data_5ZZK # _entry.id 5ZZK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5ZZK pdb_00005zzk 10.2210/pdb5zzk/pdb WWPDB D_1300007295 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 3VMQ _pdbx_database_related.content_type re-refinement # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5ZZK _pdbx_database_status.recvd_initial_deposition_date 2018-06-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Wybenga, G.G.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biorxiv _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2692-8205 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'A Con Artist: Phenylphenoxybenzamide is not a Glycosyltransferase Inhibitor' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1101/292912 _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wybenga, G.G.' 1 ? primary 'Wu, W.S.' 2 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5ZZK _cell.details ? _cell.formula_units_Z ? _cell.length_a 153.880 _cell.length_a_esd ? _cell.length_b 39.640 _cell.length_b_esd ? _cell.length_c 55.830 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZZK _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Monofunctional glycosyltransferase' 28425.287 1 2.4.1.129 ? ? ? 2 water nat water 18.015 6 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MGT,Peptidoglycan TGase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMQPVGKPPKKKKSKRILLKILLTILIIIALFIGIMYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDER FYNHHGFDLKGTTRALFSTISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQYNKNEILSFYLNNIYFG DNQYTLEGAANHYFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINNMSENFTQRVSTNLEKMKQQNYINETQYQQA MSQLNR ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMQPVGKPPKKKKSKRILLKILLTILIIIALFIGIMYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDER FYNHHGFDLKGTTRALFSTISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQYNKNEILSFYLNNIYFG DNQYTLEGAANHYFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINNMSENFTQRVSTNLEKMKQQNYINETQYQQA MSQLNR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLN n 1 6 PRO n 1 7 VAL n 1 8 GLY n 1 9 LYS n 1 10 PRO n 1 11 PRO n 1 12 LYS n 1 13 LYS n 1 14 LYS n 1 15 LYS n 1 16 SER n 1 17 LYS n 1 18 ARG n 1 19 ILE n 1 20 LEU n 1 21 LEU n 1 22 LYS n 1 23 ILE n 1 24 LEU n 1 25 LEU n 1 26 THR n 1 27 ILE n 1 28 LEU n 1 29 ILE n 1 30 ILE n 1 31 ILE n 1 32 ALA n 1 33 LEU n 1 34 PHE n 1 35 ILE n 1 36 GLY n 1 37 ILE n 1 38 MET n 1 39 TYR n 1 40 PHE n 1 41 LEU n 1 42 SER n 1 43 THR n 1 44 ARG n 1 45 ASP n 1 46 ASN n 1 47 VAL n 1 48 ASP n 1 49 GLU n 1 50 LEU n 1 51 ARG n 1 52 LYS n 1 53 ILE n 1 54 GLU n 1 55 ASN n 1 56 LYS n 1 57 SER n 1 58 SER n 1 59 PHE n 1 60 VAL n 1 61 SER n 1 62 ALA n 1 63 ASP n 1 64 ASN n 1 65 MET n 1 66 PRO n 1 67 GLU n 1 68 TYR n 1 69 VAL n 1 70 LYS n 1 71 GLY n 1 72 ALA n 1 73 PHE n 1 74 ILE n 1 75 SER n 1 76 MET n 1 77 GLU n 1 78 ASP n 1 79 GLU n 1 80 ARG n 1 81 PHE n 1 82 TYR n 1 83 ASN n 1 84 HIS n 1 85 HIS n 1 86 GLY n 1 87 PHE n 1 88 ASP n 1 89 LEU n 1 90 LYS n 1 91 GLY n 1 92 THR n 1 93 THR n 1 94 ARG n 1 95 ALA n 1 96 LEU n 1 97 PHE n 1 98 SER n 1 99 THR n 1 100 ILE n 1 101 SER n 1 102 ASP n 1 103 ARG n 1 104 ASP n 1 105 VAL n 1 106 GLN n 1 107 GLY n 1 108 GLY n 1 109 SER n 1 110 THR n 1 111 ILE n 1 112 THR n 1 113 GLN n 1 114 GLN n 1 115 VAL n 1 116 VAL n 1 117 LYS n 1 118 ASN n 1 119 TYR n 1 120 PHE n 1 121 TYR n 1 122 ASP n 1 123 ASN n 1 124 ASP n 1 125 ARG n 1 126 SER n 1 127 PHE n 1 128 THR n 1 129 ARG n 1 130 LYS n 1 131 VAL n 1 132 LYS n 1 133 GLU n 1 134 LEU n 1 135 PHE n 1 136 VAL n 1 137 ALA n 1 138 HIS n 1 139 ARG n 1 140 VAL n 1 141 GLU n 1 142 LYS n 1 143 GLN n 1 144 TYR n 1 145 ASN n 1 146 LYS n 1 147 ASN n 1 148 GLU n 1 149 ILE n 1 150 LEU n 1 151 SER n 1 152 PHE n 1 153 TYR n 1 154 LEU n 1 155 ASN n 1 156 ASN n 1 157 ILE n 1 158 TYR n 1 159 PHE n 1 160 GLY n 1 161 ASP n 1 162 ASN n 1 163 GLN n 1 164 TYR n 1 165 THR n 1 166 LEU n 1 167 GLU n 1 168 GLY n 1 169 ALA n 1 170 ALA n 1 171 ASN n 1 172 HIS n 1 173 TYR n 1 174 PHE n 1 175 GLY n 1 176 THR n 1 177 THR n 1 178 VAL n 1 179 ASN n 1 180 LYS n 1 181 ASN n 1 182 SER n 1 183 THR n 1 184 THR n 1 185 MET n 1 186 SER n 1 187 HIS n 1 188 ILE n 1 189 THR n 1 190 VAL n 1 191 LEU n 1 192 GLN n 1 193 SER n 1 194 ALA n 1 195 ILE n 1 196 LEU n 1 197 ALA n 1 198 SER n 1 199 LYS n 1 200 VAL n 1 201 ASN n 1 202 ALA n 1 203 PRO n 1 204 SER n 1 205 VAL n 1 206 TYR n 1 207 ASN n 1 208 ILE n 1 209 ASN n 1 210 ASN n 1 211 MET n 1 212 SER n 1 213 GLU n 1 214 ASN n 1 215 PHE n 1 216 THR n 1 217 GLN n 1 218 ARG n 1 219 VAL n 1 220 SER n 1 221 THR n 1 222 ASN n 1 223 LEU n 1 224 GLU n 1 225 LYS n 1 226 MET n 1 227 LYS n 1 228 GLN n 1 229 GLN n 1 230 ASN n 1 231 TYR n 1 232 ILE n 1 233 ASN n 1 234 GLU n 1 235 THR n 1 236 GLN n 1 237 TYR n 1 238 GLN n 1 239 GLN n 1 240 ALA n 1 241 MET n 1 242 SER n 1 243 GLN n 1 244 LEU n 1 245 ASN n 1 246 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 246 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'mgt, SAV1874' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Mu50 / ATCC 700699' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 158878 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MGT_STAAM _struct_ref.pdbx_db_accession Q99T05 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QPVGKPPKKKKSKRILLKILLTILIIIALFIGIMYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDERFYNH HGFDLKGTTRALFSTISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQYNKNEILSFYLNNIYFGDNQY TLEGAANHYFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINNMSENFTQRVSTNLEKMKQQNYINETQYQQAMSQL NR ; _struct_ref.pdbx_align_begin 28 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5ZZK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 246 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q99T05 _struct_ref_seq.db_align_beg 28 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 269 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 28 _struct_ref_seq.pdbx_auth_seq_align_end 269 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5ZZK GLY A 1 ? UNP Q99T05 ? ? 'expression tag' 24 1 1 5ZZK SER A 2 ? UNP Q99T05 ? ? 'expression tag' 25 2 1 5ZZK HIS A 3 ? UNP Q99T05 ? ? 'expression tag' 26 3 1 5ZZK MET A 4 ? UNP Q99T05 ? ? 'expression tag' 27 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5ZZK _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.00 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 63.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 278.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM MgCl2, 100 mM Na HEPES pH 8, and 16 % wt/vol PEG400 (Sigma)' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-08-16 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97622 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSRRC BEAMLINE BL15A1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97622 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL15A1 _diffrn_source.pdbx_synchrotron_site NSRRC # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5ZZK _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.64 _reflns.d_resolution_low 30 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8774 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 51 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.64 _reflns_shell.d_res_low 2.71 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.5 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 51 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.44 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 2.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -1.9900 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 2.3000 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] -0.3100 _refine.B_iso_max 89.640 _refine.B_iso_mean 39.9470 _refine.B_iso_min 18.670 _refine.correlation_coeff_Fo_to_Fc 0.8410 _refine.correlation_coeff_Fo_to_Fc_free 0.7020 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5ZZK _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.6400 _refine.ls_d_res_low 30.0000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8281 _refine.ls_number_reflns_R_free 465 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 82.5500 _refine.ls_percent_reflns_R_free 5.3000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2493 _refine.ls_R_factor_R_free 0.3273 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2451 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3VMQ _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.5720 _refine.pdbx_overall_ESU_R_Free 0.4000 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 24.6180 _refine.overall_SU_ML 0.2460 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.6400 _refine_hist.d_res_low 30.0000 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 1503 _refine_hist.pdbx_number_residues_total 182 _refine_hist.pdbx_B_iso_mean_solvent 23.53 _refine_hist.pdbx_number_atoms_protein 1497 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.021 0.019 1525 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1337 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.142 1.919 2057 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.238 3.000 3113 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.872 5.000 179 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 40.314 25.412 85 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 21.154 15.000 270 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 9.460 15.000 5 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.130 0.200 225 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 1695 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 314 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.6410 _refine_ls_shell.d_res_low 2.7090 _refine_ls_shell.number_reflns_all 141 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 3 _refine_ls_shell.number_reflns_R_work 138 _refine_ls_shell.percent_reflns_obs 19.4200 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2670 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2460 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5ZZK _struct.title 'A Con Artist: Phenylphenoxybenzamide is not a Glycosyltransferase Inhibitor' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5ZZK _struct_keywords.text 'glycosyltransferase membrane associated enzyme lipid II polymerization PBP class A, SUGAR BINDING PROTEIN' _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ILE A 30 ? ASP A 45 ? ILE A 53 ASP A 68 1 ? 16 HELX_P HELX_P2 AA2 VAL A 47 ? GLU A 54 ? VAL A 70 GLU A 77 5 ? 8 HELX_P HELX_P3 AA3 SER A 61 ? MET A 65 ? SER A 84 MET A 88 5 ? 5 HELX_P HELX_P4 AA4 PRO A 66 ? ASP A 78 ? PRO A 89 ASP A 101 1 ? 13 HELX_P HELX_P5 AA5 ILE A 111 ? TYR A 121 ? ILE A 134 TYR A 144 1 ? 11 HELX_P HELX_P6 AA6 GLU A 133 ? TYR A 144 ? GLU A 156 TYR A 167 1 ? 12 HELX_P HELX_P7 AA7 ASN A 145 ? ASN A 155 ? ASN A 168 ASN A 178 1 ? 11 HELX_P HELX_P8 AA8 THR A 165 ? GLY A 175 ? THR A 188 GLY A 198 1 ? 11 HELX_P HELX_P9 AA9 THR A 189 ? VAL A 200 ? THR A 212 VAL A 223 1 ? 12 HELX_P HELX_P10 AB1 ASN A 207 ? MET A 211 ? ASN A 230 MET A 234 5 ? 5 HELX_P HELX_P11 AB2 SER A 212 ? GLN A 229 ? SER A 235 GLN A 252 1 ? 18 HELX_P HELX_P12 AB3 ASN A 233 ? ASN A 245 ? ASN A 256 ASN A 268 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 5ZZK _atom_sites.fract_transf_matrix[1][1] 0.006499 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025227 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017912 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 24 ? ? ? A . n A 1 2 SER 2 25 ? ? ? A . n A 1 3 HIS 3 26 ? ? ? A . n A 1 4 MET 4 27 ? ? ? A . n A 1 5 GLN 5 28 ? ? ? A . n A 1 6 PRO 6 29 ? ? ? A . n A 1 7 VAL 7 30 ? ? ? A . n A 1 8 GLY 8 31 ? ? ? A . n A 1 9 LYS 9 32 ? ? ? A . n A 1 10 PRO 10 33 ? ? ? A . n A 1 11 PRO 11 34 ? ? ? A . n A 1 12 LYS 12 35 ? ? ? A . n A 1 13 LYS 13 36 ? ? ? A . n A 1 14 LYS 14 37 ? ? ? A . n A 1 15 LYS 15 38 ? ? ? A . n A 1 16 SER 16 39 ? ? ? A . n A 1 17 LYS 17 40 ? ? ? A . n A 1 18 ARG 18 41 ? ? ? A . n A 1 19 ILE 19 42 ? ? ? A . n A 1 20 LEU 20 43 ? ? ? A . n A 1 21 LEU 21 44 ? ? ? A . n A 1 22 LYS 22 45 ? ? ? A . n A 1 23 ILE 23 46 ? ? ? A . n A 1 24 LEU 24 47 ? ? ? A . n A 1 25 LEU 25 48 ? ? ? A . n A 1 26 THR 26 49 ? ? ? A . n A 1 27 ILE 27 50 ? ? ? A . n A 1 28 LEU 28 51 ? ? ? A . n A 1 29 ILE 29 52 ? ? ? A . n A 1 30 ILE 30 53 53 ILE ILE A . n A 1 31 ILE 31 54 54 ILE ILE A . n A 1 32 ALA 32 55 55 ALA ALA A . n A 1 33 LEU 33 56 56 LEU LEU A . n A 1 34 PHE 34 57 57 PHE PHE A . n A 1 35 ILE 35 58 58 ILE ILE A . n A 1 36 GLY 36 59 59 GLY GLY A . n A 1 37 ILE 37 60 60 ILE ILE A . n A 1 38 MET 38 61 61 MET MET A . n A 1 39 TYR 39 62 62 TYR TYR A . n A 1 40 PHE 40 63 63 PHE PHE A . n A 1 41 LEU 41 64 64 LEU LEU A . n A 1 42 SER 42 65 65 SER SER A . n A 1 43 THR 43 66 66 THR THR A . n A 1 44 ARG 44 67 67 ARG ARG A . n A 1 45 ASP 45 68 68 ASP ASP A . n A 1 46 ASN 46 69 69 ASN ASN A . n A 1 47 VAL 47 70 70 VAL VAL A . n A 1 48 ASP 48 71 71 ASP ASP A . n A 1 49 GLU 49 72 72 GLU GLU A . n A 1 50 LEU 50 73 73 LEU LEU A . n A 1 51 ARG 51 74 74 ARG ARG A . n A 1 52 LYS 52 75 75 LYS LYS A . n A 1 53 ILE 53 76 76 ILE ILE A . n A 1 54 GLU 54 77 77 GLU GLU A . n A 1 55 ASN 55 78 78 ASN ASN A . n A 1 56 LYS 56 79 79 LYS LYS A . n A 1 57 SER 57 80 80 SER SER A . n A 1 58 SER 58 81 81 SER SER A . n A 1 59 PHE 59 82 82 PHE PHE A . n A 1 60 VAL 60 83 83 VAL VAL A . n A 1 61 SER 61 84 84 SER SER A . n A 1 62 ALA 62 85 85 ALA ALA A . n A 1 63 ASP 63 86 86 ASP ASP A . n A 1 64 ASN 64 87 87 ASN ASN A . n A 1 65 MET 65 88 88 MET MET A . n A 1 66 PRO 66 89 89 PRO PRO A . n A 1 67 GLU 67 90 90 GLU GLU A . n A 1 68 TYR 68 91 91 TYR TYR A . n A 1 69 VAL 69 92 92 VAL VAL A . n A 1 70 LYS 70 93 93 LYS LYS A . n A 1 71 GLY 71 94 94 GLY GLY A . n A 1 72 ALA 72 95 95 ALA ALA A . n A 1 73 PHE 73 96 96 PHE PHE A . n A 1 74 ILE 74 97 97 ILE ILE A . n A 1 75 SER 75 98 98 SER SER A . n A 1 76 MET 76 99 99 MET MET A . n A 1 77 GLU 77 100 100 GLU GLU A . n A 1 78 ASP 78 101 101 ASP ASP A . n A 1 79 GLU 79 102 102 GLU GLU A . n A 1 80 ARG 80 103 103 ARG ARG A . n A 1 81 PHE 81 104 104 PHE PHE A . n A 1 82 TYR 82 105 105 TYR TYR A . n A 1 83 ASN 83 106 106 ASN ASN A . n A 1 84 HIS 84 107 107 HIS HIS A . n A 1 85 HIS 85 108 108 HIS HIS A . n A 1 86 GLY 86 109 ? ? ? A . n A 1 87 PHE 87 110 ? ? ? A . n A 1 88 ASP 88 111 ? ? ? A . n A 1 89 LEU 89 112 ? ? ? A . n A 1 90 LYS 90 113 ? ? ? A . n A 1 91 GLY 91 114 ? ? ? A . n A 1 92 THR 92 115 ? ? ? A . n A 1 93 THR 93 116 ? ? ? A . n A 1 94 ARG 94 117 ? ? ? A . n A 1 95 ALA 95 118 ? ? ? A . n A 1 96 LEU 96 119 ? ? ? A . n A 1 97 PHE 97 120 ? ? ? A . n A 1 98 SER 98 121 ? ? ? A . n A 1 99 THR 99 122 ? ? ? A . n A 1 100 ILE 100 123 ? ? ? A . n A 1 101 SER 101 124 ? ? ? A . n A 1 102 ASP 102 125 ? ? ? A . n A 1 103 ARG 103 126 ? ? ? A . n A 1 104 ASP 104 127 ? ? ? A . n A 1 105 VAL 105 128 ? ? ? A . n A 1 106 GLN 106 129 ? ? ? A . n A 1 107 GLY 107 130 ? ? ? A . n A 1 108 GLY 108 131 ? ? ? A . n A 1 109 SER 109 132 ? ? ? A . n A 1 110 THR 110 133 133 THR THR A . n A 1 111 ILE 111 134 134 ILE ILE A . n A 1 112 THR 112 135 135 THR THR A . n A 1 113 GLN 113 136 136 GLN GLN A . n A 1 114 GLN 114 137 137 GLN GLN A . n A 1 115 VAL 115 138 138 VAL VAL A . n A 1 116 VAL 116 139 139 VAL VAL A . n A 1 117 LYS 117 140 140 LYS LYS A . n A 1 118 ASN 118 141 141 ASN ASN A . n A 1 119 TYR 119 142 142 TYR TYR A . n A 1 120 PHE 120 143 143 PHE PHE A . n A 1 121 TYR 121 144 144 TYR TYR A . n A 1 122 ASP 122 145 ? ? ? A . n A 1 123 ASN 123 146 ? ? ? A . n A 1 124 ASP 124 147 ? ? ? A . n A 1 125 ARG 125 148 ? ? ? A . n A 1 126 SER 126 149 ? ? ? A . n A 1 127 PHE 127 150 ? ? ? A . n A 1 128 THR 128 151 ? ? ? A . n A 1 129 ARG 129 152 ? ? ? A . n A 1 130 LYS 130 153 ? ? ? A . n A 1 131 VAL 131 154 ? ? ? A . n A 1 132 LYS 132 155 155 LYS LYS A . n A 1 133 GLU 133 156 156 GLU GLU A . n A 1 134 LEU 134 157 157 LEU LEU A . n A 1 135 PHE 135 158 158 PHE PHE A . n A 1 136 VAL 136 159 159 VAL VAL A . n A 1 137 ALA 137 160 160 ALA ALA A . n A 1 138 HIS 138 161 161 HIS HIS A . n A 1 139 ARG 139 162 162 ARG ARG A . n A 1 140 VAL 140 163 163 VAL VAL A . n A 1 141 GLU 141 164 164 GLU GLU A . n A 1 142 LYS 142 165 165 LYS LYS A . n A 1 143 GLN 143 166 166 GLN GLN A . n A 1 144 TYR 144 167 167 TYR TYR A . n A 1 145 ASN 145 168 168 ASN ASN A . n A 1 146 LYS 146 169 169 LYS LYS A . n A 1 147 ASN 147 170 170 ASN ASN A . n A 1 148 GLU 148 171 171 GLU GLU A . n A 1 149 ILE 149 172 172 ILE ILE A . n A 1 150 LEU 150 173 173 LEU LEU A . n A 1 151 SER 151 174 174 SER SER A . n A 1 152 PHE 152 175 175 PHE PHE A . n A 1 153 TYR 153 176 176 TYR TYR A . n A 1 154 LEU 154 177 177 LEU LEU A . n A 1 155 ASN 155 178 178 ASN ASN A . n A 1 156 ASN 156 179 179 ASN ASN A . n A 1 157 ILE 157 180 180 ILE ILE A . n A 1 158 TYR 158 181 181 TYR TYR A . n A 1 159 PHE 159 182 182 PHE PHE A . n A 1 160 GLY 160 183 183 GLY GLY A . n A 1 161 ASP 161 184 184 ASP ASP A . n A 1 162 ASN 162 185 185 ASN ASN A . n A 1 163 GLN 163 186 186 GLN GLN A . n A 1 164 TYR 164 187 187 TYR TYR A . n A 1 165 THR 165 188 188 THR THR A . n A 1 166 LEU 166 189 189 LEU LEU A . n A 1 167 GLU 167 190 190 GLU GLU A . n A 1 168 GLY 168 191 191 GLY GLY A . n A 1 169 ALA 169 192 192 ALA ALA A . n A 1 170 ALA 170 193 193 ALA ALA A . n A 1 171 ASN 171 194 194 ASN ASN A . n A 1 172 HIS 172 195 195 HIS HIS A . n A 1 173 TYR 173 196 196 TYR TYR A . n A 1 174 PHE 174 197 197 PHE PHE A . n A 1 175 GLY 175 198 198 GLY GLY A . n A 1 176 THR 176 199 199 THR THR A . n A 1 177 THR 177 200 200 THR THR A . n A 1 178 VAL 178 201 201 VAL VAL A . n A 1 179 ASN 179 202 202 ASN ASN A . n A 1 180 LYS 180 203 203 LYS LYS A . n A 1 181 ASN 181 204 204 ASN ASN A . n A 1 182 SER 182 205 205 SER SER A . n A 1 183 THR 183 206 206 THR THR A . n A 1 184 THR 184 207 207 THR THR A . n A 1 185 MET 185 208 208 MET MET A . n A 1 186 SER 186 209 209 SER SER A . n A 1 187 HIS 187 210 210 HIS HIS A . n A 1 188 ILE 188 211 211 ILE ILE A . n A 1 189 THR 189 212 212 THR THR A . n A 1 190 VAL 190 213 213 VAL VAL A . n A 1 191 LEU 191 214 214 LEU LEU A . n A 1 192 GLN 192 215 215 GLN GLN A . n A 1 193 SER 193 216 216 SER SER A . n A 1 194 ALA 194 217 217 ALA ALA A . n A 1 195 ILE 195 218 218 ILE ILE A . n A 1 196 LEU 196 219 219 LEU LEU A . n A 1 197 ALA 197 220 220 ALA ALA A . n A 1 198 SER 198 221 221 SER SER A . n A 1 199 LYS 199 222 222 LYS LYS A . n A 1 200 VAL 200 223 223 VAL VAL A . n A 1 201 ASN 201 224 224 ASN ASN A . n A 1 202 ALA 202 225 225 ALA ALA A . n A 1 203 PRO 203 226 226 PRO PRO A . n A 1 204 SER 204 227 227 SER SER A . n A 1 205 VAL 205 228 228 VAL VAL A . n A 1 206 TYR 206 229 229 TYR TYR A . n A 1 207 ASN 207 230 230 ASN ASN A . n A 1 208 ILE 208 231 231 ILE ILE A . n A 1 209 ASN 209 232 232 ASN ASN A . n A 1 210 ASN 210 233 233 ASN ASN A . n A 1 211 MET 211 234 234 MET MET A . n A 1 212 SER 212 235 235 SER SER A . n A 1 213 GLU 213 236 236 GLU GLU A . n A 1 214 ASN 214 237 237 ASN ASN A . n A 1 215 PHE 215 238 238 PHE PHE A . n A 1 216 THR 216 239 239 THR THR A . n A 1 217 GLN 217 240 240 GLN GLN A . n A 1 218 ARG 218 241 241 ARG ARG A . n A 1 219 VAL 219 242 242 VAL VAL A . n A 1 220 SER 220 243 243 SER SER A . n A 1 221 THR 221 244 244 THR THR A . n A 1 222 ASN 222 245 245 ASN ASN A . n A 1 223 LEU 223 246 246 LEU LEU A . n A 1 224 GLU 224 247 247 GLU GLU A . n A 1 225 LYS 225 248 248 LYS LYS A . n A 1 226 MET 226 249 249 MET MET A . n A 1 227 LYS 227 250 250 LYS LYS A . n A 1 228 GLN 228 251 251 GLN GLN A . n A 1 229 GLN 229 252 252 GLN GLN A . n A 1 230 ASN 230 253 253 ASN ASN A . n A 1 231 TYR 231 254 254 TYR TYR A . n A 1 232 ILE 232 255 255 ILE ILE A . n A 1 233 ASN 233 256 256 ASN ASN A . n A 1 234 GLU 234 257 257 GLU GLU A . n A 1 235 THR 235 258 258 THR THR A . n A 1 236 GLN 236 259 259 GLN GLN A . n A 1 237 TYR 237 260 260 TYR TYR A . n A 1 238 GLN 238 261 261 GLN GLN A . n A 1 239 GLN 239 262 262 GLN GLN A . n A 1 240 ALA 240 263 263 ALA ALA A . n A 1 241 MET 241 264 264 MET MET A . n A 1 242 SER 242 265 265 SER SER A . n A 1 243 GLN 243 266 266 GLN GLN A . n A 1 244 LEU 244 267 267 LEU LEU A . n A 1 245 ASN 245 268 268 ASN ASN A . n A 1 246 ARG 246 269 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 3 HOH HOH A . B 2 HOH 2 302 7 HOH HOH A . B 2 HOH 3 303 8 HOH HOH A . B 2 HOH 4 304 6 HOH HOH A . B 2 HOH 5 305 5 HOH HOH A . B 2 HOH 6 306 2 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 9840 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-06-20 2 'Structure model' 1 1 2019-01-02 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' citation 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.pdbx_database_id_DOI' 5 2 'Structure model' '_citation.year' 6 3 'Structure model' '_citation.journal_id_ISSN' 7 3 'Structure model' '_database_2.pdbx_DOI' 8 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -19.5990 15.0000 -13.4800 0.4012 0.2506 0.4336 0.0930 0.1259 0.0791 4.4306 0.3719 1.7822 0.1352 0.5749 0.2918 -0.0362 0.0396 -0.0034 0.1263 -0.2454 -0.3699 -0.0846 0.2824 0.6436 'X-RAY DIFFRACTION' 2 ? refined -21.1450 13.2580 -9.4140 0.3080 0.3519 0.4690 0.2332 0.1169 0.1022 5.9050 1.7346 10.8503 0.7719 7.8494 0.2554 -0.1364 -0.0069 0.1433 0.0662 -0.1929 -0.7596 0.1424 -0.1337 0.2211 'X-RAY DIFFRACTION' 3 ? refined -33.1540 22.9560 -12.4870 0.2103 0.0436 0.0699 0.0054 0.0112 0.0127 1.4777 2.4628 2.5651 0.5344 -0.1666 -0.3120 -0.0576 -0.0438 0.1013 0.1625 0.0293 -0.1526 -0.0218 0.0069 0.1151 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 53 A 108 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 133 A 144 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 155 A 268 ? ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0189 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 71 ? ? CG A ASP 71 ? ? OD1 A ASP 71 ? ? 125.07 118.30 6.77 0.90 N 2 1 CB A VAL 228 ? ? CA A VAL 228 ? ? C A VAL 228 ? ? 96.46 111.40 -14.94 1.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 101 ? ? -159.57 73.76 2 1 ASN A 179 ? ? -153.42 74.11 3 1 ASN A 185 ? ? 75.48 32.98 4 1 SER A 209 ? ? -37.71 132.47 5 1 ASN A 233 ? ? -158.50 81.41 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 24 ? A GLY 1 2 1 Y 1 A SER 25 ? A SER 2 3 1 Y 1 A HIS 26 ? A HIS 3 4 1 Y 1 A MET 27 ? A MET 4 5 1 Y 1 A GLN 28 ? A GLN 5 6 1 Y 1 A PRO 29 ? A PRO 6 7 1 Y 1 A VAL 30 ? A VAL 7 8 1 Y 1 A GLY 31 ? A GLY 8 9 1 Y 1 A LYS 32 ? A LYS 9 10 1 Y 1 A PRO 33 ? A PRO 10 11 1 Y 1 A PRO 34 ? A PRO 11 12 1 Y 1 A LYS 35 ? A LYS 12 13 1 Y 1 A LYS 36 ? A LYS 13 14 1 Y 1 A LYS 37 ? A LYS 14 15 1 Y 1 A LYS 38 ? A LYS 15 16 1 Y 1 A SER 39 ? A SER 16 17 1 Y 1 A LYS 40 ? A LYS 17 18 1 Y 1 A ARG 41 ? A ARG 18 19 1 Y 1 A ILE 42 ? A ILE 19 20 1 Y 1 A LEU 43 ? A LEU 20 21 1 Y 1 A LEU 44 ? A LEU 21 22 1 Y 1 A LYS 45 ? A LYS 22 23 1 Y 1 A ILE 46 ? A ILE 23 24 1 Y 1 A LEU 47 ? A LEU 24 25 1 Y 1 A LEU 48 ? A LEU 25 26 1 Y 1 A THR 49 ? A THR 26 27 1 Y 1 A ILE 50 ? A ILE 27 28 1 Y 1 A LEU 51 ? A LEU 28 29 1 Y 1 A ILE 52 ? A ILE 29 30 1 Y 1 A GLY 109 ? A GLY 86 31 1 Y 1 A PHE 110 ? A PHE 87 32 1 Y 1 A ASP 111 ? A ASP 88 33 1 Y 1 A LEU 112 ? A LEU 89 34 1 Y 1 A LYS 113 ? A LYS 90 35 1 Y 1 A GLY 114 ? A GLY 91 36 1 Y 1 A THR 115 ? A THR 92 37 1 Y 1 A THR 116 ? A THR 93 38 1 Y 1 A ARG 117 ? A ARG 94 39 1 Y 1 A ALA 118 ? A ALA 95 40 1 Y 1 A LEU 119 ? A LEU 96 41 1 Y 1 A PHE 120 ? A PHE 97 42 1 Y 1 A SER 121 ? A SER 98 43 1 Y 1 A THR 122 ? A THR 99 44 1 Y 1 A ILE 123 ? A ILE 100 45 1 Y 1 A SER 124 ? A SER 101 46 1 Y 1 A ASP 125 ? A ASP 102 47 1 Y 1 A ARG 126 ? A ARG 103 48 1 Y 1 A ASP 127 ? A ASP 104 49 1 Y 1 A VAL 128 ? A VAL 105 50 1 Y 1 A GLN 129 ? A GLN 106 51 1 Y 1 A GLY 130 ? A GLY 107 52 1 Y 1 A GLY 131 ? A GLY 108 53 1 Y 1 A SER 132 ? A SER 109 54 1 Y 1 A ASP 145 ? A ASP 122 55 1 Y 1 A ASN 146 ? A ASN 123 56 1 Y 1 A ASP 147 ? A ASP 124 57 1 Y 1 A ARG 148 ? A ARG 125 58 1 Y 1 A SER 149 ? A SER 126 59 1 Y 1 A PHE 150 ? A PHE 127 60 1 Y 1 A THR 151 ? A THR 128 61 1 Y 1 A ARG 152 ? A ARG 129 62 1 Y 1 A LYS 153 ? A LYS 130 63 1 Y 1 A VAL 154 ? A VAL 131 64 1 Y 1 A ARG 269 ? A ARG 246 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TYR N N N N 307 TYR CA C N S 308 TYR C C N N 309 TYR O O N N 310 TYR CB C N N 311 TYR CG C Y N 312 TYR CD1 C Y N 313 TYR CD2 C Y N 314 TYR CE1 C Y N 315 TYR CE2 C Y N 316 TYR CZ C Y N 317 TYR OH O N N 318 TYR OXT O N N 319 TYR H H N N 320 TYR H2 H N N 321 TYR HA H N N 322 TYR HB2 H N N 323 TYR HB3 H N N 324 TYR HD1 H N N 325 TYR HD2 H N N 326 TYR HE1 H N N 327 TYR HE2 H N N 328 TYR HH H N N 329 TYR HXT H N N 330 VAL N N N N 331 VAL CA C N S 332 VAL C C N N 333 VAL O O N N 334 VAL CB C N N 335 VAL CG1 C N N 336 VAL CG2 C N N 337 VAL OXT O N N 338 VAL H H N N 339 VAL H2 H N N 340 VAL HA H N N 341 VAL HB H N N 342 VAL HG11 H N N 343 VAL HG12 H N N 344 VAL HG13 H N N 345 VAL HG21 H N N 346 VAL HG22 H N N 347 VAL HG23 H N N 348 VAL HXT H N N 349 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3VMQ _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details 'based on the packing of the monoglycosyltransferase molecules in the protein crystal' #