HEADER OXIDOREDUCTASE 22-JUL-15 5A9S TITLE NADPH COMPLEX OF IMINE REDUCTASE FROM AMYCOLATOPSIS ORIENTALIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMINE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.5.1.48; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: IMINE REDUCTASE; COMPND 8 CHAIN: B; COMPND 9 EC: 1.5.1.48; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AMYCOLATOPSIS ORIENTALIS; SOURCE 3 ORGANISM_TAXID: 31958; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PETYSBLIC-3C; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: AMYCOLATOPSIS ORIENTALIS; SOURCE 11 ORGANISM_TAXID: 31958; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 14 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PETYSBLIC-3C KEYWDS OXIDOREDUCTASE, IMINE REDUCTASE, NADPH, AMINE EXPDTA X-RAY DIFFRACTION AUTHOR H.MAN,G.ALEKU,N.J.TURNER,G.GROGAN REVDAT 3 10-JAN-24 5A9S 1 REMARK LINK REVDAT 2 25-APR-18 5A9S 1 JRNL REMARK REVDAT 1 01-JUN-16 5A9S 0 JRNL AUTH G.A.ALEKU,H.MAN,S.P.FRANCE,F.LEIPOLD,S.HUSSAIN, JRNL AUTH 2 L.TOCA-GONZALEZ,R.MARCHINGTON,S.HART,J.P.TURKENBURG, JRNL AUTH 3 G.GROGAN,N.J.TURNER JRNL TITL STEREOSELECTIVITY AND STRUCTURAL CHARACTERIZATION OF AN JRNL TITL 2 IMINE REDUCTASE (IRED) FROM AMYCOLATOPSIS ORIENTALIS JRNL REF ACS CATALYSIS V. 6 3880 2016 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/ACSCATAL.6B00782 REMARK 2 REMARK 2 RESOLUTION. 2.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0124 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 31173 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1597 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.06 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.11 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2281 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 114 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4068 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 143 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.21000 REMARK 3 B22 (A**2) : -0.52000 REMARK 3 B33 (A**2) : 2.73000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.200 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.175 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.135 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.113 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4224 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4003 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5783 ; 1.867 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9176 ; 1.544 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 566 ; 6.156 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 149 ;36.650 ;24.161 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 607 ;16.865 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;19.430 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 682 ; 0.124 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4828 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 900 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2252 ; 2.993 ; 3.267 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2251 ; 2.993 ; 3.266 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2807 ; 4.183 ; 4.879 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1972 ; 4.185 ; 3.820 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 5A9S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1290064467. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32831 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.060 REMARK 200 RESOLUTION RANGE LOW (A) : 49.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.70000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3ZGY REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M CALCIUM ACETATE, 0.1 M TRIS PH REMARK 280 9.0, 8% (W/V) PEG 550 MME, 8% (W/V) PEG 20K WITH PROTEIN AT A REMARK 280 CONCENTRATION OF 20 MG PER ML, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.39500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.94000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.03000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.94000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.39500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.03000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -110.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 TYR A 72 REMARK 465 ASP A 73 REMARK 465 ALA A 74 REMARK 465 GLU A 228 REMARK 465 GLY A 229 REMARK 465 VAL A 230 REMARK 465 TYR A 231 REMARK 465 PRO A 232 REMARK 465 GLY A 233 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ASP B 3 REMARK 465 GLN B 4 REMARK 465 TYR B 72 REMARK 465 GLU B 228 REMARK 465 GLY B 229 REMARK 465 VAL B 230 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 47 CE NZ REMARK 470 ARG A 50 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 83 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 84 CD OE1 OE2 REMARK 470 LYS A 100 NZ REMARK 470 ARG A 107 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 239 CG CD OE1 OE2 REMARK 470 GLU A 279 CG CD OE1 OE2 REMARK 470 ASN B 5 CG OD1 ND2 REMARK 470 LEU B 6 CG CD1 CD2 REMARK 470 LYS B 40 CE NZ REMARK 470 ARG B 50 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 53 CG OD1 OD2 REMARK 470 ARG B 63 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 87 CD NE CZ NH1 NH2 REMARK 470 LYS B 100 CG CD CE NZ REMARK 470 LYS B 148 CD CE NZ REMARK 470 GLU B 149 CG CD OE1 OE2 REMARK 470 ASP B 227 CG OD1 OD2 REMARK 470 GLU B 239 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 140 OE2 GLU A 201 1455 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 63 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 271 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 MET B 127 CG - SD - CE ANGL. DEV. = 11.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 6 126.02 -38.10 REMARK 500 ASN A 95 43.45 -143.28 REMARK 500 SER A 140 124.93 -38.35 REMARK 500 GLU A 279 -16.51 68.19 REMARK 500 LEU B 6 70.37 43.45 REMARK 500 ARG B 83 -119.38 43.97 REMARK 500 SER B 96 139.26 -29.59 REMARK 500 PRO B 232 66.61 -116.37 REMARK 500 ASP B 234 147.69 -170.77 REMARK 500 VAL B 285 -38.32 -39.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 500 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 220 O REMARK 620 2 ALA A 221 O 85.3 REMARK 620 3 ALA A 223 O 100.1 105.7 REMARK 620 4 ILE A 226 O 99.1 156.3 96.5 REMARK 620 5 HOH A2061 O 162.8 79.3 91.6 92.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 500 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS B 220 O REMARK 620 2 ALA B 221 O 81.2 REMARK 620 3 ALA B 223 O 93.5 102.3 REMARK 620 4 ILE B 226 O 97.7 161.9 95.8 REMARK 620 5 HOH B2048 O 93.5 83.4 171.6 78.6 REMARK 620 6 HOH B2049 O 165.3 84.1 89.0 96.5 85.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5A9R RELATED DB: PDB REMARK 900 APO FORM OF IMINE REDUCTASE FROM AMYCOLATOPSIS ORIENTALIS REMARK 900 RELATED ID: 5A9T RELATED DB: PDB REMARK 900 IMINE REDUCTASE FROM AMYCOLATOPSIS ORIENTALIS IN COMPLEX WITH (R)- REMARK 900 METHYLTETRAHYDROISOQUINOLINE DBREF 5A9S A 1 290 UNP R4SNK4 R4SNK4_AMYOR 1 290 DBREF 5A9S B 1 290 UNP R4SNK4 R4SNK4_AMYOR 1 290 SEQADV 5A9S GLN B 222 UNP R4SNK4 GLU 222 CONFLICT SEQRES 1 A 290 MET THR ASP GLN ASN LEU PRO VAL THR VAL ALA GLY LEU SEQRES 2 A 290 GLY PRO MET GLY SER ALA LEU ALA ALA ALA LEU LEU ASP SEQRES 3 A 290 ARG GLY HIS ASP VAL THR VAL TRP ASN ARG SER PRO GLY SEQRES 4 A 290 LYS ALA ALA PRO LEU VAL ALA LYS GLY ALA ARG GLN ALA SEQRES 5 A 290 ASP ASP ILE VAL ASP ALA VAL SER ALA SER ARG LEU LEU SEQRES 6 A 290 VAL VAL CYS LEU ALA ASP TYR ASP ALA LEU TYR SER ALA SEQRES 7 A 290 LEU GLY PRO ALA ARG GLU ALA LEU ARG GLY ARG VAL VAL SEQRES 8 A 290 VAL ASN LEU ASN SER GLY THR PRO LYS GLU ALA ASN GLU SEQRES 9 A 290 ALA LEU ARG TRP ALA GLU ARG HIS GLY THR GLY TYR LEU SEQRES 10 A 290 ASP GLY ALA ILE MET VAL PRO PRO ALA MET VAL GLY HIS SEQRES 11 A 290 PRO GLY SER VAL PHE LEU TYR SER GLY SER ALA GLU VAL SEQRES 12 A 290 PHE GLU GLU TYR LYS GLU THR LEU ALA GLY LEU GLY ASP SEQRES 13 A 290 PRO VAL HIS LEU GLY THR GLU ALA GLY LEU ALA VAL LEU SEQRES 14 A 290 TYR ASN THR ALA LEU LEU SER MET MET TYR SER SER MET SEQRES 15 A 290 ASN GLY PHE LEU HIS ALA ALA ALA LEU VAL GLY SER ALA SEQRES 16 A 290 GLY VAL PRO ALA ALA GLU PHE THR LYS LEU ALA VAL ASP SEQRES 17 A 290 TRP PHE LEU PRO ALA VAL ILE GLY GLN ILE ILE LYS ALA SEQRES 18 A 290 GLU ALA PRO THR ILE ASP GLU GLY VAL TYR PRO GLY ASP SEQRES 19 A 290 ALA GLY SER LEU GLU MET ASN VAL THR THR LEU LYS HIS SEQRES 20 A 290 ILE ILE GLY THR SER GLN GLU GLN GLY VAL ASP THR GLU SEQRES 21 A 290 ILE PRO VAL ARG ASN LYS GLU LEU LEU ASP ARG ALA VAL SEQRES 22 A 290 ALA ALA GLY PHE GLY GLU SER SER TYR TYR SER VAL ILE SEQRES 23 A 290 GLU LEU TRP ARG SEQRES 1 B 290 MET THR ASP GLN ASN LEU PRO VAL THR VAL ALA GLY LEU SEQRES 2 B 290 GLY PRO MET GLY SER ALA LEU ALA ALA ALA LEU LEU ASP SEQRES 3 B 290 ARG GLY HIS ASP VAL THR VAL TRP ASN ARG SER PRO GLY SEQRES 4 B 290 LYS ALA ALA PRO LEU VAL ALA LYS GLY ALA ARG GLN ALA SEQRES 5 B 290 ASP ASP ILE VAL ASP ALA VAL SER ALA SER ARG LEU LEU SEQRES 6 B 290 VAL VAL CYS LEU ALA ASP TYR ASP ALA LEU TYR SER ALA SEQRES 7 B 290 LEU GLY PRO ALA ARG GLU ALA LEU ARG GLY ARG VAL VAL SEQRES 8 B 290 VAL ASN LEU ASN SER GLY THR PRO LYS GLU ALA ASN GLU SEQRES 9 B 290 ALA LEU ARG TRP ALA GLU ARG HIS GLY THR GLY TYR LEU SEQRES 10 B 290 ASP GLY ALA ILE MET VAL PRO PRO ALA MET VAL GLY HIS SEQRES 11 B 290 PRO GLY SER VAL PHE LEU TYR SER GLY SER ALA GLU VAL SEQRES 12 B 290 PHE GLU GLU TYR LYS GLU THR LEU ALA GLY LEU GLY ASP SEQRES 13 B 290 PRO VAL HIS LEU GLY THR GLU ALA GLY LEU ALA VAL LEU SEQRES 14 B 290 TYR ASN THR ALA LEU LEU SER MET MET TYR SER SER MET SEQRES 15 B 290 ASN GLY PHE LEU HIS ALA ALA ALA LEU VAL GLY SER ALA SEQRES 16 B 290 GLY VAL PRO ALA ALA GLU PHE THR LYS LEU ALA VAL ASP SEQRES 17 B 290 TRP PHE LEU PRO ALA VAL ILE GLY GLN ILE ILE LYS ALA SEQRES 18 B 290 GLN ALA PRO THR ILE ASP GLU GLY VAL TYR PRO GLY ASP SEQRES 19 B 290 ALA GLY SER LEU GLU MET ASN VAL THR THR LEU LYS HIS SEQRES 20 B 290 ILE ILE GLY THR SER GLN GLU GLN GLY VAL ASP THR GLU SEQRES 21 B 290 ILE PRO VAL ARG ASN LYS GLU LEU LEU ASP ARG ALA VAL SEQRES 22 B 290 ALA ALA GLY PHE GLY GLU SER SER TYR TYR SER VAL ILE SEQRES 23 B 290 GLU LEU TRP ARG HET CA A 500 1 HET NAP A1000 48 HET CA B 500 1 HETNAM CA CALCIUM ION HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 CA 2(CA 2+) FORMUL 4 NAP C21 H28 N7 O17 P3 FORMUL 6 HOH *143(H2 O) HELIX 1 1 GLY A 14 ARG A 27 1 14 HELIX 2 2 ALA A 41 LYS A 47 1 7 HELIX 3 3 ASP A 54 ALA A 61 1 8 HELIX 4 4 LEU A 75 GLY A 80 1 6 HELIX 5 5 PRO A 81 ARG A 87 5 7 HELIX 6 6 THR A 98 HIS A 112 1 15 HELIX 7 7 PRO A 124 VAL A 128 5 5 HELIX 8 8 SER A 140 GLY A 153 1 14 HELIX 9 9 GLY A 165 SER A 194 1 30 HELIX 10 10 PRO A 198 TRP A 209 1 12 HELIX 11 11 TRP A 209 VAL A 214 1 6 HELIX 12 12 VAL A 214 ALA A 223 1 10 HELIX 13 13 SER A 237 GLY A 256 1 20 HELIX 14 14 THR A 259 ALA A 275 1 17 HELIX 15 15 SER A 281 ARG A 290 5 10 HELIX 16 16 GLY B 14 ARG B 27 1 14 HELIX 17 17 SER B 37 LYS B 40 5 4 HELIX 18 18 ALA B 41 LYS B 47 1 7 HELIX 19 19 ASP B 54 ALA B 61 1 8 HELIX 20 20 ASP B 73 GLY B 80 1 8 HELIX 21 21 PRO B 81 ARG B 87 5 7 HELIX 22 22 THR B 98 HIS B 112 1 15 HELIX 23 23 PRO B 124 VAL B 128 5 5 HELIX 24 24 SER B 140 GLY B 153 1 14 HELIX 25 25 GLY B 165 SER B 194 1 30 HELIX 26 26 PRO B 198 TRP B 209 1 12 HELIX 27 27 TRP B 209 VAL B 214 1 6 HELIX 28 28 VAL B 214 ALA B 223 1 10 HELIX 29 29 SER B 237 GLY B 256 1 20 HELIX 30 30 THR B 259 GLY B 276 1 18 HELIX 31 31 SER B 281 ARG B 290 5 10 SHEET 1 AA 8 ARG A 50 GLN A 51 0 SHEET 2 AA 8 VAL A 31 TRP A 34 1 O VAL A 31 N ARG A 50 SHEET 3 AA 8 VAL A 8 ALA A 11 1 O VAL A 8 N THR A 32 SHEET 4 AA 8 LEU A 64 VAL A 67 1 O LEU A 64 N THR A 9 SHEET 5 AA 8 VAL A 90 ASN A 93 1 O VAL A 90 N LEU A 65 SHEET 6 AA 8 GLY A 115 ILE A 121 1 O GLY A 115 N VAL A 91 SHEET 7 AA 8 VAL A 134 GLY A 139 -1 O LEU A 136 N ALA A 120 SHEET 8 AA 8 ASP A 156 HIS A 159 1 O ASP A 156 N PHE A 135 SHEET 1 BA 8 ARG B 50 GLN B 51 0 SHEET 2 BA 8 VAL B 31 TRP B 34 1 O VAL B 31 N ARG B 50 SHEET 3 BA 8 VAL B 8 ALA B 11 1 O VAL B 8 N THR B 32 SHEET 4 BA 8 LEU B 64 VAL B 67 1 O LEU B 64 N THR B 9 SHEET 5 BA 8 VAL B 90 ASN B 93 1 O VAL B 90 N LEU B 65 SHEET 6 BA 8 GLY B 115 ILE B 121 1 O GLY B 115 N VAL B 91 SHEET 7 BA 8 VAL B 134 GLY B 139 -1 O LEU B 136 N ALA B 120 SHEET 8 BA 8 ASP B 156 HIS B 159 1 O ASP B 156 N PHE B 135 LINK O LYS A 220 CA CA A 500 1555 1555 2.46 LINK O ALA A 221 CA CA A 500 1555 1555 2.52 LINK O ALA A 223 CA CA A 500 1555 1555 2.31 LINK O ILE A 226 CA CA A 500 1555 1555 2.34 LINK CA CA A 500 O HOH A2061 1555 1555 2.57 LINK O LYS B 220 CA CA B 500 1555 1555 2.63 LINK O ALA B 221 CA CA B 500 1555 1555 2.58 LINK O ALA B 223 CA CA B 500 1555 1555 2.41 LINK O ILE B 226 CA CA B 500 1555 1555 2.29 LINK CA CA B 500 O HOH B2048 1555 1555 2.76 LINK CA CA B 500 O HOH B2049 1555 1555 2.66 CISPEP 1 PRO B 232 GLY B 233 0 0.76 SITE 1 AC1 21 GLY A 12 LEU A 13 GLY A 14 PRO A 15 SITE 2 AC1 21 MET A 16 GLY A 17 ASN A 35 ARG A 36 SITE 3 AC1 21 SER A 37 LYS A 40 CYS A 68 LEU A 69 SITE 4 AC1 21 ALA A 70 ASN A 95 ILE A 121 VAL A 123 SITE 5 AC1 21 PRO A 125 HOH A2012 HOH A2018 HOH A2020 SITE 6 AC1 21 MET B 240 SITE 1 AC2 6 LYS B 220 ALA B 221 ALA B 223 ILE B 226 SITE 2 AC2 6 HOH B2048 HOH B2049 SITE 1 AC3 5 LYS A 220 ALA A 221 ALA A 223 ILE A 226 SITE 2 AC3 5 HOH A2061 CRYST1 52.790 66.060 147.880 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018943 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015138 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006762 0.00000 MTRIX1 1 -0.999900 0.009316 -0.009296 91.78000 MTRIX2 1 0.000091 -0.701400 -0.712700 20.87000 MTRIX3 1 -0.013160 -0.712700 0.701400 9.24900