HEADER REPLICATION 28-MAY-15 5A39 TITLE STRUCTURE OF RAD14 IN COMPLEX WITH CISPLATIN CONTAINING DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA REPAIR PROTEIN RAD14; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: DNA BINDING DOMAIN, UNP RESIDUES 188-302; COMPND 5 SYNONYM: RAD14; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA; COMPND 9 CHAIN: C, D; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: 5'-D(*DTP*GP*AP*TP*GP*AP*CP*CP*GP*TP*AP*GP*AP)-3'; COMPND 12 CHAIN: E, F; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: 5'-D(*DGP*AP*TP*GP*AP*CP*CP*GP*TP*AP*GP*AP*GP)-3'; COMPND 15 CHAIN: G, H SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 10 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 11 ORGANISM_TAXID: 4932; SOURCE 12 MOL_ID: 3; SOURCE 13 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 14 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 15 ORGANISM_TAXID: 4932; SOURCE 16 MOL_ID: 4; SOURCE 17 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 18 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 19 ORGANISM_TAXID: 4932 KEYWDS REPLICATION, DNA REPAIR, DNA DAMAGE RECOGNITION, CISPLATIN EXPDTA X-RAY DIFFRACTION AUTHOR S.C.KOCH,J.KUPER,K.L.GASTEIGER,N.WICHLEIN,R.STRASSER,D.EISEN, AUTHOR 2 S.GEIGER,S.SCHNEIDER,C.KISKER,T.CARELL REVDAT 3 22-JUL-15 5A39 1 JRNL REVDAT 2 01-JUL-15 5A39 1 JRNL REVDAT 1 24-JUN-15 5A39 0 JRNL AUTH S.C.KOCH,J.KUPER,K.L.GASTEIGER,N.SIMON,R.STRASSER,D.EISEN, JRNL AUTH 2 S.GEIGER,S.SCHNEIDER,C.KISKER,T.CARELL JRNL TITL STRUCTURAL INSIGHTS INTO THE RECOGNITION OF CISPLATIN AND JRNL TITL 2 AAF-DG LESION BY RAD14 (XPA). JRNL REF PROC.NATL.ACAD.SCI.USA V. 112 8272 2015 JRNL REFN ISSN 0027-8424 JRNL PMID 26100901 JRNL DOI 10.1073/PNAS.1508509112 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU, REMARK 3 STEINER,NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 99.78 REMARK 3 NUMBER OF REFLECTIONS : 8935 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.21462 REMARK 3 R VALUE (WORKING SET) : 0.21255 REMARK 3 FREE R VALUE : 0.25554 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.8 REMARK 3 FREE R VALUE TEST SET COUNT : 455 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.800 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.873 REMARK 3 REFLECTION IN BIN (WORKING SET) : 686 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.388 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.346 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1876 REMARK 3 NUCLEIC ACID ATOMS : 2022 REMARK 3 HETEROGEN ATOMS : 190 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.729 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.00 REMARK 3 B22 (A**2) : 2.00 REMARK 3 B33 (A**2) : -3.99 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.492 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.475 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 52.619 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4401 ; 0.012 ; 0.015 REMARK 3 BOND LENGTHS OTHERS (A): 3002 ; 0.012 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6409 ; 1.570 ; 1.584 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7023 ; 1.807 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 227 ; 6.337 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 105 ;33.092 ;24.952 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 349 ;18.834 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;22.341 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 587 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3561 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 977 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 914 ; 0.842 ; 1.148 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 913 ; 0.841 ; 1.147 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1139 ; 1.477 ; 1.714 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3487 ; 0.881 ; 0.841 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 22 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 110 REMARK 3 ORIGIN FOR THE GROUP (A): 29.1138 -22.6749 6.6962 REMARK 3 T TENSOR REMARK 3 T11: 0.4484 T22: 0.5284 REMARK 3 T33: 0.4273 T12: -0.0124 REMARK 3 T13: 0.0561 T23: 0.0531 REMARK 3 L TENSOR REMARK 3 L11: 2.5169 L22: 10.9202 REMARK 3 L33: 4.2146 L12: 0.5173 REMARK 3 L13: 1.3755 L23: 0.0241 REMARK 3 S TENSOR REMARK 3 S11: 0.3378 S12: -0.2904 S13: 0.3488 REMARK 3 S21: 0.1434 S22: -0.3245 S23: -0.6761 REMARK 3 S31: -0.3026 S32: 0.3760 S33: -0.0133 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 111 A 128 REMARK 3 ORIGIN FOR THE GROUP (A): 28.8127 -21.9593 -4.2994 REMARK 3 T TENSOR REMARK 3 T11: 0.4319 T22: 0.5255 REMARK 3 T33: 0.4814 T12: 0.0232 REMARK 3 T13: 0.0346 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 3.4569 L22: 0.3409 REMARK 3 L33: 9.5827 L12: -1.0177 REMARK 3 L13: -5.7168 L23: 1.6219 REMARK 3 S TENSOR REMARK 3 S11: -0.1248 S12: -0.1816 S13: -0.1101 REMARK 3 S21: -0.0415 S22: -0.0441 S23: -0.0342 REMARK 3 S31: 0.3863 S32: 0.4767 S33: 0.1689 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 129 A 144 REMARK 3 ORIGIN FOR THE GROUP (A): 20.7134 -14.3665 -8.8530 REMARK 3 T TENSOR REMARK 3 T11: 0.3481 T22: 0.4320 REMARK 3 T33: 0.4470 T12: 0.0155 REMARK 3 T13: 0.0643 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.1306 L22: 4.6210 REMARK 3 L33: 11.9423 L12: -0.1140 REMARK 3 L13: -0.1531 L23: -5.0885 REMARK 3 S TENSOR REMARK 3 S11: -0.0416 S12: -0.0840 S13: -0.1259 REMARK 3 S21: 0.1861 S22: 0.2110 S23: 0.2010 REMARK 3 S31: -0.0411 S32: -0.4809 S33: -0.1694 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 145 A 157 REMARK 3 ORIGIN FOR THE GROUP (A): 25.1511 -4.6246 -19.4071 REMARK 3 T TENSOR REMARK 3 T11: 0.4514 T22: 0.4303 REMARK 3 T33: 0.4305 T12: -0.0273 REMARK 3 T13: 0.0075 T23: -0.0377 REMARK 3 L TENSOR REMARK 3 L11: 3.1798 L22: 6.4031 REMARK 3 L33: 2.7935 L12: -1.9910 REMARK 3 L13: -1.3891 L23: -0.7509 REMARK 3 S TENSOR REMARK 3 S11: 0.2239 S12: 0.2008 S13: 0.2447 REMARK 3 S21: -0.0787 S22: -0.2054 S23: 0.2431 REMARK 3 S31: -0.1471 S32: -0.2310 S33: -0.0184 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 158 A 166 REMARK 3 ORIGIN FOR THE GROUP (A): 31.4873 -14.4788 -16.5378 REMARK 3 T TENSOR REMARK 3 T11: 0.4735 T22: 0.4832 REMARK 3 T33: 0.7009 T12: 0.0174 REMARK 3 T13: 0.1240 T23: 0.0662 REMARK 3 L TENSOR REMARK 3 L11: 7.3097 L22: 4.0159 REMARK 3 L33: 7.3324 L12: 1.1638 REMARK 3 L13: 6.3930 L23: 3.4975 REMARK 3 S TENSOR REMARK 3 S11: 0.0919 S12: 0.2251 S13: -0.0331 REMARK 3 S21: -0.3768 S22: 0.1169 S23: -0.7009 REMARK 3 S31: -0.0900 S32: 0.3330 S33: -0.2088 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 167 A 204 REMARK 3 ORIGIN FOR THE GROUP (A): 22.6810 -7.4813 -15.6499 REMARK 3 T TENSOR REMARK 3 T11: 0.3696 T22: 0.3249 REMARK 3 T33: 0.4765 T12: -0.0543 REMARK 3 T13: 0.0356 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 2.3274 L22: 3.6350 REMARK 3 L33: 4.5143 L12: -0.5916 REMARK 3 L13: 0.0125 L23: 0.9306 REMARK 3 S TENSOR REMARK 3 S11: -0.1113 S12: -0.3315 S13: 0.2905 REMARK 3 S21: 0.5890 S22: -0.1267 S23: 0.5612 REMARK 3 S31: -0.2603 S32: -0.0775 S33: 0.2380 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 205 A 213 REMARK 3 ORIGIN FOR THE GROUP (A): 12.1187 7.3506 -21.5084 REMARK 3 T TENSOR REMARK 3 T11: 0.6185 T22: 0.5747 REMARK 3 T33: 0.6358 T12: 0.0018 REMARK 3 T13: 0.0394 T23: -0.0330 REMARK 3 L TENSOR REMARK 3 L11: 15.2805 L22: 6.7635 REMARK 3 L33: 0.3878 L12: -5.2787 REMARK 3 L13: -2.0835 L23: 0.0301 REMARK 3 S TENSOR REMARK 3 S11: -0.1100 S12: 0.0902 S13: -0.2575 REMARK 3 S21: -0.1045 S22: 0.1722 S23: 0.4746 REMARK 3 S31: -0.0181 S32: -0.0262 S33: -0.0622 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 100 B 110 REMARK 3 ORIGIN FOR THE GROUP (A): 4.6403 1.7829 -6.5754 REMARK 3 T TENSOR REMARK 3 T11: 0.5899 T22: 0.4977 REMARK 3 T33: 0.4784 T12: -0.0115 REMARK 3 T13: -0.0150 T23: -0.0155 REMARK 3 L TENSOR REMARK 3 L11: 6.8408 L22: 1.3334 REMARK 3 L33: 4.2362 L12: 2.2704 REMARK 3 L13: 1.5782 L23: 2.0167 REMARK 3 S TENSOR REMARK 3 S11: -0.0632 S12: 0.4256 S13: 0.2586 REMARK 3 S21: -0.0770 S22: 0.0879 S23: 0.0144 REMARK 3 S31: -0.1972 S32: 0.0021 S33: -0.0246 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 111 B 130 REMARK 3 ORIGIN FOR THE GROUP (A): 5.3099 0.6611 4.3167 REMARK 3 T TENSOR REMARK 3 T11: 0.5127 T22: 0.4495 REMARK 3 T33: 0.4210 T12: 0.0288 REMARK 3 T13: 0.0014 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 2.8583 L22: 8.7178 REMARK 3 L33: 9.7022 L12: 3.4312 REMARK 3 L13: 3.2150 L23: 9.1445 REMARK 3 S TENSOR REMARK 3 S11: -0.1263 S12: 0.4853 S13: 0.3345 REMARK 3 S21: 0.0668 S22: 0.1129 S23: 0.0600 REMARK 3 S31: 0.0916 S32: -0.0631 S33: 0.0134 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 131 B 157 REMARK 3 ORIGIN FOR THE GROUP (A): 18.0503 -4.2550 14.3892 REMARK 3 T TENSOR REMARK 3 T11: 0.3574 T22: 0.4158 REMARK 3 T33: 0.3978 T12: 0.0159 REMARK 3 T13: 0.0449 T23: -0.0583 REMARK 3 L TENSOR REMARK 3 L11: 6.4240 L22: 3.6863 REMARK 3 L33: 2.0290 L12: -0.2461 REMARK 3 L13: 1.9478 L23: -1.5448 REMARK 3 S TENSOR REMARK 3 S11: 0.1345 S12: 0.0587 S13: -0.4817 REMARK 3 S21: -0.0560 S22: -0.1315 S23: -0.2451 REMARK 3 S31: 0.3712 S32: 0.5621 S33: -0.0031 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 158 B 174 REMARK 3 ORIGIN FOR THE GROUP (A): 9.6038 -0.1647 21.2642 REMARK 3 T TENSOR REMARK 3 T11: 0.4236 T22: 0.3808 REMARK 3 T33: 0.5054 T12: 0.0244 REMARK 3 T13: 0.0293 T23: -0.0655 REMARK 3 L TENSOR REMARK 3 L11: 5.7133 L22: 5.7210 REMARK 3 L33: 9.2965 L12: 4.9040 REMARK 3 L13: -5.0643 L23: -7.0344 REMARK 3 S TENSOR REMARK 3 S11: -0.0688 S12: -0.0722 S13: 0.1359 REMARK 3 S21: -0.0979 S22: 0.0031 S23: 0.0407 REMARK 3 S31: 0.0318 S32: -0.0595 S33: 0.0657 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 175 B 196 REMARK 3 ORIGIN FOR THE GROUP (A): 19.9811 -1.6389 13.3038 REMARK 3 T TENSOR REMARK 3 T11: 0.3645 T22: 0.4530 REMARK 3 T33: 0.4280 T12: -0.0472 REMARK 3 T13: -0.0268 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 2.3470 L22: 2.7402 REMARK 3 L33: 2.9104 L12: -0.6951 REMARK 3 L13: -1.0099 L23: 0.5101 REMARK 3 S TENSOR REMARK 3 S11: 0.1256 S12: 0.4332 S13: -0.1578 REMARK 3 S21: -0.2691 S22: -0.1845 S23: -0.3472 REMARK 3 S31: -0.0699 S32: 0.2410 S33: 0.0589 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 197 B 207 REMARK 3 ORIGIN FOR THE GROUP (A): 32.6501 -11.0339 14.1310 REMARK 3 T TENSOR REMARK 3 T11: 0.5566 T22: 0.5235 REMARK 3 T33: 0.6067 T12: 0.0087 REMARK 3 T13: 0.0773 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 2.7695 L22: 4.9185 REMARK 3 L33: 5.9695 L12: -0.1932 REMARK 3 L13: -1.5834 L23: -2.9881 REMARK 3 S TENSOR REMARK 3 S11: -0.3850 S12: 0.2478 S13: -0.2110 REMARK 3 S21: -0.0335 S22: -0.2295 S23: -0.3634 REMARK 3 S31: 0.4630 S32: 0.3042 S33: 0.6144 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 208 B 214 REMARK 3 ORIGIN FOR THE GROUP (A): 35.7207 -18.4180 24.1126 REMARK 3 T TENSOR REMARK 3 T11: 0.7560 T22: 0.7403 REMARK 3 T33: 0.8383 T12: -0.0182 REMARK 3 T13: 0.0610 T23: -0.0843 REMARK 3 L TENSOR REMARK 3 L11: 2.8361 L22: 6.8221 REMARK 3 L33: 0.2198 L12: 3.1332 REMARK 3 L13: -0.6430 L23: -0.5794 REMARK 3 S TENSOR REMARK 3 S11: 0.2778 S12: -0.0025 S13: -0.2386 REMARK 3 S21: 0.5979 S22: -0.1605 S23: 0.3958 REMARK 3 S31: -0.0935 S32: 0.0994 S33: -0.1173 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 14 REMARK 3 ORIGIN FOR THE GROUP (A): 26.9072 0.2232 34.0665 REMARK 3 T TENSOR REMARK 3 T11: 0.3108 T22: 0.4565 REMARK 3 T33: 0.6343 T12: 0.0414 REMARK 3 T13: -0.1263 T23: 0.0261 REMARK 3 L TENSOR REMARK 3 L11: 0.4303 L22: 3.8513 REMARK 3 L33: 3.1532 L12: 0.8207 REMARK 3 L13: -0.5273 L23: 1.2089 REMARK 3 S TENSOR REMARK 3 S11: -0.1857 S12: -0.0403 S13: -0.2279 REMARK 3 S21: -0.3608 S22: 0.1184 S23: -0.2868 REMARK 3 S31: 0.1594 S32: 0.2151 S33: 0.0673 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 0 G 12 REMARK 3 ORIGIN FOR THE GROUP (A): 28.0266 1.2199 32.4043 REMARK 3 T TENSOR REMARK 3 T11: 0.3860 T22: 0.5266 REMARK 3 T33: 0.7390 T12: -0.0143 REMARK 3 T13: -0.0175 T23: 0.0530 REMARK 3 L TENSOR REMARK 3 L11: 4.8972 L22: 2.2700 REMARK 3 L33: 3.3392 L12: -3.2860 REMARK 3 L13: 3.3064 L23: -2.1739 REMARK 3 S TENSOR REMARK 3 S11: 0.1541 S12: -0.2628 S13: -0.0193 REMARK 3 S21: -0.0987 S22: 0.0198 S23: -0.1407 REMARK 3 S31: -0.1864 S32: -0.2121 S33: -0.1739 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 15 REMARK 3 ORIGIN FOR THE GROUP (A): 28.3106 0.8001 33.8210 REMARK 3 T TENSOR REMARK 3 T11: 0.2998 T22: 0.3624 REMARK 3 T33: 0.7580 T12: 0.0014 REMARK 3 T13: -0.0460 T23: 0.0559 REMARK 3 L TENSOR REMARK 3 L11: 0.0290 L22: 8.6732 REMARK 3 L33: 4.1877 L12: 0.3645 REMARK 3 L13: 0.0573 L23: 1.8758 REMARK 3 S TENSOR REMARK 3 S11: -0.0793 S12: -0.0013 S13: -0.0655 REMARK 3 S21: -0.9743 S22: 0.2486 S23: 0.1326 REMARK 3 S31: -0.0627 S32: 0.0995 S33: -0.1693 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 2 E 14 REMARK 3 ORIGIN FOR THE GROUP (A): 28.0610 1.0707 32.3123 REMARK 3 T TENSOR REMARK 3 T11: 0.3278 T22: 0.6256 REMARK 3 T33: 1.0745 T12: -0.0454 REMARK 3 T13: -0.0854 T23: 0.2081 REMARK 3 L TENSOR REMARK 3 L11: 3.8011 L22: 0.6138 REMARK 3 L33: 4.0351 L12: -0.2015 REMARK 3 L13: 2.2588 L23: 0.2147 REMARK 3 S TENSOR REMARK 3 S11: 0.3213 S12: -0.7794 S13: -0.4656 REMARK 3 S21: -0.1174 S22: -0.2249 S23: -0.6413 REMARK 3 S31: -0.5000 S32: -0.3869 S33: -0.0964 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 15 REMARK 3 ORIGIN FOR THE GROUP (A): 26.9792 0.2779 31.3360 REMARK 3 T TENSOR REMARK 3 T11: 0.2500 T22: 0.3749 REMARK 3 T33: 1.2428 T12: -0.0109 REMARK 3 T13: 0.0711 T23: 0.2388 REMARK 3 L TENSOR REMARK 3 L11: 2.7530 L22: 2.0765 REMARK 3 L33: 6.4144 L12: -1.0575 REMARK 3 L13: 2.9688 L23: 0.5370 REMARK 3 S TENSOR REMARK 3 S11: 0.1192 S12: -0.5804 S13: -0.1281 REMARK 3 S21: -0.1038 S22: 0.1585 S23: -1.0065 REMARK 3 S31: 0.1608 S32: -0.3273 S33: -0.2777 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 0 H 12 REMARK 3 ORIGIN FOR THE GROUP (A): 26.0895 -0.8262 33.0989 REMARK 3 T TENSOR REMARK 3 T11: 0.3863 T22: 0.3451 REMARK 3 T33: 0.5759 T12: -0.0571 REMARK 3 T13: -0.0941 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.9143 L22: 3.9798 REMARK 3 L33: 4.4685 L12: 0.2764 REMARK 3 L13: -1.7827 L23: 1.4036 REMARK 3 S TENSOR REMARK 3 S11: -0.2088 S12: 0.1783 S13: -0.2382 REMARK 3 S21: -0.7708 S22: 0.1260 S23: -0.7721 REMARK 3 S31: 0.0127 S32: -0.2712 S33: 0.0828 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 14 REMARK 3 ORIGIN FOR THE GROUP (A): 26.7312 -1.3204 31.7628 REMARK 3 T TENSOR REMARK 3 T11: 0.1231 T22: 0.5640 REMARK 3 T33: 0.7462 T12: -0.0797 REMARK 3 T13: -0.0924 T23: 0.1143 REMARK 3 L TENSOR REMARK 3 L11: 4.6120 L22: 0.7308 REMARK 3 L33: 4.2231 L12: 0.4459 REMARK 3 L13: 1.1757 L23: 0.9334 REMARK 3 S TENSOR REMARK 3 S11: 0.3264 S12: -0.8190 S13: -0.1829 REMARK 3 S21: 0.0549 S22: -0.3709 S23: -0.5203 REMARK 3 S31: -0.1459 S32: -0.1637 S33: 0.0445 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 2 F 14 REMARK 3 ORIGIN FOR THE GROUP (A): 26.0427 -0.7811 33.0106 REMARK 3 T TENSOR REMARK 3 T11: 0.3760 T22: 0.3513 REMARK 3 T33: 0.7701 T12: -0.0478 REMARK 3 T13: -0.0746 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.9461 L22: 9.1244 REMARK 3 L33: 6.0415 L12: 1.0608 REMARK 3 L13: -1.4711 L23: 3.5028 REMARK 3 S TENSOR REMARK 3 S11: -0.3061 S12: 0.2356 S13: -0.3643 REMARK 3 S21: -1.0523 S22: 0.2477 S23: -0.6745 REMARK 3 S31: -0.0210 S32: -0.3415 S33: 0.0583 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. U VALUES WITH TLS ADDED REMARK 3 BIOMOLECULE IS COMPLETED BY CRYSTAL SYMMETRY REMARK 4 REMARK 4 5A39 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAY-15. REMARK 100 THE PDBE ID CODE IS EBI-63882. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9402 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.80 REMARK 200 RESOLUTION RANGE LOW (A) : 54.40 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.2 REMARK 200 R MERGE (I) : 0.15 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.10 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.1 REMARK 200 R MERGE FOR SHELL (I) : 1.33 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MAGNESIUM ACETATE 0.1M MES REMARK 280 PH 6.5 30% MPD REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.38650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.69325 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 98.07975 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 54.42100 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 65.38650 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, D, E, F, G, H REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 54.42100 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -65.38650 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 213 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 210 CG CD CE NZ REMARK 470 HIS B 212 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 213 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 214 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG C 8 C5 A DG C 8 C4 A 0.100 REMARK 500 DG C 8 C5 A DG C 8 C6 A 0.062 REMARK 500 DG C 8 C6 A DG C 8 N1 A -0.047 REMARK 500 DG C 8 C8 A DG C 8 N7 A 0.060 REMARK 500 DG C 9 C5 A DG C 9 C4 A 0.077 REMARK 500 DG C 9 C6 A DG C 9 N1 A -0.051 REMARK 500 DG C 9 C8 A DG C 9 N7 A 0.059 REMARK 500 DG C 9 N7 A DG C 9 C5 A -0.052 REMARK 500 DG C 9 N9 A DG C 9 C4 A -0.059 REMARK 500 DG D 8 C5 C DG D 8 C4 C 0.097 REMARK 500 DG D 8 C5 C DG D 8 C6 C 0.064 REMARK 500 DG D 8 C6 C DG D 8 N1 C -0.044 REMARK 500 DG D 8 C8 C DG D 8 N7 C 0.055 REMARK 500 DG D 8 N7 C DG D 8 C5 C -0.036 REMARK 500 DG D 9 C5 C DG D 9 C4 C 0.083 REMARK 500 DG D 9 C6 C DG D 9 N1 C -0.049 REMARK 500 DG D 9 C8 C DG D 9 N7 C 0.057 REMARK 500 DG D 9 N7 C DG D 9 C5 C -0.038 REMARK 500 DG D 9 N9 C DG D 9 C4 C -0.055 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT C 1 C5' - C4' - C3' ANGL. DEV. = 7.8 DEGREES REMARK 500 DT C 1 C5' - C4' - O4' ANGL. DEV. = 8.7 DEGREES REMARK 500 DG C 8 C2 - N3 - C4 ANGL. DEV. = 8.0 DEGREES REMARK 500 DG C 8 C4 - C5 - N7 ANGL. DEV. = -3.7 DEGREES REMARK 500 DG C 8 C5 - C6 - N1 ANGL. DEV. = 6.8 DEGREES REMARK 500 DG C 8 C5 - C6 - O6 ANGL. DEV. = -7.7 DEGREES REMARK 500 DG C 8 C6 - C5 - N7 ANGL. DEV. = 7.0 DEGREES REMARK 500 DG C 8 N3 - C4 - C5 ANGL. DEV. = -7.9 DEGREES REMARK 500 DG C 8 N3 - C4 - N9 ANGL. DEV. = 7.0 DEGREES REMARK 500 DG C 8 O4' - C1' - N9 ANGL. DEV. = 6.0 DEGREES REMARK 500 DG C 9 C2 - N3 - C4 ANGL. DEV. = 8.5 DEGREES REMARK 500 DG C 9 C4 - C5 - N7 ANGL. DEV. = -4.3 DEGREES REMARK 500 DG C 9 C5 - C6 - N1 ANGL. DEV. = 6.2 DEGREES REMARK 500 DG C 9 C5 - C6 - O6 ANGL. DEV. = -8.3 DEGREES REMARK 500 DG C 9 C5 - N7 - C8 ANGL. DEV. = 3.1 DEGREES REMARK 500 DG C 9 C6 - C5 - N7 ANGL. DEV. = 6.2 DEGREES REMARK 500 DG C 9 N3 - C4 - C5 ANGL. DEV. = -8.7 DEGREES REMARK 500 DG C 9 N3 - C4 - N9 ANGL. DEV. = 6.9 DEGREES REMARK 500 DT D 1 C5' - C4' - C3' ANGL. DEV. = 8.4 DEGREES REMARK 500 DT D 1 C5' - C4' - O4' ANGL. DEV. = 10.0 DEGREES REMARK 500 DG D 8 C2 - N3 - C4 ANGL. DEV. = 8.8 DEGREES REMARK 500 DG D 8 C4 - C5 - N7 ANGL. DEV. = -4.1 DEGREES REMARK 500 DG D 8 C5 - C6 - N1 ANGL. DEV. = 6.5 DEGREES REMARK 500 DG D 8 C5 - C6 - O6 ANGL. DEV. = -7.3 DEGREES REMARK 500 DG D 8 C6 - C5 - N7 ANGL. DEV. = 6.5 DEGREES REMARK 500 DG D 8 N3 - C4 - C5 ANGL. DEV. = -8.9 DEGREES REMARK 500 DG D 8 N3 - C4 - N9 ANGL. DEV. = 8.0 DEGREES REMARK 500 DG D 8 O4' - C1' - N9 ANGL. DEV. = 7.6 DEGREES REMARK 500 DG D 9 C2 - N3 - C4 ANGL. DEV. = 9.0 DEGREES REMARK 500 DG D 9 C4 - C5 - N7 ANGL. DEV. = -4.7 DEGREES REMARK 500 DG D 9 C5 - C6 - N1 ANGL. DEV. = 7.2 DEGREES REMARK 500 DG D 9 C5 - C6 - O6 ANGL. DEV. = -8.1 DEGREES REMARK 500 DG D 9 C6 - C5 - N7 ANGL. DEV. = 7.7 DEGREES REMARK 500 DG D 9 N3 - C4 - C5 ANGL. DEV. = -8.6 DEGREES REMARK 500 DG D 9 N3 - C4 - N9 ANGL. DEV. = 6.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 108 -53.25 -126.10 REMARK 500 SER A 171 132.75 -174.24 REMARK 500 ILE B 108 -54.26 -124.55 REMARK 500 SER B 171 132.45 -171.87 REMARK 500 ARG B 213 35.15 -86.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CPT C1015 PT1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CPT C1015 N1 REMARK 620 2 CPT C1015 N2 82.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CPT D1015 PT1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CPT D1015 N2 REMARK 620 2 CPT D1015 N1 80.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CPT C1016 PT1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CPT C1015 N2 REMARK 620 2 CPT C1016 N1 49.5 REMARK 620 3 CPT C1016 N2 116.2 82.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 300 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 125 SG REMARK 620 2 CYS A 103 SG 112.6 REMARK 620 3 CYS A 128 SG 112.9 105.9 REMARK 620 4 CYS A 106 SG 116.6 100.2 107.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 300 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 125 SG REMARK 620 2 CYS B 103 SG 113.3 REMARK 620 3 CYS B 106 SG 115.7 100.8 REMARK 620 4 CYS B 128 SG 112.4 109.5 104.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CPT C1015 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CPT C1016 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CPT D1015 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CPT D1016 REMARK 999 REMARK 999 SEQUENCE REMARK 999 CHAINS E,G AND CHAINS F,H DISPLAY MICROHETEROGENEITY DBREF 5A39 A 100 214 UNP P28519 RAD14_YEAST 188 302 DBREF 5A39 B 100 214 UNP P28519 RAD14_YEAST 188 302 DBREF 5A39 C 1 15 PDB 5A39 5A39 1 15 DBREF 5A39 D 1 15 PDB 5A39 5A39 1 15 DBREF 5A39 E 2 14 PDB 5A39 5A39 2 14 DBREF 5A39 F 2 14 PDB 5A39 5A39 2 14 DBREF 5A39 G 0 12 PDB 5A39 5A39 0 12 DBREF 5A39 H 0 12 PDB 5A39 5A39 0 12 SEQRES 1 A 115 ALA PRO LYS CYS ILE GLU CYS HIS ILE ASN ILE GLU MET SEQRES 2 A 115 ASP PRO VAL LEU HIS ASP VAL PHE LYS LEU GLN VAL CYS SEQRES 3 A 115 LYS GLN CYS SER LYS GLU HIS PRO GLU LYS TYR ALA LEU SEQRES 4 A 115 LEU THR LYS THR GLU CYS LYS GLU ASP TYR PHE LEU THR SEQRES 5 A 115 ASP PRO GLU LEU ASN ASP GLU ASP LEU PHE HIS ARG LEU SEQRES 6 A 115 GLU LYS PRO ASN PRO HIS SER GLY THR PHE ALA ARG MET SEQRES 7 A 115 GLN LEU PHE VAL ARG CYS GLU VAL GLU ALA PHE ALA PHE SEQRES 8 A 115 LYS LYS TRP GLY GLY GLU GLU GLY LEU ASP GLU GLU TRP SEQRES 9 A 115 GLN ARG ARG GLU GLU GLY LYS ALA HIS ARG ARG SEQRES 1 B 115 ALA PRO LYS CYS ILE GLU CYS HIS ILE ASN ILE GLU MET SEQRES 2 B 115 ASP PRO VAL LEU HIS ASP VAL PHE LYS LEU GLN VAL CYS SEQRES 3 B 115 LYS GLN CYS SER LYS GLU HIS PRO GLU LYS TYR ALA LEU SEQRES 4 B 115 LEU THR LYS THR GLU CYS LYS GLU ASP TYR PHE LEU THR SEQRES 5 B 115 ASP PRO GLU LEU ASN ASP GLU ASP LEU PHE HIS ARG LEU SEQRES 6 B 115 GLU LYS PRO ASN PRO HIS SER GLY THR PHE ALA ARG MET SEQRES 7 B 115 GLN LEU PHE VAL ARG CYS GLU VAL GLU ALA PHE ALA PHE SEQRES 8 B 115 LYS LYS TRP GLY GLY GLU GLU GLY LEU ASP GLU GLU TRP SEQRES 9 B 115 GLN ARG ARG GLU GLU GLY LYS ALA HIS ARG ARG SEQRES 1 C 15 DT DC DT DC DT DA DC DG DG DT DC DA DT SEQRES 2 C 15 DC DA SEQRES 1 D 15 DT DC DT DC DT DA DC DG DG DT DC DA DT SEQRES 2 D 15 DC DA SEQRES 1 E 13 DT DG DA DT DG DA DC DC DG DT DA DG DA SEQRES 1 F 13 DT DG DA DT DG DA DC DC DG DT DA DG DA SEQRES 1 G 13 DG DA DT DG DA DC DC DG DT DA DG DA DG SEQRES 1 H 13 DG DA DT DG DA DC DC DG DT DA DG DA DG HET ZN A 300 1 HET ZN B 300 1 HET CPT C1015 3 HET CPT C1016 3 HET CPT D1015 3 HET CPT D1016 3 HETNAM CPT CISPLATIN HETNAM ZN ZINC ION HETSYN CPT DIAMMINE(DICHLORO)PLATINUM FORMUL 7 CPT 4(CL2 H6 N2 PT) FORMUL 8 ZN 2(ZN 2+) HELIX 1 1 ASP A 113 VAL A 119 1 7 HELIX 2 2 CYS A 125 GLU A 131 1 7 HELIX 3 3 HIS A 132 ALA A 137 1 6 HELIX 4 4 LYS A 141 PHE A 149 1 9 HELIX 5 5 THR A 151 ASN A 156 1 6 HELIX 6 6 ARG A 182 GLY A 194 1 13 HELIX 7 7 GLY A 194 ARG A 213 1 20 HELIX 8 8 ASP B 113 VAL B 119 1 7 HELIX 9 9 CYS B 125 GLU B 131 1 7 HELIX 10 10 HIS B 132 ALA B 137 1 6 HELIX 11 11 LYS B 141 PHE B 149 1 9 HELIX 12 12 THR B 151 ASN B 156 1 6 HELIX 13 13 ARG B 182 GLY B 194 1 13 HELIX 14 14 GLY B 194 ARG B 213 1 20 SHEET 1 AA 3 LEU A 138 THR A 140 0 SHEET 2 AA 3 MET A 177 VAL A 181 -1 O PHE A 180 N LEU A 139 SHEET 3 AA 3 LEU A 164 LYS A 166 -1 O LEU A 164 N LEU A 179 SHEET 1 BA 3 LEU B 138 THR B 140 0 SHEET 2 BA 3 MET B 177 VAL B 181 -1 O PHE B 180 N LEU B 139 SHEET 3 BA 3 LEU B 164 LYS B 166 -1 O LEU B 164 N LEU B 179 LINK ZN ZN A 300 SG CYS A 125 1555 1555 2.19 LINK ZN ZN A 300 SG CYS A 103 1555 1555 2.24 LINK ZN ZN A 300 SG CYS A 128 1555 1555 2.29 LINK ZN ZN A 300 SG CYS A 106 1555 1555 2.31 LINK ZN ZN B 300 SG CYS B 103 1555 1555 2.66 LINK ZN ZN B 300 SG CYS B 125 1555 1555 2.66 LINK ZN ZN B 300 SG CYS B 128 1555 1555 2.66 LINK ZN ZN B 300 SG CYS B 106 1555 1555 2.66 LINK N2 CPT C1015 PT1 CPT C1016 1555 1555 2.31 LINK N2 CPT D1015 PT1 CPT D1016 1555 1555 2.04 SITE 1 AC1 4 CYS A 103 CYS A 106 CYS A 125 CYS A 128 SITE 1 AC2 4 CYS B 103 CYS B 106 CYS B 125 CYS B 128 SITE 1 AC3 5 DC C 7 DG C 8 DG C 9 DT C 10 SITE 2 AC3 5 CPT C1016 SITE 1 AC4 3 DC C 7 DG C 8 CPT C1015 SITE 1 AC5 3 CPT D1016 DC G 6 DG G 7 SITE 1 AC6 5 CPT D1015 DA G 4 DC G 5 DC G 6 SITE 2 AC6 5 DG G 7 CRYST1 54.421 54.421 130.773 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018375 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018375 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007647 0.00000 MTRIX1 1 -0.000733 1.000000 -0.000468 27.22000 1 MTRIX2 1 1.000000 0.000732 -0.002188 -27.20000 1 MTRIX3 1 -0.002188 -0.000469 -1.000000 0.10810 1