HEADER GENE REGULATION 30-MAY-18 5ZZ6 TITLE REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX COMPND MOL_ID: 1; COMPND 2 MOLECULE: REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA MSB8; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: MSB8; SOURCE 5 GENE: REX1, TM_0169; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS REDOX SENSING, TRANSCRIPTION FACTOR, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR Y.W.PARK,Y.Y.JANG,H.K.JOO,J.Y.LEE REVDAT 2 27-MAR-24 5ZZ6 1 REMARK REVDAT 1 07-NOV-18 5ZZ6 0 JRNL AUTH Y.W.PARK,Y.Y.JANG,H.K.JOO,J.Y.LEE JRNL TITL STRUCTURAL ANALYSIS OF REDOX-SENSING TRANSCRIPTIONAL JRNL TITL 2 REPRESSOR REX FROM THERMOTOGA MARITIMA JRNL REF SCI REP V. 8 13244 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 30185822 JRNL DOI 10.1038/S41598-018-31676-Z REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 41098 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2073 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9202 - 5.4157 0.99 2623 158 0.1736 0.2280 REMARK 3 2 5.4157 - 4.3027 0.98 2610 142 0.1681 0.1989 REMARK 3 3 4.3027 - 3.7600 0.98 2565 119 0.1833 0.2262 REMARK 3 4 3.7600 - 3.4167 0.99 2589 152 0.2090 0.2301 REMARK 3 5 3.4167 - 3.1721 0.99 2564 151 0.2294 0.3122 REMARK 3 6 3.1721 - 2.9853 1.00 2610 124 0.2437 0.2791 REMARK 3 7 2.9853 - 2.8359 1.00 2641 134 0.2503 0.3385 REMARK 3 8 2.8359 - 2.7125 1.00 2604 138 0.2511 0.3135 REMARK 3 9 2.7125 - 2.6082 1.00 2618 136 0.2516 0.3173 REMARK 3 10 2.6082 - 2.5182 1.00 2594 159 0.2505 0.3134 REMARK 3 11 2.5182 - 2.4395 1.00 2591 119 0.2495 0.2710 REMARK 3 12 2.4395 - 2.3698 1.00 2627 119 0.2461 0.2927 REMARK 3 13 2.3698 - 2.3075 0.99 2600 126 0.2570 0.3115 REMARK 3 14 2.3075 - 2.2512 1.00 2604 140 0.2803 0.3199 REMARK 3 15 2.2512 - 2.2000 1.00 2585 156 0.2939 0.3905 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 6080 REMARK 3 ANGLE : 1.665 8285 REMARK 3 CHIRALITY : 0.044 990 REMARK 3 PLANARITY : 0.004 1045 REMARK 3 DIHEDRAL : 14.431 2097 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -11.1851 -11.3297 -21.3271 REMARK 3 T TENSOR REMARK 3 T11: 0.4171 T22: 0.4053 REMARK 3 T33: 0.3812 T12: -0.0056 REMARK 3 T13: -0.0026 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 0.6648 L22: 0.3575 REMARK 3 L33: 0.5854 L12: -0.2066 REMARK 3 L13: 0.1532 L23: -0.3058 REMARK 3 S TENSOR REMARK 3 S11: 0.0428 S12: 0.1314 S13: 0.0007 REMARK 3 S21: -0.0117 S22: -0.0430 S23: -0.0443 REMARK 3 S31: 0.0031 S32: 0.0154 S33: -0.0064 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZZ6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1300007903. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97940 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41917 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM CHLORIDE, PEG 3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.72700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLU A 3 REMARK 465 LYS A 4 REMARK 465 ILE A 5 REMARK 465 PRO A 6 REMARK 465 LYS A 7 REMARK 465 PRO A 8 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLU B 3 REMARK 465 SER B 208 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 GLU C 3 REMARK 465 ARG C 60 REMARK 465 GLY C 61 REMARK 465 VAL C 62 REMARK 465 SER C 208 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 GLU D 3 REMARK 465 LYS D 4 REMARK 465 ILE D 5 REMARK 465 PRO D 6 REMARK 465 LYS D 7 REMARK 465 PRO D 8 REMARK 465 VAL D 31 REMARK 465 SER D 32 REMARK 465 ARG D 39 REMARK 465 LEU D 40 REMARK 465 ASP D 41 REMARK 465 LEU D 42 REMARK 465 LYS D 43 REMARK 465 GLY D 61 REMARK 465 VAL D 62 REMARK 465 GLY D 63 REMARK 465 TYR D 64 REMARK 465 SER D 208 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 11 CG CD CE NZ REMARK 470 ARG A 22 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 25 CG OD1 OD2 REMARK 470 ARG A 38 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 39 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 41 CG OD1 OD2 REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 SER A 45 OG REMARK 470 ARG A 48 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 49 CG CD CE NZ REMARK 470 LYS A 80 CG CD CE NZ REMARK 470 GLU A 82 CG CD OE1 OE2 REMARK 470 THR A 101 OG1 CG2 REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 ARG A 109 CG CD NE CZ NH1 NH2 REMARK 470 PRO A 118 CG CD REMARK 470 SER A 119 OG REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 VAL A 134 CG1 CG2 REMARK 470 GLU A 136 CG CD OE1 OE2 REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 GLU A 143 CG CD OE1 OE2 REMARK 470 GLU A 156 CG CD OE1 OE2 REMARK 470 GLU A 160 CG CD OE1 OE2 REMARK 470 GLU A 163 CG CD OE1 OE2 REMARK 470 LYS A 167 CG CD CE NZ REMARK 470 LYS A 171 CG CD CE NZ REMARK 470 VAL A 179 CG1 CG2 REMARK 470 LYS A 180 CG CD CE NZ REMARK 470 LYS A 182 CG CD CE NZ REMARK 470 SER A 184 OG REMARK 470 LYS B 4 CG CD CE NZ REMARK 470 LYS B 11 CG CD CE NZ REMARK 470 LYS B 43 CG CD CE NZ REMARK 470 GLU B 67 CG CD OE1 OE2 REMARK 470 VAL B 102 CG1 CG2 REMARK 470 LYS B 104 CG CD CE NZ REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 470 LYS B 106 CG CD CE NZ REMARK 470 GLU B 136 CG CD OE1 OE2 REMARK 470 GLU B 143 CG CD OE1 OE2 REMARK 470 LYS B 167 CG CD CE NZ REMARK 470 LYS B 180 CG CD CE NZ REMARK 470 ARG B 206 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 4 CG CD CE NZ REMARK 470 ILE C 5 CG1 CG2 CD1 REMARK 470 LYS C 7 CG CD CE NZ REMARK 470 SER C 10 OG REMARK 470 ARG C 22 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 24 CG CD1 CD2 REMARK 470 GLU C 26 CG CD OE1 OE2 REMARK 470 VAL C 28 CG1 CG2 REMARK 470 GLU C 29 CG CD OE1 OE2 REMARK 470 ARG C 39 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 67 CG CD OE1 OE2 REMARK 470 GLU C 75 CG CD OE1 OE2 REMARK 470 LYS C 81 CG CD CE NZ REMARK 470 THR C 101 OG1 CG2 REMARK 470 VAL C 102 CG1 CG2 REMARK 470 LYS C 104 CG CD CE NZ REMARK 470 GLU C 105 CG CD OE1 OE2 REMARK 470 LYS C 106 CG CD CE NZ REMARK 470 ARG C 109 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 123 CG CD CE NZ REMARK 470 LYS C 167 CG CD CE NZ REMARK 470 LYS C 171 CG CD CE NZ REMARK 470 LYS C 180 CG CD CE NZ REMARK 470 LYS C 182 CG CD CE NZ REMARK 470 ASN C 207 CG OD1 ND2 REMARK 470 LYS D 11 CG CD CE NZ REMARK 470 LEU D 23 CG CD1 CD2 REMARK 470 GLU D 26 CG CD OE1 OE2 REMARK 470 GLU D 29 CG CD OE1 OE2 REMARK 470 VAL D 30 CG1 CG2 REMARK 470 SER D 33 OG REMARK 470 GLU D 34 CG CD OE1 OE2 REMARK 470 GLU D 35 CG CD OE1 OE2 REMARK 470 LEU D 36 CG CD1 CD2 REMARK 470 ARG D 38 CG CD NE CZ NH1 NH2 REMARK 470 SER D 45 OG REMARK 470 GLN D 46 CG CD OE1 NE2 REMARK 470 ILE D 47 CG1 CG2 CD1 REMARK 470 LYS D 49 CG CD CE NZ REMARK 470 LEU D 51 CG CD1 CD2 REMARK 470 SER D 52 OG REMARK 470 GLU D 56 CG CD OE1 OE2 REMARK 470 PHE D 57 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS D 59 CG CD CE NZ REMARK 470 ARG D 60 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 75 CG CD OE1 OE2 REMARK 470 LYS D 80 CG CD CE NZ REMARK 470 LYS D 167 CG CD CE NZ REMARK 470 LYS D 180 CG CD CE NZ REMARK 470 ASN D 207 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 90 32.62 -96.36 REMARK 500 ALA B 90 53.12 -105.41 REMARK 500 ALA D 90 44.36 -93.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 418 DISTANCE = 5.94 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD D 301 DBREF 5ZZ6 A 1 208 UNP Q9WY16 REX1_THEMA 1 208 DBREF 5ZZ6 B 1 208 UNP Q9WY16 REX1_THEMA 1 208 DBREF 5ZZ6 C 1 208 UNP Q9WY16 REX1_THEMA 1 208 DBREF 5ZZ6 D 1 208 UNP Q9WY16 REX1_THEMA 1 208 SEQRES 1 A 208 MET ALA GLU LYS ILE PRO LYS PRO VAL SER LYS ARG LEU SEQRES 2 A 208 VAL SER TYR TYR MET CYS LEU GLU ARG LEU LEU ASP GLU SEQRES 3 A 208 GLY VAL GLU VAL VAL SER SER GLU GLU LEU ALA ARG ARG SEQRES 4 A 208 LEU ASP LEU LYS ALA SER GLN ILE ARG LYS ASP LEU SER SEQRES 5 A 208 TYR PHE GLY GLU PHE GLY LYS ARG GLY VAL GLY TYR ASN SEQRES 6 A 208 VAL GLU HIS LEU TYR ASP ALA ILE GLY GLU ILE LEU GLY SEQRES 7 A 208 VAL LYS LYS GLU TRP LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 8 A 208 ASN ILE GLY ARG ALA VAL ALA ASN TYR THR VAL MET LYS SEQRES 9 A 208 GLU LYS GLY PHE ARG ILE ILE GLY ILE PHE ASP SER ASP SEQRES 10 A 208 PRO SER LYS ILE GLY LYS GLU ALA ALA PRO GLY LEU THR SEQRES 11 A 208 VAL SER ASP VAL SER GLU LEU GLU LYS PHE VAL GLU GLU SEQRES 12 A 208 HIS GLY VAL GLU ILE GLY VAL ILE ALA VAL PRO ALA GLU SEQRES 13 A 208 HIS ALA GLN GLU ILE ALA GLU ARG LEU GLU LYS ALA GLY SEQRES 14 A 208 ILE LYS GLY ILE LEU ASN PHE ALA PRO VAL LYS ILE LYS SEQRES 15 A 208 VAL SER VAL PRO VAL GLU ASN ILE ASP ILE THR ALA SER SEQRES 16 A 208 LEU ARG VAL LEU THR PHE GLU ILE VAL ARG ARG ASN SER SEQRES 1 B 208 MET ALA GLU LYS ILE PRO LYS PRO VAL SER LYS ARG LEU SEQRES 2 B 208 VAL SER TYR TYR MET CYS LEU GLU ARG LEU LEU ASP GLU SEQRES 3 B 208 GLY VAL GLU VAL VAL SER SER GLU GLU LEU ALA ARG ARG SEQRES 4 B 208 LEU ASP LEU LYS ALA SER GLN ILE ARG LYS ASP LEU SER SEQRES 5 B 208 TYR PHE GLY GLU PHE GLY LYS ARG GLY VAL GLY TYR ASN SEQRES 6 B 208 VAL GLU HIS LEU TYR ASP ALA ILE GLY GLU ILE LEU GLY SEQRES 7 B 208 VAL LYS LYS GLU TRP LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 8 B 208 ASN ILE GLY ARG ALA VAL ALA ASN TYR THR VAL MET LYS SEQRES 9 B 208 GLU LYS GLY PHE ARG ILE ILE GLY ILE PHE ASP SER ASP SEQRES 10 B 208 PRO SER LYS ILE GLY LYS GLU ALA ALA PRO GLY LEU THR SEQRES 11 B 208 VAL SER ASP VAL SER GLU LEU GLU LYS PHE VAL GLU GLU SEQRES 12 B 208 HIS GLY VAL GLU ILE GLY VAL ILE ALA VAL PRO ALA GLU SEQRES 13 B 208 HIS ALA GLN GLU ILE ALA GLU ARG LEU GLU LYS ALA GLY SEQRES 14 B 208 ILE LYS GLY ILE LEU ASN PHE ALA PRO VAL LYS ILE LYS SEQRES 15 B 208 VAL SER VAL PRO VAL GLU ASN ILE ASP ILE THR ALA SER SEQRES 16 B 208 LEU ARG VAL LEU THR PHE GLU ILE VAL ARG ARG ASN SER SEQRES 1 C 208 MET ALA GLU LYS ILE PRO LYS PRO VAL SER LYS ARG LEU SEQRES 2 C 208 VAL SER TYR TYR MET CYS LEU GLU ARG LEU LEU ASP GLU SEQRES 3 C 208 GLY VAL GLU VAL VAL SER SER GLU GLU LEU ALA ARG ARG SEQRES 4 C 208 LEU ASP LEU LYS ALA SER GLN ILE ARG LYS ASP LEU SER SEQRES 5 C 208 TYR PHE GLY GLU PHE GLY LYS ARG GLY VAL GLY TYR ASN SEQRES 6 C 208 VAL GLU HIS LEU TYR ASP ALA ILE GLY GLU ILE LEU GLY SEQRES 7 C 208 VAL LYS LYS GLU TRP LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 8 C 208 ASN ILE GLY ARG ALA VAL ALA ASN TYR THR VAL MET LYS SEQRES 9 C 208 GLU LYS GLY PHE ARG ILE ILE GLY ILE PHE ASP SER ASP SEQRES 10 C 208 PRO SER LYS ILE GLY LYS GLU ALA ALA PRO GLY LEU THR SEQRES 11 C 208 VAL SER ASP VAL SER GLU LEU GLU LYS PHE VAL GLU GLU SEQRES 12 C 208 HIS GLY VAL GLU ILE GLY VAL ILE ALA VAL PRO ALA GLU SEQRES 13 C 208 HIS ALA GLN GLU ILE ALA GLU ARG LEU GLU LYS ALA GLY SEQRES 14 C 208 ILE LYS GLY ILE LEU ASN PHE ALA PRO VAL LYS ILE LYS SEQRES 15 C 208 VAL SER VAL PRO VAL GLU ASN ILE ASP ILE THR ALA SER SEQRES 16 C 208 LEU ARG VAL LEU THR PHE GLU ILE VAL ARG ARG ASN SER SEQRES 1 D 208 MET ALA GLU LYS ILE PRO LYS PRO VAL SER LYS ARG LEU SEQRES 2 D 208 VAL SER TYR TYR MET CYS LEU GLU ARG LEU LEU ASP GLU SEQRES 3 D 208 GLY VAL GLU VAL VAL SER SER GLU GLU LEU ALA ARG ARG SEQRES 4 D 208 LEU ASP LEU LYS ALA SER GLN ILE ARG LYS ASP LEU SER SEQRES 5 D 208 TYR PHE GLY GLU PHE GLY LYS ARG GLY VAL GLY TYR ASN SEQRES 6 D 208 VAL GLU HIS LEU TYR ASP ALA ILE GLY GLU ILE LEU GLY SEQRES 7 D 208 VAL LYS LYS GLU TRP LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 8 D 208 ASN ILE GLY ARG ALA VAL ALA ASN TYR THR VAL MET LYS SEQRES 9 D 208 GLU LYS GLY PHE ARG ILE ILE GLY ILE PHE ASP SER ASP SEQRES 10 D 208 PRO SER LYS ILE GLY LYS GLU ALA ALA PRO GLY LEU THR SEQRES 11 D 208 VAL SER ASP VAL SER GLU LEU GLU LYS PHE VAL GLU GLU SEQRES 12 D 208 HIS GLY VAL GLU ILE GLY VAL ILE ALA VAL PRO ALA GLU SEQRES 13 D 208 HIS ALA GLN GLU ILE ALA GLU ARG LEU GLU LYS ALA GLY SEQRES 14 D 208 ILE LYS GLY ILE LEU ASN PHE ALA PRO VAL LYS ILE LYS SEQRES 15 D 208 VAL SER VAL PRO VAL GLU ASN ILE ASP ILE THR ALA SER SEQRES 16 D 208 LEU ARG VAL LEU THR PHE GLU ILE VAL ARG ARG ASN SER HET NAD A 301 44 HET NAD B 301 44 HET ADP C 301 27 HET NAD D 301 44 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 5 NAD 3(C21 H27 N7 O14 P2) FORMUL 7 ADP C10 H15 N5 O10 P2 FORMUL 9 HOH *83(H2 O) HELIX 1 AA1 VAL A 9 GLY A 27 1 19 HELIX 2 AA2 SER A 32 ASP A 41 1 10 HELIX 3 AA3 LYS A 43 SER A 52 1 10 HELIX 4 AA4 TYR A 53 PHE A 57 5 5 HELIX 5 AA5 VAL A 66 GLY A 78 1 13 HELIX 6 AA6 GLY A 91 ASN A 99 1 9 HELIX 7 AA7 TYR A 100 LYS A 104 5 5 HELIX 8 AA8 GLU A 136 GLY A 145 1 10 HELIX 9 AA9 PRO A 154 ALA A 168 1 15 HELIX 10 AB1 ASP A 191 ASN A 207 1 17 HELIX 11 AB2 VAL B 9 GLY B 27 1 19 HELIX 12 AB3 SER B 32 ASP B 41 1 10 HELIX 13 AB4 LYS B 43 SER B 52 1 10 HELIX 14 AB5 TYR B 53 PHE B 57 5 5 HELIX 15 AB6 VAL B 66 LEU B 77 1 12 HELIX 16 AB7 GLY B 91 ASN B 99 1 9 HELIX 17 AB8 VAL B 102 GLY B 107 1 6 HELIX 18 AB9 GLU B 136 GLY B 145 1 10 HELIX 19 AC1 PRO B 154 GLU B 156 5 3 HELIX 20 AC2 HIS B 157 ALA B 168 1 12 HELIX 21 AC3 ASP B 191 ASN B 207 1 17 HELIX 22 AC4 PRO C 6 GLY C 27 1 22 HELIX 23 AC5 SER C 32 ASP C 41 1 10 HELIX 24 AC6 LYS C 43 PHE C 54 1 12 HELIX 25 AC7 VAL C 66 GLY C 78 1 13 HELIX 26 AC8 GLY C 91 ASN C 99 1 9 HELIX 27 AC9 THR C 101 GLY C 107 1 7 HELIX 28 AD1 GLU C 136 GLY C 145 1 10 HELIX 29 AD2 PRO C 154 GLU C 156 5 3 HELIX 30 AD3 HIS C 157 ALA C 168 1 12 HELIX 31 AD4 ASP C 191 ASN C 207 1 17 HELIX 32 AD5 SER D 10 GLY D 27 1 18 HELIX 33 AD6 GLU D 34 ARG D 38 1 5 HELIX 34 AD7 SER D 45 SER D 52 1 8 HELIX 35 AD8 TYR D 53 GLY D 55 5 3 HELIX 36 AD9 VAL D 66 LEU D 77 1 12 HELIX 37 AE1 GLY D 91 ASN D 99 1 9 HELIX 38 AE2 TYR D 100 LYS D 106 1 7 HELIX 39 AE3 GLU D 136 GLY D 145 1 10 HELIX 40 AE4 PRO D 154 GLY D 169 1 16 HELIX 41 AE5 ASP D 191 ASN D 207 1 17 SHEET 1 AA1 3 VAL A 30 VAL A 31 0 SHEET 2 AA1 3 GLY A 63 ASN A 65 -1 O TYR A 64 N VAL A 31 SHEET 3 AA1 3 LYS A 59 ARG A 60 -1 N ARG A 60 O GLY A 63 SHEET 1 AA2 7 GLU A 124 ALA A 126 0 SHEET 2 AA2 7 LEU A 129 ASP A 133 -1 O LEU A 129 N ALA A 126 SHEET 3 AA2 7 PHE A 108 ASP A 115 1 N ILE A 113 O SER A 132 SHEET 4 AA2 7 TRP A 83 VAL A 88 1 N TRP A 83 O ARG A 109 SHEET 5 AA2 7 ILE A 148 ILE A 151 1 O VAL A 150 N VAL A 86 SHEET 6 AA2 7 GLY A 172 ASN A 175 1 O LEU A 174 N GLY A 149 SHEET 7 AA2 7 VAL A 187 ASN A 189 1 O GLU A 188 N ILE A 173 SHEET 1 AA3 3 VAL B 30 VAL B 31 0 SHEET 2 AA3 3 GLY B 63 ASN B 65 -1 O TYR B 64 N VAL B 31 SHEET 3 AA3 3 LYS B 59 ARG B 60 -1 N ARG B 60 O GLY B 63 SHEET 1 AA4 7 GLU B 124 ALA B 126 0 SHEET 2 AA4 7 LEU B 129 ASP B 133 -1 O LEU B 129 N ALA B 126 SHEET 3 AA4 7 PHE B 108 ASP B 115 1 N ILE B 113 O SER B 132 SHEET 4 AA4 7 TRP B 83 VAL B 88 1 N VAL B 87 O PHE B 114 SHEET 5 AA4 7 ILE B 148 ILE B 151 1 O VAL B 150 N VAL B 86 SHEET 6 AA4 7 GLY B 172 ASN B 175 1 O LEU B 174 N ILE B 151 SHEET 7 AA4 7 VAL B 187 ASN B 189 1 O GLU B 188 N ASN B 175 SHEET 1 AA5 2 VAL C 30 VAL C 31 0 SHEET 2 AA5 2 TYR C 64 ASN C 65 -1 O TYR C 64 N VAL C 31 SHEET 1 AA6 7 GLU C 124 ALA C 126 0 SHEET 2 AA6 7 LEU C 129 ASP C 133 -1 O LEU C 129 N ALA C 126 SHEET 3 AA6 7 PHE C 108 ASP C 115 1 N ILE C 113 O SER C 132 SHEET 4 AA6 7 TRP C 83 VAL C 88 1 N LEU C 85 O ARG C 109 SHEET 5 AA6 7 ILE C 148 ILE C 151 1 O VAL C 150 N VAL C 88 SHEET 6 AA6 7 GLY C 172 ASN C 175 1 O LEU C 174 N ILE C 151 SHEET 7 AA6 7 VAL C 187 ASN C 189 1 O GLU C 188 N ASN C 175 SHEET 1 AA7 7 GLU D 124 ALA D 126 0 SHEET 2 AA7 7 LEU D 129 ASP D 133 -1 O LEU D 129 N ALA D 126 SHEET 3 AA7 7 PHE D 108 ASP D 115 1 N ILE D 113 O SER D 132 SHEET 4 AA7 7 TRP D 83 VAL D 88 1 N LEU D 85 O ARG D 109 SHEET 5 AA7 7 ILE D 148 ILE D 151 1 O VAL D 150 N VAL D 88 SHEET 6 AA7 7 GLY D 172 ASN D 175 1 O LEU D 174 N ILE D 151 SHEET 7 AA7 7 VAL D 187 ASN D 189 1 O GLU D 188 N ASN D 175 SITE 1 AC1 19 GLY A 91 ASN A 92 ILE A 93 ASP A 115 SITE 2 AC1 19 SER A 116 LYS A 120 ALA A 152 VAL A 153 SITE 3 AC1 19 PRO A 154 HIS A 157 ILE A 161 PHE A 176 SITE 4 AC1 19 ALA A 177 PRO A 178 ILE A 192 THR A 193 SITE 5 AC1 19 ALA B 96 VAL B 97 TYR B 100 SITE 1 AC2 23 ALA A 96 VAL A 97 TYR A 100 VAL B 88 SITE 2 AC2 23 GLY B 89 ALA B 90 GLY B 91 ASN B 92 SITE 3 AC2 23 ILE B 93 ASP B 115 SER B 116 ASP B 117 SITE 4 AC2 23 LYS B 120 ALA B 152 VAL B 153 PRO B 154 SITE 5 AC2 23 HIS B 157 ILE B 161 PHE B 176 ALA B 177 SITE 6 AC2 23 PRO B 178 ILE B 192 HOH B 410 SITE 1 AC3 11 GLY C 91 ASN C 92 ILE C 93 ASP C 115 SITE 2 AC3 11 SER C 116 ASP C 117 LYS C 120 VAL C 153 SITE 3 AC3 11 PRO C 154 HIS C 157 TYR D 100 SITE 1 AC4 21 ALA C 96 TYR C 100 GLY D 89 GLY D 91 SITE 2 AC4 21 ASN D 92 ILE D 93 ASP D 115 SER D 116 SITE 3 AC4 21 ASP D 117 LYS D 120 VAL D 134 ALA D 152 SITE 4 AC4 21 VAL D 153 PRO D 154 ALA D 155 HIS D 157 SITE 5 AC4 21 PHE D 176 ALA D 177 PRO D 178 ILE D 192 SITE 6 AC4 21 HOH D 413 CRYST1 53.512 89.454 87.025 90.00 96.76 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018687 0.000000 0.002216 0.00000 SCALE2 0.000000 0.011179 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011571 0.00000