HEADER HYDROLASE 20-MAY-18 5ZXG TITLE CYCLIC ALPHA-MALTOSYL-(1-->6)-MALTOSE HYDROLASE FROM ARTHROBACTER TITLE 2 GLOBIFORMIS, LIGAND-FREE FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC MALTOSYL-MALTOSE HYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARTHROBACTER GLOBIFORMIS; SOURCE 3 ORGANISM_TAXID: 1665; SOURCE 4 GENE: CMMF; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.KOHNO,T.ARAKAWA,T.MORI,T.NISHIMOTO,S.FUSHINOBU REVDAT 4 22-NOV-23 5ZXG 1 REMARK REVDAT 3 07-NOV-18 5ZXG 1 JRNL REVDAT 2 19-SEP-18 5ZXG 1 JRNL REVDAT 1 12-SEP-18 5ZXG 0 JRNL AUTH M.KOHNO,T.ARAKAWA,H.OTA,T.MORI,T.NISHIMOTO,S.FUSHINOBU JRNL TITL STRUCTURAL FEATURES OF A BACTERIAL CYCLIC JRNL TITL 2 ALPHA-MALTOSYL-(1→6)-MALTOSE (CMM) HYDROLASE CRITICAL JRNL TITL 3 FOR CMM RECOGNITION AND HYDROLYSIS. JRNL REF J. BIOL. CHEM. V. 293 16874 2018 JRNL REFN ESSN 1083-351X JRNL PMID 30181215 JRNL DOI 10.1074/JBC.RA118.004472 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.MORI,T.NISHIMOTO,T.OKURA,H.CHAEN,S.FUKUDA REMARK 1 TITL PURIFICATION AND CHARACTERIZATION OF CYCLIC REMARK 1 TITL 2 MALTOSYL-(1-->6)-MALTOSE HYDROLASE AND ALPHA-GLUCOSIDASE REMARK 1 TITL 3 FROM AN ARTHROBACTER GLOBIFORMIS STRAIN. REMARK 1 REF BIOSCI. BIOTECHNOL. BIOCHEM. V. 72 1673 2008 REMARK 1 REFN ISSN 1347-6947 REMARK 1 PMID 18603794 REMARK 1 DOI 10.1271/BBB.70759 REMARK 1 REFERENCE 2 REMARK 1 AUTH T.MORI,T.NISHIMOTO,T.OKURA,H.CHAEN,S.FUKUDA REMARK 1 TITL CLONING, SEQUENCING AND EXPRESSION OF THE GENES ENCODING REMARK 1 TITL 2 CYCLIC ALPHA-MALTOSYL-(1-->6)-MALTOSE HYDROLASE AND REMARK 1 TITL 3 ALPHA-GLUCOSIDASE FROM AN ARTHROBACTER GLOBIFORMIS STRAIN REMARK 1 REF JOURNAL OF APPLIED V. 58 39 2011 REMARK 1 REF 2 GLYCOSCIENCE REMARK 1 REFN ISSN 1344-7882 REMARK 1 DOI 10.5458/JAG.JAG.JAG-2010_011 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 89.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 3 NUMBER OF REFLECTIONS : 33636 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1836 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2328 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.1950 REMARK 3 BIN FREE R VALUE SET COUNT : 136 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6846 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 256 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.550 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.286 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.183 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.690 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.895 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7042 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6185 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9626 ; 1.855 ; 1.924 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14245 ; 1.154 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 876 ; 7.103 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 355 ;34.830 ;23.296 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 983 ;16.341 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 54 ;22.252 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1035 ; 0.139 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8100 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1582 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3513 ; 1.958 ; 2.639 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3512 ; 1.956 ; 2.638 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4386 ; 3.097 ; 3.953 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4387 ; 3.098 ; 3.953 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3529 ; 2.065 ; 2.751 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3530 ; 2.064 ; 2.752 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5241 ; 3.233 ; 4.078 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 8105 ; 4.821 ;30.841 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 8087 ; 4.809 ;30.842 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5ZXG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1300006769. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER R 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35608 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 89.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 0.2320 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.09600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.131 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1J0H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE, 0.22 M AMMONIUM REMARK 280 SULFATE, 30% (W/V) PEG4000, PH 5.6, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 89.89900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 THR A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 445 REMARK 465 SER A 446 REMARK 465 PRO A 447 REMARK 465 GLY A 448 REMARK 465 SER A 449 REMARK 465 SER A 450 REMARK 465 ALA A 451 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 GLU B 422 REMARK 465 LEU B 423 REMARK 465 ALA B 424 REMARK 465 PRO B 425 REMARK 465 SER B 446 REMARK 465 PRO B 447 REMARK 465 GLY B 448 REMARK 465 SER B 449 REMARK 465 SER B 450 REMARK 465 ALA B 451 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 157 C - N - CA ANGL. DEV. = 11.9 DEGREES REMARK 500 PRO A 157 C - N - CD ANGL. DEV. = -12.9 DEGREES REMARK 500 ARG A 181 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 181 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG A 189 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 200 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 288 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 359 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP B 86 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG B 189 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG B 254 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ASP B 309 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG B 402 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 22 132.32 -171.10 REMARK 500 ASP A 83 56.69 -117.56 REMARK 500 ASP A 86 107.04 -166.30 REMARK 500 GLU A 137 -123.65 60.42 REMARK 500 HIS A 156 -83.08 -6.31 REMARK 500 PRO A 157 -88.07 -64.71 REMARK 500 ASN A 160 31.87 -92.75 REMARK 500 VAL A 203 62.74 30.06 REMARK 500 ILE A 207 -125.44 -111.37 REMARK 500 ARG A 234 -143.10 -114.06 REMARK 500 THR A 244 -83.50 -125.14 REMARK 500 ALA A 262 -51.02 -127.53 REMARK 500 SER A 419 -3.91 67.92 REMARK 500 ASP B 83 53.83 -93.52 REMARK 500 ASP B 86 105.45 -171.70 REMARK 500 GLU B 137 -125.33 56.32 REMARK 500 ASN B 160 35.89 -92.34 REMARK 500 LEU B 170 69.66 -116.19 REMARK 500 VAL B 203 55.67 29.20 REMARK 500 ILE B 207 -130.96 -100.48 REMARK 500 ARG B 234 -147.33 -106.20 REMARK 500 THR B 244 -85.37 -120.97 REMARK 500 ASP B 342 125.24 -28.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 23 OD1 REMARK 620 2 ASP A 25 O 92.2 REMARK 620 3 ASP A 29 OD1 78.1 94.8 REMARK 620 4 GLY A 47 O 80.1 171.4 87.6 REMARK 620 5 ASP A 49 OD2 86.0 83.2 163.9 92.3 REMARK 620 6 HOH A 685 O 146.2 116.0 81.0 72.6 114.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 501 DBREF 5ZXG A 4 451 UNP D2YYE1 D2YYE1_ARTGO 3 450 DBREF 5ZXG B 4 451 UNP D2YYE1 D2YYE1_ARTGO 3 450 SEQADV 5ZXG MET A -19 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG GLY A -18 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG SER A -17 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG SER A -16 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS A -15 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS A -14 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS A -13 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS A -12 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS A -11 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS A -10 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG SER A -9 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG SER A -8 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG GLY A -7 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG LEU A -6 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG VAL A -5 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG PRO A -4 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG ARG A -3 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG GLY A -2 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG SER A -1 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS A 0 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG MET A 1 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG VAL A 2 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG THR A 3 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG MET B -19 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG GLY B -18 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG SER B -17 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG SER B -16 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS B -15 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS B -14 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS B -13 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS B -12 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS B -11 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS B -10 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG SER B -9 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG SER B -8 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG GLY B -7 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG LEU B -6 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG VAL B -5 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG PRO B -4 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG ARG B -3 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG GLY B -2 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG SER B -1 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG HIS B 0 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG MET B 1 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG VAL B 2 UNP D2YYE1 EXPRESSION TAG SEQADV 5ZXG THR B 3 UNP D2YYE1 EXPRESSION TAG SEQRES 1 A 471 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 471 LEU VAL PRO ARG GLY SER HIS MET VAL THR ALA PRO ASP SEQRES 3 A 471 TRP LEU ALA ASP ALA VAL PHE TYR GLN ILE PHE PRO GLU SEQRES 4 A 471 ARG PHE ALA ASN ALA ASP PRO SER LEU ASP PRO GLN ASN SEQRES 5 A 471 VAL VAL PRO TRP GLY SER THR PRO THR PRO ASP ASN PHE SEQRES 6 A 471 PHE GLY GLY ASP LEU GLN GLY ILE ILE ASP HIS LEU ASP SEQRES 7 A 471 HIS ILE VAL ALA LEU GLY ALA ASN ALA LEU TYR LEU THR SEQRES 8 A 471 PRO ILE PHE GLU ALA ASP THR ASN HIS ARG TYR ASP ALA SEQRES 9 A 471 LYS ASP TYR PHE SER ILE ASP HIS ARG LEU GLY THR LEU SEQRES 10 A 471 GLU THR PHE HIS ALA LEU MET ALA GLU CYS ARG ALA ARG SEQRES 11 A 471 GLY ILE ARG ILE VAL LEU ASP ALA VAL LEU ASN HIS CYS SEQRES 12 A 471 GLY ASP GLY HIS TRP ALA PHE ALA ASP VAL VAL GLU ASN SEQRES 13 A 471 GLU ALA ASP SER ALA TYR VAL ASN TRP PHE SER VAL GLU SEQRES 14 A 471 GLY PHE PRO VAL THR ALA HIS PRO THR PRO ASN TYR ARG SEQRES 15 A 471 THR CYS SER GLY CYS TYR TYR LEU PRO LYS TRP ASN ALA SEQRES 16 A 471 TYR ASN PRO GLU VAL ARG HIS HIS HIS LEU ASP VAL ALA SEQRES 17 A 471 ARG TYR TRP ILE ASP GLN GLY ILE ASP GLY TRP ARG LEU SEQRES 18 A 471 ASP VAL PRO TYR PHE ILE ASN HIS THR PHE TRP ARG GLU SEQRES 19 A 471 PHE ARG THR ALA VAL LYS GLY LYS SER GLU ASP LEU TYR SEQRES 20 A 471 ILE VAL ALA GLU GLU TRP ARG SER PRO VAL GLU TRP LEU SEQRES 21 A 471 GLN GLY ASP THR ALA ASP GLY THR MET ASN TYR THR ALA SEQRES 22 A 471 ARG ASP LEU ILE LEU GLY PHE THR ALA ASP GLY GLY ILE SEQRES 23 A 471 ASP ALA SER ALA LEU ALA ALA GLY LEU ASN ALA LEU HIS SEQRES 24 A 471 ALA GLU ILE PRO ALA GLY PHE HIS ARG GLY MET LEU ASN SEQRES 25 A 471 LEU LEU GLY SER HIS ASP THR GLU ARG VAL LEU THR ARG SEQRES 26 A 471 HIS ALA GLY ASP VAL GLU ALA ALA LEU LEU SER TYR ALA SEQRES 27 A 471 LEU LEU PHE SER LEU GLU GLY ALA PRO MET VAL TYR TYR SEQRES 28 A 471 GLY ASP GLU VAL GLY LEU THR GLY ASP ASN ASP PRO GLY SEQRES 29 A 471 CYS ARG GLY ALA MET PRO TRP ASN GLU GLU SER TRP ASN SEQRES 30 A 471 THR ARG LEU LEU ASP GLY ILE ARG THR PHE ALA ALA PHE SEQRES 31 A 471 ARG ALA HIS GLN PRO ALA MET ARG ARG GLY ARG GLN THR SEQRES 32 A 471 ALA VAL ALA LEU ASP ALA ASP THR ILE ALA ILE VAL ARG SEQRES 33 A 471 SER GLY GLY ASP GLU ARG ALA ALA VAL ILE VAL HIS ARG SEQRES 34 A 471 GLY GLU GLY THR THR VAL ASP THR ALA SER ILE PRO GLU SEQRES 35 A 471 LEU ALA PRO LEU ASP ALA ASP THR VAL VAL LEU GLY PRO SEQRES 36 A 471 LEU GLY THR ALA SER LEU ALA THR ALA ALA SER PRO GLY SEQRES 37 A 471 SER SER ALA SEQRES 1 B 471 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 471 LEU VAL PRO ARG GLY SER HIS MET VAL THR ALA PRO ASP SEQRES 3 B 471 TRP LEU ALA ASP ALA VAL PHE TYR GLN ILE PHE PRO GLU SEQRES 4 B 471 ARG PHE ALA ASN ALA ASP PRO SER LEU ASP PRO GLN ASN SEQRES 5 B 471 VAL VAL PRO TRP GLY SER THR PRO THR PRO ASP ASN PHE SEQRES 6 B 471 PHE GLY GLY ASP LEU GLN GLY ILE ILE ASP HIS LEU ASP SEQRES 7 B 471 HIS ILE VAL ALA LEU GLY ALA ASN ALA LEU TYR LEU THR SEQRES 8 B 471 PRO ILE PHE GLU ALA ASP THR ASN HIS ARG TYR ASP ALA SEQRES 9 B 471 LYS ASP TYR PHE SER ILE ASP HIS ARG LEU GLY THR LEU SEQRES 10 B 471 GLU THR PHE HIS ALA LEU MET ALA GLU CYS ARG ALA ARG SEQRES 11 B 471 GLY ILE ARG ILE VAL LEU ASP ALA VAL LEU ASN HIS CYS SEQRES 12 B 471 GLY ASP GLY HIS TRP ALA PHE ALA ASP VAL VAL GLU ASN SEQRES 13 B 471 GLU ALA ASP SER ALA TYR VAL ASN TRP PHE SER VAL GLU SEQRES 14 B 471 GLY PHE PRO VAL THR ALA HIS PRO THR PRO ASN TYR ARG SEQRES 15 B 471 THR CYS SER GLY CYS TYR TYR LEU PRO LYS TRP ASN ALA SEQRES 16 B 471 TYR ASN PRO GLU VAL ARG HIS HIS HIS LEU ASP VAL ALA SEQRES 17 B 471 ARG TYR TRP ILE ASP GLN GLY ILE ASP GLY TRP ARG LEU SEQRES 18 B 471 ASP VAL PRO TYR PHE ILE ASN HIS THR PHE TRP ARG GLU SEQRES 19 B 471 PHE ARG THR ALA VAL LYS GLY LYS SER GLU ASP LEU TYR SEQRES 20 B 471 ILE VAL ALA GLU GLU TRP ARG SER PRO VAL GLU TRP LEU SEQRES 21 B 471 GLN GLY ASP THR ALA ASP GLY THR MET ASN TYR THR ALA SEQRES 22 B 471 ARG ASP LEU ILE LEU GLY PHE THR ALA ASP GLY GLY ILE SEQRES 23 B 471 ASP ALA SER ALA LEU ALA ALA GLY LEU ASN ALA LEU HIS SEQRES 24 B 471 ALA GLU ILE PRO ALA GLY PHE HIS ARG GLY MET LEU ASN SEQRES 25 B 471 LEU LEU GLY SER HIS ASP THR GLU ARG VAL LEU THR ARG SEQRES 26 B 471 HIS ALA GLY ASP VAL GLU ALA ALA LEU LEU SER TYR ALA SEQRES 27 B 471 LEU LEU PHE SER LEU GLU GLY ALA PRO MET VAL TYR TYR SEQRES 28 B 471 GLY ASP GLU VAL GLY LEU THR GLY ASP ASN ASP PRO GLY SEQRES 29 B 471 CYS ARG GLY ALA MET PRO TRP ASN GLU GLU SER TRP ASN SEQRES 30 B 471 THR ARG LEU LEU ASP GLY ILE ARG THR PHE ALA ALA PHE SEQRES 31 B 471 ARG ALA HIS GLN PRO ALA MET ARG ARG GLY ARG GLN THR SEQRES 32 B 471 ALA VAL ALA LEU ASP ALA ASP THR ILE ALA ILE VAL ARG SEQRES 33 B 471 SER GLY GLY ASP GLU ARG ALA ALA VAL ILE VAL HIS ARG SEQRES 34 B 471 GLY GLU GLY THR THR VAL ASP THR ALA SER ILE PRO GLU SEQRES 35 B 471 LEU ALA PRO LEU ASP ALA ASP THR VAL VAL LEU GLY PRO SEQRES 36 B 471 LEU GLY THR ALA SER LEU ALA THR ALA ALA SER PRO GLY SEQRES 37 B 471 SER SER ALA HET CA A 501 1 HETNAM CA CALCIUM ION FORMUL 3 CA CA 2+ FORMUL 4 HOH *256(H2 O) HELIX 1 AA1 PRO A 5 ALA A 11 5 7 HELIX 2 AA2 PHE A 17 PHE A 21 5 5 HELIX 3 AA3 ASP A 25 ASP A 29 5 5 HELIX 4 AA4 ASP A 49 HIS A 56 1 8 HELIX 5 AA5 HIS A 56 GLY A 64 1 9 HELIX 6 AA6 THR A 96 ARG A 110 1 15 HELIX 7 AA7 HIS A 127 GLU A 137 1 11 HELIX 8 AA8 ALA A 138 SER A 140 5 3 HELIX 9 AA9 TYR A 142 PHE A 146 5 5 HELIX 10 AB1 ASN A 177 GLN A 194 1 18 HELIX 11 AB2 VAL A 203 ILE A 207 5 5 HELIX 12 AB3 ASN A 208 SER A 223 1 16 HELIX 13 AB4 PRO A 236 LEU A 240 5 5 HELIX 14 AB5 ASN A 250 ALA A 262 1 13 HELIX 15 AB6 ASP A 267 ILE A 282 1 16 HELIX 16 AB7 ARG A 301 HIS A 306 1 6 HELIX 17 AB8 ASP A 309 LEU A 323 1 15 HELIX 18 AB9 GLY A 332 GLY A 336 5 5 HELIX 19 AC1 ASN A 352 TRP A 356 5 5 HELIX 20 AC2 ASN A 357 GLN A 374 1 18 HELIX 21 AC3 PRO A 375 GLY A 380 1 6 HELIX 22 AC4 PRO B 5 ALA B 11 5 7 HELIX 23 AC5 PHE B 17 PHE B 21 5 5 HELIX 24 AC6 ASP B 25 ASP B 29 5 5 HELIX 25 AC7 ASP B 49 ASP B 55 1 7 HELIX 26 AC8 HIS B 56 GLY B 64 1 9 HELIX 27 AC9 THR B 96 ARG B 110 1 15 HELIX 28 AD1 HIS B 127 GLU B 137 1 11 HELIX 29 AD2 ALA B 138 SER B 140 5 3 HELIX 30 AD3 TYR B 142 PHE B 146 5 5 HELIX 31 AD4 ASN B 177 GLN B 194 1 18 HELIX 32 AD5 VAL B 203 ILE B 207 5 5 HELIX 33 AD6 ASN B 208 SER B 223 1 16 HELIX 34 AD7 PRO B 236 LEU B 240 5 5 HELIX 35 AD8 TYR B 251 ALA B 262 1 12 HELIX 36 AD9 ASP B 267 ILE B 282 1 16 HELIX 37 AE1 PHE B 286 GLY B 289 5 4 HELIX 38 AE2 ARG B 301 HIS B 306 1 6 HELIX 39 AE3 ASP B 309 LEU B 323 1 15 HELIX 40 AE4 GLY B 332 GLY B 336 5 5 HELIX 41 AE5 ASN B 352 TRP B 356 5 5 HELIX 42 AE6 ASN B 357 GLN B 374 1 18 HELIX 43 AE7 GLN B 374 GLY B 380 1 7 HELIX 44 AE8 ALA B 418 ILE B 420 5 3 SHEET 1 AA1 8 GLY A 247 THR A 248 0 SHEET 2 AA1 8 TYR A 227 ALA A 230 1 N ALA A 230 O GLY A 247 SHEET 3 AA1 8 GLY A 198 LEU A 201 1 N TRP A 199 O VAL A 229 SHEET 4 AA1 8 ARG A 113 ALA A 118 1 N LEU A 116 O ARG A 200 SHEET 5 AA1 8 ALA A 67 LEU A 70 1 N LEU A 70 O VAL A 115 SHEET 6 AA1 8 PHE A 13 ILE A 16 1 N ILE A 16 O TYR A 69 SHEET 7 AA1 8 ALA A 326 TYR A 330 1 O PRO A 327 N PHE A 13 SHEET 8 AA1 8 LEU A 291 LEU A 293 1 N ASN A 292 O ALA A 326 SHEET 1 AA2 2 PHE A 74 ALA A 76 0 SHEET 2 AA2 2 ALA A 84 ILE A 90 -1 O LYS A 85 N GLU A 75 SHEET 1 AA3 6 ARG A 381 ASP A 388 0 SHEET 2 AA3 6 THR A 391 GLY A 398 -1 O ALA A 393 N VAL A 385 SHEET 3 AA3 6 GLU A 401 HIS A 408 -1 O ALA A 403 N ARG A 396 SHEET 4 AA3 6 THR A 438 ALA A 442 -1 O ALA A 439 N ILE A 406 SHEET 5 AA3 6 THR B 430 LEU B 433 -1 O THR B 430 N ALA A 442 SHEET 6 AA3 6 THR B 413 ASP B 416 -1 N THR B 413 O LEU B 433 SHEET 1 AA4 6 THR A 413 ASP A 416 0 SHEET 2 AA4 6 THR A 430 LEU A 433 -1 O VAL A 431 N VAL A 415 SHEET 3 AA4 6 THR B 438 ALA B 444 -1 O SER B 440 N VAL A 432 SHEET 4 AA4 6 GLU B 401 HIS B 408 -1 N ILE B 406 O ALA B 439 SHEET 5 AA4 6 THR B 391 SER B 397 -1 N ILE B 392 O VAL B 407 SHEET 6 AA4 6 ARG B 381 ASP B 388 -1 N VAL B 385 O ALA B 393 SHEET 1 AA5 9 PHE B 13 ILE B 16 0 SHEET 2 AA5 9 ALA B 67 LEU B 70 1 O TYR B 69 N ILE B 16 SHEET 3 AA5 9 ARG B 113 ALA B 118 1 O VAL B 115 N LEU B 70 SHEET 4 AA5 9 GLY B 198 LEU B 201 1 O ARG B 200 N LEU B 116 SHEET 5 AA5 9 TYR B 227 ALA B 230 1 O TYR B 227 N TRP B 199 SHEET 6 AA5 9 GLY B 247 ASN B 250 1 O GLY B 247 N ALA B 230 SHEET 7 AA5 9 LEU B 291 LEU B 293 1 O LEU B 291 N THR B 248 SHEET 8 AA5 9 ALA B 326 TYR B 330 1 O ALA B 326 N ASN B 292 SHEET 9 AA5 9 PHE B 13 ILE B 16 1 N PHE B 13 O VAL B 329 SHEET 1 AA6 2 PHE B 74 ALA B 76 0 SHEET 2 AA6 2 ALA B 84 ILE B 90 -1 O LYS B 85 N GLU B 75 LINK OD1 ASN A 23 CA CA A 501 1555 1555 2.61 LINK O ASP A 25 CA CA A 501 1555 1555 2.72 LINK OD1 ASP A 29 CA CA A 501 1555 1555 2.60 LINK O GLY A 47 CA CA A 501 1555 1555 2.45 LINK OD2 ASP A 49 CA CA A 501 1555 1555 2.50 LINK CA CA A 501 O HOH A 685 1555 1555 2.82 CISPEP 1 PHE A 151 PRO A 152 0 -2.49 CISPEP 2 ASP A 342 PRO A 343 0 9.38 CISPEP 3 PHE B 151 PRO B 152 0 11.14 CISPEP 4 HIS B 156 PRO B 157 0 -21.24 CISPEP 5 ASP B 342 PRO B 343 0 4.95 SITE 1 AC1 6 ASN A 23 ASP A 25 ASP A 29 GLY A 47 SITE 2 AC1 6 ASP A 49 HOH A 685 CRYST1 48.250 179.798 63.412 90.00 113.61 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020725 0.000000 0.009058 0.00000 SCALE2 0.000000 0.005562 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017210 0.00000