HEADER RNA BINDING PROTEIN 07-MAY-18 5ZUH TITLE SOLUTION STRUCTURE OF RRM DOMIAN OF LA PROTEIN FROM TRYPANOSOMA BRUCEI COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA BINDING PROTEIN LA-LIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RRM; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI; SOURCE 3 ORGANISM_TAXID: 5691; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LA MOTIF, RRM DOMIAN, RNA-BINDING, TRYPANOSOMA BRUCEI, RNA BINDING KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR F.Z.SHAN REVDAT 2 04-SEP-19 5ZUH 1 JRNL REVDAT 1 15-MAY-19 5ZUH 0 SPRSDE 15-MAY-19 5ZUH 5ZOM JRNL AUTH F.SHAN,S.MEI,J.ZHANG,X.ZHANG,C.XU,S.LIAO,X.TU JRNL TITL A TELOMERASE SUBUNIT HOMOLOG LA PROTEIN FROM TRYPANOSOMA JRNL TITL 2 BRUCEI PLAYS AN ESSENTIAL ROLE IN RIBOSOMAL BIOGENESIS. JRNL REF FEBS J. V. 286 3129 2019 JRNL REFN ISSN 1742-464X JRNL PMID 30993866 JRNL DOI 10.1111/FEBS.14853 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZUH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1300007641. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 200 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-13C; U-15N] RRM, 200 REMARK 210 MM SODIUM CHLORIDE, 20 MM SODIUM REMARK 210 PHOSPHATE, 2 MM DTT, 2 MM EDTA, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, SPARKY REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 84 94.32 63.02 REMARK 500 2 PRO A 57 97.93 -69.76 REMARK 500 2 MET A 84 94.33 60.90 REMARK 500 3 ALA A 26 109.79 -58.22 REMARK 500 3 MET A 84 94.44 62.23 REMARK 500 4 LYS A 52 54.32 -143.14 REMARK 500 4 MET A 84 94.19 62.62 REMARK 500 5 MET A 84 94.46 63.28 REMARK 500 6 ALA A 26 106.97 -59.48 REMARK 500 6 LYS A 52 57.60 -140.98 REMARK 500 6 MET A 84 94.25 60.74 REMARK 500 7 MET A 84 94.11 60.42 REMARK 500 8 MET A 84 93.83 62.20 REMARK 500 9 ALA A 26 105.75 -58.07 REMARK 500 9 PRO A 57 95.57 -69.73 REMARK 500 9 MET A 84 94.23 63.26 REMARK 500 10 ALA A 26 109.55 -57.86 REMARK 500 10 MET A 84 94.46 62.32 REMARK 500 11 PRO A 57 96.14 -69.74 REMARK 500 11 MET A 84 94.41 63.00 REMARK 500 12 LYS A 52 53.89 -141.22 REMARK 500 12 MET A 84 94.13 62.95 REMARK 500 13 PRO A 57 95.97 -69.69 REMARK 500 13 MET A 84 94.17 62.15 REMARK 500 14 MET A 84 93.62 61.31 REMARK 500 15 MET A 84 94.39 60.10 REMARK 500 16 PRO A 57 99.50 -69.70 REMARK 500 16 MET A 84 94.26 62.99 REMARK 500 17 MET A 84 94.26 62.57 REMARK 500 18 MET A 84 94.46 62.32 REMARK 500 19 PRO A 57 98.37 -69.77 REMARK 500 19 MET A 84 94.31 62.55 REMARK 500 20 MET A 84 93.99 61.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36185 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF RRM DOMIAN OF LA PROTEIN FROM TRYPANOSOMA REMARK 900 BRUCEI DBREF 5ZUH A 12 110 UNP Q9NIH4 Q9NIH4_9TRYP 94 192 SEQRES 1 A 99 THR ASP HIS GLN THR VAL TYR VAL LYS PRO VAL PRO PRO SEQRES 2 A 99 THR ALA THR LEU GLU GLN LEU THR GLU PHE PHE SER LYS SEQRES 3 A 99 HIS GLY THR VAL GLN ALA VAL TRP ARG ARG TYR PHE ALA SEQRES 4 A 99 GLY LYS LYS ASP ALA PRO PRO GLU SER ARG THR LYS PRO SEQRES 5 A 99 SER VAL PHE VAL VAL PHE ASN SER SER GLU GLU ALA GLU SEQRES 6 A 99 ALA PHE GLN LYS ALA PRO PRO MET TYR ASP ASP VAL GLN SEQRES 7 A 99 LEU THR ALA GLU MET LYS THR THR TYR LEU GLU ARG LYS SEQRES 8 A 99 ALA GLU GLU ILE ALA ALA LYS LYS HELIX 1 AA1 THR A 27 HIS A 38 1 12 HELIX 2 AA2 SER A 71 ALA A 81 1 11 HELIX 3 AA3 MET A 94 LYS A 110 1 17 SHEET 1 AA1 4 ALA A 43 TRP A 45 0 SHEET 2 AA1 4 VAL A 65 VAL A 68 -1 O VAL A 68 N ALA A 43 SHEET 3 AA1 4 VAL A 17 VAL A 19 -1 N VAL A 19 O VAL A 65 SHEET 4 AA1 4 ALA A 92 GLU A 93 -1 O GLU A 93 N TYR A 18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1