HEADER VIRAL PROTEIN 09-MAY-18 5ZV7 TITLE P DOMAIN OF GII.17-2014/15 COMPLEXED WITH B-TRISACCHARIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: VP1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: P DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOROVIRUS GII.17; SOURCE 3 ORGANISM_TAXID: 552592; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS CAPSID, PROTRUDING DOMAIN, DIMER, HBGA RECOGNITION, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.CHEN,X.LI REVDAT 5 22-NOV-23 5ZV7 1 HETSYN LINK REVDAT 4 29-JUL-20 5ZV7 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 25-DEC-19 5ZV7 1 REMARK REVDAT 2 17-APR-19 5ZV7 1 JRNL REVDAT 1 03-OCT-18 5ZV7 0 JRNL AUTH Y.QIAN,M.SONG,X.JIANG,M.XIA,J.MELLER,M.TAN,Y.CHEN,X.LI,Z.RAO JRNL TITL STRUCTURAL ADAPTATIONS OF NOROVIRUS GII.17/13/21 LINEAGE JRNL TITL 2 THROUGH TWO DISTINCT EVOLUTIONARY PATHS. JRNL REF J. VIROL. V. 93 2019 JRNL REFN ESSN 1098-5514 JRNL PMID 30333166 JRNL DOI 10.1128/JVI.01655-18 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7_650 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 46842 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 2384 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.9747 - 5.0123 0.98 2788 151 0.1833 0.1731 REMARK 3 2 5.0123 - 3.9794 0.96 2600 138 0.1747 0.1923 REMARK 3 3 3.9794 - 3.4767 0.95 2551 135 0.2000 0.2460 REMARK 3 4 3.4767 - 3.1590 0.99 2638 139 0.2055 0.2345 REMARK 3 5 3.1590 - 2.9326 0.99 2651 137 0.2170 0.2843 REMARK 3 6 2.9326 - 2.7598 1.00 2647 144 0.2281 0.2673 REMARK 3 7 2.7598 - 2.6216 1.00 2631 126 0.2288 0.2609 REMARK 3 8 2.6216 - 2.5075 1.00 2674 113 0.2294 0.2712 REMARK 3 9 2.5075 - 2.4109 1.00 2625 148 0.2329 0.2423 REMARK 3 10 2.4109 - 2.3278 1.00 2613 134 0.2082 0.2798 REMARK 3 11 2.3278 - 2.2550 0.99 2596 148 0.2228 0.3010 REMARK 3 12 2.2550 - 2.1905 0.99 2609 147 0.2240 0.2412 REMARK 3 13 2.1905 - 2.1329 1.00 2583 150 0.2164 0.2621 REMARK 3 14 2.1329 - 2.0808 1.00 2611 152 0.2177 0.2538 REMARK 3 15 2.0808 - 2.0335 0.99 2577 145 0.2339 0.3046 REMARK 3 16 2.0335 - 1.9903 0.99 2590 132 0.2333 0.2667 REMARK 3 17 1.9903 - 1.9504 0.95 2474 145 0.2373 0.2442 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 39.52 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.28880 REMARK 3 B22 (A**2) : -12.51820 REMARK 3 B33 (A**2) : 10.22940 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5027 REMARK 3 ANGLE : 1.287 6882 REMARK 3 CHIRALITY : 0.088 753 REMARK 3 PLANARITY : 0.006 918 REMARK 3 DIHEDRAL : 14.182 1799 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZV7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1300007705. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47017 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 44.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.41400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 12.70 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5ZUS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11% (W/V) POLYETHYLENE GLYCOL (PEG) REMARK 280 3350, 4%(V/V) TACSIMATE (PH7.0), VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.84950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.71550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.42550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.71550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.84950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.42550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 222 REMARK 465 LYS A 223 REMARK 465 THR A 224 REMARK 465 LYS A 225 REMARK 465 SER B 222 REMARK 465 LYS B 223 REMARK 465 THR B 224 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 832 O HOH B 851 1.76 REMARK 500 O HOH B 724 O HOH B 784 1.90 REMARK 500 O HOH B 772 O HOH B 869 2.02 REMARK 500 O HOH B 702 O HOH B 731 2.03 REMARK 500 O HOH A 701 O HOH A 817 2.08 REMARK 500 O HOH B 832 O HOH B 862 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 260 47.61 -148.66 REMARK 500 ASP A 518 -65.90 -102.90 REMARK 500 VAL A 521 -161.03 -126.26 REMARK 500 GLN B 260 47.53 -147.81 REMARK 500 HIS B 398 108.53 -52.52 REMARK 500 ASN B 425 38.92 -150.69 REMARK 500 ASP B 518 -66.85 -103.07 REMARK 500 VAL B 521 -163.20 -125.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 410 GLU A 411 -146.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 922 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH B 938 DISTANCE = 6.53 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ZV5 RELATED DB: PDB REMARK 900 5ZV5 CONTAINS THE SAME PROTEIN, BUT COMPLEXED WITH A-TRISACCHARIDE. REMARK 900 RELATED ID: 5ZUS RELATED DB: PDB REMARK 900 5ZUS CONTAINS THE SAME PROTEIN IN ITS NATIVE FORM. DBREF1 5ZV7 A 222 530 UNP A0A1C9I7R1_9CALI DBREF2 5ZV7 A A0A1C9I7R1 222 530 DBREF1 5ZV7 B 222 530 UNP A0A1C9I7R1_9CALI DBREF2 5ZV7 B A0A1C9I7R1 222 530 SEQRES 1 A 309 SER LYS THR LYS PRO PHE SER LEU PRO ILE LEU THR LEU SEQRES 2 A 309 SER GLU LEU THR ASN SER ARG PHE PRO VAL PRO ILE ASP SEQRES 3 A 309 SER LEU PHE THR ALA GLN ASN ASN VAL LEU GLN VAL GLN SEQRES 4 A 309 CYS GLN ASN GLY ARG CYS THR LEU ASP GLY GLU LEU GLN SEQRES 5 A 309 GLY THR THR GLN LEU LEU PRO SER GLY ILE CYS ALA PHE SEQRES 6 A 309 ARG GLY ARG VAL THR ALA GLN ILE ASN GLN ARG ASP ARG SEQRES 7 A 309 TRP HIS MET GLN LEU GLN ASN LEU ASN GLY THR THR TYR SEQRES 8 A 309 ASP PRO THR ASP ASP VAL PRO ALA PRO LEU GLY THR PRO SEQRES 9 A 309 ASP PHE LYS GLY VAL VAL PHE GLY MET VAL SER GLN ARG SEQRES 10 A 309 ASN VAL GLY ASN ASP ALA PRO GLY SER THR ARG ALA GLN SEQRES 11 A 309 GLN ALA TRP VAL SER THR TYR SER PRO GLN PHE VAL PRO SEQRES 12 A 309 LYS LEU GLY SER VAL ASN LEU ARG ILE SER ASP ASN ASP SEQRES 13 A 309 ASP PHE GLN PHE GLN PRO THR LYS PHE THR PRO VAL GLY SEQRES 14 A 309 VAL ASN ASP ASP ASP ASP GLY HIS PRO PHE ARG GLN TRP SEQRES 15 A 309 GLU LEU PRO ASN TYR SER GLY GLU LEU THR LEU ASN MET SEQRES 16 A 309 ASN LEU ALA PRO PRO VAL ALA PRO ASN PHE PRO GLY GLU SEQRES 17 A 309 GLN LEU LEU PHE PHE ARG SER PHE VAL PRO CYS SER GLY SEQRES 18 A 309 GLY TYR ASN GLN GLY ILE ILE ASP CYS LEU ILE PRO GLN SEQRES 19 A 309 GLU TRP ILE GLN HIS PHE TYR GLN GLU SER ALA PRO SER SEQRES 20 A 309 GLN SER ASP VAL ALA LEU ILE ARG TYR VAL ASN PRO ASP SEQRES 21 A 309 THR GLY ARG THR LEU PHE GLU ALA LYS LEU HIS ARG SER SEQRES 22 A 309 GLY TYR ILE THR VAL ALA HIS SER GLY ASP TYR PRO LEU SEQRES 23 A 309 VAL VAL PRO ALA ASN GLY HIS PHE ARG PHE ASP SER TRP SEQRES 24 A 309 VAL ASN GLN PHE TYR SER LEU ALA PRO MET SEQRES 1 B 309 SER LYS THR LYS PRO PHE SER LEU PRO ILE LEU THR LEU SEQRES 2 B 309 SER GLU LEU THR ASN SER ARG PHE PRO VAL PRO ILE ASP SEQRES 3 B 309 SER LEU PHE THR ALA GLN ASN ASN VAL LEU GLN VAL GLN SEQRES 4 B 309 CYS GLN ASN GLY ARG CYS THR LEU ASP GLY GLU LEU GLN SEQRES 5 B 309 GLY THR THR GLN LEU LEU PRO SER GLY ILE CYS ALA PHE SEQRES 6 B 309 ARG GLY ARG VAL THR ALA GLN ILE ASN GLN ARG ASP ARG SEQRES 7 B 309 TRP HIS MET GLN LEU GLN ASN LEU ASN GLY THR THR TYR SEQRES 8 B 309 ASP PRO THR ASP ASP VAL PRO ALA PRO LEU GLY THR PRO SEQRES 9 B 309 ASP PHE LYS GLY VAL VAL PHE GLY MET VAL SER GLN ARG SEQRES 10 B 309 ASN VAL GLY ASN ASP ALA PRO GLY SER THR ARG ALA GLN SEQRES 11 B 309 GLN ALA TRP VAL SER THR TYR SER PRO GLN PHE VAL PRO SEQRES 12 B 309 LYS LEU GLY SER VAL ASN LEU ARG ILE SER ASP ASN ASP SEQRES 13 B 309 ASP PHE GLN PHE GLN PRO THR LYS PHE THR PRO VAL GLY SEQRES 14 B 309 VAL ASN ASP ASP ASP ASP GLY HIS PRO PHE ARG GLN TRP SEQRES 15 B 309 GLU LEU PRO ASN TYR SER GLY GLU LEU THR LEU ASN MET SEQRES 16 B 309 ASN LEU ALA PRO PRO VAL ALA PRO ASN PHE PRO GLY GLU SEQRES 17 B 309 GLN LEU LEU PHE PHE ARG SER PHE VAL PRO CYS SER GLY SEQRES 18 B 309 GLY TYR ASN GLN GLY ILE ILE ASP CYS LEU ILE PRO GLN SEQRES 19 B 309 GLU TRP ILE GLN HIS PHE TYR GLN GLU SER ALA PRO SER SEQRES 20 B 309 GLN SER ASP VAL ALA LEU ILE ARG TYR VAL ASN PRO ASP SEQRES 21 B 309 THR GLY ARG THR LEU PHE GLU ALA LYS LEU HIS ARG SER SEQRES 22 B 309 GLY TYR ILE THR VAL ALA HIS SER GLY ASP TYR PRO LEU SEQRES 23 B 309 VAL VAL PRO ALA ASN GLY HIS PHE ARG PHE ASP SER TRP SEQRES 24 B 309 VAL ASN GLN PHE TYR SER LEU ALA PRO MET HET GLA C 1 12 HET FUC C 2 10 HET GLA C 3 11 HET GLA D 1 12 HET FUC D 2 10 HET GLA D 3 11 HETNAM GLA ALPHA-D-GALACTOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN GLA ALPHA-D-GALACTOSE; D-GALACTOSE; GALACTOSE; ALPHA D- HETSYN 2 GLA GALACTOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 3 GLA 4(C6 H12 O6) FORMUL 3 FUC 2(C6 H12 O5) FORMUL 5 HOH *460(H2 O) HELIX 1 AA1 THR A 233 LEU A 237 5 5 HELIX 2 AA2 LEU A 279 ILE A 283 5 5 HELIX 3 AA3 PRO A 454 SER A 465 1 12 HELIX 4 AA4 THR B 233 LEU B 237 5 5 HELIX 5 AA5 LEU B 279 ILE B 283 5 5 HELIX 6 AA6 PRO B 454 SER B 465 1 12 SHEET 1 AA1 4 ILE A 448 CYS A 451 0 SHEET 2 AA1 4 GLU A 429 PHE A 437 -1 N PHE A 434 O CYS A 451 SHEET 3 AA1 4 SER A 248 THR A 251 -1 N PHE A 250 O PHE A 433 SHEET 4 AA1 4 TYR A 505 PRO A 506 -1 O TYR A 505 N THR A 251 SHEET 1 AA2 6 ILE A 448 CYS A 451 0 SHEET 2 AA2 6 GLU A 429 PHE A 437 -1 N PHE A 434 O CYS A 451 SHEET 3 AA2 6 TYR A 496 ALA A 500 -1 O VAL A 499 N GLN A 430 SHEET 4 AA2 6 THR A 485 HIS A 492 -1 N HIS A 492 O TYR A 496 SHEET 5 AA2 6 VAL A 472 VAL A 478 -1 N ALA A 473 O LEU A 491 SHEET 6 AA2 6 HIS A 514 VAL A 521 -1 O SER A 519 N LEU A 474 SHEET 1 AA3 7 PHE A 286 GLN A 293 0 SHEET 2 AA3 7 TRP A 300 LEU A 304 -1 O GLN A 303 N ARG A 289 SHEET 3 AA3 7 SER A 368 ILE A 373 -1 O VAL A 369 N MET A 302 SHEET 4 AA3 7 THR A 348 SER A 356 -1 N TRP A 354 O ARG A 372 SHEET 5 AA3 7 VAL A 330 ARG A 338 -1 N VAL A 335 O GLN A 351 SHEET 6 AA3 7 PRO A 383 ASN A 392 -1 O VAL A 389 N PHE A 332 SHEET 7 AA3 7 PHE A 286 GLN A 293 -1 N GLY A 288 O THR A 384 SHEET 1 AA4 4 ILE B 448 CYS B 451 0 SHEET 2 AA4 4 GLU B 429 PHE B 437 -1 N PHE B 434 O CYS B 451 SHEET 3 AA4 4 SER B 248 THR B 251 -1 N PHE B 250 O PHE B 433 SHEET 4 AA4 4 TYR B 505 PRO B 506 -1 O TYR B 505 N THR B 251 SHEET 1 AA5 6 ILE B 448 CYS B 451 0 SHEET 2 AA5 6 GLU B 429 PHE B 437 -1 N PHE B 434 O CYS B 451 SHEET 3 AA5 6 TYR B 496 ALA B 500 -1 O VAL B 499 N GLN B 430 SHEET 4 AA5 6 THR B 485 HIS B 492 -1 N HIS B 492 O TYR B 496 SHEET 5 AA5 6 VAL B 472 VAL B 478 -1 N ALA B 473 O LEU B 491 SHEET 6 AA5 6 HIS B 514 VAL B 521 -1 O SER B 519 N LEU B 474 SHEET 1 AA6 7 PHE B 286 GLN B 293 0 SHEET 2 AA6 7 TRP B 300 LEU B 304 -1 O HIS B 301 N ALA B 292 SHEET 3 AA6 7 SER B 368 ILE B 373 -1 O VAL B 369 N MET B 302 SHEET 4 AA6 7 THR B 348 SER B 356 -1 N TRP B 354 O ARG B 372 SHEET 5 AA6 7 VAL B 330 ARG B 338 -1 N VAL B 335 O GLN B 351 SHEET 6 AA6 7 PRO B 383 ASN B 392 -1 O VAL B 389 N PHE B 332 SHEET 7 AA6 7 PHE B 286 GLN B 293 -1 N GLY B 288 O THR B 384 LINK O2 GLA C 1 C1 FUC C 2 1555 1555 1.35 LINK O3 GLA C 1 C1 GLA C 3 1555 1555 1.41 LINK O2 GLA D 1 C1 FUC D 2 1555 1555 1.37 LINK O3 GLA D 1 C1 GLA D 3 1555 1555 1.41 CRYST1 75.699 86.851 97.431 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013210 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011514 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010264 0.00000