HEADER TRANSFERASE/RNA 17-APR-18 5ZQ8 TITLE CRYSTAL STRUCTURE OF SPRLMCD WITH U747 STEMLOOP RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED RNA METHYLTRANSFERASE SP_1029; COMPND 3 CHAIN: B, A; COMPND 4 EC: 2.1.1.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA (5'-R(*CP*CP*GP*UP*(MUM)P*GP*AP*AP*AP*AP*GP*G)-3'); COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE SEROTYPE 4 (STRAIN SOURCE 3 ATCC BAA-334 / TIGR4); SOURCE 4 ORGANISM_TAXID: 170187; SOURCE 5 STRAIN: ATCC BAA-334 / TIGR4; SOURCE 6 GENE: SP_1029; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE TIGR4; SOURCE 12 ORGANISM_TAXID: 170187 KEYWDS METHYLTRANSFERASE, RIBOSOME, 23S RNA, STREPTOCOCCUS PNEUMONIAE, KEYWDS 2 TRANSFERASE, TRANSFERASE-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.Y.JIANG,H.L.YU REVDAT 3 22-NOV-23 5ZQ8 1 REMARK REVDAT 2 14-NOV-18 5ZQ8 1 JRNL REVDAT 1 24-OCT-18 5ZQ8 0 JRNL AUTH Y.JIANG,H.YU,F.LI,L.CHENG,L.ZHU,Y.SHI,Q.GONG JRNL TITL UNVEILING THE STRUCTURAL FEATURES THAT DETERMINE THE DUAL JRNL TITL 2 METHYLTRANSFERASE ACTIVITIES OF STREPTOCOCCUS PNEUMONIAE JRNL TITL 3 RLMCD JRNL REF PLOS PATHOG. V. 14 07379 2018 JRNL REFN ESSN 1553-7374 JRNL PMID 30388185 JRNL DOI 10.1371/JOURNAL.PPAT.1007379 REMARK 2 REMARK 2 RESOLUTION. 2.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0222 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.5 REMARK 3 NUMBER OF REFLECTIONS : 45786 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.303 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2293 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.18 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3630 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.3660 REMARK 3 BIN FREE R VALUE SET COUNT : 205 REMARK 3 BIN FREE R VALUE : 0.3750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6978 REMARK 3 NUCLEIC ACID ATOMS : 516 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 67 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.400 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.286 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.297 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.562 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.895 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7741 ; 0.008 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 6755 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10619 ; 1.318 ; 1.636 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15736 ; 0.862 ; 1.696 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 906 ; 7.834 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 351 ;36.904 ;23.419 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1187 ;18.887 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 35 ;22.899 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1062 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8379 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1409 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 B 1 454 A 1 454 13362 0.090 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5ZQ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-APR-18. REMARK 100 THE DEPOSITION ID IS D_1300007473. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9774 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48209 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.180 REMARK 200 RESOLUTION RANGE LOW (A) : 56.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.8 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.55100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5XJ1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM ACETATE, 0.1M SODIUM REMARK 280 ACETATE, PH5.2, 20%(W/V) PEG3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP B 26 CG OD1 OD2 REMARK 470 LYS B 50 CG CD CE NZ REMARK 470 LYS B 51 CG CD CE NZ REMARK 470 LYS B 59 CG CD CE NZ REMARK 470 GLN B 69 CG CD OE1 NE2 REMARK 470 ASP B 70 CG OD1 OD2 REMARK 470 LEU B 71 CG CD1 CD2 REMARK 470 LEU B 73 CG CD1 CD2 REMARK 470 LEU B 76 CG CD1 CD2 REMARK 470 MET B 154 CG SD CE REMARK 470 ASP B 167 CG OD1 OD2 REMARK 470 LYS B 188 CG CD CE NZ REMARK 470 LYS B 254 CG CD CE NZ REMARK 470 LEU B 334 CG CD1 CD2 REMARK 470 GLU B 337 CG CD OE1 OE2 REMARK 470 LYS B 366 CG CD CE NZ REMARK 470 LYS B 367 CG CD CE NZ REMARK 470 LEU B 369 CG CD1 CD2 REMARK 470 LYS B 370 CG CD CE NZ REMARK 470 GLU B 371 CG CD OE1 OE2 REMARK 470 GLN B 374 CG CD OE1 NE2 REMARK 470 LYS B 428 CG CD CE NZ REMARK 470 LYS A 4 CG CD CE NZ REMARK 470 ASP A 14 CG OD1 OD2 REMARK 470 GLU A 18 CG CD OE1 OE2 REMARK 470 ASP A 26 CG OD1 OD2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 VAL A 48 CG1 CG2 REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 LYS A 56 CG CD CE NZ REMARK 470 GLU A 58 CG CD OE1 OE2 REMARK 470 LYS A 59 CG CD CE NZ REMARK 470 GLN A 69 CG CD OE1 NE2 REMARK 470 ASP A 70 CG OD1 OD2 REMARK 470 LEU A 73 CG CD1 CD2 REMARK 470 TYR A 75 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 76 CG CD1 CD2 REMARK 470 ARG A 77 CG CD NE CZ NH1 NH2 REMARK 470 SER A 78 OG REMARK 470 ILE A 80 CG1 CG2 CD1 REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 LYS A 100 CG CD CE NZ REMARK 470 LYS A 105 CG CD CE NZ REMARK 470 ILE A 109 CG1 CG2 CD1 REMARK 470 ARG A 136 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 188 CG CD CE NZ REMARK 470 GLU A 189 CG CD OE1 OE2 REMARK 470 ASP A 223 CG OD1 OD2 REMARK 470 GLU A 227 CG CD OE1 OE2 REMARK 470 LYS A 231 CG CD CE NZ REMARK 470 GLU A 235 CG CD OE1 OE2 REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 ARG A 257 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 273 CG OD1 OD2 REMARK 470 GLU A 287 CG CD OE1 OE2 REMARK 470 LEU A 320 CG CD1 CD2 REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 LEU A 334 CG CD1 CD2 REMARK 470 ILE A 335 CG1 CG2 CD1 REMARK 470 LEU A 348 CG CD1 CD2 REMARK 470 LYS A 366 CG CD CE NZ REMARK 470 LYS A 367 CG CD CE NZ REMARK 470 LEU A 369 CG CD1 CD2 REMARK 470 LYS A 370 CG CD CE NZ REMARK 470 GLU A 371 CG CD OE1 OE2 REMARK 470 THR A 388 OG1 CG2 REMARK 470 SER A 395 OG REMARK 470 GLU A 426 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 451 O HOH A 601 1.98 REMARK 500 OH TYR A 293 O SAH A 501 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 U C 746 O3' MUM C 747 P -0.104 REMARK 500 MUM C 747 O3' G C 748 P -0.107 REMARK 500 U D 746 O3' MUM D 747 P -0.105 REMARK 500 MUM D 747 O3' G D 748 P -0.134 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 U C 746 C3' - O3' - P ANGL. DEV. = 9.7 DEGREES REMARK 500 MUM C 747 C3' - O3' - P ANGL. DEV. = 15.9 DEGREES REMARK 500 G C 748 O3' - P - OP1 ANGL. DEV. = 7.0 DEGREES REMARK 500 A C 751 C2' - C3' - O3' ANGL. DEV. = 9.8 DEGREES REMARK 500 MUM D 747 C3' - O3' - P ANGL. DEV. = 18.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 5 58.68 19.65 REMARK 500 HIS B 17 -52.39 -28.48 REMARK 500 SER B 38 -33.80 90.15 REMARK 500 ASN B 49 -151.65 -103.62 REMARK 500 LYS B 51 -61.12 121.49 REMARK 500 ASP B 70 -114.26 53.97 REMARK 500 ASP B 72 126.48 155.34 REMARK 500 LEU B 73 67.72 11.24 REMARK 500 TYR B 75 13.25 52.19 REMARK 500 ARG B 77 -82.20 53.43 REMARK 500 SER B 78 -45.37 62.07 REMARK 500 ILE B 80 -71.05 -53.48 REMARK 500 ALA B 81 79.37 -111.85 REMARK 500 PRO B 123 45.69 -79.59 REMARK 500 PHE B 160 -59.51 80.55 REMARK 500 ASP B 181 61.08 35.23 REMARK 500 ILE B 318 -70.29 -77.50 REMARK 500 ASP B 359 179.13 171.16 REMARK 500 LEU B 451 -76.16 -79.47 REMARK 500 LYS A 4 138.15 -39.73 REMARK 500 ASN A 5 58.56 20.52 REMARK 500 HIS A 17 -53.32 -28.35 REMARK 500 SER A 38 -35.06 91.09 REMARK 500 ASN A 49 -152.20 -104.16 REMARK 500 LYS A 51 -61.04 121.15 REMARK 500 ASP A 72 79.20 88.48 REMARK 500 ALA A 74 72.10 51.33 REMARK 500 TYR A 75 -122.36 53.36 REMARK 500 ARG A 77 -38.79 135.09 REMARK 500 SER A 78 6.37 57.56 REMARK 500 ALA A 81 78.88 -109.86 REMARK 500 PRO A 123 45.42 -79.89 REMARK 500 PHE A 160 -59.33 80.95 REMARK 500 ASP A 181 61.84 35.04 REMARK 500 ARG A 221 22.21 80.78 REMARK 500 ILE A 318 -70.12 -77.88 REMARK 500 ASP A 359 179.90 170.50 REMARK 500 LEU A 451 -79.64 -82.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN B 5 ASP B 6 144.23 REMARK 500 ASN A 5 ASP A 6 144.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 147 0.08 SIDE CHAIN REMARK 500 ARG B 402 0.09 SIDE CHAIN REMARK 500 ARG A 44 0.11 SIDE CHAIN REMARK 500 ARG A 402 0.09 SIDE CHAIN REMARK 500 ARG A 415 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 631 DISTANCE = 6.16 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 502 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 17 NE2 REMARK 620 2 HIS B 440 NE2 108.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 502 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 17 NE2 REMARK 620 2 HIS A 440 NE2 107.7 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide MUM C 747 and G C REMARK 800 748 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide MUM D 747 and G D REMARK 800 748 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ZQ0 RELATED DB: PDB DBREF 5ZQ8 B 1 454 UNP Q97R12 Y1029_STRPN 1 454 DBREF 5ZQ8 A 1 454 UNP Q97R12 Y1029_STRPN 1 454 DBREF 5ZQ8 C 743 754 PDB 5ZQ8 5ZQ8 743 754 DBREF 5ZQ8 D 743 754 PDB 5ZQ8 5ZQ8 743 754 SEQADV 5ZQ8 GLN B 443 UNP Q97R12 GLU 443 ENGINEERED MUTATION SEQADV 5ZQ8 GLN A 443 UNP Q97R12 GLU 443 ENGINEERED MUTATION SEQRES 1 B 454 MET LEU LYS LYS ASN ASP ILE VAL GLU VAL GLU ILE VAL SEQRES 2 B 454 ASP LEU THR HIS GLU GLY ALA GLY VAL ALA LYS VAL ASP SEQRES 3 B 454 GLY LEU VAL PHE PHE VAL GLU ASN ALA LEU PRO SER GLU SEQRES 4 B 454 LYS ILE LEU MET ARG VAL LEU LYS VAL ASN LYS LYS ILE SEQRES 5 B 454 GLY PHE GLY LYS VAL GLU LYS TYR LEU VAL GLN SER PRO SEQRES 6 B 454 HIS ARG ASN GLN ASP LEU ASP LEU ALA TYR LEU ARG SER SEQRES 7 B 454 GLY ILE ALA ASP LEU GLY HIS LEU SER TYR PRO GLU GLN SEQRES 8 B 454 LEU LYS PHE LYS THR LYS GLN VAL LYS ASP SER LEU TYR SEQRES 9 B 454 LYS ILE ALA GLY ILE ALA ASP VAL GLU VAL ALA GLU THR SEQRES 10 B 454 LEU GLY MET GLU HIS PRO VAL LYS TYR ARG ASN LYS ALA SEQRES 11 B 454 GLN VAL PRO VAL ARG ARG VAL ASN GLY VAL LEU GLU THR SEQRES 12 B 454 GLY PHE PHE ARG LYS ASN SER HIS ASN LEU MET PRO LEU SEQRES 13 B 454 GLU ASP PHE PHE ILE GLN ASP PRO VAL ILE ASP GLN VAL SEQRES 14 B 454 VAL VAL ALA LEU ARG ASP LEU LEU ARG ARG PHE ASP LEU SEQRES 15 B 454 LYS PRO TYR ASP GLU LYS GLU GLN SER GLY LEU ILE ARG SEQRES 16 B 454 ASN LEU VAL VAL ARG ARG GLY HIS TYR SER GLY GLN ILE SEQRES 17 B 454 MET VAL VAL LEU VAL THR THR ARG PRO LYS VAL PHE ARG SEQRES 18 B 454 VAL ASP GLN LEU ILE GLU GLN VAL ILE LYS GLN PHE PRO SEQRES 19 B 454 GLU ILE VAL SER VAL MET GLN ASN ILE ASN ASP GLN ASN SEQRES 20 B 454 THR ASN ALA ILE PHE GLY LYS GLU TRP ARG THR LEU TYR SEQRES 21 B 454 GLY GLN ASP TYR ILE THR ASP GLN MET LEU GLY ASN ASP SEQRES 22 B 454 PHE GLN ILE ALA GLY PRO ALA PHE TYR GLN VAL ASN THR SEQRES 23 B 454 GLU MET ALA GLU LYS LEU TYR GLN THR ALA ILE ASP PHE SEQRES 24 B 454 ALA GLU LEU LYS LYS ASP ASP VAL ILE ILE ASP ALA TYR SEQRES 25 B 454 SER GLY ILE GLY THR ILE GLY LEU SER VAL ALA LYS HIS SEQRES 26 B 454 VAL LYS GLU VAL TYR GLY VAL GLU LEU ILE PRO GLU ALA SEQRES 27 B 454 VAL GLU ASN SER GLN LYS ASN ALA SER LEU ASN LYS ILE SEQRES 28 B 454 THR ASN ALA HIS TYR VAL CYS ASP THR ALA GLU ASN ALA SEQRES 29 B 454 MET LYS LYS TRP LEU LYS GLU GLY ILE GLN PRO THR VAL SEQRES 30 B 454 ILE LEU VAL ASP PRO PRO ARG LYS GLY LEU THR GLU SER SEQRES 31 B 454 PHE ILE LYS ALA SER ALA GLN THR GLY ALA ASP ARG ILE SEQRES 32 B 454 ALA TYR ILE SER CYS ASN VAL ALA THR MET ALA ARG ASP SEQRES 33 B 454 ILE LYS LEU TYR GLN GLU LEU GLY TYR GLU LEU LYS LYS SEQRES 34 B 454 VAL GLN PRO VAL ASP LEU PHE PRO GLN THR HIS HIS VAL SEQRES 35 B 454 GLN THR VAL ALA LEU LEU SER LYS LEU ASP VAL ASP SEQRES 1 A 454 MET LEU LYS LYS ASN ASP ILE VAL GLU VAL GLU ILE VAL SEQRES 2 A 454 ASP LEU THR HIS GLU GLY ALA GLY VAL ALA LYS VAL ASP SEQRES 3 A 454 GLY LEU VAL PHE PHE VAL GLU ASN ALA LEU PRO SER GLU SEQRES 4 A 454 LYS ILE LEU MET ARG VAL LEU LYS VAL ASN LYS LYS ILE SEQRES 5 A 454 GLY PHE GLY LYS VAL GLU LYS TYR LEU VAL GLN SER PRO SEQRES 6 A 454 HIS ARG ASN GLN ASP LEU ASP LEU ALA TYR LEU ARG SER SEQRES 7 A 454 GLY ILE ALA ASP LEU GLY HIS LEU SER TYR PRO GLU GLN SEQRES 8 A 454 LEU LYS PHE LYS THR LYS GLN VAL LYS ASP SER LEU TYR SEQRES 9 A 454 LYS ILE ALA GLY ILE ALA ASP VAL GLU VAL ALA GLU THR SEQRES 10 A 454 LEU GLY MET GLU HIS PRO VAL LYS TYR ARG ASN LYS ALA SEQRES 11 A 454 GLN VAL PRO VAL ARG ARG VAL ASN GLY VAL LEU GLU THR SEQRES 12 A 454 GLY PHE PHE ARG LYS ASN SER HIS ASN LEU MET PRO LEU SEQRES 13 A 454 GLU ASP PHE PHE ILE GLN ASP PRO VAL ILE ASP GLN VAL SEQRES 14 A 454 VAL VAL ALA LEU ARG ASP LEU LEU ARG ARG PHE ASP LEU SEQRES 15 A 454 LYS PRO TYR ASP GLU LYS GLU GLN SER GLY LEU ILE ARG SEQRES 16 A 454 ASN LEU VAL VAL ARG ARG GLY HIS TYR SER GLY GLN ILE SEQRES 17 A 454 MET VAL VAL LEU VAL THR THR ARG PRO LYS VAL PHE ARG SEQRES 18 A 454 VAL ASP GLN LEU ILE GLU GLN VAL ILE LYS GLN PHE PRO SEQRES 19 A 454 GLU ILE VAL SER VAL MET GLN ASN ILE ASN ASP GLN ASN SEQRES 20 A 454 THR ASN ALA ILE PHE GLY LYS GLU TRP ARG THR LEU TYR SEQRES 21 A 454 GLY GLN ASP TYR ILE THR ASP GLN MET LEU GLY ASN ASP SEQRES 22 A 454 PHE GLN ILE ALA GLY PRO ALA PHE TYR GLN VAL ASN THR SEQRES 23 A 454 GLU MET ALA GLU LYS LEU TYR GLN THR ALA ILE ASP PHE SEQRES 24 A 454 ALA GLU LEU LYS LYS ASP ASP VAL ILE ILE ASP ALA TYR SEQRES 25 A 454 SER GLY ILE GLY THR ILE GLY LEU SER VAL ALA LYS HIS SEQRES 26 A 454 VAL LYS GLU VAL TYR GLY VAL GLU LEU ILE PRO GLU ALA SEQRES 27 A 454 VAL GLU ASN SER GLN LYS ASN ALA SER LEU ASN LYS ILE SEQRES 28 A 454 THR ASN ALA HIS TYR VAL CYS ASP THR ALA GLU ASN ALA SEQRES 29 A 454 MET LYS LYS TRP LEU LYS GLU GLY ILE GLN PRO THR VAL SEQRES 30 A 454 ILE LEU VAL ASP PRO PRO ARG LYS GLY LEU THR GLU SER SEQRES 31 A 454 PHE ILE LYS ALA SER ALA GLN THR GLY ALA ASP ARG ILE SEQRES 32 A 454 ALA TYR ILE SER CYS ASN VAL ALA THR MET ALA ARG ASP SEQRES 33 A 454 ILE LYS LEU TYR GLN GLU LEU GLY TYR GLU LEU LYS LYS SEQRES 34 A 454 VAL GLN PRO VAL ASP LEU PHE PRO GLN THR HIS HIS VAL SEQRES 35 A 454 GLN THR VAL ALA LEU LEU SER LYS LEU ASP VAL ASP SEQRES 1 C 12 C C G U MUM G A A A A G G SEQRES 1 D 12 C C G U MUM G A A A A G G HET MUM C 747 21 HET MUM D 747 21 HET SAH B 501 26 HET NI B 502 1 HET SAH A 501 26 HET NI A 502 1 HETNAM MUM 5'-O-(DIHYDROXYPHOSPHANYL)-5-METHYL-5,6-DIHYDROURIDINE HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM NI NICKEL (II) ION FORMUL 3 MUM 2(C10 H17 N2 O8 P) FORMUL 5 SAH 2(C14 H20 N6 O5 S) FORMUL 6 NI 2(NI 2+) FORMUL 9 HOH *67(H2 O) HELIX 1 AA1 SER B 87 GLY B 108 1 22 HELIX 2 AA2 ASP B 163 PHE B 180 1 18 HELIX 3 AA3 ARG B 221 PHE B 233 1 13 HELIX 4 AA4 ASN B 285 GLU B 301 1 17 HELIX 5 AA5 ILE B 318 ALA B 323 1 6 HELIX 6 AA6 LYS B 324 VAL B 326 5 3 HELIX 7 AA7 ILE B 335 ASN B 349 1 15 HELIX 8 AA8 THR B 360 GLY B 372 1 13 HELIX 9 AA9 THR B 388 GLN B 397 1 10 HELIX 10 AB1 ASN B 409 GLU B 422 1 14 HELIX 11 AB2 SER A 87 GLY A 108 1 22 HELIX 12 AB3 ASP A 163 PHE A 180 1 18 HELIX 13 AB4 ARG A 221 PHE A 233 1 13 HELIX 14 AB5 ASN A 285 GLU A 301 1 17 HELIX 15 AB6 ILE A 318 ALA A 323 1 6 HELIX 16 AB7 LYS A 324 VAL A 326 5 3 HELIX 17 AB8 ILE A 335 ASN A 349 1 15 HELIX 18 AB9 THR A 360 GLY A 372 1 13 HELIX 19 AC1 THR A 388 GLN A 397 1 10 HELIX 20 AC2 ASN A 409 GLU A 422 1 14 SHEET 1 AA1 6 ILE B 7 LEU B 15 0 SHEET 2 AA1 6 GLY B 21 VAL B 25 -1 O VAL B 22 N ASP B 14 SHEET 3 AA1 6 LEU B 28 VAL B 32 -1 O PHE B 30 N ALA B 23 SHEET 4 AA1 6 ILE B 52 VAL B 62 1 O GLY B 53 N PHE B 31 SHEET 5 AA1 6 LYS B 40 VAL B 48 -1 N LEU B 46 O PHE B 54 SHEET 6 AA1 6 ILE B 7 LEU B 15 -1 N VAL B 8 O MET B 43 SHEET 1 AA2 7 LEU B 153 PRO B 155 0 SHEET 2 AA2 7 VAL B 140 PHE B 146 -1 N PHE B 145 O MET B 154 SHEET 3 AA2 7 LYS B 129 VAL B 137 -1 N ARG B 135 O GLU B 142 SHEET 4 AA2 7 ILE B 194 ARG B 201 -1 O LEU B 197 N VAL B 132 SHEET 5 AA2 7 ILE B 208 THR B 214 -1 O VAL B 211 N VAL B 198 SHEET 6 AA2 7 ILE B 236 ILE B 243 1 O ASN B 242 N THR B 214 SHEET 7 AA2 7 GLU B 255 GLY B 261 -1 O ARG B 257 N GLN B 241 SHEET 1 AA3 2 ILE B 265 MET B 269 0 SHEET 2 AA3 2 ASN B 272 ILE B 276 -1 O PHE B 274 N ASP B 267 SHEET 1 AA4 7 ALA B 354 CYS B 358 0 SHEET 2 AA4 7 GLU B 328 GLU B 333 1 N VAL B 329 O HIS B 355 SHEET 3 AA4 7 VAL B 307 ALA B 311 1 N ASP B 310 O TYR B 330 SHEET 4 AA4 7 VAL B 377 VAL B 380 1 O LEU B 379 N ILE B 309 SHEET 5 AA4 7 ARG B 402 SER B 407 1 O ILE B 406 N VAL B 380 SHEET 6 AA4 7 GLN B 443 LYS B 450 -1 O LEU B 448 N ILE B 403 SHEET 7 AA4 7 TYR B 425 VAL B 433 -1 N VAL B 433 O GLN B 443 SHEET 1 AA5 6 ILE A 7 GLU A 11 0 SHEET 2 AA5 6 LYS A 40 VAL A 48 -1 O MET A 43 N VAL A 8 SHEET 3 AA5 6 ILE A 52 VAL A 62 -1 O PHE A 54 N LEU A 46 SHEET 4 AA5 6 LEU A 28 VAL A 32 1 N PHE A 31 O GLY A 53 SHEET 5 AA5 6 GLY A 21 VAL A 25 -1 N ALA A 23 O PHE A 30 SHEET 6 AA5 6 ASP A 14 LEU A 15 -1 N ASP A 14 O VAL A 22 SHEET 1 AA6 7 LEU A 153 PRO A 155 0 SHEET 2 AA6 7 VAL A 140 PHE A 146 -1 N PHE A 145 O MET A 154 SHEET 3 AA6 7 LYS A 129 VAL A 137 -1 N ARG A 135 O GLU A 142 SHEET 4 AA6 7 ILE A 194 ARG A 201 -1 O LEU A 197 N VAL A 132 SHEET 5 AA6 7 ILE A 208 THR A 214 -1 O VAL A 211 N VAL A 198 SHEET 6 AA6 7 ILE A 236 ILE A 243 1 O ASN A 242 N THR A 214 SHEET 7 AA6 7 GLU A 255 GLY A 261 -1 O ARG A 257 N GLN A 241 SHEET 1 AA7 2 ILE A 265 MET A 269 0 SHEET 2 AA7 2 ASN A 272 ILE A 276 -1 O PHE A 274 N ASP A 267 SHEET 1 AA8 7 ALA A 354 CYS A 358 0 SHEET 2 AA8 7 GLU A 328 GLU A 333 1 N VAL A 329 O HIS A 355 SHEET 3 AA8 7 VAL A 307 ALA A 311 1 N ASP A 310 O TYR A 330 SHEET 4 AA8 7 VAL A 377 VAL A 380 1 O LEU A 379 N ILE A 309 SHEET 5 AA8 7 ARG A 402 SER A 407 1 O ILE A 406 N VAL A 380 SHEET 6 AA8 7 GLN A 443 LYS A 450 -1 O LEU A 448 N ILE A 403 SHEET 7 AA8 7 TYR A 425 VAL A 433 -1 N VAL A 433 O GLN A 443 LINK SG CYS B 408 C6 MUM C 747 1555 1555 1.68 LINK SG CYS A 408 C6 MUM D 747 1555 1555 1.70 LINK O3' U C 746 P MUM C 747 1555 1555 1.50 LINK O3' MUM C 747 P G C 748 1555 1555 1.50 LINK O3' U D 746 P MUM D 747 1555 1555 1.50 LINK O3' MUM D 747 P G D 748 1555 1555 1.47 LINK NE2 HIS B 17 NI NI B 502 1555 1555 2.49 LINK NE2 HIS B 440 NI NI B 502 1555 1555 2.30 LINK NE2 HIS A 17 NI NI A 502 1555 1555 2.58 LINK NE2 HIS A 440 NI NI A 502 1555 1555 2.24 CISPEP 1 GLN B 69 ASP B 70 0 -22.36 CISPEP 2 LEU B 71 ASP B 72 0 12.33 CISPEP 3 ALA B 74 TYR B 75 0 29.77 CISPEP 4 ALA A 74 TYR A 75 0 -19.87 SITE 1 AC1 11 PHE B 281 TYR B 293 TYR B 312 SER B 313 SITE 2 AC1 11 ILE B 315 THR B 317 GLU B 333 LEU B 334 SITE 3 AC1 11 THR B 360 ALA B 361 ASP B 381 SITE 1 AC2 2 HIS B 17 HIS B 440 SITE 1 AC3 12 PHE A 281 GLN A 283 TYR A 293 TYR A 312 SITE 2 AC3 12 SER A 313 THR A 317 ILE A 318 LEU A 334 SITE 3 AC3 12 ALA A 361 ASP A 381 HOH A 604 MUM D 747 SITE 1 AC4 2 HIS A 17 HIS A 440 SITE 1 AC5 25 ILE B 80 ARG B 127 LYS B 129 ALA B 130 SITE 2 AC5 25 GLN B 131 PHE B 145 ILE B 161 GLN B 162 SITE 3 AC5 25 PHE B 281 GLN B 283 ASP B 381 PRO B 382 SITE 4 AC5 25 ARG B 384 CYS B 408 PHE B 436 HIS B 441 SITE 5 AC5 25 GLN B 443 HOH B 616 HOH B 617 U C 746 SITE 6 AC5 25 A C 749 A C 750 HOH C 802 HOH C 803 SITE 7 AC5 25 HOH C 804 SITE 1 AC6 24 GLY A 79 ILE A 80 ARG A 127 LYS A 129 SITE 2 AC6 24 ALA A 130 GLN A 131 PHE A 145 ILE A 161 SITE 3 AC6 24 GLN A 162 PHE A 281 GLN A 283 ASP A 381 SITE 4 AC6 24 PRO A 382 ARG A 384 CYS A 408 PHE A 436 SITE 5 AC6 24 HIS A 441 GLN A 443 SAH A 501 U D 746 SITE 6 AC6 24 A D 749 A D 750 HOH D 801 HOH D 802 CRYST1 62.230 62.259 79.818 74.58 85.47 65.03 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016069 -0.007483 0.000678 0.00000 SCALE2 0.000000 0.017718 -0.004720 0.00000 SCALE3 0.000000 0.000000 0.013006 0.00000