HEADER ISOMERASE 12-AUG-15 5AC6 TITLE S.ENTERICA HISA MUTANT D10G, DUP13-15, Q24L, G102A COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO) COMPND 3 METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: PHOSPHORIBOSYLFORMIMINO-5-AMINOIMIDAZOLE CARBOXAMIDE COMPND 6 RIBOTIDE ISOMERASE; COMPND 7 EC: 5.3.1.16; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA; SOURCE 3 ORGANISM_TAXID: 28901; SOURCE 4 GENE: HISA, AIY46_13150, AL463_17045, CQW68_13095, D3346_17640, SOURCE 5 D3Q81_15095, EAW95_14430, FJR52_10950, GCH85_22590, NCTC6385_02080, SOURCE 6 ND68_15100; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PEXP5-CT KEYWDS ISOMERASE, HISA, PROTEIN EVOLUTION, IAD MODEL, TRPF EXPDTA X-RAY DIFFRACTION AUTHOR X.GUO,A.SODERHOLM,M.NEWTON,J.NASVALL,D.ANDERSSON,W.PATRICK,M.SELMER REVDAT 2 10-JAN-24 5AC6 1 COMPND SOURCE REMARK DBREF REVDAT 2 2 1 SEQADV SHEET REVDAT 1 28-SEP-16 5AC6 0 JRNL AUTH M.NEWTON,X.GUO,A.SODERHOLM,J.NASVALL,D.ANDERSSON,W.PATRICK, JRNL AUTH 2 M.SELMER JRNL TITL THE PROTEIN STRUCTURES, FUNCTIONS AND DYNAMICS OF ADAPTIVE JRNL TITL 2 EVOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 18219 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.5695 - 3.8110 1.00 2680 128 0.1600 0.1765 REMARK 3 2 3.8110 - 3.0251 1.00 2475 154 0.1767 0.2314 REMARK 3 3 3.0251 - 2.6427 1.00 2461 134 0.2026 0.2569 REMARK 3 4 2.6427 - 2.4011 1.00 2435 135 0.2101 0.3266 REMARK 3 5 2.4011 - 2.2290 1.00 2442 112 0.2114 0.2468 REMARK 3 6 2.2290 - 2.0976 1.00 2408 140 0.2384 0.2976 REMARK 3 7 2.0976 - 1.9926 0.99 2389 126 0.2688 0.3101 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1870 REMARK 3 ANGLE : 1.260 2555 REMARK 3 CHIRALITY : 0.062 306 REMARK 3 PLANARITY : 0.004 332 REMARK 3 DIHEDRAL : 13.697 679 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:14) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4052 31.2976 -7.9107 REMARK 3 T TENSOR REMARK 3 T11: 0.2228 T22: 0.1713 REMARK 3 T33: 0.2492 T12: -0.0237 REMARK 3 T13: 0.0184 T23: 0.0358 REMARK 3 L TENSOR REMARK 3 L11: 6.1597 L22: 1.6397 REMARK 3 L33: 8.6886 L12: -1.7893 REMARK 3 L13: 6.7138 L23: -2.0893 REMARK 3 S TENSOR REMARK 3 S11: -0.5964 S12: 0.1451 S13: 0.2541 REMARK 3 S21: 0.0133 S22: 0.2609 S23: 0.1328 REMARK 3 S31: -0.6577 S32: -0.2166 S33: 0.4463 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 15:25) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7602 38.9833 -1.0030 REMARK 3 T TENSOR REMARK 3 T11: 0.7595 T22: 0.8913 REMARK 3 T33: 0.8001 T12: -0.0289 REMARK 3 T13: 0.1693 T23: -0.2923 REMARK 3 L TENSOR REMARK 3 L11: 4.0227 L22: 9.7584 REMARK 3 L33: 6.9781 L12: -4.0378 REMARK 3 L13: 5.2966 L23: -5.1710 REMARK 3 S TENSOR REMARK 3 S11: 0.0037 S12: 1.9806 S13: -1.3602 REMARK 3 S21: 1.6275 S22: -0.8019 S23: 0.5467 REMARK 3 S31: -0.0806 S32: -0.5015 S33: 0.6758 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 26:30) REMARK 3 ORIGIN FOR THE GROUP (A): 5.9560 39.5685 -13.3396 REMARK 3 T TENSOR REMARK 3 T11: 0.3196 T22: 0.4137 REMARK 3 T33: 0.8139 T12: -0.0505 REMARK 3 T13: -0.0155 T23: 0.1481 REMARK 3 L TENSOR REMARK 3 L11: 8.9582 L22: 5.9569 REMARK 3 L33: 5.6286 L12: -2.6419 REMARK 3 L13: -2.1523 L23: 5.6835 REMARK 3 S TENSOR REMARK 3 S11: 0.3059 S12: 0.2726 S13: 1.9945 REMARK 3 S21: -0.3387 S22: 0.3543 S23: 0.9172 REMARK 3 S31: -0.5022 S32: -0.5047 S33: -0.6394 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 31:48) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1925 28.8260 -12.1986 REMARK 3 T TENSOR REMARK 3 T11: 0.2696 T22: 0.1607 REMARK 3 T33: 0.1890 T12: -0.0322 REMARK 3 T13: 0.0382 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 4.2409 L22: 1.0887 REMARK 3 L33: 0.9266 L12: 0.5487 REMARK 3 L13: 0.8068 L23: 0.9313 REMARK 3 S TENSOR REMARK 3 S11: -0.2601 S12: 0.0713 S13: 0.1263 REMARK 3 S21: -0.1162 S22: 0.1367 S23: -0.0273 REMARK 3 S31: -0.2104 S32: 0.0704 S33: 0.1180 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 49:61) REMARK 3 ORIGIN FOR THE GROUP (A): -5.9644 28.0107 -9.6837 REMARK 3 T TENSOR REMARK 3 T11: 0.2552 T22: 0.4441 REMARK 3 T33: 0.4751 T12: 0.0224 REMARK 3 T13: 0.0050 T23: 0.0853 REMARK 3 L TENSOR REMARK 3 L11: 2.0648 L22: 5.2432 REMARK 3 L33: 3.2382 L12: -0.5751 REMARK 3 L13: 1.2030 L23: 3.1828 REMARK 3 S TENSOR REMARK 3 S11: 0.0052 S12: -0.4683 S13: 0.0185 REMARK 3 S21: 0.4309 S22: 0.2068 S23: 1.2014 REMARK 3 S31: 0.2434 S32: -1.2057 S33: -0.1159 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 62:82) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6117 23.2403 -14.3531 REMARK 3 T TENSOR REMARK 3 T11: 0.2396 T22: 0.1492 REMARK 3 T33: 0.1681 T12: -0.0232 REMARK 3 T13: -0.0146 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 8.3407 L22: 4.3002 REMARK 3 L33: 2.8981 L12: -2.2029 REMARK 3 L13: -0.5757 L23: 1.0267 REMARK 3 S TENSOR REMARK 3 S11: 0.0467 S12: 0.2755 S13: -0.0276 REMARK 3 S21: -0.3805 S22: -0.0217 S23: 0.2540 REMARK 3 S31: -0.2147 S32: -0.0098 S33: -0.0377 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 83:99) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4772 16.3330 -9.6586 REMARK 3 T TENSOR REMARK 3 T11: 0.2034 T22: 0.2040 REMARK 3 T33: 0.1939 T12: 0.0075 REMARK 3 T13: 0.0124 T23: -0.0298 REMARK 3 L TENSOR REMARK 3 L11: 2.1424 L22: 4.3532 REMARK 3 L33: 9.3520 L12: 1.3017 REMARK 3 L13: -2.6976 L23: -1.9188 REMARK 3 S TENSOR REMARK 3 S11: -0.0487 S12: 0.2147 S13: -0.1160 REMARK 3 S21: -0.0707 S22: -0.0574 S23: 0.2857 REMARK 3 S31: -0.1999 S32: -0.4687 S33: 0.1094 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 100:128) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9416 13.4863 0.1253 REMARK 3 T TENSOR REMARK 3 T11: 0.1946 T22: 0.1404 REMARK 3 T33: 0.1750 T12: 0.0018 REMARK 3 T13: 0.0372 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 6.3060 L22: 4.3038 REMARK 3 L33: 3.8223 L12: -2.1811 REMARK 3 L13: -1.0845 L23: 1.0569 REMARK 3 S TENSOR REMARK 3 S11: -0.2181 S12: -0.0338 S13: -0.4458 REMARK 3 S21: 0.0381 S22: 0.1413 S23: 0.1454 REMARK 3 S31: 0.1969 S32: 0.0383 S33: 0.0723 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 129:140) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0392 26.5419 17.3752 REMARK 3 T TENSOR REMARK 3 T11: 0.3528 T22: 0.3541 REMARK 3 T33: 0.2859 T12: 0.0641 REMARK 3 T13: -0.0031 T23: -0.0385 REMARK 3 L TENSOR REMARK 3 L11: 3.1429 L22: 5.7369 REMARK 3 L33: 5.2725 L12: -1.5668 REMARK 3 L13: 4.0638 L23: -2.1628 REMARK 3 S TENSOR REMARK 3 S11: -0.3560 S12: -0.5199 S13: 0.3229 REMARK 3 S21: 0.7467 S22: 0.2638 S23: 0.2159 REMARK 3 S31: -0.4168 S32: -0.1717 S33: 0.0838 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 141:161) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5368 20.8971 11.2262 REMARK 3 T TENSOR REMARK 3 T11: 0.1685 T22: 0.2022 REMARK 3 T33: 0.2266 T12: 0.0161 REMARK 3 T13: 0.0309 T23: 0.0647 REMARK 3 L TENSOR REMARK 3 L11: 6.0141 L22: 7.7249 REMARK 3 L33: 4.2135 L12: -2.8334 REMARK 3 L13: -3.1164 L23: 4.7476 REMARK 3 S TENSOR REMARK 3 S11: -0.0640 S12: -0.0779 S13: -0.0344 REMARK 3 S21: 0.0817 S22: 0.0971 S23: 0.3539 REMARK 3 S31: -0.0543 S32: -0.1270 S33: -0.0232 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 162:178) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8605 23.2675 6.1044 REMARK 3 T TENSOR REMARK 3 T11: 0.2757 T22: 0.2143 REMARK 3 T33: 0.2139 T12: 0.0034 REMARK 3 T13: 0.0349 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 6.7587 L22: 1.9127 REMARK 3 L33: 4.5923 L12: 2.6935 REMARK 3 L13: 0.2290 L23: -0.8124 REMARK 3 S TENSOR REMARK 3 S11: -0.0400 S12: -0.1675 S13: 0.6707 REMARK 3 S21: -0.1491 S22: 0.0423 S23: -0.1475 REMARK 3 S31: -0.7791 S32: 0.1290 S33: -0.0139 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 179:185) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9400 32.5624 10.9473 REMARK 3 T TENSOR REMARK 3 T11: 0.7427 T22: 0.5554 REMARK 3 T33: 0.5361 T12: 0.1288 REMARK 3 T13: 0.1746 T23: 0.0273 REMARK 3 L TENSOR REMARK 3 L11: 4.8029 L22: 4.4034 REMARK 3 L33: 9.3292 L12: -2.5769 REMARK 3 L13: 1.4495 L23: -5.9345 REMARK 3 S TENSOR REMARK 3 S11: 0.0645 S12: 1.0394 S13: 0.0659 REMARK 3 S21: 1.3918 S22: 0.0799 S23: 0.4445 REMARK 3 S31: -1.4345 S32: -1.7259 S33: -0.2139 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN A AND RESID 186:202) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4909 18.5470 10.8203 REMARK 3 T TENSOR REMARK 3 T11: 0.2342 T22: 0.2605 REMARK 3 T33: 0.1616 T12: 0.0286 REMARK 3 T13: -0.0031 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 3.5974 L22: 8.8886 REMARK 3 L33: 2.5746 L12: -1.3221 REMARK 3 L13: -0.4984 L23: -4.4042 REMARK 3 S TENSOR REMARK 3 S11: -0.1983 S12: -0.6052 S13: 0.2043 REMARK 3 S21: 0.5556 S22: 0.3415 S23: -0.1120 REMARK 3 S31: -0.5658 S32: 0.1395 S33: -0.1030 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN A AND RESID 203:213) REMARK 3 ORIGIN FOR THE GROUP (A): 19.0623 34.2983 5.0066 REMARK 3 T TENSOR REMARK 3 T11: 0.4376 T22: 0.3090 REMARK 3 T33: 0.2093 T12: -0.1438 REMARK 3 T13: 0.0517 T23: -0.0549 REMARK 3 L TENSOR REMARK 3 L11: 5.4312 L22: 7.0674 REMARK 3 L33: 5.2019 L12: -0.9370 REMARK 3 L13: -2.5393 L23: -1.3770 REMARK 3 S TENSOR REMARK 3 S11: 0.8504 S12: -0.6555 S13: 0.2963 REMARK 3 S21: 1.0094 S22: -0.5190 S23: 0.0795 REMARK 3 S31: -0.6043 S32: 0.6530 S33: -0.3115 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN A AND RESID 214:235) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9814 30.5110 0.3709 REMARK 3 T TENSOR REMARK 3 T11: 0.2123 T22: 0.1870 REMARK 3 T33: 0.1770 T12: -0.0197 REMARK 3 T13: 0.0254 T23: -0.0342 REMARK 3 L TENSOR REMARK 3 L11: 3.8316 L22: 5.7053 REMARK 3 L33: 3.4886 L12: 1.2948 REMARK 3 L13: -0.3006 L23: -4.3435 REMARK 3 S TENSOR REMARK 3 S11: 0.1262 S12: -0.2812 S13: -0.0311 REMARK 3 S21: 0.4088 S22: -0.0032 S23: 0.0972 REMARK 3 S31: -0.3384 S32: 0.1092 S33: -0.1091 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN A AND RESID 236:244) REMARK 3 ORIGIN FOR THE GROUP (A): 25.4978 28.6152 -1.8193 REMARK 3 T TENSOR REMARK 3 T11: 0.2713 T22: 0.2669 REMARK 3 T33: 0.2797 T12: -0.0443 REMARK 3 T13: -0.0167 T23: 0.0497 REMARK 3 L TENSOR REMARK 3 L11: 7.3604 L22: 5.1448 REMARK 3 L33: 5.0816 L12: 4.7520 REMARK 3 L13: -4.5607 L23: -5.1066 REMARK 3 S TENSOR REMARK 3 S11: 0.1866 S12: -0.4576 S13: -0.7042 REMARK 3 S21: 0.5096 S22: -0.4629 S23: -0.6917 REMARK 3 S31: -0.1272 S32: 0.9491 S33: 0.3584 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES 16-21 AND 245-256 ARE REMARK 3 DISORDERED REMARK 4 REMARK 4 5AC6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1290064676. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.872600 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18270 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 23.80 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 19.20 REMARK 200 R MERGE FOR SHELL (I) : 0.92000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 5AHF REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CHLORIDE, 0.1 M BIS-TRIS REMARK 280 PH5.5, 25% W/V PEG 3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.99533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 79.99067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 59.99300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 99.98833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 19.99767 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 39.99533 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 79.99067 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 99.98833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 59.99300 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 19.99767 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 16 REMARK 465 HIS A 17 REMARK 465 GLN A 18 REMARK 465 GLY A 19 REMARK 465 ASP A 20 REMARK 465 TYR A 21 REMARK 465 VAL A 245 REMARK 465 LYS A 246 REMARK 465 GLY A 247 REMARK 465 HIS A 248 REMARK 465 HIS A 249 REMARK 465 HIS A 250 REMARK 465 HIS A 251 REMARK 465 HIS A 252 REMARK 465 HIS A 253 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 15C CG CD NE CZ NH1 NH2 REMARK 470 ARG A 23 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 25 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 158 OH TYR A 194 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 15 C VAL A 15A N -0.220 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 73.13 -118.51 REMARK 500 ALA A 102 -97.67 -107.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1246 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ABT RELATED DB: PDB REMARK 900 S. ENTERICA HISA WITH MUTATIONS D7N, G102A, V106M, D176A REMARK 900 RELATED ID: 5AC7 RELATED DB: PDB REMARK 900 S. ENTERICA HISA WITH MUTATIONS D7N, D10G, DUP13-15, Q24L, G102A REMARK 900 RELATED ID: 5AC8 RELATED DB: PDB REMARK 900 S. ENTERICA HISA WITH MUTATIONS D10G, DUP13-15, G102A REMARK 900 RELATED ID: 5ACD RELATED DB: PDB REMARK 900 S. ENTERICA HISA WITH MUTATIONS D10G, DUP13-15, G102A DBREF1 5AC6 A 1 245 UNP A0A630AQ07_SALER DBREF2 5AC6 A A0A630AQ07 1 245 SEQADV 5AC6 GLY A 10 UNP A0A630AQ0 ASP 10 ENGINEERED MUTATION SEQADV 5AC6 VAL A 15A UNP A0A630AQ0 INSERTION SEQADV 5AC6 VAL A 15B UNP A0A630AQ0 INSERTION SEQADV 5AC6 ARG A 15C UNP A0A630AQ0 INSERTION SEQADV 5AC6 LEU A 24 UNP A0A630AQ0 GLN 24 ENGINEERED MUTATION SEQADV 5AC6 LEU A 101 UNP A0A630AQ0 ILE 101 CONFLICT SEQADV 5AC6 ALA A 102 UNP A0A630AQ0 GLY 102 ENGINEERED MUTATION SEQADV 5AC6 ASP A 183 UNP A0A630AQ0 ASN 183 CONFLICT SEQADV 5AC6 LYS A 246 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AC6 GLY A 247 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AC6 HIS A 248 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AC6 HIS A 249 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AC6 HIS A 250 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AC6 HIS A 251 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AC6 HIS A 252 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AC6 HIS A 253 UNP A0A630AQ0 EXPRESSION TAG SEQRES 1 A 256 MET ILE ILE PRO ALA LEU ASP LEU ILE GLY GLY THR VAL SEQRES 2 A 256 VAL ARG VAL VAL ARG LEU HIS GLN GLY ASP TYR ALA ARG SEQRES 3 A 256 LEU ARG ASP TYR GLY ASN ASP PRO LEU PRO ARG LEU GLN SEQRES 4 A 256 ASP TYR ALA ALA GLN GLY ALA GLY VAL LEU HIS LEU VAL SEQRES 5 A 256 ASP LEU THR GLY ALA LYS ASP PRO ALA LYS ARG GLN ILE SEQRES 6 A 256 PRO LEU ILE LYS THR LEU VAL ALA GLY VAL ASN VAL PRO SEQRES 7 A 256 VAL GLN VAL GLY GLY GLY VAL ARG THR GLU GLU ASP VAL SEQRES 8 A 256 ALA ALA LEU LEU LYS ALA GLY VAL ALA ARG VAL VAL LEU SEQRES 9 A 256 ALA SER THR ALA VAL LYS SER PRO ASP VAL VAL LYS GLY SEQRES 10 A 256 TRP PHE GLU ARG PHE GLY ALA GLN ALA LEU VAL LEU ALA SEQRES 11 A 256 LEU ASP VAL ARG ILE ASP GLU HIS GLY THR LYS GLN VAL SEQRES 12 A 256 ALA VAL SER GLY TRP GLN GLU ASN SER GLY VAL SER LEU SEQRES 13 A 256 GLU GLN LEU VAL GLU THR TYR LEU PRO VAL GLY LEU LYS SEQRES 14 A 256 HIS VAL LEU CYS THR ASP ILE SER ARG ASP GLY THR LEU SEQRES 15 A 256 ALA GLY SER ASP VAL SER LEU TYR GLU GLU VAL CYS ALA SEQRES 16 A 256 ARG TYR PRO GLN ILE ALA PHE GLN SER SER GLY GLY ILE SEQRES 17 A 256 GLY ASP ILE ASP ASP ILE ALA ALA LEU ARG GLY THR GLY SEQRES 18 A 256 VAL ARG GLY VAL ILE VAL GLY ARG ALA LEU LEU GLU GLY SEQRES 19 A 256 LYS PHE THR VAL LYS GLU ALA ILE GLN CYS TRP GLN ASN SEQRES 20 A 256 VAL LYS GLY HIS HIS HIS HIS HIS HIS HET SO4 A1245 5 HET SO4 A1246 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 HOH *96(H2 O) HELIX 1 1 ASP A 30 GLN A 41 1 12 HELIX 2 2 LEU A 51 ASP A 56 1 6 HELIX 3 3 PRO A 57 ARG A 60 5 4 HELIX 4 4 GLN A 61 VAL A 72 1 12 HELIX 5 5 THR A 84 ALA A 94 1 11 HELIX 6 6 ALA A 102 SER A 108 1 7 HELIX 7 7 SER A 108 GLY A 120 1 13 HELIX 8 8 SER A 152 LEU A 161 1 10 HELIX 9 9 PRO A 162 GLY A 164 5 3 HELIX 10 10 ASP A 183 TYR A 194 1 12 HELIX 11 11 ASP A 207 ALA A 213 1 7 HELIX 12 12 LEU A 214 GLY A 218 5 5 HELIX 13 13 GLY A 225 GLU A 230 1 6 HELIX 14 14 THR A 234 ASN A 244 1 11 SHEET 1 AA 7 ARG A 23 ASP A 26 0 SHEET 2 AA 7 THR A 12 VAL A 15B-1 O ARG A 15 N ARG A 25 SHEET 3 AA 7 ILE A 2 ILE A 9 -1 O ASP A 7 N VAL A 14 SHEET 4 AA 7 GLY A 221 VAL A 224 1 O VAL A 222 N ILE A 3 SHEET 5 AA 7 ALA A 198 SER A 202 1 O PHE A 199 N GLY A 221 SHEET 6 AA 7 HIS A 167 ASP A 172 1 O VAL A 168 N GLN A 200 SHEET 7 AA 7 LEU A 124 ILE A 132 1 O LEU A 126 N LEU A 169 SHEET 1 AB 2 ARG A 23 ASP A 26 0 SHEET 2 AB 2 LEU A 124 ILE A 132 1 O VAL A 125 N LEU A 101 SITE 1 AC1 7 GLY A 81 VAL A 82 ARG A 83 ALA A 102 SITE 2 AC1 7 SER A 103 HOH A2031 HOH A2032 SITE 1 AC2 6 ARG A 15 GLY A 177 GLY A 225 ARG A 226 SITE 2 AC2 6 HOH A2080 HOH A2081 CRYST1 85.239 85.239 119.986 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011732 0.006773 0.000000 0.00000 SCALE2 0.000000 0.013547 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008334 0.00000