HEADER VIRAL PROTEIN 17-JUL-15 5A9B TITLE CRYSTAL STRUCTURE OF BOMBYX MORI CPV1 POLYHEDRA BASE DOMAIN DELETED TITLE 2 MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYHEDRIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOMBYX MORI CYPOVIRUS 1; SOURCE 3 ORGANISM_TAXID: 110829; SOURCE 4 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 5 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS VIRAL PROTEIN, INSECT VIRUS OCCLUSION BODY, MICROCRYSTAL EXPDTA X-RAY DIFFRACTION AUTHOR X.JI,D.AXFORD,R.OWEN,G.EVANS,H.M.GINN,G.SUTTON,D.I.STUART REVDAT 3 10-JAN-24 5A9B 1 REMARK REVDAT 2 14-OCT-15 5A9B 1 JRNL REVDAT 1 02-SEP-15 5A9B 0 JRNL AUTH X.JI,D.AXFORD,R.OWEN,G.EVANS,H.M.GINN,G.SUTTON,D.I.STUART JRNL TITL POLYHEDRA STRUCTURES AND THE EVOLUTION OF THE INSECT JRNL TITL 2 VIRUSES. JRNL REF J.STRUCT.BIOL. V. 192 88 2015 JRNL REFN ISSN 1047-8477 JRNL PMID 26291392 JRNL DOI 10.1016/J.JSB.2015.08.009 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 15016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 758 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.4114 - 3.2196 0.98 2930 150 0.1657 0.1999 REMARK 3 2 3.2196 - 2.5556 0.99 2859 153 0.1732 0.2633 REMARK 3 3 2.5556 - 2.2326 0.98 2823 153 0.2057 0.2882 REMARK 3 4 2.2326 - 2.0285 0.99 2835 148 0.2297 0.3164 REMARK 3 5 2.0285 - 1.8831 0.98 2811 154 0.2777 0.3665 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.72 REMARK 3 K_SOL : 0.41 REMARK 3 B_SOL : 58.85 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.590 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1731 REMARK 3 ANGLE : 0.790 2349 REMARK 3 CHIRALITY : 0.058 244 REMARK 3 PLANARITY : 0.002 306 REMARK 3 DIHEDRAL : 13.697 630 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5A9B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1290064414. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 13 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15023 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 42.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.23000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2OH6 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 51.93000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 51.93000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 51.93000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 51.93000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 51.93000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 51.93000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 51.93000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 51.93000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 51.93000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 51.93000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 51.93000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 51.93000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 51.93000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 51.93000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 51.93000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 51.93000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 51.93000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 51.93000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 51.93000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 51.93000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 51.93000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 51.93000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 51.93000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 51.93000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 51.93000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 51.93000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 51.93000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 51.93000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 51.93000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 51.93000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 51.93000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 51.93000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 51.93000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 51.93000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 51.93000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 51.93000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 1.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2034 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2066 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 VAL A 4 REMARK 465 ALA A 5 REMARK 465 GLY A 6 REMARK 465 THR A 7 REMARK 465 ARG A 247 REMARK 465 GLN A 248 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 29 O HOH A 2016 1.98 REMARK 500 O HOH A 2069 O HOH A 2095 2.03 REMARK 500 OH TYR A 25 O HOH A 2010 2.11 REMARK 500 O HOH A 2085 O HOH A 2086 2.11 REMARK 500 CA GLY A 127 CG PRO A 133 2.12 REMARK 500 OG1 THR A 64 O HOH A 2039 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2059 O HOH A 2095 24554 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 57 -52.24 73.73 REMARK 500 GLU A 135 -129.17 57.66 REMARK 500 TYR A 224 -64.28 -121.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5A8S RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ANTHERAEA MYLITTA CPV4 POLYHEDRA TYPE 1 REMARK 900 RELATED ID: 5A8T RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ANTHERAEA MYLITTA CPV4 POLYHEDRA TYPE 2 REMARK 900 RELATED ID: 5A8U RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ORGYIA PSEUDOTSUGATA CPV5 POLYHEDRA REMARK 900 RELATED ID: 5A8V RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ORGYIA PSEUDOTSUGATA CPV5 POLYHEDRA WITH SEMET REMARK 900 SUBSTITUTION REMARK 900 RELATED ID: 5A96 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF LYMANTRIA DISPAR CPV14 POLYHEDRA REMARK 900 RELATED ID: 5A98 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TRICHOPLUSIA NI CPV15 POLYHEDRA REMARK 900 RELATED ID: 5A99 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF OPEROPHTERA BRUMATA CPV19 POLYHEDRA REMARK 900 RELATED ID: 5A9A RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SIMULIUM UBIQUITUM CPV20 POLYHEDRA REMARK 900 RELATED ID: 5A9C RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ANTHERAEA MYLITTA CPV4 POLYHEDRA BASE DOMAIN REMARK 900 DELETED MUTANT REMARK 900 RELATED ID: 5A9P RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF OPEROPHTERA BRUMATA CPV18 POLYHEDRA DBREF 5A9B A 1 248 UNP P11041 PYHD_CPVBM 1 248 SEQADV 5A9B SER A 29 UNP P11041 ASN 29 CONFLICT SEQADV 5A9B VAL A 67 UNP P11041 ALA 67 CONFLICT SEQADV 5A9B A UNP P11041 TYR 71 DELETION SEQADV 5A9B A UNP P11041 ARG 72 DELETION SEQADV 5A9B A UNP P11041 GLU 73 DELETION SEQADV 5A9B A UNP P11041 GLY 74 DELETION SEQADV 5A9B A UNP P11041 GLN 75 DELETION SEQADV 5A9B A UNP P11041 HIS 76 DELETION SEQADV 5A9B A UNP P11041 ASN 77 DELETION SEQADV 5A9B A UNP P11041 ASP 78 DELETION SEQADV 5A9B A UNP P11041 SER 79 DELETION SEQADV 5A9B A UNP P11041 TYR 80 DELETION SEQADV 5A9B A UNP P11041 ASP 81 DELETION SEQADV 5A9B A UNP P11041 GLU 82 DELETION SEQADV 5A9B A UNP P11041 TYR 83 DELETION SEQADV 5A9B A UNP P11041 GLU 84 DELETION SEQADV 5A9B A UNP P11041 VAL 85 DELETION SEQADV 5A9B A UNP P11041 ASN 86 DELETION SEQADV 5A9B A UNP P11041 GLN 87 DELETION SEQADV 5A9B A UNP P11041 SER 88 DELETION SEQADV 5A9B A UNP P11041 ILE 89 DELETION SEQADV 5A9B A UNP P11041 TYR 90 DELETION SEQADV 5A9B A UNP P11041 TYR 91 DELETION SEQADV 5A9B A UNP P11041 PRO 92 DELETION SEQADV 5A9B A UNP P11041 ASN 93 DELETION SEQADV 5A9B A UNP P11041 GLY 94 DELETION SEQADV 5A9B A UNP P11041 GLY 95 DELETION SEQADV 5A9B A UNP P11041 ASP 96 DELETION SEQADV 5A9B A UNP P11041 ALA 97 DELETION SEQADV 5A9B A UNP P11041 ARG 98 DELETION SEQADV 5A9B A UNP P11041 LYS 99 DELETION SEQADV 5A9B A UNP P11041 PHE 100 DELETION SEQADV 5A9B A UNP P11041 HIS 101 DELETION SEQADV 5A9B A UNP P11041 SER 102 DELETION SEQADV 5A9B A UNP P11041 ASN 103 DELETION SEQADV 5A9B GLY A 101 UNP P11041 INSERTION SEQADV 5A9B SER A 102 UNP P11041 INSERTION SEQADV 5A9B GLY A 103 UNP P11041 INSERTION SEQRES 1 A 218 MET ALA ASP VAL ALA GLY THR SER ASN ARG ASP PHE ARG SEQRES 2 A 218 GLY ARG GLU GLN ARG LEU PHE ASN SER GLU GLN TYR ASN SEQRES 3 A 218 TYR ASN SER SER LEU ASN GLY GLU VAL SER VAL TRP VAL SEQRES 4 A 218 TYR ALA TYR TYR SER ASP GLY SER VAL LEU VAL ILE ASN SEQRES 5 A 218 LYS ASN SER GLN TYR LYS VAL GLY ILE SER GLU THR PHE SEQRES 6 A 218 LYS VAL LEU LYS GLU GLY SER GLY ALA LYS PRO ARG ALA SEQRES 7 A 218 ILE GLN ILE ILE PHE SER PRO SER VAL ASN VAL ARG THR SEQRES 8 A 218 ILE LYS MET ALA LYS GLY ASN ALA VAL SER VAL PRO ASP SEQRES 9 A 218 GLU TYR LEU GLN ARG SER HIS PRO TRP GLU ALA THR GLY SEQRES 10 A 218 ILE LYS TYR ARG LYS ILE LYS ARG ASP GLY GLU ILE VAL SEQRES 11 A 218 GLY TYR SER HIS TYR PHE GLU LEU PRO HIS GLU TYR ASN SEQRES 12 A 218 SER ILE SER LEU ALA VAL SER GLY VAL HIS LYS ASN PRO SEQRES 13 A 218 SER SER TYR ASN VAL GLY SER ALA HIS ASN VAL MET ASP SEQRES 14 A 218 VAL PHE GLN SER CYS ASP LEU ALA LEU ARG PHE CYS ASN SEQRES 15 A 218 ARG TYR TRP ALA GLU LEU GLU LEU VAL ASN HIS TYR ILE SEQRES 16 A 218 SER PRO ASN ALA TYR PRO TYR LEU ASP ILE ASN ASN HIS SEQRES 17 A 218 SER TYR GLY VAL ALA LEU SER ASN ARG GLN FORMUL 2 HOH *101(H2 O) HELIX 1 1 ASP A 11 SER A 30 1 20 HELIX 2 2 LEU A 68 SER A 102 5 5 HELIX 3 3 ASN A 118 ILE A 122 5 5 HELIX 4 4 TYR A 136 SER A 140 5 5 HELIX 5 5 THR A 146 TYR A 150 5 5 HELIX 6 6 ASN A 196 ALA A 207 1 12 HELIX 7 7 ALA A 216 TYR A 224 1 9 SHEET 1 AA 6 ARG A 151 ARG A 155 0 SHEET 2 AA 6 GLU A 158 GLU A 167 -1 O GLU A 158 N ARG A 155 SHEET 3 AA 6 PRO A 106 PHE A 113 -1 O ILE A 109 N PHE A 166 SHEET 4 AA 6 VAL A 35 TYR A 43 -1 O TRP A 38 N ILE A 112 SHEET 5 AA 6 VAL A 48 SER A 55 -1 O LEU A 49 N ALA A 41 SHEET 6 AA 6 LEU A 208 TYR A 214 -1 O LEU A 208 N ASN A 54 SHEET 1 AB 3 LYS A 58 PHE A 65 0 SHEET 2 AB 3 ILE A 175 VAL A 182 -1 O ILE A 175 N PHE A 65 SHEET 3 AB 3 LYS A 123 GLY A 127 -1 O LYS A 123 N SER A 180 SHEET 1 AC 2 TYR A 232 LEU A 233 0 SHEET 2 AC 2 SER A 239 TYR A 240 -1 O TYR A 240 N TYR A 232 CISPEP 1 SER A 245 ASN A 246 0 0.18 CRYST1 103.860 103.860 103.860 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009628 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009628 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009628 0.00000