data_5ZUP # _entry.id 5ZUP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5ZUP pdb_00005zup 10.2210/pdb5zup/pdb WWPDB D_1300007687 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-08-29 2 'Structure model' 1 1 2018-09-19 3 'Structure model' 1 2 2018-11-21 4 'Structure model' 1 3 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.page_last' 13 4 'Structure model' '_database_2.pdbx_DOI' 14 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5ZUP _pdbx_database_status.recvd_initial_deposition_date 2018-05-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5ZU1 unspecified PDB . 5ZUO unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kim, K.K.' 1 ? 'Kim, D.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 46 _citation.language ? _citation.page_first 10504 _citation.page_last 10513 _citation.title 'Sequence preference and structural heterogeneity of BZ junctions.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gky784 _citation.pdbx_database_id_PubMed 30184200 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kim, D.' 1 ? primary 'Hur, J.' 2 ? primary 'Han, J.H.' 3 ? primary 'Ha, S.C.' 4 ? primary 'Shin, D.' 5 ? primary 'Lee, S.' 6 ? primary 'Park, S.' 7 ? primary 'Sugiyama, H.' 8 ? primary 'Kim, K.K.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Double-stranded RNA-specific adenosine deaminase' 7372.584 4 3.5.4.37 ? ? ? 2 polymer syn "(5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*AP*AP*TP*AP*AP*AP*CP*C)-3')" 5181.376 1 ? ? ? ? 3 polymer syn "(5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*TP*CP*GP*CP*GP*CP*GP*CP*G)-3')" 5219.371 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DRADA,136 kDa double-stranded RNA-binding protein,p136,Interferon-inducible protein 4,IFI-4,K88DSRBP' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GSHMEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQ GSHMEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQ A,B,C,D ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DC)(DG)(DC)(DG)(DC)(DA)(DA)(DT)(DA)(DA)(DA)(DC)(DC)' GTCGCGCGCAATAAACC E ? 3 polydeoxyribonucleotide no no '(DA)(DC)(DG)(DG)(DT)(DT)(DT)(DA)(DT)(DC)(DG)(DC)(DG)(DC)(DG)(DC)(DG)' ACGGTTTATCGCGCGCG F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLU n 1 6 GLN n 1 7 ARG n 1 8 ILE n 1 9 LEU n 1 10 LYS n 1 11 PHE n 1 12 LEU n 1 13 GLU n 1 14 GLU n 1 15 LEU n 1 16 GLY n 1 17 GLU n 1 18 GLY n 1 19 LYS n 1 20 ALA n 1 21 THR n 1 22 THR n 1 23 ALA n 1 24 HIS n 1 25 ASP n 1 26 LEU n 1 27 SER n 1 28 GLY n 1 29 LYS n 1 30 LEU n 1 31 GLY n 1 32 THR n 1 33 PRO n 1 34 LYS n 1 35 LYS n 1 36 GLU n 1 37 ILE n 1 38 ASN n 1 39 ARG n 1 40 VAL n 1 41 LEU n 1 42 TYR n 1 43 SER n 1 44 LEU n 1 45 ALA n 1 46 LYS n 1 47 LYS n 1 48 GLY n 1 49 LYS n 1 50 LEU n 1 51 GLN n 1 52 LYS n 1 53 GLU n 1 54 ALA n 1 55 GLY n 1 56 THR n 1 57 PRO n 1 58 PRO n 1 59 LEU n 1 60 TRP n 1 61 LYS n 1 62 ILE n 1 63 ALA n 1 64 VAL n 1 65 SER n 1 66 THR n 1 67 GLN n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DG n 2 5 DC n 2 6 DG n 2 7 DC n 2 8 DG n 2 9 DC n 2 10 DA n 2 11 DA n 2 12 DT n 2 13 DA n 2 14 DA n 2 15 DA n 2 16 DC n 2 17 DC n 3 1 DA n 3 2 DC n 3 3 DG n 3 4 DG n 3 5 DT n 3 6 DT n 3 7 DT n 3 8 DA n 3 9 DT n 3 10 DC n 3 11 DG n 3 12 DC n 3 13 DG n 3 14 DC n 3 15 DG n 3 16 DC n 3 17 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 67 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ADAR, ADAR1, DSRAD, G1P1, IFI4' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 17 'synthetic construct' ? 32630 ? 3 1 sample 1 17 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 SER 2 -3 ? ? ? A . n A 1 3 HIS 3 -2 -2 HIS HIS A . n A 1 4 MET 4 -1 -1 MET MET A . n A 1 5 GLU 5 140 140 GLU GLU A . n A 1 6 GLN 6 141 141 GLN GLN A . n A 1 7 ARG 7 142 142 ARG ARG A . n A 1 8 ILE 8 143 143 ILE ILE A . n A 1 9 LEU 9 144 144 LEU LEU A . n A 1 10 LYS 10 145 145 LYS LYS A . n A 1 11 PHE 11 146 146 PHE PHE A . n A 1 12 LEU 12 147 ? ? ? A . n A 1 13 GLU 13 148 ? ? ? A . n A 1 14 GLU 14 149 ? ? ? A . n A 1 15 LEU 15 150 ? ? ? A . n A 1 16 GLY 16 151 ? ? ? A . n A 1 17 GLU 17 152 ? ? ? A . n A 1 18 GLY 18 153 ? ? ? A . n A 1 19 LYS 19 154 ? ? ? A . n A 1 20 ALA 20 155 ? ? ? A . n A 1 21 THR 21 156 156 THR THR A . n A 1 22 THR 22 157 157 THR THR A . n A 1 23 ALA 23 158 158 ALA ALA A . n A 1 24 HIS 24 159 159 HIS HIS A . n A 1 25 ASP 25 160 160 ASP ASP A . n A 1 26 LEU 26 161 161 LEU LEU A . n A 1 27 SER 27 162 162 SER SER A . n A 1 28 GLY 28 163 163 GLY GLY A . n A 1 29 LYS 29 164 164 LYS LYS A . n A 1 30 LEU 30 165 165 LEU LEU A . n A 1 31 GLY 31 166 166 GLY GLY A . n A 1 32 THR 32 167 167 THR THR A . n A 1 33 PRO 33 168 168 PRO PRO A . n A 1 34 LYS 34 169 169 LYS LYS A . n A 1 35 LYS 35 170 170 LYS LYS A . n A 1 36 GLU 36 171 171 GLU GLU A . n A 1 37 ILE 37 172 172 ILE ILE A . n A 1 38 ASN 38 173 173 ASN ASN A . n A 1 39 ARG 39 174 174 ARG ARG A . n A 1 40 VAL 40 175 175 VAL VAL A . n A 1 41 LEU 41 176 176 LEU LEU A . n A 1 42 TYR 42 177 177 TYR TYR A . n A 1 43 SER 43 178 178 SER SER A . n A 1 44 LEU 44 179 179 LEU LEU A . n A 1 45 ALA 45 180 180 ALA ALA A . n A 1 46 LYS 46 181 181 LYS LYS A . n A 1 47 LYS 47 182 182 LYS LYS A . n A 1 48 GLY 48 183 183 GLY GLY A . n A 1 49 LYS 49 184 184 LYS LYS A . n A 1 50 LEU 50 185 185 LEU LEU A . n A 1 51 GLN 51 186 186 GLN GLN A . n A 1 52 LYS 52 187 187 LYS LYS A . n A 1 53 GLU 53 188 188 GLU GLU A . n A 1 54 ALA 54 189 189 ALA ALA A . n A 1 55 GLY 55 190 190 GLY GLY A . n A 1 56 THR 56 191 191 THR THR A . n A 1 57 PRO 57 192 192 PRO PRO A . n A 1 58 PRO 58 193 193 PRO PRO A . n A 1 59 LEU 59 194 194 LEU LEU A . n A 1 60 TRP 60 195 195 TRP TRP A . n A 1 61 LYS 61 196 196 LYS LYS A . n A 1 62 ILE 62 197 197 ILE ILE A . n A 1 63 ALA 63 198 198 ALA ALA A . n A 1 64 VAL 64 199 199 VAL VAL A . n A 1 65 SER 65 200 ? ? ? A . n A 1 66 THR 66 201 ? ? ? A . n A 1 67 GLN 67 202 ? ? ? A . n B 1 1 GLY 1 -4 ? ? ? B . n B 1 2 SER 2 -3 ? ? ? B . n B 1 3 HIS 3 -2 -2 HIS HIS B . n B 1 4 MET 4 -1 -1 MET MET B . n B 1 5 GLU 5 140 140 GLU GLU B . n B 1 6 GLN 6 141 141 GLN GLN B . n B 1 7 ARG 7 142 142 ARG ARG B . n B 1 8 ILE 8 143 143 ILE ILE B . n B 1 9 LEU 9 144 144 LEU LEU B . n B 1 10 LYS 10 145 145 LYS LYS B . n B 1 11 PHE 11 146 146 PHE PHE B . n B 1 12 LEU 12 147 147 LEU LEU B . n B 1 13 GLU 13 148 148 GLU GLU B . n B 1 14 GLU 14 149 149 GLU GLU B . n B 1 15 LEU 15 150 150 LEU LEU B . n B 1 16 GLY 16 151 151 GLY GLY B . n B 1 17 GLU 17 152 152 GLU GLU B . n B 1 18 GLY 18 153 153 GLY GLY B . n B 1 19 LYS 19 154 154 LYS LYS B . n B 1 20 ALA 20 155 155 ALA ALA B . n B 1 21 THR 21 156 156 THR THR B . n B 1 22 THR 22 157 157 THR THR B . n B 1 23 ALA 23 158 158 ALA ALA B . n B 1 24 HIS 24 159 159 HIS HIS B . n B 1 25 ASP 25 160 160 ASP ASP B . n B 1 26 LEU 26 161 161 LEU LEU B . n B 1 27 SER 27 162 162 SER SER B . n B 1 28 GLY 28 163 163 GLY GLY B . n B 1 29 LYS 29 164 164 LYS LYS B . n B 1 30 LEU 30 165 165 LEU LEU B . n B 1 31 GLY 31 166 166 GLY GLY B . n B 1 32 THR 32 167 167 THR THR B . n B 1 33 PRO 33 168 168 PRO PRO B . n B 1 34 LYS 34 169 169 LYS LYS B . n B 1 35 LYS 35 170 170 LYS LYS B . n B 1 36 GLU 36 171 171 GLU GLU B . n B 1 37 ILE 37 172 172 ILE ILE B . n B 1 38 ASN 38 173 173 ASN ASN B . n B 1 39 ARG 39 174 174 ARG ARG B . n B 1 40 VAL 40 175 175 VAL VAL B . n B 1 41 LEU 41 176 176 LEU LEU B . n B 1 42 TYR 42 177 177 TYR TYR B . n B 1 43 SER 43 178 178 SER SER B . n B 1 44 LEU 44 179 179 LEU LEU B . n B 1 45 ALA 45 180 180 ALA ALA B . n B 1 46 LYS 46 181 181 LYS LYS B . n B 1 47 LYS 47 182 182 LYS LYS B . n B 1 48 GLY 48 183 183 GLY GLY B . n B 1 49 LYS 49 184 184 LYS LYS B . n B 1 50 LEU 50 185 185 LEU LEU B . n B 1 51 GLN 51 186 186 GLN GLN B . n B 1 52 LYS 52 187 187 LYS LYS B . n B 1 53 GLU 53 188 188 GLU GLU B . n B 1 54 ALA 54 189 189 ALA ALA B . n B 1 55 GLY 55 190 190 GLY GLY B . n B 1 56 THR 56 191 191 THR THR B . n B 1 57 PRO 57 192 192 PRO PRO B . n B 1 58 PRO 58 193 193 PRO PRO B . n B 1 59 LEU 59 194 194 LEU LEU B . n B 1 60 TRP 60 195 195 TRP TRP B . n B 1 61 LYS 61 196 196 LYS LYS B . n B 1 62 ILE 62 197 197 ILE ILE B . n B 1 63 ALA 63 198 198 ALA ALA B . n B 1 64 VAL 64 199 199 VAL VAL B . n B 1 65 SER 65 200 200 SER SER B . n B 1 66 THR 66 201 201 THR THR B . n B 1 67 GLN 67 202 202 GLN GLN B . n C 1 1 GLY 1 -4 ? ? ? C . n C 1 2 SER 2 -3 -3 SER SER C . n C 1 3 HIS 3 -2 -2 HIS HIS C . n C 1 4 MET 4 -1 -1 MET MET C . n C 1 5 GLU 5 140 140 GLU GLU C . n C 1 6 GLN 6 141 141 GLN GLN C . n C 1 7 ARG 7 142 142 ARG ARG C . n C 1 8 ILE 8 143 143 ILE ILE C . n C 1 9 LEU 9 144 144 LEU LEU C . n C 1 10 LYS 10 145 145 LYS LYS C . n C 1 11 PHE 11 146 146 PHE PHE C . n C 1 12 LEU 12 147 147 LEU LEU C . n C 1 13 GLU 13 148 148 GLU GLU C . n C 1 14 GLU 14 149 149 GLU GLU C . n C 1 15 LEU 15 150 150 LEU LEU C . n C 1 16 GLY 16 151 151 GLY GLY C . n C 1 17 GLU 17 152 152 GLU GLU C . n C 1 18 GLY 18 153 153 GLY GLY C . n C 1 19 LYS 19 154 154 LYS LYS C . n C 1 20 ALA 20 155 155 ALA ALA C . n C 1 21 THR 21 156 156 THR THR C . n C 1 22 THR 22 157 157 THR THR C . n C 1 23 ALA 23 158 158 ALA ALA C . n C 1 24 HIS 24 159 159 HIS HIS C . n C 1 25 ASP 25 160 160 ASP ASP C . n C 1 26 LEU 26 161 161 LEU LEU C . n C 1 27 SER 27 162 162 SER SER C . n C 1 28 GLY 28 163 163 GLY GLY C . n C 1 29 LYS 29 164 164 LYS LYS C . n C 1 30 LEU 30 165 165 LEU LEU C . n C 1 31 GLY 31 166 166 GLY GLY C . n C 1 32 THR 32 167 167 THR THR C . n C 1 33 PRO 33 168 168 PRO PRO C . n C 1 34 LYS 34 169 169 LYS LYS C . n C 1 35 LYS 35 170 170 LYS LYS C . n C 1 36 GLU 36 171 171 GLU GLU C . n C 1 37 ILE 37 172 172 ILE ILE C . n C 1 38 ASN 38 173 173 ASN ASN C . n C 1 39 ARG 39 174 174 ARG ARG C . n C 1 40 VAL 40 175 175 VAL VAL C . n C 1 41 LEU 41 176 176 LEU LEU C . n C 1 42 TYR 42 177 177 TYR TYR C . n C 1 43 SER 43 178 178 SER SER C . n C 1 44 LEU 44 179 179 LEU LEU C . n C 1 45 ALA 45 180 180 ALA ALA C . n C 1 46 LYS 46 181 181 LYS LYS C . n C 1 47 LYS 47 182 182 LYS LYS C . n C 1 48 GLY 48 183 183 GLY GLY C . n C 1 49 LYS 49 184 184 LYS LYS C . n C 1 50 LEU 50 185 185 LEU LEU C . n C 1 51 GLN 51 186 186 GLN GLN C . n C 1 52 LYS 52 187 187 LYS LYS C . n C 1 53 GLU 53 188 188 GLU GLU C . n C 1 54 ALA 54 189 189 ALA ALA C . n C 1 55 GLY 55 190 190 GLY GLY C . n C 1 56 THR 56 191 191 THR THR C . n C 1 57 PRO 57 192 192 PRO PRO C . n C 1 58 PRO 58 193 193 PRO PRO C . n C 1 59 LEU 59 194 194 LEU LEU C . n C 1 60 TRP 60 195 195 TRP TRP C . n C 1 61 LYS 61 196 196 LYS LYS C . n C 1 62 ILE 62 197 197 ILE ILE C . n C 1 63 ALA 63 198 198 ALA ALA C . n C 1 64 VAL 64 199 199 VAL VAL C . n C 1 65 SER 65 200 200 SER SER C . n C 1 66 THR 66 201 201 THR THR C . n C 1 67 GLN 67 202 202 GLN GLN C . n D 1 1 GLY 1 -4 ? ? ? D . n D 1 2 SER 2 -3 -3 SER SER D . n D 1 3 HIS 3 -2 -2 HIS HIS D . n D 1 4 MET 4 -1 -1 MET MET D . n D 1 5 GLU 5 140 140 GLU GLU D . n D 1 6 GLN 6 141 141 GLN GLN D . n D 1 7 ARG 7 142 142 ARG ARG D . n D 1 8 ILE 8 143 143 ILE ILE D . n D 1 9 LEU 9 144 144 LEU LEU D . n D 1 10 LYS 10 145 145 LYS LYS D . n D 1 11 PHE 11 146 146 PHE PHE D . n D 1 12 LEU 12 147 147 LEU LEU D . n D 1 13 GLU 13 148 148 GLU GLU D . n D 1 14 GLU 14 149 149 GLU GLU D . n D 1 15 LEU 15 150 150 LEU LEU D . n D 1 16 GLY 16 151 151 GLY GLY D . n D 1 17 GLU 17 152 152 GLU GLU D . n D 1 18 GLY 18 153 153 GLY GLY D . n D 1 19 LYS 19 154 154 LYS LYS D . n D 1 20 ALA 20 155 155 ALA ALA D . n D 1 21 THR 21 156 156 THR THR D . n D 1 22 THR 22 157 157 THR THR D . n D 1 23 ALA 23 158 158 ALA ALA D . n D 1 24 HIS 24 159 159 HIS HIS D . n D 1 25 ASP 25 160 160 ASP ASP D . n D 1 26 LEU 26 161 161 LEU LEU D . n D 1 27 SER 27 162 162 SER SER D . n D 1 28 GLY 28 163 163 GLY GLY D . n D 1 29 LYS 29 164 164 LYS LYS D . n D 1 30 LEU 30 165 165 LEU LEU D . n D 1 31 GLY 31 166 166 GLY GLY D . n D 1 32 THR 32 167 167 THR THR D . n D 1 33 PRO 33 168 168 PRO PRO D . n D 1 34 LYS 34 169 169 LYS LYS D . n D 1 35 LYS 35 170 170 LYS LYS D . n D 1 36 GLU 36 171 171 GLU GLU D . n D 1 37 ILE 37 172 172 ILE ILE D . n D 1 38 ASN 38 173 173 ASN ASN D . n D 1 39 ARG 39 174 174 ARG ARG D . n D 1 40 VAL 40 175 175 VAL VAL D . n D 1 41 LEU 41 176 176 LEU LEU D . n D 1 42 TYR 42 177 177 TYR TYR D . n D 1 43 SER 43 178 178 SER SER D . n D 1 44 LEU 44 179 179 LEU LEU D . n D 1 45 ALA 45 180 180 ALA ALA D . n D 1 46 LYS 46 181 181 LYS LYS D . n D 1 47 LYS 47 182 182 LYS LYS D . n D 1 48 GLY 48 183 183 GLY GLY D . n D 1 49 LYS 49 184 184 LYS LYS D . n D 1 50 LEU 50 185 185 LEU LEU D . n D 1 51 GLN 51 186 186 GLN GLN D . n D 1 52 LYS 52 187 187 LYS LYS D . n D 1 53 GLU 53 188 188 GLU GLU D . n D 1 54 ALA 54 189 189 ALA ALA D . n D 1 55 GLY 55 190 190 GLY GLY D . n D 1 56 THR 56 191 191 THR THR D . n D 1 57 PRO 57 192 192 PRO PRO D . n D 1 58 PRO 58 193 193 PRO PRO D . n D 1 59 LEU 59 194 194 LEU LEU D . n D 1 60 TRP 60 195 195 TRP TRP D . n D 1 61 LYS 61 196 196 LYS LYS D . n D 1 62 ILE 62 197 197 ILE ILE D . n D 1 63 ALA 63 198 198 ALA ALA D . n D 1 64 VAL 64 199 199 VAL VAL D . n D 1 65 SER 65 200 ? ? ? D . n D 1 66 THR 66 201 ? ? ? D . n D 1 67 GLN 67 202 ? ? ? D . n E 2 1 DG 1 1 1 DG DG E . n E 2 2 DT 2 2 2 DT DT E . n E 2 3 DC 3 3 3 DC DC E . n E 2 4 DG 4 4 4 DG DG E . n E 2 5 DC 5 5 5 DC DC E . n E 2 6 DG 6 6 6 DG DG E . n E 2 7 DC 7 7 7 DC DC E . n E 2 8 DG 8 8 8 DG DG E . n E 2 9 DC 9 9 9 DC DC E . n E 2 10 DA 10 10 10 DA DA E . n E 2 11 DA 11 11 11 DA DA E . n E 2 12 DT 12 12 12 DT DT E . n E 2 13 DA 13 13 13 DA DA E . n E 2 14 DA 14 14 14 DA DA E . n E 2 15 DA 15 15 15 DA DA E . n E 2 16 DC 16 16 16 DC DC E . n E 2 17 DC 17 17 17 DC DC E . n F 3 1 DA 1 18 18 DA DA F . n F 3 2 DC 2 19 19 DC DC F . n F 3 3 DG 3 20 20 DG DG F . n F 3 4 DG 4 21 21 DG DG F . n F 3 5 DT 5 22 22 DT DT F . n F 3 6 DT 6 23 23 DT DT F . n F 3 7 DT 7 24 24 DT DT F . n F 3 8 DA 8 25 25 DA DA F . n F 3 9 DT 9 26 26 DT DT F . n F 3 10 DC 10 27 27 DC DC F . n F 3 11 DG 11 28 28 DG DG F . n F 3 12 DC 12 29 29 DC DC F . n F 3 13 DG 13 30 30 DG DG F . n F 3 14 DC 14 31 31 DC DC F . n F 3 15 DG 15 32 32 DG DG F . n F 3 16 DC 16 33 33 DC DC F . n F 3 17 DG 17 34 34 DG DG F . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS -2 ? CG ? A HIS 3 CG 2 1 Y 1 A HIS -2 ? ND1 ? A HIS 3 ND1 3 1 Y 1 A HIS -2 ? CD2 ? A HIS 3 CD2 4 1 Y 1 A HIS -2 ? CE1 ? A HIS 3 CE1 5 1 Y 1 A HIS -2 ? NE2 ? A HIS 3 NE2 6 1 Y 1 A GLU 140 ? CG ? A GLU 5 CG 7 1 Y 1 A GLU 140 ? CD ? A GLU 5 CD 8 1 Y 1 A GLU 140 ? OE1 ? A GLU 5 OE1 9 1 Y 1 A GLU 140 ? OE2 ? A GLU 5 OE2 10 1 Y 1 A GLN 141 ? CG ? A GLN 6 CG 11 1 Y 1 A GLN 141 ? CD ? A GLN 6 CD 12 1 Y 1 A GLN 141 ? OE1 ? A GLN 6 OE1 13 1 Y 1 A GLN 141 ? NE2 ? A GLN 6 NE2 14 1 Y 1 A ARG 142 ? CG ? A ARG 7 CG 15 1 Y 1 A ARG 142 ? CD ? A ARG 7 CD 16 1 Y 1 A ARG 142 ? NE ? A ARG 7 NE 17 1 Y 1 A ARG 142 ? CZ ? A ARG 7 CZ 18 1 Y 1 A ARG 142 ? NH1 ? A ARG 7 NH1 19 1 Y 1 A ARG 142 ? NH2 ? A ARG 7 NH2 20 1 Y 1 A ILE 143 ? CG1 ? A ILE 8 CG1 21 1 Y 1 A ILE 143 ? CG2 ? A ILE 8 CG2 22 1 Y 1 A ILE 143 ? CD1 ? A ILE 8 CD1 23 1 Y 1 A LEU 144 ? CG ? A LEU 9 CG 24 1 Y 1 A LEU 144 ? CD1 ? A LEU 9 CD1 25 1 Y 1 A LEU 144 ? CD2 ? A LEU 9 CD2 26 1 Y 1 A LYS 145 ? CG ? A LYS 10 CG 27 1 Y 1 A LYS 145 ? CD ? A LYS 10 CD 28 1 Y 1 A LYS 145 ? CE ? A LYS 10 CE 29 1 Y 1 A LYS 145 ? NZ ? A LYS 10 NZ 30 1 Y 1 A PHE 146 ? CG ? A PHE 11 CG 31 1 Y 1 A PHE 146 ? CD1 ? A PHE 11 CD1 32 1 Y 1 A PHE 146 ? CD2 ? A PHE 11 CD2 33 1 Y 1 A PHE 146 ? CE1 ? A PHE 11 CE1 34 1 Y 1 A PHE 146 ? CE2 ? A PHE 11 CE2 35 1 Y 1 A PHE 146 ? CZ ? A PHE 11 CZ 36 1 Y 1 B HIS -2 ? CG ? B HIS 3 CG 37 1 Y 1 B HIS -2 ? ND1 ? B HIS 3 ND1 38 1 Y 1 B HIS -2 ? CD2 ? B HIS 3 CD2 39 1 Y 1 B HIS -2 ? CE1 ? B HIS 3 CE1 40 1 Y 1 B HIS -2 ? NE2 ? B HIS 3 NE2 41 1 Y 1 D HIS -2 ? CG ? D HIS 3 CG 42 1 Y 1 D HIS -2 ? ND1 ? D HIS 3 ND1 43 1 Y 1 D HIS -2 ? CD2 ? D HIS 3 CD2 44 1 Y 1 D HIS -2 ? CE1 ? D HIS 3 CE1 45 1 Y 1 D HIS -2 ? NE2 ? D HIS 3 NE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10.1_2155 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 5ZUP _cell.details ? _cell.formula_units_Z ? _cell.length_a 112.605 _cell.length_a_esd ? _cell.length_b 112.605 _cell.length_b_esd ? _cell.length_c 61.833 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZUP _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5ZUP _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.84 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 56.64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'BATCH MODE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '25% ethylene glycol, with microseeding of small crystal' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2009-11-04 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PAL/PLS BEAMLINE 7A (6B, 6C1)' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline '7A (6B, 6C1)' _diffrn_source.pdbx_synchrotron_site PAL/PLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5ZUP _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.90 _reflns.d_resolution_low 50.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10053 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 50.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 2.95 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 161.400 _refine.B_iso_mean 87.3829 _refine.B_iso_min 35.530 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5ZUP _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.9000 _refine.ls_d_res_low 26.1100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10006 _refine.ls_number_reflns_R_free 1000 _refine.ls_number_reflns_R_work 9006 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.6000 _refine.ls_percent_reflns_R_free 9.9900 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2603 _refine.ls_R_factor_R_free 0.2820 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2578 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 33.9800 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4500 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.9000 _refine_hist.d_res_low 26.1100 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2578 _refine_hist.pdbx_number_residues_total 281 _refine_hist.pdbx_number_atoms_protein 1888 _refine_hist.pdbx_number_atoms_nucleic_acid 690 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 ? 2688 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.487 ? 3754 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.030 ? 429 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 350 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 18.975 ? 1526 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.8999 3.0525 1428 . 143 1285 100.0000 . . . 0.3645 0.0000 0.3279 . . . . . . 7 . . . 'X-RAY DIFFRACTION' 3.0525 3.2434 1412 . 144 1268 100.0000 . . . 0.3889 0.0000 0.3351 . . . . . . 7 . . . 'X-RAY DIFFRACTION' 3.2434 3.4933 1419 . 141 1278 100.0000 . . . 0.3329 0.0000 0.2974 . . . . . . 7 . . . 'X-RAY DIFFRACTION' 3.4933 3.8439 1418 . 137 1281 100.0000 . . . 0.2930 0.0000 0.2737 . . . . . . 7 . . . 'X-RAY DIFFRACTION' 3.8439 4.3978 1431 . 146 1285 100.0000 . . . 0.2816 0.0000 0.2607 . . . . . . 7 . . . 'X-RAY DIFFRACTION' 4.3978 5.5321 1445 . 142 1303 100.0000 . . . 0.2710 0.0000 0.2390 . . . . . . 7 . . . 'X-RAY DIFFRACTION' 5.5321 26.1113 1453 . 147 1306 99.0000 . . . 0.2438 0.0000 0.2255 . . . . . . 7 . . . # _struct.entry_id 5ZUP _struct.title 'Crystal Structure of BZ junction in diverse sequence' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5ZUP _struct_keywords.text 'Z-DNA, B-Z junction, protein-DNA complex, HYDROLASE-DNA complex' _struct_keywords.pdbx_keywords HYDROLASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP DSRAD_HUMAN P55265 ? 1 EQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQ 140 2 PDB 5ZUP 5ZUP ? 2 ? 1 3 PDB 5ZUP 5ZUP ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5ZUP A 5 ? 67 ? P55265 140 ? 202 ? 140 202 2 1 5ZUP B 5 ? 67 ? P55265 140 ? 202 ? 140 202 3 1 5ZUP C 5 ? 67 ? P55265 140 ? 202 ? 140 202 4 1 5ZUP D 5 ? 67 ? P55265 140 ? 202 ? 140 202 5 2 5ZUP E 1 ? 17 ? 5ZUP 1 ? 17 ? 1 17 6 3 5ZUP F 1 ? 17 ? 5ZUP 18 ? 34 ? 18 34 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5ZUP GLY A 1 ? UNP P55265 ? ? 'expression tag' -4 1 1 5ZUP SER A 2 ? UNP P55265 ? ? 'expression tag' -3 2 1 5ZUP HIS A 3 ? UNP P55265 ? ? 'expression tag' -2 3 1 5ZUP MET A 4 ? UNP P55265 ? ? 'expression tag' -1 4 2 5ZUP GLY B 1 ? UNP P55265 ? ? 'expression tag' -4 5 2 5ZUP SER B 2 ? UNP P55265 ? ? 'expression tag' -3 6 2 5ZUP HIS B 3 ? UNP P55265 ? ? 'expression tag' -2 7 2 5ZUP MET B 4 ? UNP P55265 ? ? 'expression tag' -1 8 3 5ZUP GLY C 1 ? UNP P55265 ? ? 'expression tag' -4 9 3 5ZUP SER C 2 ? UNP P55265 ? ? 'expression tag' -3 10 3 5ZUP HIS C 3 ? UNP P55265 ? ? 'expression tag' -2 11 3 5ZUP MET C 4 ? UNP P55265 ? ? 'expression tag' -1 12 4 5ZUP GLY D 1 ? UNP P55265 ? ? 'expression tag' -4 13 4 5ZUP SER D 2 ? UNP P55265 ? ? 'expression tag' -3 14 4 5ZUP HIS D 3 ? UNP P55265 ? ? 'expression tag' -2 15 4 5ZUP MET D 4 ? UNP P55265 ? ? 'expression tag' -1 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5660 ? 1 MORE -51 ? 1 'SSA (A^2)' 19920 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 3 ? PHE A 11 ? HIS A -2 PHE A 146 1 ? 9 HELX_P HELX_P2 AA2 THR A 22 ? LEU A 30 ? THR A 157 LEU A 165 1 ? 9 HELX_P HELX_P3 AA3 PRO A 33 ? LYS A 47 ? PRO A 168 LYS A 182 1 ? 15 HELX_P HELX_P4 AA4 MET B 4 ? GLU B 14 ? MET B -1 GLU B 149 1 ? 11 HELX_P HELX_P5 AA5 THR B 22 ? LEU B 30 ? THR B 157 LEU B 165 1 ? 9 HELX_P HELX_P6 AA6 PRO B 33 ? LYS B 47 ? PRO B 168 LYS B 182 1 ? 15 HELX_P HELX_P7 AA7 HIS C 3 ? GLY C 16 ? HIS C -2 GLY C 151 1 ? 14 HELX_P HELX_P8 AA8 ALA C 23 ? LEU C 30 ? ALA C 158 LEU C 165 1 ? 8 HELX_P HELX_P9 AA9 PRO C 33 ? LYS C 47 ? PRO C 168 LYS C 182 1 ? 15 HELX_P HELX_P10 AB1 HIS D 3 ? LEU D 15 ? HIS D -2 LEU D 150 1 ? 13 HELX_P HELX_P11 AB2 THR D 22 ? LYS D 29 ? THR D 157 LYS D 164 1 ? 8 HELX_P HELX_P12 AB3 PRO D 33 ? LYS D 47 ? PRO D 168 LYS D 182 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? E DC 3 N3 ? ? ? 1_555 F DG 17 N1 ? ? E DC 3 F DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? E DC 3 N4 ? ? ? 1_555 F DG 17 O6 ? ? E DC 3 F DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? E DC 3 O2 ? ? ? 1_555 F DG 17 N2 ? ? E DC 3 F DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? E DG 4 N1 ? ? ? 1_555 F DC 16 N3 ? ? E DG 4 F DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? E DG 4 N2 ? ? ? 1_555 F DC 16 O2 ? ? E DG 4 F DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? E DG 4 O6 ? ? ? 1_555 F DC 16 N4 ? ? E DG 4 F DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? E DC 5 N3 ? ? ? 1_555 F DG 15 N1 ? ? E DC 5 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? E DC 5 N4 ? ? ? 1_555 F DG 15 O6 ? ? E DC 5 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? E DC 5 O2 ? ? ? 1_555 F DG 15 N2 ? ? E DC 5 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? E DG 6 N1 ? ? ? 1_555 F DC 14 N3 ? ? E DG 6 F DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? E DG 6 N2 ? ? ? 1_555 F DC 14 O2 ? ? E DG 6 F DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? E DG 6 O6 ? ? ? 1_555 F DC 14 N4 ? ? E DG 6 F DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? E DC 7 N3 ? ? ? 1_555 F DG 13 N1 ? ? E DC 7 F DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? E DC 7 N4 ? ? ? 1_555 F DG 13 O6 ? ? E DC 7 F DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? E DC 7 O2 ? ? ? 1_555 F DG 13 N2 ? ? E DC 7 F DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? E DG 8 N1 ? ? ? 1_555 F DC 12 N3 ? ? E DG 8 F DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? E DG 8 N2 ? ? ? 1_555 F DC 12 O2 ? ? E DG 8 F DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? E DG 8 O6 ? ? ? 1_555 F DC 12 N4 ? ? E DG 8 F DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? E DC 9 N3 ? ? ? 1_555 F DG 11 N1 ? ? E DC 9 F DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? E DC 9 N4 ? ? ? 1_555 F DG 11 O6 ? ? E DC 9 F DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? E DC 9 O2 ? ? ? 1_555 F DG 11 N2 ? ? E DC 9 F DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? E DA 10 N6 ? ? ? 1_555 F DC 10 N3 ? ? E DA 10 F DC 27 1_555 ? ? ? ? ? ? 'DA-DC MISPAIR' ? ? ? hydrog23 hydrog ? ? E DT 12 N3 ? ? ? 1_555 F DA 8 N1 ? ? E DT 12 F DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? E DT 12 O4 ? ? ? 1_555 F DA 8 N6 ? ? E DT 12 F DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? E DA 13 N1 ? ? ? 1_555 F DT 7 N3 ? ? E DA 13 F DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? E DA 13 N6 ? ? ? 1_555 F DT 7 O4 ? ? E DA 13 F DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? E DA 14 N1 ? ? ? 1_555 F DT 6 N3 ? ? E DA 14 F DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? E DA 14 N6 ? ? ? 1_555 F DT 6 O4 ? ? E DA 14 F DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? E DA 15 N1 ? ? ? 1_555 F DT 5 N3 ? ? E DA 15 F DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? E DA 15 N6 ? ? ? 1_555 F DT 5 O4 ? ? E DA 15 F DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? E DC 16 N3 ? ? ? 1_555 F DG 4 N1 ? ? E DC 16 F DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? E DC 16 N4 ? ? ? 1_555 F DG 4 O6 ? ? E DC 16 F DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? E DC 16 O2 ? ? ? 1_555 F DG 4 N2 ? ? E DC 16 F DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? E DC 17 N3 ? ? ? 1_555 F DG 3 N1 ? ? E DC 17 F DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E DC 17 N4 ? ? ? 1_555 F DG 3 O6 ? ? E DC 17 F DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E DC 17 O2 ? ? ? 1_555 F DG 3 N2 ? ? E DC 17 F DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 56 A . ? THR 191 A PRO 57 A ? PRO 192 A 1 0.00 2 THR 56 B . ? THR 191 B PRO 57 B ? PRO 192 B 1 -3.72 3 THR 56 C . ? THR 191 C PRO 57 C ? PRO 192 C 1 0.14 4 THR 56 D . ? THR 191 D PRO 57 D ? PRO 192 D 1 -2.35 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 3 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 50 ? GLU A 53 ? LEU A 185 GLU A 188 AA1 2 LEU A 59 ? ILE A 62 ? LEU A 194 ILE A 197 AA2 1 LEU B 50 ? GLU B 53 ? LEU B 185 GLU B 188 AA2 2 LEU B 59 ? ILE B 62 ? LEU B 194 ILE B 197 AA3 1 THR C 21 ? THR C 22 ? THR C 156 THR C 157 AA3 2 LEU C 59 ? ILE C 62 ? LEU C 194 ILE C 197 AA3 3 LEU C 50 ? GLU C 53 ? LEU C 185 GLU C 188 AA4 1 LEU D 50 ? GLU D 53 ? LEU D 185 GLU D 188 AA4 2 LEU D 59 ? ILE D 62 ? LEU D 194 ILE D 197 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 53 ? N GLU A 188 O LEU A 59 ? O LEU A 194 AA2 1 2 N GLU B 53 ? N GLU B 188 O LEU B 59 ? O LEU B 194 AA3 1 2 N THR C 21 ? N THR C 156 O TRP C 60 ? O TRP C 195 AA3 2 3 O LYS C 61 ? O LYS C 196 N GLN C 51 ? N GLN C 186 AA4 1 2 N GLU D 53 ? N GLU D 188 O LEU D 59 ? O LEU D 194 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLU _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 149 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -83.50 _pdbx_validate_torsion.psi 45.93 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 20.6399 _pdbx_refine_tls.origin_y -35.1040 _pdbx_refine_tls.origin_z -0.8889 _pdbx_refine_tls.T[1][1] 0.4451 _pdbx_refine_tls.T[2][2] 0.4311 _pdbx_refine_tls.T[3][3] 0.4866 _pdbx_refine_tls.T[1][2] 0.0665 _pdbx_refine_tls.T[1][3] 0.0061 _pdbx_refine_tls.T[2][3] -0.0243 _pdbx_refine_tls.L[1][1] 1.6352 _pdbx_refine_tls.L[2][2] 1.5844 _pdbx_refine_tls.L[3][3] 0.4942 _pdbx_refine_tls.L[1][2] -0.1842 _pdbx_refine_tls.L[1][3] -0.5509 _pdbx_refine_tls.L[2][3] 0.1205 _pdbx_refine_tls.S[1][1] -0.0189 _pdbx_refine_tls.S[2][2] 0.1017 _pdbx_refine_tls.S[3][3] 0.0003 _pdbx_refine_tls.S[1][2] 0.0589 _pdbx_refine_tls.S[1][3] -0.0244 _pdbx_refine_tls.S[2][3] -0.2812 _pdbx_refine_tls.S[2][1] -0.1027 _pdbx_refine_tls.S[3][1] 0.0622 _pdbx_refine_tls.S[3][2] -0.0933 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A -2 A 199 all ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 B -2 B 202 all ? ? ? ? ? 'X-RAY DIFFRACTION' 3 1 C -3 C 202 all ? ? ? ? ? 'X-RAY DIFFRACTION' 4 1 D -3 D 199 all ? ? ? ? ? 'X-RAY DIFFRACTION' 5 1 E 1 E 17 all ? ? ? ? ? 'X-RAY DIFFRACTION' 6 1 F 18 F 34 all ? ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A SER -3 ? A SER 2 3 1 Y 1 A LEU 147 ? A LEU 12 4 1 Y 1 A GLU 148 ? A GLU 13 5 1 Y 1 A GLU 149 ? A GLU 14 6 1 Y 1 A LEU 150 ? A LEU 15 7 1 Y 1 A GLY 151 ? A GLY 16 8 1 Y 1 A GLU 152 ? A GLU 17 9 1 Y 1 A GLY 153 ? A GLY 18 10 1 Y 1 A LYS 154 ? A LYS 19 11 1 Y 1 A ALA 155 ? A ALA 20 12 1 Y 1 A SER 200 ? A SER 65 13 1 Y 1 A THR 201 ? A THR 66 14 1 Y 1 A GLN 202 ? A GLN 67 15 1 Y 1 B GLY -4 ? B GLY 1 16 1 Y 1 B SER -3 ? B SER 2 17 1 Y 1 C GLY -4 ? C GLY 1 18 1 Y 1 D GLY -4 ? D GLY 1 19 1 Y 1 D SER 200 ? D SER 65 20 1 Y 1 D THR 201 ? D THR 66 21 1 Y 1 D GLN 202 ? D GLN 67 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 ILE N N N N 287 ILE CA C N S 288 ILE C C N N 289 ILE O O N N 290 ILE CB C N S 291 ILE CG1 C N N 292 ILE CG2 C N N 293 ILE CD1 C N N 294 ILE OXT O N N 295 ILE H H N N 296 ILE H2 H N N 297 ILE HA H N N 298 ILE HB H N N 299 ILE HG12 H N N 300 ILE HG13 H N N 301 ILE HG21 H N N 302 ILE HG22 H N N 303 ILE HG23 H N N 304 ILE HD11 H N N 305 ILE HD12 H N N 306 ILE HD13 H N N 307 ILE HXT H N N 308 LEU N N N N 309 LEU CA C N S 310 LEU C C N N 311 LEU O O N N 312 LEU CB C N N 313 LEU CG C N N 314 LEU CD1 C N N 315 LEU CD2 C N N 316 LEU OXT O N N 317 LEU H H N N 318 LEU H2 H N N 319 LEU HA H N N 320 LEU HB2 H N N 321 LEU HB3 H N N 322 LEU HG H N N 323 LEU HD11 H N N 324 LEU HD12 H N N 325 LEU HD13 H N N 326 LEU HD21 H N N 327 LEU HD22 H N N 328 LEU HD23 H N N 329 LEU HXT H N N 330 LYS N N N N 331 LYS CA C N S 332 LYS C C N N 333 LYS O O N N 334 LYS CB C N N 335 LYS CG C N N 336 LYS CD C N N 337 LYS CE C N N 338 LYS NZ N N N 339 LYS OXT O N N 340 LYS H H N N 341 LYS H2 H N N 342 LYS HA H N N 343 LYS HB2 H N N 344 LYS HB3 H N N 345 LYS HG2 H N N 346 LYS HG3 H N N 347 LYS HD2 H N N 348 LYS HD3 H N N 349 LYS HE2 H N N 350 LYS HE3 H N N 351 LYS HZ1 H N N 352 LYS HZ2 H N N 353 LYS HZ3 H N N 354 LYS HXT H N N 355 MET N N N N 356 MET CA C N S 357 MET C C N N 358 MET O O N N 359 MET CB C N N 360 MET CG C N N 361 MET SD S N N 362 MET CE C N N 363 MET OXT O N N 364 MET H H N N 365 MET H2 H N N 366 MET HA H N N 367 MET HB2 H N N 368 MET HB3 H N N 369 MET HG2 H N N 370 MET HG3 H N N 371 MET HE1 H N N 372 MET HE2 H N N 373 MET HE3 H N N 374 MET HXT H N N 375 PHE N N N N 376 PHE CA C N S 377 PHE C C N N 378 PHE O O N N 379 PHE CB C N N 380 PHE CG C Y N 381 PHE CD1 C Y N 382 PHE CD2 C Y N 383 PHE CE1 C Y N 384 PHE CE2 C Y N 385 PHE CZ C Y N 386 PHE OXT O N N 387 PHE H H N N 388 PHE H2 H N N 389 PHE HA H N N 390 PHE HB2 H N N 391 PHE HB3 H N N 392 PHE HD1 H N N 393 PHE HD2 H N N 394 PHE HE1 H N N 395 PHE HE2 H N N 396 PHE HZ H N N 397 PHE HXT H N N 398 PRO N N N N 399 PRO CA C N S 400 PRO C C N N 401 PRO O O N N 402 PRO CB C N N 403 PRO CG C N N 404 PRO CD C N N 405 PRO OXT O N N 406 PRO H H N N 407 PRO HA H N N 408 PRO HB2 H N N 409 PRO HB3 H N N 410 PRO HG2 H N N 411 PRO HG3 H N N 412 PRO HD2 H N N 413 PRO HD3 H N N 414 PRO HXT H N N 415 SER N N N N 416 SER CA C N S 417 SER C C N N 418 SER O O N N 419 SER CB C N N 420 SER OG O N N 421 SER OXT O N N 422 SER H H N N 423 SER H2 H N N 424 SER HA H N N 425 SER HB2 H N N 426 SER HB3 H N N 427 SER HG H N N 428 SER HXT H N N 429 THR N N N N 430 THR CA C N S 431 THR C C N N 432 THR O O N N 433 THR CB C N R 434 THR OG1 O N N 435 THR CG2 C N N 436 THR OXT O N N 437 THR H H N N 438 THR H2 H N N 439 THR HA H N N 440 THR HB H N N 441 THR HG1 H N N 442 THR HG21 H N N 443 THR HG22 H N N 444 THR HG23 H N N 445 THR HXT H N N 446 TRP N N N N 447 TRP CA C N S 448 TRP C C N N 449 TRP O O N N 450 TRP CB C N N 451 TRP CG C Y N 452 TRP CD1 C Y N 453 TRP CD2 C Y N 454 TRP NE1 N Y N 455 TRP CE2 C Y N 456 TRP CE3 C Y N 457 TRP CZ2 C Y N 458 TRP CZ3 C Y N 459 TRP CH2 C Y N 460 TRP OXT O N N 461 TRP H H N N 462 TRP H2 H N N 463 TRP HA H N N 464 TRP HB2 H N N 465 TRP HB3 H N N 466 TRP HD1 H N N 467 TRP HE1 H N N 468 TRP HE3 H N N 469 TRP HZ2 H N N 470 TRP HZ3 H N N 471 TRP HH2 H N N 472 TRP HXT H N N 473 TYR N N N N 474 TYR CA C N S 475 TYR C C N N 476 TYR O O N N 477 TYR CB C N N 478 TYR CG C Y N 479 TYR CD1 C Y N 480 TYR CD2 C Y N 481 TYR CE1 C Y N 482 TYR CE2 C Y N 483 TYR CZ C Y N 484 TYR OH O N N 485 TYR OXT O N N 486 TYR H H N N 487 TYR H2 H N N 488 TYR HA H N N 489 TYR HB2 H N N 490 TYR HB3 H N N 491 TYR HD1 H N N 492 TYR HD2 H N N 493 TYR HE1 H N N 494 TYR HE2 H N N 495 TYR HH H N N 496 TYR HXT H N N 497 VAL N N N N 498 VAL CA C N S 499 VAL C C N N 500 VAL O O N N 501 VAL CB C N N 502 VAL CG1 C N N 503 VAL CG2 C N N 504 VAL OXT O N N 505 VAL H H N N 506 VAL H2 H N N 507 VAL HA H N N 508 VAL HB H N N 509 VAL HG11 H N N 510 VAL HG12 H N N 511 VAL HG13 H N N 512 VAL HG21 H N N 513 VAL HG22 H N N 514 VAL HG23 H N N 515 VAL HXT H N N 516 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 ILE N CA sing N N 286 ILE N H sing N N 287 ILE N H2 sing N N 288 ILE CA C sing N N 289 ILE CA CB sing N N 290 ILE CA HA sing N N 291 ILE C O doub N N 292 ILE C OXT sing N N 293 ILE CB CG1 sing N N 294 ILE CB CG2 sing N N 295 ILE CB HB sing N N 296 ILE CG1 CD1 sing N N 297 ILE CG1 HG12 sing N N 298 ILE CG1 HG13 sing N N 299 ILE CG2 HG21 sing N N 300 ILE CG2 HG22 sing N N 301 ILE CG2 HG23 sing N N 302 ILE CD1 HD11 sing N N 303 ILE CD1 HD12 sing N N 304 ILE CD1 HD13 sing N N 305 ILE OXT HXT sing N N 306 LEU N CA sing N N 307 LEU N H sing N N 308 LEU N H2 sing N N 309 LEU CA C sing N N 310 LEU CA CB sing N N 311 LEU CA HA sing N N 312 LEU C O doub N N 313 LEU C OXT sing N N 314 LEU CB CG sing N N 315 LEU CB HB2 sing N N 316 LEU CB HB3 sing N N 317 LEU CG CD1 sing N N 318 LEU CG CD2 sing N N 319 LEU CG HG sing N N 320 LEU CD1 HD11 sing N N 321 LEU CD1 HD12 sing N N 322 LEU CD1 HD13 sing N N 323 LEU CD2 HD21 sing N N 324 LEU CD2 HD22 sing N N 325 LEU CD2 HD23 sing N N 326 LEU OXT HXT sing N N 327 LYS N CA sing N N 328 LYS N H sing N N 329 LYS N H2 sing N N 330 LYS CA C sing N N 331 LYS CA CB sing N N 332 LYS CA HA sing N N 333 LYS C O doub N N 334 LYS C OXT sing N N 335 LYS CB CG sing N N 336 LYS CB HB2 sing N N 337 LYS CB HB3 sing N N 338 LYS CG CD sing N N 339 LYS CG HG2 sing N N 340 LYS CG HG3 sing N N 341 LYS CD CE sing N N 342 LYS CD HD2 sing N N 343 LYS CD HD3 sing N N 344 LYS CE NZ sing N N 345 LYS CE HE2 sing N N 346 LYS CE HE3 sing N N 347 LYS NZ HZ1 sing N N 348 LYS NZ HZ2 sing N N 349 LYS NZ HZ3 sing N N 350 LYS OXT HXT sing N N 351 MET N CA sing N N 352 MET N H sing N N 353 MET N H2 sing N N 354 MET CA C sing N N 355 MET CA CB sing N N 356 MET CA HA sing N N 357 MET C O doub N N 358 MET C OXT sing N N 359 MET CB CG sing N N 360 MET CB HB2 sing N N 361 MET CB HB3 sing N N 362 MET CG SD sing N N 363 MET CG HG2 sing N N 364 MET CG HG3 sing N N 365 MET SD CE sing N N 366 MET CE HE1 sing N N 367 MET CE HE2 sing N N 368 MET CE HE3 sing N N 369 MET OXT HXT sing N N 370 PHE N CA sing N N 371 PHE N H sing N N 372 PHE N H2 sing N N 373 PHE CA C sing N N 374 PHE CA CB sing N N 375 PHE CA HA sing N N 376 PHE C O doub N N 377 PHE C OXT sing N N 378 PHE CB CG sing N N 379 PHE CB HB2 sing N N 380 PHE CB HB3 sing N N 381 PHE CG CD1 doub Y N 382 PHE CG CD2 sing Y N 383 PHE CD1 CE1 sing Y N 384 PHE CD1 HD1 sing N N 385 PHE CD2 CE2 doub Y N 386 PHE CD2 HD2 sing N N 387 PHE CE1 CZ doub Y N 388 PHE CE1 HE1 sing N N 389 PHE CE2 CZ sing Y N 390 PHE CE2 HE2 sing N N 391 PHE CZ HZ sing N N 392 PHE OXT HXT sing N N 393 PRO N CA sing N N 394 PRO N CD sing N N 395 PRO N H sing N N 396 PRO CA C sing N N 397 PRO CA CB sing N N 398 PRO CA HA sing N N 399 PRO C O doub N N 400 PRO C OXT sing N N 401 PRO CB CG sing N N 402 PRO CB HB2 sing N N 403 PRO CB HB3 sing N N 404 PRO CG CD sing N N 405 PRO CG HG2 sing N N 406 PRO CG HG3 sing N N 407 PRO CD HD2 sing N N 408 PRO CD HD3 sing N N 409 PRO OXT HXT sing N N 410 SER N CA sing N N 411 SER N H sing N N 412 SER N H2 sing N N 413 SER CA C sing N N 414 SER CA CB sing N N 415 SER CA HA sing N N 416 SER C O doub N N 417 SER C OXT sing N N 418 SER CB OG sing N N 419 SER CB HB2 sing N N 420 SER CB HB3 sing N N 421 SER OG HG sing N N 422 SER OXT HXT sing N N 423 THR N CA sing N N 424 THR N H sing N N 425 THR N H2 sing N N 426 THR CA C sing N N 427 THR CA CB sing N N 428 THR CA HA sing N N 429 THR C O doub N N 430 THR C OXT sing N N 431 THR CB OG1 sing N N 432 THR CB CG2 sing N N 433 THR CB HB sing N N 434 THR OG1 HG1 sing N N 435 THR CG2 HG21 sing N N 436 THR CG2 HG22 sing N N 437 THR CG2 HG23 sing N N 438 THR OXT HXT sing N N 439 TRP N CA sing N N 440 TRP N H sing N N 441 TRP N H2 sing N N 442 TRP CA C sing N N 443 TRP CA CB sing N N 444 TRP CA HA sing N N 445 TRP C O doub N N 446 TRP C OXT sing N N 447 TRP CB CG sing N N 448 TRP CB HB2 sing N N 449 TRP CB HB3 sing N N 450 TRP CG CD1 doub Y N 451 TRP CG CD2 sing Y N 452 TRP CD1 NE1 sing Y N 453 TRP CD1 HD1 sing N N 454 TRP CD2 CE2 doub Y N 455 TRP CD2 CE3 sing Y N 456 TRP NE1 CE2 sing Y N 457 TRP NE1 HE1 sing N N 458 TRP CE2 CZ2 sing Y N 459 TRP CE3 CZ3 doub Y N 460 TRP CE3 HE3 sing N N 461 TRP CZ2 CH2 doub Y N 462 TRP CZ2 HZ2 sing N N 463 TRP CZ3 CH2 sing Y N 464 TRP CZ3 HZ3 sing N N 465 TRP CH2 HH2 sing N N 466 TRP OXT HXT sing N N 467 TYR N CA sing N N 468 TYR N H sing N N 469 TYR N H2 sing N N 470 TYR CA C sing N N 471 TYR CA CB sing N N 472 TYR CA HA sing N N 473 TYR C O doub N N 474 TYR C OXT sing N N 475 TYR CB CG sing N N 476 TYR CB HB2 sing N N 477 TYR CB HB3 sing N N 478 TYR CG CD1 doub Y N 479 TYR CG CD2 sing Y N 480 TYR CD1 CE1 sing Y N 481 TYR CD1 HD1 sing N N 482 TYR CD2 CE2 doub Y N 483 TYR CD2 HD2 sing N N 484 TYR CE1 CZ doub Y N 485 TYR CE1 HE1 sing N N 486 TYR CE2 CZ sing Y N 487 TYR CE2 HE2 sing N N 488 TYR CZ OH sing N N 489 TYR OH HH sing N N 490 TYR OXT HXT sing N N 491 VAL N CA sing N N 492 VAL N H sing N N 493 VAL N H2 sing N N 494 VAL CA C sing N N 495 VAL CA CB sing N N 496 VAL CA HA sing N N 497 VAL C O doub N N 498 VAL C OXT sing N N 499 VAL CB CG1 sing N N 500 VAL CB CG2 sing N N 501 VAL CB HB sing N N 502 VAL CG1 HG11 sing N N 503 VAL CG1 HG12 sing N N 504 VAL CG1 HG13 sing N N 505 VAL CG2 HG21 sing N N 506 VAL CG2 HG22 sing N N 507 VAL CG2 HG23 sing N N 508 VAL OXT HXT sing N N 509 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5ZUP 'double helix' 5ZUP 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 E DC 3 1_555 F DG 17 1_555 0.563 -0.068 -0.164 -2.458 -1.898 4.156 1 E_DC3:DG34_F E 3 ? F 34 ? 19 1 1 E DG 4 1_555 F DC 16 1_555 -0.508 -0.032 0.230 12.957 5.048 -0.292 2 E_DG4:DC33_F E 4 ? F 33 ? 19 1 1 E DC 5 1_555 F DG 15 1_555 0.321 -0.152 -0.058 -0.036 0.848 -2.882 3 E_DC5:DG32_F E 5 ? F 32 ? 19 1 1 E DG 6 1_555 F DC 14 1_555 -0.390 -0.194 0.086 4.630 0.543 -2.812 4 E_DG6:DC31_F E 6 ? F 31 ? 19 1 1 E DC 7 1_555 F DG 13 1_555 0.280 -0.101 -0.067 -0.925 8.281 -4.475 5 E_DC7:DG30_F E 7 ? F 30 ? 19 1 1 E DG 8 1_555 F DC 12 1_555 0.011 -0.240 -0.169 -0.559 4.924 -3.120 6 E_DG8:DC29_F E 8 ? F 29 ? 19 1 1 E DC 9 1_555 F DG 11 1_555 0.572 0.059 -0.441 3.369 9.257 4.712 7 E_DC9:DG28_F E 9 ? F 28 ? 19 1 1 E DA 10 1_555 F DC 10 1_555 -0.675 0.101 0.114 15.445 8.298 1.351 8 E_DA10:DC27_F E 10 ? F 27 ? ? 1 1 E DT 12 1_555 F DA 8 1_555 -0.449 -0.157 -0.070 10.410 -5.567 -0.332 9 E_DT12:DA25_F E 12 ? F 25 ? 20 1 1 E DA 13 1_555 F DT 7 1_555 -0.024 -0.409 0.571 18.403 -21.828 5.334 10 E_DA13:DT24_F E 13 ? F 24 ? 20 1 1 E DA 14 1_555 F DT 6 1_555 0.870 -0.240 0.272 10.507 -25.433 1.328 11 E_DA14:DT23_F E 14 ? F 23 ? 20 1 1 E DA 15 1_555 F DT 5 1_555 0.516 -0.262 0.305 5.337 -21.945 2.423 12 E_DA15:DT22_F E 15 ? F 22 ? 20 1 1 E DC 16 1_555 F DG 4 1_555 0.606 -0.207 -0.031 -5.838 -22.495 -1.515 13 E_DC16:DG21_F E 16 ? F 21 ? 19 1 1 E DC 17 1_555 F DG 3 1_555 -0.832 0.140 0.734 -5.955 10.199 9.601 14 E_DC17:DG20_F E 17 ? F 20 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 E DC 3 1_555 F DG 17 1_555 E DG 4 1_555 F DC 16 1_555 -0.115 5.746 -3.762 -0.822 -2.735 7.263 29.882 4.555 -5.501 -20.576 6.183 7.803 1 EE_DC3DG4:DC33DG34_FF E 3 ? F 34 ? E 4 ? F 33 ? 1 E DG 4 1_555 F DC 16 1_555 E DC 5 1_555 F DG 15 1_555 0.052 -1.148 -3.039 2.011 -12.196 51.673 -1.984 -0.174 -2.719 -13.768 -2.270 53.032 2 EE_DG4DC5:DG32DC33_FF E 4 ? F 33 ? E 5 ? F 32 ? 1 E DC 5 1_555 F DG 15 1_555 E DG 6 1_555 F DC 14 1_555 0.136 5.151 -3.663 -0.391 -1.474 5.620 39.920 1.516 -4.847 -14.681 3.891 5.823 3 EE_DC5DG6:DC31DG32_FF E 5 ? F 32 ? E 6 ? F 31 ? 1 E DG 6 1_555 F DC 14 1_555 E DC 7 1_555 F DG 13 1_555 -0.275 -0.964 -3.198 1.377 -4.749 56.450 -1.273 0.215 -3.120 -5.010 -1.453 56.648 4 EE_DG6DC7:DG30DC31_FF E 6 ? F 31 ? E 7 ? F 30 ? 1 E DC 7 1_555 F DG 13 1_555 E DG 8 1_555 F DC 12 1_555 -0.170 5.234 -3.683 0.980 1.973 7.540 43.747 -1.511 -2.244 14.598 -7.255 7.855 5 EE_DC7DG8:DC29DG30_FF E 7 ? F 30 ? E 8 ? F 29 ? 1 E DG 8 1_555 F DC 12 1_555 E DC 9 1_555 F DG 11 1_555 0.574 -1.142 -3.370 -0.726 -11.061 51.457 -2.012 -0.601 -3.088 -12.573 0.825 52.558 6 EE_DG8DC9:DG28DC29_FF E 8 ? F 29 ? E 9 ? F 28 ? 1 E DC 9 1_555 F DG 11 1_555 E DA 10 1_555 F DC 10 1_555 0.112 5.626 -4.016 1.845 2.141 10.458 33.396 -3.693 -2.750 11.473 -9.888 10.832 7 EE_DC9DA10:DC27DG28_FF E 9 ? F 28 ? E 10 ? F 27 ? 1 E DA 10 1_555 F DC 10 1_555 E DT 12 1_555 F DA 8 1_555 2.656 0.750 -1.785 -25.868 174.855 -38.873 0.574 1.469 -0.928 -88.497 -13.092 -176.943 8 EE_DA10DT12:DA25DC27_FF E 10 ? F 27 ? E 12 ? F 25 ? 1 E DT 12 1_555 F DA 8 1_555 E DA 13 1_555 F DT 7 1_555 -0.269 0.758 3.131 -5.544 7.067 38.752 0.307 -0.239 3.222 10.479 8.221 39.740 9 EE_DT12DA13:DT24DA25_FF E 12 ? F 25 ? E 13 ? F 24 ? 1 E DA 13 1_555 F DT 7 1_555 E DA 14 1_555 F DT 6 1_555 0.292 -0.115 3.717 2.577 -7.195 39.423 0.769 -0.089 3.692 -10.545 -3.777 40.128 10 EE_DA13DA14:DT23DT24_FF E 13 ? F 24 ? E 14 ? F 23 ? 1 E DA 14 1_555 F DT 6 1_555 E DA 15 1_555 F DT 5 1_555 0.226 -0.530 3.278 0.907 1.066 35.401 -1.028 -0.239 3.266 1.753 -1.490 35.428 11 EE_DA14DA15:DT22DT23_FF E 14 ? F 23 ? E 15 ? F 22 ? 1 E DA 15 1_555 F DT 5 1_555 E DC 16 1_555 F DG 4 1_555 -0.206 -0.526 3.527 0.874 -1.526 35.459 -0.622 0.476 3.539 -2.503 -1.433 35.502 12 EE_DA15DC16:DG21DT22_FF E 15 ? F 22 ? E 16 ? F 21 ? 1 E DC 16 1_555 F DG 4 1_555 E DC 17 1_555 F DG 3 1_555 1.917 0.909 3.679 -2.053 1.298 34.443 1.308 -3.583 3.593 2.188 3.462 34.526 13 EE_DC16DC17:DG20DG21_FF E 16 ? F 21 ? E 17 ? F 20 ? # _pdbx_audit_support.funding_organization ? _pdbx_audit_support.country 'Korea, Republic Of' _pdbx_audit_support.grant_number SSTF-BA1301-01 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 5ZUP _atom_sites.fract_transf_matrix[1][1] 0.008881 _atom_sites.fract_transf_matrix[1][2] 0.005127 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010254 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016173 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_