HEADER LYASE 19-APR-18 5ZQI TITLE ALGINATE LYASE ALGAT5 FROM POLYSACCHARIDE LYASE FAMILY 7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALGINATE LYASE ALGAT5; COMPND 3 CHAIN: A; COMPND 4 EC: 4.2.2.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEFLUVIITALEA; SOURCE 3 ORGANISM_TAXID: 1185408; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS ALGINATE LYASE, PL7, B-SANDWICH FOLD, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR H.SU,S.DONG,Y.G.FENG,S.Q.JI,M.LU,F.L.LI REVDAT 2 22-NOV-23 5ZQI 1 REMARK REVDAT 1 24-APR-19 5ZQI 0 JRNL AUTH H.SU,S.DONG,Y.G.FENG,S.Q.JI,M.LU,F.L.LI JRNL TITL ALGINATE LYASE ALGAT5 FROM POLYSACCHARIDE LYASE FAMILY 7 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.Q.JI,B.WANG,M.LU,F.L.LI REMARK 1 TITL DEFLUVIITALEA PHAPHYPHILA SP. NOV., A NOVEL THERMOPHILIC REMARK 1 TITL 2 BACTERIUM THAT DEGRADES BROWN ALGAE. REMARK 1 REF APPL. ENVIRON. MICROBIOL. V. 82 868 2016 REMARK 1 REFN ESSN 1098-5336 REMARK 1 PMID 26590273 REMARK 1 DOI 10.1128/AEM.03297-15 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13-2998_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 40560 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.2302 - 3.6089 0.67 2051 107 0.2143 0.2059 REMARK 3 2 3.6089 - 2.8671 0.95 2769 143 0.1586 0.1815 REMARK 3 3 2.8671 - 2.5054 1.00 2881 149 0.1557 0.1590 REMARK 3 4 2.5054 - 2.2767 1.00 2849 148 0.1528 0.1665 REMARK 3 5 2.2767 - 2.1137 1.00 2829 147 0.1833 0.2225 REMARK 3 6 2.1137 - 1.9892 1.00 2838 147 0.1545 0.1907 REMARK 3 7 1.9892 - 1.8896 0.99 2818 146 0.2020 0.2250 REMARK 3 8 1.8896 - 1.8074 0.99 2812 146 0.1561 0.1915 REMARK 3 9 1.8074 - 1.7379 1.00 2785 145 0.1576 0.1746 REMARK 3 10 1.7379 - 1.6779 0.99 2818 145 0.1476 0.1803 REMARK 3 11 1.6779 - 1.6255 0.99 2779 145 0.1425 0.1654 REMARK 3 12 1.6255 - 1.5791 0.99 2795 145 0.1490 0.1742 REMARK 3 13 1.5791 - 1.5375 0.99 2764 143 0.1524 0.1697 REMARK 3 14 1.5375 - 1.5000 0.99 2772 144 0.1657 0.2049 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8214 41.1340 32.3617 REMARK 3 T TENSOR REMARK 3 T11: 0.0796 T22: 0.0662 REMARK 3 T33: 0.0481 T12: -0.0100 REMARK 3 T13: 0.0303 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 2.0462 L22: 3.3136 REMARK 3 L33: 2.4906 L12: -0.4616 REMARK 3 L13: 0.0723 L23: -0.5292 REMARK 3 S TENSOR REMARK 3 S11: 0.0553 S12: -0.1630 S13: 0.0745 REMARK 3 S21: 0.1539 S22: 0.0212 S23: 0.0511 REMARK 3 S31: -0.1004 S32: -0.0487 S33: -0.0576 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9536 33.5049 29.8528 REMARK 3 T TENSOR REMARK 3 T11: 0.0449 T22: 0.0516 REMARK 3 T33: 0.0566 T12: 0.0083 REMARK 3 T13: -0.0100 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.5648 L22: 3.4550 REMARK 3 L33: 2.3906 L12: -0.0069 REMARK 3 L13: -0.6416 L23: -0.2271 REMARK 3 S TENSOR REMARK 3 S11: 0.0807 S12: -0.0607 S13: -0.1443 REMARK 3 S21: 0.0720 S22: -0.0492 S23: -0.0342 REMARK 3 S31: 0.0894 S32: -0.0000 S33: -0.0349 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8039 36.6541 17.8075 REMARK 3 T TENSOR REMARK 3 T11: 0.0452 T22: 0.0519 REMARK 3 T33: 0.0704 T12: -0.0089 REMARK 3 T13: 0.0058 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 1.4536 L22: 1.3734 REMARK 3 L33: 1.4295 L12: -0.3478 REMARK 3 L13: 0.4866 L23: -0.4319 REMARK 3 S TENSOR REMARK 3 S11: 0.0301 S12: 0.0864 S13: -0.0985 REMARK 3 S21: 0.0067 S22: 0.0254 S23: 0.0625 REMARK 3 S31: 0.0171 S32: 0.0081 S33: -0.0481 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0011 29.9486 10.4667 REMARK 3 T TENSOR REMARK 3 T11: 0.0928 T22: 0.1110 REMARK 3 T33: 0.1306 T12: 0.0368 REMARK 3 T13: 0.0004 T23: -0.0429 REMARK 3 L TENSOR REMARK 3 L11: 1.7545 L22: 6.2961 REMARK 3 L33: 4.9889 L12: -0.5791 REMARK 3 L13: -1.3114 L23: -1.5027 REMARK 3 S TENSOR REMARK 3 S11: 0.0222 S12: 0.2289 S13: -0.2202 REMARK 3 S21: -0.3338 S22: 0.0343 S23: -0.0295 REMARK 3 S31: 0.2601 S32: 0.2478 S33: -0.0548 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 171 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.0812 39.1541 11.3517 REMARK 3 T TENSOR REMARK 3 T11: 0.0591 T22: 0.0794 REMARK 3 T33: 0.0726 T12: -0.0037 REMARK 3 T13: 0.0082 T23: -0.0260 REMARK 3 L TENSOR REMARK 3 L11: 1.2436 L22: 0.7690 REMARK 3 L33: 1.7371 L12: 0.0141 REMARK 3 L13: 0.4712 L23: -0.3061 REMARK 3 S TENSOR REMARK 3 S11: -0.0145 S12: 0.1598 S13: -0.0594 REMARK 3 S21: -0.0717 S22: 0.0201 S23: -0.0740 REMARK 3 S31: 0.0045 S32: 0.1837 S33: -0.0076 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 243 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3266 32.7994 25.0540 REMARK 3 T TENSOR REMARK 3 T11: 0.0595 T22: 0.0648 REMARK 3 T33: 0.0514 T12: 0.0090 REMARK 3 T13: 0.0241 T23: -0.0163 REMARK 3 L TENSOR REMARK 3 L11: 1.1809 L22: 4.6308 REMARK 3 L33: 1.4296 L12: -0.7914 REMARK 3 L13: 0.7254 L23: -0.9732 REMARK 3 S TENSOR REMARK 3 S11: 0.0300 S12: -0.0261 S13: -0.1126 REMARK 3 S21: 0.1909 S22: 0.0215 S23: -0.1323 REMARK 3 S31: 0.0578 S32: 0.0411 S33: -0.0434 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZQI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-APR-18. REMARK 100 THE DEPOSITION ID IS D_1300007494. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40624 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 41.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.18100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.31600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1UAI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M POTASSIUM NITRATE, 20% PEG3350, REMARK 280 PH6.8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.01000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.95500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.19000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.95500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.01000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.19000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -25 REMARK 465 HIS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 GLY A -16 REMARK 465 LEU A -15 REMARK 465 VAL A -14 REMARK 465 PRO A -13 REMARK 465 ARG A -12 REMARK 465 GLY A -11 REMARK 465 SER A -10 REMARK 465 GLY A -9 REMARK 465 MET A -8 REMARK 465 LYS A -7 REMARK 465 GLU A -6 REMARK 465 THR A -5 REMARK 465 ALA A -4 REMARK 465 ALA A -3 REMARK 465 ALA A -2 REMARK 465 LYS A -1 REMARK 465 PHE A 0 REMARK 465 GLU A 1 REMARK 465 ARG A 2 REMARK 465 GLN A 3 REMARK 465 HIS A 4 REMARK 465 MET A 5 REMARK 465 ASP A 6 REMARK 465 SER A 7 REMARK 465 PRO A 8 REMARK 465 ASP A 9 REMARK 465 LEU A 10 REMARK 465 GLY A 11 REMARK 465 THR A 12 REMARK 465 ASP A 13 REMARK 465 ASP A 14 REMARK 465 ASP A 15 REMARK 465 ASP A 16 REMARK 465 LYS A 17 REMARK 465 ALA A 18 REMARK 465 MET A 19 REMARK 465 ALA A 20 REMARK 465 ASP A 21 REMARK 465 ILE A 22 REMARK 465 GLY A 23 REMARK 465 SER A 24 REMARK 465 GLU A 25 REMARK 465 PHE A 26 REMARK 465 MET A 27 REMARK 465 ALA A 28 REMARK 465 GLU A 245 REMARK 465 HIS A 246 REMARK 465 HIS A 247 REMARK 465 HIS A 248 REMARK 465 HIS A 249 REMARK 465 HIS A 250 REMARK 465 HIS A 251 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 700 O HOH A 801 1.81 REMARK 500 O HOH A 809 O HOH A 920 1.83 REMARK 500 O HOH A 578 O HOH A 579 1.83 REMARK 500 O HOH A 410 O HOH A 634 1.84 REMARK 500 O HOH A 962 O HOH A 965 1.87 REMARK 500 O HOH A 424 O HOH A 429 1.87 REMARK 500 O HOH A 873 O HOH A 909 1.88 REMARK 500 O HOH A 441 O HOH A 865 1.89 REMARK 500 O HOH A 883 O HOH A 951 1.91 REMARK 500 O HOH A 541 O HOH A 750 1.92 REMARK 500 O HOH A 581 O HOH A 751 1.92 REMARK 500 O HOH A 432 O HOH A 782 1.92 REMARK 500 O HOH A 644 O HOH A 853 1.95 REMARK 500 O HOH A 548 O HOH A 863 1.95 REMARK 500 O HOH A 672 O HOH A 699 1.97 REMARK 500 O HOH A 451 O HOH A 699 1.97 REMARK 500 O HOH A 854 O HOH A 862 1.98 REMARK 500 O HOH A 502 O HOH A 890 1.98 REMARK 500 O HOH A 944 O HOH A 946 1.98 REMARK 500 O HOH A 891 O HOH A 960 2.00 REMARK 500 O HOH A 737 O HOH A 830 2.00 REMARK 500 O HOH A 774 O HOH A 819 2.01 REMARK 500 O HOH A 484 O HOH A 794 2.01 REMARK 500 O HOH A 431 O HOH A 449 2.02 REMARK 500 O HOH A 838 O HOH A 942 2.02 REMARK 500 O HOH A 788 O HOH A 874 2.02 REMARK 500 O HOH A 728 O HOH A 808 2.02 REMARK 500 O HOH A 491 O HOH A 556 2.02 REMARK 500 O HOH A 880 O HOH A 935 2.03 REMARK 500 O HOH A 625 O HOH A 755 2.03 REMARK 500 O HOH A 439 O HOH A 764 2.05 REMARK 500 O HOH A 823 O HOH A 853 2.05 REMARK 500 O HOH A 451 O HOH A 659 2.05 REMARK 500 O HOH A 888 O HOH A 920 2.05 REMARK 500 O HOH A 419 O HOH A 755 2.05 REMARK 500 O HOH A 805 O HOH A 842 2.06 REMARK 500 O HOH A 509 O HOH A 523 2.07 REMARK 500 O HOH A 727 O HOH A 782 2.08 REMARK 500 O HOH A 971 O HOH A 973 2.09 REMARK 500 O HOH A 754 O HOH A 775 2.10 REMARK 500 O HOH A 722 O HOH A 799 2.10 REMARK 500 O HOH A 458 O HOH A 581 2.11 REMARK 500 O HOH A 534 O HOH A 748 2.11 REMARK 500 O HOH A 723 O HOH A 745 2.12 REMARK 500 O HOH A 473 O HOH A 731 2.14 REMARK 500 O HOH A 616 O HOH A 776 2.14 REMARK 500 O HOH A 554 O HOH A 784 2.14 REMARK 500 O HOH A 468 O HOH A 925 2.14 REMARK 500 O HOH A 781 O HOH A 799 2.16 REMARK 500 O HOH A 406 O HOH A 427 2.17 REMARK 500 REMARK 500 THIS ENTRY HAS 53 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 855 O HOH A 873 3645 1.87 REMARK 500 O HOH A 498 O HOH A 619 3655 2.06 REMARK 500 O HOH A 896 O HOH A 900 2565 2.12 REMARK 500 O HOH A 930 O HOH A 970 2565 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 40 49.00 -109.11 REMARK 500 VAL A 131 -63.10 -90.46 REMARK 500 ASP A 142 -162.12 -120.28 REMARK 500 SER A 186 145.54 -176.76 REMARK 500 GLN A 218 51.73 -90.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN A 139 ILE A 140 147.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 960 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A 961 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A 962 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A 963 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A 964 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH A 965 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH A 966 DISTANCE = 6.98 ANGSTROMS REMARK 525 HOH A 967 DISTANCE = 7.00 ANGSTROMS REMARK 525 HOH A 968 DISTANCE = 7.44 ANGSTROMS REMARK 525 HOH A 969 DISTANCE = 7.85 ANGSTROMS REMARK 525 HOH A 970 DISTANCE = 8.15 ANGSTROMS REMARK 525 HOH A 971 DISTANCE = 10.34 ANGSTROMS REMARK 525 HOH A 972 DISTANCE = 10.36 ANGSTROMS REMARK 525 HOH A 973 DISTANCE = 10.60 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 DBREF 5ZQI A -25 251 PDB 5ZQI 5ZQI -25 251 SEQRES 1 A 277 MET HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO SEQRES 2 A 277 ARG GLY SER GLY MET LYS GLU THR ALA ALA ALA LYS PHE SEQRES 3 A 277 GLU ARG GLN HIS MET ASP SER PRO ASP LEU GLY THR ASP SEQRES 4 A 277 ASP ASP ASP LYS ALA MET ALA ASP ILE GLY SER GLU PHE SEQRES 5 A 277 MET ALA SER LEU LEU PRO SER ASP ILE LEU ASP LEU THR SEQRES 6 A 277 ASN TRP LYS LEU THR LEU PRO ILE ASN ASP ALA GLU GLU SEQRES 7 A 277 ILE THR GLN PRO GLU LEU ASP SER TYR GLU HIS SER GLU SEQRES 8 A 277 TYR PHE HIS VAL ASN ASP ASP GLY ASP ALA VAL VAL PHE SEQRES 9 A 277 LYS ALA HIS CYS GLY GLY ASP THR THR GLU GLY SER SER SEQRES 10 A 277 TYR PRO ARG CYS GLU LEU ARG GLU MET THR ASN ASP GLY SEQRES 11 A 277 GLN ASP LYS ALA SER TRP SER THR THR SER GLY THR HIS SEQRES 12 A 277 THR MET ILE ILE ASP GLN LYS ILE THR HIS LEU PRO GLU SEQRES 13 A 277 VAL LYS ASP HIS VAL VAL VAL GLY GLN ILE HIS ASP SER SEQRES 14 A 277 ASP ASP ASP VAL ILE MET ILE ARG LEU GLU GLY ASN HIS SEQRES 15 A 277 LEU PHE VAL GLU GLY ASP GLY GLU GLU LEU ALA ASP LEU SEQRES 16 A 277 ASP THR ASP TYR GLU LEU GLY THR ARG PHE THR VAL LYS SEQRES 17 A 277 ILE VAL ALA SER GLY GLY LYS ILE LYS VAL TYR TYR ASN SEQRES 18 A 277 GLY ASP LEU LYS LEU THR TYR ASN LYS SER VAL SER GLY SEQRES 19 A 277 CYS TYR PHE LYS ALA GLY MET TYR THR GLN SER ASN THR SEQRES 20 A 277 SER LYS GLY ASP SER GLU ASP ALA TYR GLY GLU ASN GLU SEQRES 21 A 277 ILE TYR ASN LEU VAL VAL THR HIS SER LEU GLU HIS HIS SEQRES 22 A 277 HIS HIS HIS HIS HET SO4 A 301 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *573(H2 O) HELIX 1 AA1 LEU A 31 LEU A 36 1 6 HELIX 2 AA2 PRO A 56 TYR A 61 5 6 HELIX 3 AA3 ASN A 220 GLY A 224 5 5 SHEET 1 AA1 4 GLU A 52 ILE A 53 0 SHEET 2 AA1 4 TRP A 41 THR A 44 -1 N LEU A 43 O ILE A 53 SHEET 3 AA1 4 ARG A 94 THR A 101 -1 O ARG A 98 N LYS A 42 SHEET 4 AA1 4 ASP A 106 LYS A 107 -1 O ASP A 106 N THR A 101 SHEET 1 AA2 8 GLU A 52 ILE A 53 0 SHEET 2 AA2 8 TRP A 41 THR A 44 -1 N LEU A 43 O ILE A 53 SHEET 3 AA2 8 ARG A 94 THR A 101 -1 O ARG A 98 N LYS A 42 SHEET 4 AA2 8 TYR A 210 THR A 217 -1 O ALA A 213 N LEU A 97 SHEET 5 AA2 8 HIS A 134 HIS A 141 -1 N HIS A 141 O TYR A 210 SHEET 6 AA2 8 ASP A 146 GLU A 153 -1 O VAL A 147 N ILE A 140 SHEET 7 AA2 8 HIS A 156 GLY A 161 -1 O GLU A 160 N MET A 149 SHEET 8 AA2 8 GLU A 164 ASP A 170 -1 O LEU A 166 N VAL A 159 SHEET 1 AA3 7 PHE A 67 VAL A 69 0 SHEET 2 AA3 7 VAL A 76 HIS A 81 -1 O VAL A 77 N HIS A 68 SHEET 3 AA3 7 TYR A 230 SER A 243 -1 O ASN A 233 N PHE A 78 SHEET 4 AA3 7 THR A 116 HIS A 127 -1 N THR A 118 O THR A 241 SHEET 5 AA3 7 PHE A 179 SER A 186 -1 O ALA A 185 N HIS A 117 SHEET 6 AA3 7 LYS A 189 TYR A 194 -1 O LYS A 191 N VAL A 184 SHEET 7 AA3 7 ASP A 197 ASN A 203 -1 O LYS A 199 N VAL A 192 CISPEP 1 GLN A 55 PRO A 56 0 7.99 SITE 1 AC1 8 TYR A 92 LYS A 132 ARG A 151 HOH A 407 SITE 2 AC1 8 HOH A 430 HOH A 439 HOH A 499 HOH A 616 CRYST1 40.020 76.380 83.910 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024988 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013092 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011918 0.00000