PRO ASN ARG LEU ALA VAL SEQRES 11 B 265 MET GLY HIS ALA MET GLY GLY GLY GLY SER LEU GLU ALA SEQRES 12 B 265 THR VAL MET ARG PRO SER LEU LYS ALA SER ILE PRO LEU SEQRES 13 B 265 THR PRO TRP ASN LEU ASP LYS THR TRP GLY GLN VAL GLN SEQRES 14 B 265 VAL PRO THR PHE ILE ILE GLY ALA GLU LEU ASP THR ILE SEQRES 15 B 265 ALA PRO VAL SER THR HIS ALA LYS PRO PHE TYR GLU SER SEQRES 16 B 265 LEU PRO SER SER LEU PRO LYS ALA TYR MET GLU LEU ASP SEQRES 17 B 265 GLY ALA THR HIS PHE ALA PRO ASN ILE PRO ASN THR THR SEQRES 18 B 265 ILE ALA LYS TYR VAL ILE SER TRP LEU LYS ARG PHE VAL SEQRES 19 B 265 ASP GLU ASP THR ARG TYR SER GLN PHE LEU CYS PRO ASN SEQRES 20 B 265 PRO THR ASP ARG ALA ILE GLU GLU TYR ARG SER THR CYS SEQRES 21 B 265 PRO TYR LYS LEU ASN HET CA A 401 1 HET CA A 402 1 HET CA A 403 1 HET GOL A 404 6 HET GOL A 405 6 HET GOL A 406 6 HET CA B 401 1 HET CA B 402 1 HET CA B 403 1 HET CA B 404 1 HET GOL B 405 6 HET GOL B 406 6 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CA 7(CA 2+) FORMUL 6 GOL 5(C3 H8 O3) FORMUL 15 HOH *789(H2 O) HELIX 1 AA1 THR A 56 ALA A 62 1 7 HELIX 2 AA2 SER A 109 SER A 114 5 6 HELIX 3 AA3 TRP A 115 SER A 122 1 8 HELIX 4 AA4 GLN A 138 ARG A 156 1 19 HELIX 5 AA5 ASP A 158 GLU A 163 1 6 HELIX 6 AA6 ALA A 176 ARG A 189 1 14 HELIX 7 AA7 HIS A 230 LEU A 238 1 9 HELIX 8 AA8 PHE A 255 ILE A 259 5 5 HELIX 9 AA9 ASN A 261 ASP A 277 1 17 HELIX 10 AB1 ASP A 279 ARG A 281 5 3 HELIX 11 AB2 TYR A 282 CYS A 287 1 6 HELIX 12 AB3 THR B 56 ALA B 62 1 7 HELIX 13 AB4 SER B 109 SER B 114 5 6 HELIX 14 AB5 TRP B 115 SER B 122 1 8 HELIX 15 AB6 GLN B 138 ARG B 156 1 19 HELIX 16 AB7 ASP B 158 GLU B 163 1 6 HELIX 17 AB8 ALA B 176 ARG B 189 1 14 HELIX 18 AB9 HIS B 230 LEU B 238 1 9 HELIX 19 AC1 PHE B 255 ILE B 259 5 5 HELIX 20 AC2 ASN B 261 ASP B 277 1 17 HELIX 21 AC3 ASP B 279 ARG B 281 5 3 HELIX 22 AC4 TYR B 282 CYS B 287 1 6 SHEET 1 AA1 6 VAL A 69 VAL A 74 0 SHEET 2 AA1 6 GLY A 84 PRO A 89 -1 O ILE A 86 N GLU A 72 SHEET 3 AA1 6 ILE A 126 ILE A 130 -1 O VAL A 127 N TYR A 87 SHEET 4 AA1 6 PHE A 97 ALA A 103 1 N VAL A 102 O PHE A 128 SHEET 5 AA1 6 LEU A 165 HIS A 175 1 O ASP A 166 N PHE A 97 SHEET 6 AA1 6 ALA A 194 LEU A 198 1 O LEU A 198 N GLY A 174 SHEET 1 AA2 3 THR A 214 ALA A 219 0 SHEET 2 AA2 3 LYS A 244 LEU A 249 1 O LEU A 249 N GLY A 218 SHEET 3 AA2 3 ILE A 295 SER A 300 -1 O GLU A 297 N GLU A 248 SHEET 1 AA3 6 VAL B 69 VAL B 74 0 SHEET 2 AA3 6 GLY B 84 PRO B 89 -1 O ILE B 86 N GLU B 72 SHEET 3 AA3 6 ILE B 126 ILE B 130 -1 O VAL B 127 N TYR B 87 SHEET 4 AA3 6 PHE B 97 ALA B 103 1 N VAL B 102 O PHE B 128 SHEET 5 AA3 6 LEU B 165 HIS B 175 1 O ASP B 166 N PHE B 97 SHEET 6 AA3 6 ALA B 194 LEU B 198 1 O LEU B 198 N GLY B 174 SHEET 1 AA4 3 THR B 214 ALA B 219 0 SHEET 2 AA4 3 LYS B 244 LEU B 249 1 O LEU B 249 N GLY B 218 SHEET 3 AA4 3 ILE B 295 SER B 300 -1 O GLU B 297 N GLU B 248 SSBOND 1 CYS A 287 CYS A 302 1555 1555 2.04 SSBOND 2 CYS B 287 CYS B 302 1555 1555 2.03 LINK O SER A 76 CA CA A 403 1555 1555 2.41 LINK O ALA A 78 CA CA A 403 1555 1555 2.35 LINK O PHE A 81 CA CA A 403 1555 1555 2.30 LINK OD1 ASP A 204 CA CA A 402 1555 1555 2.53 LINK OD2 ASP A 204 CA CA A 402 1555 1555 2.53 LINK O THR A 206 CA CA A 402 1555 1555 2.43 LINK OG1 THR A 206 CA CA A 402 1555 1555 2.46 LINK OE1 GLU A 220 CA CA A 401 1555 1555 2.41 LINK OE2 GLU A 220 CA CA A 401 1555 1555 2.52 LINK OD1 ASP A 250 CA CA A 401 1555 1555 2.35 LINK OE1 GLU A 296 CA CA A 401 1555 1555 2.46 LINK CA CA A 401 O HOH A 572 1555 4445 2.32 LINK CA CA A 401 O HOH A 757 1555 1555 2.42 LINK CA CA A 401 O HOH A 783 1555 1555 2.38 LINK CA CA A 402 O HOH A 676 1555 1555 2.53 LINK CA CA A 402 O HOH A 728 1555 1555 2.41 LINK CA CA A 402 O HOH A 754 1555 1555 2.56 LINK CA CA A 402 O HOH A 793 1555 1555 2.46 LINK CA CA A 403 O HOH A 627 1555 1555 2.54 LINK CA CA A 403 O HOH A 657 1555 1555 2.60 LINK CA CA A 403 O HOH A 786 1555 1555 2.35 LINK O HOH A 531 CA CA B 404 1555 1555 2.45 LINK O HOH A 713 CA CA B 404 1555 1555 2.58 LINK O HOH A 765 CA CA B 404 1555 1555 2.43 LINK O SER B 76 CA CA B 403 1555 1555 2.55 LINK O ALA B 78 CA CA B 403 1555 1555 2.36 LINK O PHE B 81 CA CA B 403 1555 1555 2.52 LINK OD1 ASP B 204 CA CA B 401 1555 1555 2.55 LINK OD2 ASP B 204 CA CA B 401 1555 1555 2.59 LINK O THR B 206 CA CA B 401 1555 1555 2.45 LINK OG1 THR B 206 CA CA B 401 1555 1555 2.50 LINK OE1 GLU B 220 CA CA B 402 1555 1555 2.51 LINK OE2 GLU B 220 CA CA B 402 1555 1555 2.53 LINK OD1 ASP B 250 CA CA B 402 1555 1555 2.44 LINK OE1 GLU B 296 CA CA B 402 1555 1555 2.31 LINK CA CA B 401 O HOH B 634 1555 1555 2.41 LINK CA CA B 401 O HOH B 639 1555 1555 2.45 LINK CA CA B 401 O HOH B 719 1555 1555 2.48 LINK CA CA B 401 O HOH B 757 1555 1555 2.47 LINK CA CA B 402 O HOH B 553 1555 1555 2.29 LINK CA CA B 402 O HOH B 737 1555 1555 2.85 LINK CA CA B 402 O HOH B 749 1555 1555 2.57 LINK CA CA B 402 O HOH B 755 1555 1555 2.43 LINK CA CA B 403 O HOH B 766 1555 1555 2.69 LINK CA CA B 404 O HOH B 529 1555 1555 2.46 LINK CA CA B 404 O HOH B 571 1555 1555 2.45 LINK CA CA B 404 O HOH B 739 1555 1555 2.46 LINK CA CA B 404 O HOH B 853 1555 1555 2.26 CISPEP 1 CYS A 287 PRO A 288 0 0.44 CISPEP 2 CYS A 302 PRO A 303 0 2.19 CISPEP 3 CYS B 287 PRO B 288 0 0.25 CISPEP 4 CYS B 302 PRO B 303 0 -2.55 SITE 1 AC1 6 GLU A 220 ASP A 250 GLU A 296 HOH A 572 SITE 2 AC1 6 HOH A 757 HOH A 783 SITE 1 AC2 6 ASP A 204 THR A 206 HOH A 676 HOH A 728 SITE 2 AC2 6 HOH A 754 HOH A 793 SITE 1 AC3 6 SER A 76 ALA A 78 PHE A 81 HOH A 627 SITE 2 AC3 6 HOH A 657 HOH A 786 SITE 1 AC4 8 GLU A 236 SER A 240 LYS A 244 PHE A 255 SITE 2 AC4 8 ARG A 299 HOH A 501 HOH A 547 HOH A 600 SITE 1 AC5 7 PHE A 106 MET A 177 TRP A 201 ILE A 224 SITE 2 AC5 7 HOH A 522 HOH A 544 HOH A 622 SITE 1 AC6 6 GLN A 138 PRO A 139 GLY A 140 GLN A 141 SITE 2 AC6 6 HOH A 506 ARG B 64 SITE 1 AC7 6 ASP B 204 THR B 206 HOH B 634 HOH B 639 SITE 2 AC7 6 HOH B 719 HOH B 757 SITE 1 AC8 7 GLU B 220 ASP B 250 GLU B 296 HOH B 553 SITE 2 AC8 7 HOH B 737 HOH B 749 HOH B 755 SITE 1 AC9 4 SER B 76 ALA B 78 PHE B 81 HOH B 766 SITE 1 AD1 7 HOH A 531 HOH A 713 HOH A 765 HOH B 529 SITE 2 AD1 7 HOH B 571 HOH B 739 HOH B 853 SITE 1 AD2 8 PHE B 106 MET B 177 TRP B 201 GLY B 208 SITE 2 AD2 8 HOH B 513 HOH B 606 HOH B 675 HOH B 723 SITE 1 AD3 5 PRO B 53 PRO B 66 PHE B 67 GLU B 94 SITE 2 AD3 5 HOH B 533 CRYST1 123.705 49.732 95.655 90.00 99.59 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008084 0.000000 0.001366 0.00000 SCALE2 0.000000 0.020108 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010602 0.00000