HEADER FLAVOPROTEIN 28-MAY-18 5ZYR TITLE CRYSTAL STRUCTURE OF THE REDUCTASE (C1) COMPONENT OF P- TITLE 2 HYDROXYPHENYLACETATE 3-HYDROXYLASE (HPAH) FROM ACINETOBACTER TITLE 3 BAUMANNII COMPND MOL_ID: 1; COMPND 2 MOLECULE: P-HYDROXYPHENYLACETATE 3-HYDROXYLASE, REDUCTASE COMPONENT; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 4-HPA 3-MONOOXYGENASE SMALL COMPONENT,FLAVIN:NAD(+) COMPND 5 OXIDOREDUCTASE,P-HYDROXYPHENYLACETATE 3-HYDROXYLASE C1 COMPONENT; COMPND 6 EC: 1.5.1.36; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 GENE: C1-HPAH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS REDUCTASE, MONOOXYGENASE, ACINETOBACTER BAUMANNII, FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.OONANANT,T.PHONGSAK,J.SUCHARITAKUL,P.CHAIYEN,J.YUVANIYAMA REVDAT 2 27-MAR-24 5ZYR 1 REMARK REVDAT 1 05-JUN-19 5ZYR 0 JRNL AUTH W.OONANANT,T.PHONGSAK,J.SUCHARITAKUL,P.CHAIYEN,J.YUVANIYAMA JRNL TITL CRYSTAL STRUCTURE OF THE REDUCTASE (C1) COMPONENT OF JRNL TITL 2 P-HYDROXYPHENYLACETATE 3-HYDROXYLASE (HPAH) FROM JRNL TITL 3 ACINETOBACTER BAUMANNII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.OONANANT,J.SUCHARITAKUL,P.CHAIYEN,J.YUVANIYAMA REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY ANALYSIS OF THE REMARK 1 TITL 2 REDUCTASE COMPONENT OF P-HYDROXYPHENYLACETATE 3-HYDROXYLASE REMARK 1 TITL 3 FROM ACINETOBACTER BAUMANNII REMARK 1 REF ACTA CRYSTALLOGR. SECT. F V. 68 720 2012 REMARK 1 REF 2 STRUCT. BIOL. CRYST. COMMUN. REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 22684080 REMARK 1 DOI 10.1107/S1744309112016909 REMARK 1 REFERENCE 2 REMARK 1 AUTH T.PHONGSAK,J.SUCHARITAKUL,K.THOTSAPORN,W.OONANANT, REMARK 1 AUTH 2 J.YUVANIYAMA,J.SVASTI,D.P.BALLOU,P.CHAIYEN REMARK 1 TITL THE C-TERMINAL DOMAIN OF 4-HYDROXYPHENYLACETATE REMARK 1 TITL 2 3-HYDROXYLASE FROM ACINETOBACTER BAUMANNII IS AN REMARK 1 TITL 3 AUTOINHIBITORY DOMAIN REMARK 1 REF J. BIOL. CHEM. V. 287 26213 2012 REMARK 1 REFN ESSN 1083-351X REMARK 1 PMID 22661720 REMARK 1 DOI 10.1074/JBC.M112.354472 REMARK 1 REFERENCE 3 REMARK 1 AUTH P.D.ADAMS,P.V.AFONINE,G.BUNKOCZI,V.B.CHEN,I.W.DAVIS, REMARK 1 AUTH 2 N.ECHOLS,J.J.HEADD,L.W.HUNG,G.J.KAPRAL,R.W.GROSSE-KUNSTLEVE, REMARK 1 AUTH 3 A.J.MCCOY,N.W.MORIARTY,R.OEFFNER,R.J.READ,D.C.RICHARDSON, REMARK 1 AUTH 4 J.S.RICHARDSON,T.C.TERWILLIGER,P.H.ZWART REMARK 1 TITL PHENIX: A COMPREHENSIVE PYTHON-BASED SYSTEM FOR REMARK 1 TITL 2 MACROMOLECULAR STRUCTURE SOLUTION REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 66 213 2010 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 20124702 REMARK 1 DOI 10.1107/S0907444909052925 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.336 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 31305 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.264 REMARK 3 FREE R VALUE TEST SET COUNT : 1648 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9528 - 5.0295 0.97 2667 127 0.1584 0.1765 REMARK 3 2 5.0295 - 3.9951 0.99 2531 140 0.1341 0.1832 REMARK 3 3 3.9951 - 3.4909 1.00 2535 151 0.1572 0.1927 REMARK 3 4 3.4909 - 3.1721 1.00 2556 120 0.1781 0.2733 REMARK 3 5 3.1721 - 2.9450 1.00 2516 139 0.1931 0.2202 REMARK 3 6 2.9450 - 2.7715 1.00 2539 132 0.1949 0.2496 REMARK 3 7 2.7715 - 2.6328 1.00 2487 141 0.1872 0.2672 REMARK 3 8 2.6328 - 2.5182 1.00 2473 147 0.1866 0.2573 REMARK 3 9 2.5182 - 2.4213 1.00 2488 144 0.2015 0.2695 REMARK 3 10 2.4213 - 2.3378 0.98 2458 133 0.2187 0.3079 REMARK 3 11 2.3378 - 2.2647 0.95 2317 156 0.2197 0.2798 REMARK 3 12 2.2647 - 2.2000 0.84 2090 118 0.2336 0.2768 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.274 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.056 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.81 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5033 REMARK 3 ANGLE : 0.938 6805 REMARK 3 CHIRALITY : 0.054 740 REMARK 3 PLANARITY : 0.006 876 REMARK 3 DIHEDRAL : 20.832 3008 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 10:168) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9222 5.4652 40.2655 REMARK 3 T TENSOR REMARK 3 T11: 0.2867 T22: 0.4096 REMARK 3 T33: 0.3691 T12: -0.0385 REMARK 3 T13: 0.0146 T23: -0.1030 REMARK 3 L TENSOR REMARK 3 L11: 2.2962 L22: 2.4448 REMARK 3 L33: 3.6181 L12: -0.6320 REMARK 3 L13: -0.3178 L23: -0.1073 REMARK 3 S TENSOR REMARK 3 S11: -0.0814 S12: -0.4810 S13: 0.3159 REMARK 3 S21: 0.3152 S22: -0.0290 S23: 0.2087 REMARK 3 S31: -0.1486 S32: -0.2997 S33: 0.1004 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 169:190) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8044 -13.0022 5.9216 REMARK 3 T TENSOR REMARK 3 T11: 0.4693 T22: 0.5402 REMARK 3 T33: 0.4613 T12: 0.0295 REMARK 3 T13: 0.0124 T23: -0.0633 REMARK 3 L TENSOR REMARK 3 L11: 2.0762 L22: 7.7788 REMARK 3 L33: 2.0585 L12: -5.2994 REMARK 3 L13: -3.5152 L23: 5.7245 REMARK 3 S TENSOR REMARK 3 S11: 0.4369 S12: 1.2132 S13: -0.2642 REMARK 3 S21: -0.1888 S22: -0.0190 S23: -0.2158 REMARK 3 S31: 0.3285 S32: 0.5139 S33: -0.2393 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 191:315) REMARK 3 ORIGIN FOR THE GROUP (A): 30.5766 8.5624 15.6908 REMARK 3 T TENSOR REMARK 3 T11: 0.3632 T22: 0.2812 REMARK 3 T33: 0.4329 T12: 0.0001 REMARK 3 T13: 0.0668 T23: 0.0941 REMARK 3 L TENSOR REMARK 3 L11: 4.6083 L22: 1.6250 REMARK 3 L33: 6.5590 L12: 1.0951 REMARK 3 L13: 3.4618 L23: 2.0354 REMARK 3 S TENSOR REMARK 3 S11: -0.1463 S12: 0.1844 S13: 0.4116 REMARK 3 S21: -0.3052 S22: -0.0318 S23: -0.2164 REMARK 3 S31: -0.4332 S32: 0.4990 S33: 0.1716 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 10:168) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7408 -14.5954 35.6953 REMARK 3 T TENSOR REMARK 3 T11: 0.3556 T22: 0.2990 REMARK 3 T33: 0.3528 T12: -0.0518 REMARK 3 T13: 0.0254 T23: 0.0409 REMARK 3 L TENSOR REMARK 3 L11: 3.0102 L22: 2.2838 REMARK 3 L33: 3.2470 L12: -0.1068 REMARK 3 L13: 0.3922 L23: 0.1349 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: -0.3439 S13: -0.4649 REMARK 3 S21: 0.1931 S22: -0.0364 S23: 0.1127 REMARK 3 S31: 0.5539 S32: -0.1224 S33: 0.0248 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 169:190) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2411 16.6575 13.4271 REMARK 3 T TENSOR REMARK 3 T11: 0.4481 T22: 0.3745 REMARK 3 T33: 0.6473 T12: 0.0169 REMARK 3 T13: -0.0089 T23: 0.1326 REMARK 3 L TENSOR REMARK 3 L11: 2.0474 L22: 5.4194 REMARK 3 L33: 3.9061 L12: -5.2152 REMARK 3 L13: -0.3987 L23: 1.4831 REMARK 3 S TENSOR REMARK 3 S11: 0.2204 S12: 1.0531 S13: 1.3749 REMARK 3 S21: -0.3120 S22: -0.2147 S23: 0.2016 REMARK 3 S31: -0.5546 S32: -0.3569 S33: 0.0875 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 191:315) REMARK 3 ORIGIN FOR THE GROUP (A): 6.7738 -6.4344 10.7693 REMARK 3 T TENSOR REMARK 3 T11: 0.3295 T22: 0.3525 REMARK 3 T33: 0.3237 T12: 0.0323 REMARK 3 T13: -0.0701 T23: -0.1301 REMARK 3 L TENSOR REMARK 3 L11: 4.3893 L22: 2.9318 REMARK 3 L33: 4.3626 L12: 1.6535 REMARK 3 L13: -1.5574 L23: -1.6871 REMARK 3 S TENSOR REMARK 3 S11: -0.1149 S12: 0.1094 S13: -0.1766 REMARK 3 S21: -0.3990 S22: -0.0241 S23: 0.2631 REMARK 3 S31: 0.2669 S32: -0.5915 S33: 0.1357 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ATOMS WITH ZERO OCCUPANCY HAVE REMARK 3 UNOBSERVED DENSITY AND ARE MODELED WITH THE MOST PROBABLE REMARK 3 ROTAMER THAT DOES NOT CLASH WITH OTHER SURROUNDING ATOMS. REMARK 4 REMARK 4 5ZYR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1300007863. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31616 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.11900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.32800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.830 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CNS V1.2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: YELLOW ROD SHAPE WITH A TAPERED END REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 400, SODIUM ACETATE, GLYCEROL, PH REMARK 280 4.6, MICROBATCH, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.99600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.15000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.95000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 106.15000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.99600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.95000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -104.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 GLN A 3 REMARK 465 LEU A 4 REMARK 465 ASN A 5 REMARK 465 THR A 6 REMARK 465 ALA A 7 REMARK 465 ILE A 8 REMARK 465 VAL A 9 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 GLN B 3 REMARK 465 LEU B 4 REMARK 465 ASN B 5 REMARK 465 THR B 6 REMARK 465 ALA B 7 REMARK 465 ILE B 8 REMARK 465 VAL B 9 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 178 CG CD OE1 OE2 REMARK 480 GLU A 270 CG CD OE1 OE2 REMARK 480 GLU B 178 CB CG CD OE1 OE2 REMARK 480 THR B 231 CB OG1 CG2 REMARK 480 ALA B 232 N REMARK 480 GLU B 270 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 217 OD1 ASP B 151 2.03 REMARK 500 N LYS B 176 O HOH B 501 2.14 REMARK 500 O ACT A 402 O HOH A 501 2.17 REMARK 500 NZ LYS B 235 O GLN B 267 2.18 REMARK 500 ND2 ASN B 94 O HOH B 502 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND1 HIS A 150 OE2 GLU A 258 1455 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 132 142.96 -170.29 REMARK 500 HIS A 170 147.84 94.42 REMARK 500 HIS B 170 148.33 88.35 REMARK 500 ALA B 232 74.12 56.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 402 DBREF 5ZYR A 1 315 UNP Q6Q271 HPAHR_ACIBA 1 315 DBREF 5ZYR B 1 315 UNP Q6Q271 HPAHR_ACIBA 1 315 SEQRES 1 A 315 MET ASN GLN LEU ASN THR ALA ILE VAL GLU LYS GLU VAL SEQRES 2 A 315 ILE ASP PRO MET ALA PHE ARG ARG ALA LEU GLY ASN PHE SEQRES 3 A 315 ALA THR GLY VAL THR ILE MET THR ALA GLN THR SER SER SEQRES 4 A 315 GLY GLU ARG VAL GLY VAL THR ALA ASN SER PHE ASN SER SEQRES 5 A 315 VAL SER LEU ASP PRO ALA LEU VAL LEU TRP SER ILE ASP SEQRES 6 A 315 LYS LYS SER SER SER TYR ARG ILE PHE GLU GLU ALA THR SEQRES 7 A 315 HIS PHE GLY VAL ASN ILE LEU SER ALA ALA GLN ILE GLU SEQRES 8 A 315 LEU SER ASN ARG PHE ALA ARG ARG SER GLU ASP LYS PHE SEQRES 9 A 315 ALA ASN ILE GLU PHE ASP LEU GLY VAL GLY ASN ILE PRO SEQRES 10 A 315 LEU PHE LYS ASN CYS SER ALA ALA PHE GLU CYS GLU ARG SEQRES 11 A 315 TYR ASN ILE VAL GLU GLY GLY ASP HIS TRP ILE ILE ILE SEQRES 12 A 315 GLY ARG VAL VAL LYS PHE HIS ASP HIS GLY ARG SER PRO SEQRES 13 A 315 LEU LEU TYR HIS GLN GLY ALA TYR SER ALA VAL LEU PRO SEQRES 14 A 315 HIS PRO SER LEU ASN MET LYS SER GLU THR ALA GLU GLY SEQRES 15 A 315 VAL PHE PRO GLY ARG LEU TYR ASP ASN MET TYR TYR LEU SEQRES 16 A 315 LEU THR GLN ALA VAL ARG ALA TYR GLN ASN ASP TYR GLN SEQRES 17 A 315 PRO LYS GLN LEU ALA SER GLY PHE ARG THR SER GLU ALA SEQRES 18 A 315 ARG LEU LEU LEU VAL LEU GLU SER LYS THR ALA SER SER SEQRES 19 A 315 LYS CYS ASP LEU GLN ARG GLU VAL ALA MET PRO ILE ARG SEQRES 20 A 315 GLU ILE GLU GLU ALA THR LYS ILE LEU SER GLU LYS GLY SEQRES 21 A 315 LEU LEU ILE ASP ASN GLY GLN HIS TYR GLU LEU THR GLU SEQRES 22 A 315 GLN GLY ASN ALA CYS ALA HIS MET LEU TYR LYS ILE ALA SEQRES 23 A 315 GLU SER HIS GLN GLU GLU VAL PHE ALA LYS TYR THR VAL SEQRES 24 A 315 ASP GLU ARG LYS LEU PHE LYS ASN MET LEU LYS ASP LEU SEQRES 25 A 315 ILE GLY ILE SEQRES 1 B 315 MET ASN GLN LEU ASN THR ALA ILE VAL GLU LYS GLU VAL SEQRES 2 B 315 ILE ASP PRO MET ALA PHE ARG ARG ALA LEU GLY ASN PHE SEQRES 3 B 315 ALA THR GLY VAL THR ILE MET THR ALA GLN THR SER SER SEQRES 4 B 315 GLY GLU ARG VAL GLY VAL THR ALA ASN SER PHE ASN SER SEQRES 5 B 315 VAL SER LEU ASP PRO ALA LEU VAL LEU TRP SER ILE ASP SEQRES 6 B 315 LYS LYS SER SER SER TYR ARG ILE PHE GLU GLU ALA THR SEQRES 7 B 315 HIS PHE GLY VAL ASN ILE LEU SER ALA ALA GLN ILE GLU SEQRES 8 B 315 LEU SER ASN ARG PHE ALA ARG ARG SER GLU ASP LYS PHE SEQRES 9 B 315 ALA ASN ILE GLU PHE ASP LEU GLY VAL GLY ASN ILE PRO SEQRES 10 B 315 LEU PHE LYS ASN CYS SER ALA ALA PHE GLU CYS GLU ARG SEQRES 11 B 315 TYR ASN ILE VAL GLU GLY GLY ASP HIS TRP ILE ILE ILE SEQRES 12 B 315 GLY ARG VAL VAL LYS PHE HIS ASP HIS GLY ARG SER PRO SEQRES 13 B 315 LEU LEU TYR HIS GLN GLY ALA TYR SER ALA VAL LEU PRO SEQRES 14 B 315 HIS PRO SER LEU ASN MET LYS SER GLU THR ALA GLU GLY SEQRES 15 B 315 VAL PHE PRO GLY ARG LEU TYR ASP ASN MET TYR TYR LEU SEQRES 16 B 315 LEU THR GLN ALA VAL ARG ALA TYR GLN ASN ASP TYR GLN SEQRES 17 B 315 PRO LYS GLN LEU ALA SER GLY PHE ARG THR SER GLU ALA SEQRES 18 B 315 ARG LEU LEU LEU VAL LEU GLU SER LYS THR ALA SER SER SEQRES 19 B 315 LYS CYS ASP LEU GLN ARG GLU VAL ALA MET PRO ILE ARG SEQRES 20 B 315 GLU ILE GLU GLU ALA THR LYS ILE LEU SER GLU LYS GLY SEQRES 21 B 315 LEU LEU ILE ASP ASN GLY GLN HIS TYR GLU LEU THR GLU SEQRES 22 B 315 GLN GLY ASN ALA CYS ALA HIS MET LEU TYR LYS ILE ALA SEQRES 23 B 315 GLU SER HIS GLN GLU GLU VAL PHE ALA LYS TYR THR VAL SEQRES 24 B 315 ASP GLU ARG LYS LEU PHE LYS ASN MET LEU LYS ASP LEU SEQRES 25 B 315 ILE GLY ILE HET FMN A 401 31 HET ACT A 402 7 HET FMN B 401 31 HET ACT B 402 7 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM ACT ACETATE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 7 HOH *127(H2 O) HELIX 1 AA1 ASP A 15 GLY A 24 1 10 HELIX 2 AA2 SER A 70 ALA A 77 1 8 HELIX 3 AA3 SER A 86 ALA A 88 5 3 HELIX 4 AA4 GLN A 89 PHE A 96 1 8 HELIX 5 AA5 VAL A 113 ASN A 115 5 3 HELIX 6 AA6 ALA A 180 PHE A 184 5 5 HELIX 7 AA7 GLY A 186 ASP A 190 5 5 HELIX 8 AA8 ASN A 191 SER A 214 1 24 HELIX 9 AA9 ARG A 217 GLU A 228 1 12 HELIX 10 AB1 SER A 234 ALA A 243 1 10 HELIX 11 AB2 PRO A 245 LYS A 259 1 15 HELIX 12 AB3 THR A 272 PHE A 294 1 23 HELIX 13 AB4 ALA A 295 TYR A 297 5 3 HELIX 14 AB5 THR A 298 GLY A 314 1 17 HELIX 15 AB6 ASP B 15 GLY B 24 1 10 HELIX 16 AB7 SER B 70 ALA B 77 1 8 HELIX 17 AB8 GLN B 89 PHE B 96 1 8 HELIX 18 AB9 VAL B 113 ASN B 115 5 3 HELIX 19 AC1 ALA B 180 PHE B 184 5 5 HELIX 20 AC2 GLY B 186 ASP B 190 5 5 HELIX 21 AC3 ASN B 191 SER B 214 1 24 HELIX 22 AC4 ARG B 217 GLU B 228 1 12 HELIX 23 AC5 SER B 234 ALA B 243 1 10 HELIX 24 AC6 PRO B 245 LYS B 259 1 15 HELIX 25 AC7 THR B 272 PHE B 294 1 23 HELIX 26 AC8 THR B 298 GLY B 314 1 17 SHEET 1 AA1 6 THR A 28 GLY A 29 0 SHEET 2 AA1 6 LEU A 158 HIS A 160 -1 O TYR A 159 N THR A 28 SHEET 3 AA1 6 ALA A 163 LEU A 168 -1 O SER A 165 N LEU A 158 SHEET 4 AA1 6 ALA B 163 LEU B 168 -1 O LEU B 168 N ALA A 166 SHEET 5 AA1 6 LEU B 158 HIS B 160 -1 N HIS B 160 O ALA B 163 SHEET 6 AA1 6 THR B 28 GLY B 29 -1 N THR B 28 O TYR B 159 SHEET 1 AA2 7 ARG A 42 ALA A 47 0 SHEET 2 AA2 7 THR A 31 GLN A 36 -1 N ALA A 35 O VAL A 43 SHEET 3 AA2 7 HIS A 79 ILE A 84 -1 O GLY A 81 N THR A 34 SHEET 4 AA2 7 ALA A 124 GLY A 136 -1 O ALA A 124 N ILE A 84 SHEET 5 AA2 7 HIS A 139 ASP A 151 -1 O ILE A 143 N ASN A 132 SHEET 6 AA2 7 LEU A 59 ASP A 65 -1 N ILE A 64 O TRP A 140 SHEET 7 AA2 7 ASN A 51 SER A 54 -1 N ASN A 51 O LEU A 61 SHEET 1 AA3 2 PHE A 109 LEU A 111 0 SHEET 2 AA3 2 PRO A 117 PHE A 119 -1 O LEU A 118 N ASP A 110 SHEET 1 AA4 2 LEU A 262 ASP A 264 0 SHEET 2 AA4 2 TYR A 269 LEU A 271 -1 O GLU A 270 N ILE A 263 SHEET 1 AA5 7 ARG B 42 ALA B 47 0 SHEET 2 AA5 7 THR B 31 GLN B 36 -1 N MET B 33 O VAL B 45 SHEET 3 AA5 7 HIS B 79 ILE B 84 -1 O GLY B 81 N THR B 34 SHEET 4 AA5 7 ALA B 124 GLY B 136 -1 O ALA B 124 N ILE B 84 SHEET 5 AA5 7 HIS B 139 ASP B 151 -1 O ILE B 141 N VAL B 134 SHEET 6 AA5 7 LEU B 59 ASP B 65 -1 N TRP B 62 O ILE B 142 SHEET 7 AA5 7 ASN B 51 SER B 54 -1 N VAL B 53 O LEU B 59 SHEET 1 AA6 2 PHE B 109 LEU B 111 0 SHEET 2 AA6 2 PRO B 117 PHE B 119 -1 O LEU B 118 N ASP B 110 SHEET 1 AA7 2 LEU B 262 ASN B 265 0 SHEET 2 AA7 2 HIS B 268 LEU B 271 -1 O GLU B 270 N ILE B 263 CISPEP 1 ASP A 56 PRO A 57 0 -2.26 CISPEP 2 ASP B 56 PRO B 57 0 -3.33 SITE 1 AC1 18 VAL A 45 THR A 46 ALA A 47 ASN A 48 SITE 2 AC1 18 SER A 49 SER A 63 ILE A 64 ASP A 65 SITE 3 AC1 18 SER A 68 SER A 69 SER A 70 PHE A 96 SITE 4 AC1 18 ALA A 97 ARG A 99 LYS A 103 PRO A 245 SITE 5 AC1 18 ARG A 247 HOH A 540 SITE 1 AC2 7 THR A 218 ARG A 222 HOH A 501 HOH A 514 SITE 2 AC2 7 HOH A 520 PRO B 169 HIS B 170 SITE 1 AC3 18 VAL B 45 THR B 46 ALA B 47 ASN B 48 SITE 2 AC3 18 SER B 49 SER B 63 ILE B 64 ASP B 65 SITE 3 AC3 18 SER B 68 SER B 69 SER B 70 PHE B 96 SITE 4 AC3 18 ALA B 97 ARG B 99 LYS B 103 PRO B 245 SITE 5 AC3 18 ARG B 247 HOH B 524 SITE 1 AC4 5 PRO A 169 HIS A 170 THR B 218 ARG B 222 SITE 2 AC4 5 HOH B 503 CRYST1 47.992 59.900 212.300 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020837 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016694 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004710 0.00000