HEADER RNA BINDING PROTEIN 05-JUN-15 5A4A TITLE CRYSTAL STRUCTURE OF THE OSK DOMAIN OF DROSOPHILA OSKAR COMPND MOL_ID: 1; COMPND 2 MOLECULE: MATERNAL EFFECT PROTEIN OSKAR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: OSK DOMAIN, RESIDUES 401-606; COMPND 5 SYNONYM: OSKAR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RNA-BINDING PROTEIN, SGNH HYDROLASE, RNA BINDING, GERM PLASM, RNA KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.JESKE,S.GLATT,A.EPHRUSSI,C.W.MUELLER REVDAT 5 08-MAY-24 5A4A 1 REMARK REVDAT 4 23-AUG-17 5A4A 1 REMARK REVDAT 3 12-AUG-15 5A4A 1 JRNL REVDAT 2 29-JUL-15 5A4A 1 JRNL REVDAT 1 22-JUL-15 5A4A 0 JRNL AUTH M.JESKE,M.BORDI,S.GLATT,S.MULLER,V.RYBIN,C.W.MULLER, JRNL AUTH 2 A.EPHRUSSI JRNL TITL THE CRYSTAL STRUCTURE OF THE DROSOPHILA GERMLINE INDUCER JRNL TITL 2 OSKAR IDENTIFIES TWO DOMAINS WITH DISTINCT VASA HELICASE-AND JRNL TITL 3 RNA-BINDING ACTIVITIES. JRNL REF CELL REP. V. 12 587 2015 JRNL REFN ESSN 2211-1247 JRNL PMID 26190108 JRNL DOI 10.1016/J.CELREP.2015.06.055 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 30656 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2384 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.2219 - 4.3661 1.00 1793 156 0.1739 0.1943 REMARK 3 2 4.3661 - 3.4665 1.00 1709 143 0.1331 0.1474 REMARK 3 3 3.4665 - 3.0287 1.00 1711 140 0.1475 0.1740 REMARK 3 4 3.0287 - 2.7519 1.00 1678 141 0.1610 0.1946 REMARK 3 5 2.7519 - 2.5547 1.00 1670 140 0.1562 0.1846 REMARK 3 6 2.5547 - 2.4041 1.00 1675 146 0.1513 0.1895 REMARK 3 7 2.4041 - 2.2837 1.00 1644 137 0.1454 0.1732 REMARK 3 8 2.2837 - 2.1844 1.00 1662 140 0.1535 0.1717 REMARK 3 9 2.1844 - 2.1003 1.00 1660 138 0.1533 0.1965 REMARK 3 10 2.1003 - 2.0278 1.00 1656 138 0.1647 0.2102 REMARK 3 11 2.0278 - 1.9644 1.00 1652 142 0.1798 0.2066 REMARK 3 12 1.9644 - 1.9083 1.00 1614 139 0.1966 0.2379 REMARK 3 13 1.9083 - 1.8580 0.99 1661 136 0.2126 0.2363 REMARK 3 14 1.8580 - 1.8127 0.99 1634 139 0.2289 0.2909 REMARK 3 15 1.8127 - 1.7715 0.99 1635 136 0.2519 0.2982 REMARK 3 16 1.7715 - 1.7338 0.99 1618 142 0.2732 0.3417 REMARK 3 17 1.7338 - 1.6991 0.97 1600 131 0.2948 0.2663 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1759 REMARK 3 ANGLE : 1.046 2375 REMARK 3 CHIRALITY : 0.077 260 REMARK 3 PLANARITY : 0.004 301 REMARK 3 DIHEDRAL : 13.118 666 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 399 THROUGH 460 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.0840 19.6978 39.1085 REMARK 3 T TENSOR REMARK 3 T11: 0.1120 T22: 0.1340 REMARK 3 T33: 0.0928 T12: 0.0054 REMARK 3 T13: -0.0020 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.0979 L22: 1.1729 REMARK 3 L33: 1.5833 L12: 0.1448 REMARK 3 L13: 0.1102 L23: -0.2884 REMARK 3 S TENSOR REMARK 3 S11: 0.0296 S12: 0.0371 S13: 0.0126 REMARK 3 S21: 0.0015 S22: 0.0200 S23: 0.0954 REMARK 3 S31: 0.0467 S32: -0.2957 S33: -0.0633 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 461 THROUGH 546 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7594 27.5011 49.7764 REMARK 3 T TENSOR REMARK 3 T11: 0.1191 T22: 0.0549 REMARK 3 T33: 0.0884 T12: 0.0014 REMARK 3 T13: -0.0024 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.3279 L22: 0.8878 REMARK 3 L33: 2.0502 L12: 0.3918 REMARK 3 L13: -0.0641 L23: 0.1502 REMARK 3 S TENSOR REMARK 3 S11: 0.0212 S12: 0.0208 S13: 0.1607 REMARK 3 S21: -0.0124 S22: 0.0315 S23: 0.0476 REMARK 3 S31: -0.2796 S32: 0.0220 S33: -0.0420 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 547 THROUGH 606 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.6407 13.8188 46.7265 REMARK 3 T TENSOR REMARK 3 T11: 0.1295 T22: 0.1277 REMARK 3 T33: 0.1322 T12: 0.0380 REMARK 3 T13: -0.0225 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.5194 L22: 0.3234 REMARK 3 L33: 1.6968 L12: 0.1139 REMARK 3 L13: -0.2727 L23: 0.1819 REMARK 3 S TENSOR REMARK 3 S11: -0.0039 S12: -0.0426 S13: -0.0831 REMARK 3 S21: 0.0588 S22: 0.0421 S23: -0.1018 REMARK 3 S31: 0.2338 S32: 0.2540 S33: -0.0541 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE OCCUPANCY OF SIDE CHAIN ATOMS, FOR REMARK 3 WHICH ELECTRON DENSITY WAS POOR, IS SET TO 0. REMARK 4 REMARK 4 5A4A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1290063971. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99986 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30657 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.510 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 10.10 REMARK 200 R MERGE FOR SHELL (I) : 1.86700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.510 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.69000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 67.38000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 67.38000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.69000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 445 CZ NH1 NH2 REMARK 470 ARG A 470 CZ NH1 NH2 REMARK 470 ARG A 544 CZ NH1 NH2 REMARK 470 GLU A 562 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2175 O HOH A 2240 2.16 REMARK 500 O HOH A 2106 O HOH A 2140 2.16 REMARK 500 O HOH A 2039 O HOH A 2093 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2068 O HOH A 2094 3664 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 428 -153.82 -108.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2174 DISTANCE = 6.58 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1612 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5A48 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LOTUS DOMAIN OF DROSOPHILA OSKAR REMARK 900 RELATED ID: 5A49 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LOTUS DOMAIN (AA 139-222) OF DROSOPHILA REMARK 900 OSKAR IN C222 DBREF 5A4A A 401 606 UNP P25158 OSKA_DROME 401 606 SEQADV 5A4A GLY A 399 UNP P25158 EXPRESSION TAG SEQADV 5A4A HIS A 400 UNP P25158 EXPRESSION TAG SEQRES 1 A 208 GLY HIS THR SER GLY THR TYR ASN ASP SER LEU LEU THR SEQRES 2 A 208 ILE ASN SER ASP TYR ASP ALA TYR LEU LEU ASP PHE PRO SEQRES 3 A 208 LEU MET GLY ASP ASP PHE MET LEU TYR LEU ALA ARG MET SEQRES 4 A 208 GLU LEU LYS CYS ARG PHE ARG ARG HIS GLU ARG VAL LEU SEQRES 5 A 208 GLN SER GLY LEU CYS VAL SER GLY LEU THR ILE ASN GLY SEQRES 6 A 208 ALA ARG ASN ARG LEU LYS ARG VAL GLN LEU PRO GLU GLY SEQRES 7 A 208 THR GLN ILE ILE VAL ASN ILE GLY SER VAL ASP ILE MET SEQRES 8 A 208 ARG GLY LYS PRO LEU VAL GLN ILE GLU HIS ASP PHE ARG SEQRES 9 A 208 LEU LEU ILE LYS GLU MET HIS ASN MET ARG LEU VAL PRO SEQRES 10 A 208 ILE LEU THR ASN LEU ALA PRO LEU GLY ASN TYR CYS HIS SEQRES 11 A 208 ASP LYS VAL LEU CYS ASP LYS ILE TYR ARG PHE ASN LYS SEQRES 12 A 208 PHE ILE ARG SER GLU CYS CYS HIS LEU LYS VAL ILE ASP SEQRES 13 A 208 ILE HIS SER CYS LEU ILE ASN GLU ARG GLY VAL VAL ARG SEQRES 14 A 208 PHE ASP CYS PHE GLN ALA SER PRO ARG GLN VAL THR GLY SEQRES 15 A 208 SER LYS GLU PRO TYR LEU PHE TRP ASN LYS ILE GLY ARG SEQRES 16 A 208 GLN ARG VAL LEU GLN VAL ILE GLU THR SER LEU GLU TYR HET SO4 A1607 5 HET SO4 A1608 5 HET SO4 A1609 5 HET SO4 A1610 5 HET SO4 A1611 5 HET SO4 A1612 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 6(O4 S 2-) FORMUL 8 HOH *258(H2 O) HELIX 1 1 ASN A 406 THR A 411 5 6 HELIX 2 2 ASP A 428 LEU A 439 1 12 HELIX 3 3 THR A 460 ARG A 470 1 11 HELIX 4 4 GLY A 484 ARG A 490 1 7 HELIX 5 5 PRO A 493 MET A 511 1 19 HELIX 6 6 LEU A 523 CYS A 527 5 5 HELIX 7 7 ASP A 529 CYS A 547 1 19 HELIX 8 8 HIS A 556 LEU A 559 5 4 HELIX 9 9 ARG A 567 CYS A 570 5 4 HELIX 10 10 ASN A 589 SER A 603 1 15 SHEET 1 AA 2 TYR A 419 LEU A 420 0 SHEET 2 AA 2 PHE A 423 GLY A 427 -1 O PHE A 423 N LEU A 420 SHEET 1 AB 6 GLN A 451 SER A 452 0 SHEET 2 AB 6 LEU A 454 VAL A 456 -1 O CYS A 455 N SER A 452 SHEET 3 AB 6 PHE A 423 GLY A 427 1 O LEU A 425 N LEU A 454 SHEET 4 AB 6 GLN A 478 ASN A 482 1 O ILE A 480 N MET A 426 SHEET 5 AB 6 VAL A 514 THR A 518 1 O VAL A 514 N ILE A 479 SHEET 6 AB 6 VAL A 552 ILE A 553 1 N ILE A 553 O LEU A 517 SHEET 1 AC 4 GLN A 451 SER A 452 0 SHEET 2 AC 4 LEU A 454 VAL A 456 -1 O CYS A 455 N SER A 452 SHEET 3 AC 4 PHE A 423 GLY A 427 1 O LEU A 425 N LEU A 454 SHEET 4 AC 4 TYR A 419 LEU A 420 -1 O LEU A 420 N PHE A 423 SITE 1 AC1 9 GLN A 572 ASN A 589 LYS A 590 ARG A 593 SITE 2 AC1 9 HOH A2197 HOH A2223 HOH A2252 HOH A2253 SITE 3 AC1 9 HOH A2254 SITE 1 AC2 7 GLN A 572 ALA A 573 SER A 574 ARG A 576 SITE 2 AC2 7 HOH A2197 HOH A2201 HOH A2253 SITE 1 AC3 5 ARG A 490 SER A 581 LYS A 582 GLU A 583 SITE 2 AC3 5 HOH A2255 SITE 1 AC4 9 ASN A 406 SER A 408 ARG A 444 ARG A 445 SITE 2 AC4 9 HIS A 446 GLU A 447 HOH A2064 HOH A2065 SITE 3 AC4 9 HOH A2256 SITE 1 AC5 7 ARG A 436 ARG A 442 PHE A 443 HOH A2061 SITE 2 AC5 7 HOH A2062 HOH A2151 HOH A2257 SITE 1 AC6 4 ARG A 465 HIS A 499 LEU A 503 HOH A2076 CRYST1 68.430 68.430 101.070 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014613 0.008437 0.000000 0.00000 SCALE2 0.000000 0.016874 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009894 0.00000