HEADER ANTITUMOR PROTEIN 06-MAY-18 5ZU4 TITLE CRYSTAL STRUCTURE OF LAMPREY IMMUNE PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NATTERIN-LIKE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LETHENTERON CAMTSCHATICUM; SOURCE 3 ORGANISM_COMMON: JAPANESE LAMPREY; SOURCE 4 ORGANISM_TAXID: 980415; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LAMPREY, PORE-FORMING PROTEIN, CYTOTOXIN, ANTITUMOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Q.W.LI,Y.PANG REVDAT 2 22-NOV-23 5ZU4 1 REMARK REVDAT 1 12-JUN-19 5ZU4 0 JRNL AUTH Q.W.LI,Y.PANG JRNL TITL STRUCTURE OF A PORE-FORMING PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 89.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 35701 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1897 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.39 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2507 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 137 REMARK 3 BIN FREE R VALUE : 0.3360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4810 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 75 REMARK 3 SOLVENT ATOMS : 138 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.37000 REMARK 3 B22 (A**2) : 0.37000 REMARK 3 B33 (A**2) : -0.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.267 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.227 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.169 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.380 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4967 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4734 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6682 ; 1.658 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10942 ; 0.947 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 629 ; 7.676 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 195 ;35.873 ;24.718 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 871 ;16.158 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;22.485 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 763 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5521 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1083 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5ZU4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1300007570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9798 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41118 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 89.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 16.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4NZO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1,4-DIOXANE, POLYETHYLENE GLYCOL REMARK 280 20000, PH 9.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.04000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 52.52450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 52.52450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 126.06000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 52.52450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 52.52450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 42.02000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 52.52450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.52450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 126.06000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 52.52450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.52450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.02000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 84.04000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 99 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 99 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 105 150.84 -23.48 REMARK 500 ASP A 107 -154.52 -89.37 REMARK 500 TRP A 108 165.74 69.16 REMARK 500 LYS A 111 -105.06 -100.23 REMARK 500 LYS A 204 19.50 59.93 REMARK 500 ASP A 273 89.06 -158.31 REMARK 500 ALA B 17 132.96 -39.63 REMARK 500 MET B 105 132.67 -38.75 REMARK 500 ASP B 107 -71.68 -89.57 REMARK 500 LYS B 111 -114.83 -123.07 REMARK 500 LYS B 204 19.40 58.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 83 ALA A 84 145.12 REMARK 500 LYS A 104 MET A 105 149.93 REMARK 500 ASP A 107 TRP A 108 146.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 411 DBREF 5ZU4 A 1 313 UNP K7WEH5 K7WEH5_LETCA 1 313 DBREF 5ZU4 B 1 313 UNP K7WEH5 K7WEH5_LETCA 1 313 SEQADV 5ZU4 HIS A 0 UNP K7WEH5 EXPRESSION TAG SEQADV 5ZU4 VAL A 285 UNP K7WEH5 MET 285 CONFLICT SEQADV 5ZU4 HIS B 0 UNP K7WEH5 EXPRESSION TAG SEQADV 5ZU4 VAL B 285 UNP K7WEH5 MET 285 CONFLICT SEQRES 1 A 314 HIS MET VAL TYR PRO THR THR LEU HIS ILE ILE GLY GLY SEQRES 2 A 314 GLN GLY GLY ASN ALA PHE SER PHE ASN GLY GLN GLU ASN SEQRES 3 A 314 ALA ALA THR LEU GLN LYS LEU SER VAL SER VAL GLY GLY SEQRES 4 A 314 TRP GLN VAL ARG GLY VAL GLN VAL TRP LEU THR ASP GLY SEQRES 5 A 314 ARG ARG GLU THR PHE GLY ALA MET ASP SER SER ALA LYS SEQRES 6 A 314 GLU PHE GLU PHE GLU SER GLY GLU PHE ILE LYS SER LEU SEQRES 7 A 314 SER LEU TRP GLY ASN GLY ALA GLY THR ARG LEU GLY ALA SEQRES 8 A 314 ILE LYS PHE ILE THR SER ARG SER ARG GLU PHE PHE ALA SEQRES 9 A 314 LYS MET THR ASP TRP GLY LEU LYS THR GLU TYR LYS ILE SEQRES 10 A 314 ASP VAL GLY SER GLY ILE CYS LEU GLY VAL GLN GLY ARG SEQRES 11 A 314 GLY GLY SER ASP ILE ASP SER MET GLY PHE ILE PHE ILE SEQRES 12 A 314 ASN ALA ILE LYS SER SER VAL ILE GLN ASP MET LYS TYR SEQRES 13 A 314 PRO THR MET HIS GLN ILE LEU PRO ASN VAL GLN MET GLU SEQRES 14 A 314 GLU ILE LYS GLU MET GLU TYR LYS ASN ASP THR SER ILE SEQRES 15 A 314 VAL GLN SER TYR THR PHE GLU SER SER LYS LYS ILE ILE SEQRES 16 A 314 LYS LYS SER SER TRP SER THR THR ASN LYS ILE GLU SER SEQRES 17 A 314 THR PHE SER LEU SER VAL LYS ALA GLY ILE PRO GLU VAL SEQRES 18 A 314 MET GLU VAL GLU THR GLY PHE SER PHE THR VAL GLY SER SEQRES 19 A 314 GLU SER THR HIS ALA VAL GLU GLU SER GLU GLU LYS THR SEQRES 20 A 314 GLU THR LEU THR PHE PRO VAL THR VAL PRO THR HIS LYS SEQRES 21 A 314 THR VAL THR VAL VAL ALA ASN ILE GLY ARG ALA ASP ILE SEQRES 22 A 314 ASP LEU PRO TYR THR ALA LEU LEU ARG ILE THR CYS VAL SEQRES 23 A 314 ASN GLY ALA SER LEU ASP ALA PRO LEU SER GLY ILE TYR SEQRES 24 A 314 LYS GLY LEU THR TYR THR LYS MET THR ALA VAL ALA THR SEQRES 25 A 314 GLU SER SEQRES 1 B 314 HIS MET VAL TYR PRO THR THR LEU HIS ILE ILE GLY GLY SEQRES 2 B 314 GLN GLY GLY ASN ALA PHE SER PHE ASN GLY GLN GLU ASN SEQRES 3 B 314 ALA ALA THR LEU GLN LYS LEU SER VAL SER VAL GLY GLY SEQRES 4 B 314 TRP GLN VAL ARG GLY VAL GLN VAL TRP LEU THR ASP GLY SEQRES 5 B 314 ARG ARG GLU THR PHE GLY ALA MET ASP SER SER ALA LYS SEQRES 6 B 314 GLU PHE GLU PHE GLU SER GLY GLU PHE ILE LYS SER LEU SEQRES 7 B 314 SER LEU TRP GLY ASN GLY ALA GLY THR ARG LEU GLY ALA SEQRES 8 B 314 ILE LYS PHE ILE THR SER ARG SER ARG GLU PHE PHE ALA SEQRES 9 B 314 LYS MET THR ASP TRP GLY LEU LYS THR GLU TYR LYS ILE SEQRES 10 B 314 ASP VAL GLY SER GLY ILE CYS LEU GLY VAL GLN GLY ARG SEQRES 11 B 314 GLY GLY SER ASP ILE ASP SER MET GLY PHE ILE PHE ILE SEQRES 12 B 314 ASN ALA ILE LYS SER SER VAL ILE GLN ASP MET LYS TYR SEQRES 13 B 314 PRO THR MET HIS GLN ILE LEU PRO ASN VAL GLN MET GLU SEQRES 14 B 314 GLU ILE LYS GLU MET GLU TYR LYS ASN ASP THR SER ILE SEQRES 15 B 314 VAL GLN SER TYR THR PHE GLU SER SER LYS LYS ILE ILE SEQRES 16 B 314 LYS LYS SER SER TRP SER THR THR ASN LYS ILE GLU SER SEQRES 17 B 314 THR PHE SER LEU SER VAL LYS ALA GLY ILE PRO GLU VAL SEQRES 18 B 314 MET GLU VAL GLU THR GLY PHE SER PHE THR VAL GLY SER SEQRES 19 B 314 GLU SER THR HIS ALA VAL GLU GLU SER GLU GLU LYS THR SEQRES 20 B 314 GLU THR LEU THR PHE PRO VAL THR VAL PRO THR HIS LYS SEQRES 21 B 314 THR VAL THR VAL VAL ALA ASN ILE GLY ARG ALA ASP ILE SEQRES 22 B 314 ASP LEU PRO TYR THR ALA LEU LEU ARG ILE THR CYS VAL SEQRES 23 B 314 ASN GLY ALA SER LEU ASP ALA PRO LEU SER GLY ILE TYR SEQRES 24 B 314 LYS GLY LEU THR TYR THR LYS MET THR ALA VAL ALA THR SEQRES 25 B 314 GLU SER HET EDO A 401 4 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET CL A 407 1 HET GOL A 408 6 HET EDO B 401 4 HET EDO B 402 4 HET EDO B 403 4 HET EDO B 404 4 HET CL B 405 1 HET CL B 406 1 HET CL B 407 1 HET PEG B 408 7 HET GOL B 409 6 HET GOL B 410 6 HET GOL B 411 6 HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 EDO 10(C2 H6 O2) FORMUL 9 CL 4(CL 1-) FORMUL 10 GOL 4(C3 H8 O3) FORMUL 18 PEG C4 H10 O3 FORMUL 22 HOH *138(H2 O) HELIX 1 AA1 LYS A 204 PHE A 209 1 6 HELIX 2 AA2 GLN B 23 ALA B 26 5 4 HELIX 3 AA3 THR B 157 ILE B 161 5 5 HELIX 4 AA4 LYS B 204 PHE B 209 1 6 SHEET 1 AA1 3 THR A 5 LEU A 7 0 SHEET 2 AA1 3 ILE A 134 ILE A 142 -1 O PHE A 141 N THR A 6 SHEET 3 AA1 3 ILE A 10 GLY A 11 -1 N ILE A 10 O MET A 137 SHEET 1 AA2 4 THR A 5 LEU A 7 0 SHEET 2 AA2 4 ILE A 134 ILE A 142 -1 O PHE A 141 N THR A 6 SHEET 3 AA2 4 CYS A 123 GLY A 130 -1 N LEU A 124 O ILE A 140 SHEET 4 AA2 4 ASN A 16 ASN A 21 -1 N PHE A 20 O VAL A 126 SHEET 1 AA3 4 ARG A 53 GLY A 57 0 SHEET 2 AA3 4 VAL A 41 LEU A 48 -1 N VAL A 44 O PHE A 56 SHEET 3 AA3 4 LEU A 29 VAL A 36 -1 N GLN A 30 O TRP A 47 SHEET 4 AA3 4 LYS A 64 GLU A 67 -1 O LYS A 64 N VAL A 34 SHEET 1 AA4 4 GLU A 100 LYS A 104 0 SHEET 2 AA4 4 LEU A 88 THR A 95 -1 N ILE A 91 O ALA A 103 SHEET 3 AA4 4 ILE A 74 GLY A 81 -1 N SER A 78 O LYS A 92 SHEET 4 AA4 4 GLU A 113 ILE A 116 -1 O ILE A 116 N LEU A 77 SHEET 1 AA5 5 VAL A 165 ASN A 177 0 SHEET 2 AA5 5 LYS A 259 CYS A 284 -1 O ALA A 265 N ILE A 170 SHEET 3 AA5 5 SER A 289 TYR A 303 -1 O LEU A 294 N ALA A 278 SHEET 4 AA5 5 GLN A 183 TRP A 199 -1 N SER A 198 O LYS A 299 SHEET 5 AA5 5 GLU A 240 VAL A 255 -1 O VAL A 255 N GLN A 183 SHEET 1 AA6 5 SER A 235 HIS A 237 0 SHEET 2 AA6 5 SER A 212 ALA A 215 -1 N VAL A 213 O HIS A 237 SHEET 3 AA6 5 ILE A 145 LYS A 154 1 N ILE A 150 O SER A 212 SHEET 4 AA6 5 LYS A 259 CYS A 284 -1 O LEU A 279 N GLN A 151 SHEET 5 AA6 5 THR A 307 GLU A 312 -1 O THR A 311 N THR A 262 SHEET 1 AA7 2 PRO A 218 GLU A 222 0 SHEET 2 AA7 2 PHE A 227 VAL A 231 -1 O THR A 230 N GLU A 219 SHEET 1 AA8 3 THR B 5 THR B 6 0 SHEET 2 AA8 3 ILE B 134 ILE B 142 -1 O PHE B 141 N THR B 6 SHEET 3 AA8 3 ILE B 10 GLY B 11 -1 N ILE B 10 O MET B 137 SHEET 1 AA9 4 THR B 5 THR B 6 0 SHEET 2 AA9 4 ILE B 134 ILE B 142 -1 O PHE B 141 N THR B 6 SHEET 3 AA9 4 ILE B 122 GLY B 130 -1 N LEU B 124 O ILE B 140 SHEET 4 AA9 4 ASN B 16 ASN B 21 -1 N PHE B 18 O GLY B 128 SHEET 1 AB1 4 ARG B 53 GLY B 57 0 SHEET 2 AB1 4 VAL B 41 LEU B 48 -1 N VAL B 44 O PHE B 56 SHEET 3 AB1 4 LEU B 29 VAL B 36 -1 N LYS B 31 O TRP B 47 SHEET 4 AB1 4 LYS B 64 GLU B 67 -1 O LYS B 64 N VAL B 34 SHEET 1 AB2 4 GLU B 100 LYS B 104 0 SHEET 2 AB2 4 LEU B 88 THR B 95 -1 N ILE B 91 O ALA B 103 SHEET 3 AB2 4 ILE B 74 GLY B 81 -1 N TRP B 80 O GLY B 89 SHEET 4 AB2 4 GLU B 113 ILE B 116 -1 O ILE B 116 N LEU B 77 SHEET 1 AB3 5 VAL B 165 ASN B 177 0 SHEET 2 AB3 5 LYS B 259 CYS B 284 -1 O VAL B 261 N TYR B 175 SHEET 3 AB3 5 SER B 289 TYR B 303 -1 O TYR B 298 N LEU B 274 SHEET 4 AB3 5 GLN B 183 TRP B 199 -1 N LYS B 196 O LEU B 301 SHEET 5 AB3 5 GLU B 240 VAL B 255 -1 O VAL B 253 N TYR B 185 SHEET 1 AB4 5 SER B 235 HIS B 237 0 SHEET 2 AB4 5 SER B 212 ALA B 215 -1 N VAL B 213 O HIS B 237 SHEET 3 AB4 5 ILE B 145 LYS B 154 1 N ILE B 150 O SER B 212 SHEET 4 AB4 5 LYS B 259 CYS B 284 -1 O THR B 277 N LYS B 154 SHEET 5 AB4 5 THR B 307 SER B 313 -1 O THR B 311 N THR B 262 SHEET 1 AB5 2 PRO B 218 GLU B 222 0 SHEET 2 AB5 2 PHE B 227 VAL B 231 -1 O SER B 228 N MET B 221 SITE 1 AC1 5 THR A 28 LEU A 29 GLU A 72 GLY A 121 SITE 2 AC1 5 CYS A 123 SITE 1 AC2 7 PHE A 73 SER A 120 HOH A 529 SER B 190 SITE 2 AC2 7 LYS B 191 LYS B 192 HOH B 515 SITE 1 AC3 3 PRO A 252 THR A 254 HOH A 518 SITE 1 AC4 2 LYS A 31 GLU A 67 SITE 1 AC5 3 TYR A 276 SER A 295 GLY A 296 SITE 1 AC6 6 LYS A 196 SER A 197 ILE A 217 GLU A 241 SITE 2 AC6 6 GLU A 243 HOH A 521 SITE 1 AC7 4 GLN A 13 GLY A 14 GLY A 15 ASN B 16 SITE 1 AC8 7 GLY A 14 GLY A 15 ARG A 87 GLY A 131 SITE 2 AC8 7 SER A 132 ASP A 133 ASP A 135 SITE 1 AC9 6 THR B 28 LEU B 29 GLU B 72 GLY B 121 SITE 2 AC9 6 CYS B 123 PEG B 408 SITE 1 AD1 6 LYS B 176 ASN B 177 ASP B 178 HIS B 258 SITE 2 AD1 6 LYS B 259 THR B 260 SITE 1 AD2 4 ARG A 42 ALA A 58 SER A 132 ALA B 308 SITE 1 AD3 5 GLU B 168 LYS B 191 LYS B 192 TYR B 303 SITE 2 AD3 5 HOH B 524 SITE 1 AD4 4 GLU A 206 HOH A 582 LYS B 192 GLU B 244 SITE 1 AD5 3 HOH A 536 TYR B 175 THR B 186 SITE 1 AD6 7 THR B 6 LEU B 7 HIS B 8 ILE B 116 SITE 2 AD6 7 PHE B 139 HOH B 532 HOH B 533 SITE 1 AD7 12 SER A 190 LYS A 192 GLY B 71 GLU B 72 SITE 2 AD7 12 PHE B 73 SER B 120 ILE B 122 THR B 208 SITE 3 AD7 12 EDO B 401 HOH B 503 HOH B 538 HOH B 546 SITE 1 AD8 2 VAL B 253 THR B 254 SITE 1 AD9 4 GLY B 15 SER B 132 ASP B 133 ASP B 135 SITE 1 AE1 7 LYS B 195 LYS B 196 SER B 197 ILE B 217 SITE 2 AE1 7 GLU B 241 GLU B 243 HOH B 519 CRYST1 105.049 105.049 168.080 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009519 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009519 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005950 0.00000