HEADER ISOMERASE 05-FEB-15 5AHE TITLE CRYSTAL STRUCTURE OF SALMONELLA ENTERICA HISA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO) COMPND 3 METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: PHOSPHORIBOSYLFORMIMINO-5-AMINOIMIDAZOLE CARBOXAMIDE COMPND 6 RIBOTIDE ISOMERASE; COMPND 7 EC: 5.3.1.16; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA; SOURCE 3 ORGANISM_TAXID: 28901; SOURCE 4 GENE: HISA, AIY46_13150, AL463_17045, CQW68_13095, D3346_17640, SOURCE 5 D3Q81_15095, EAW95_14430, FJR52_10950, GCH85_22590, NCTC6385_02080, SOURCE 6 ND68_15100; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PEXP5-CT KEYWDS ISOMERASE, HISTIDINE BIOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR A.SODERHOLM,X.GUO,M.S.NEWTON,G.B.EVANS,J.NASVALL,W.M.PATRICK,M.SELMER REVDAT 4 06-NOV-24 5AHE 1 REMARK REVDAT 3 10-JAN-24 5AHE 1 COMPND SOURCE REMARK DBREF REVDAT 3 2 1 SEQADV SHEET LINK REVDAT 2 21-OCT-15 5AHE 1 JRNL REVDAT 1 02-SEP-15 5AHE 0 JRNL AUTH A.SODERHOLM,X.GUO,M.S.NEWTON,G.B.EVANS,J.NASVALL, JRNL AUTH 2 W.M.PATRICK,M.SELMER JRNL TITL TWO-STEP LIGAND BINDING IN A BETA/ALPHA8 BARREL ENZYME JRNL TITL 2 -SUBSTRATE-BOUND STRUCTURES SHED NEW LIGHT ON THE CATALYTIC JRNL TITL 3 CYCLE OF HISA JRNL REF J.BIOL.CHEM. V. 290 24657 2015 JRNL REFN ISSN 0021-9258 JRNL PMID 26294764 JRNL DOI 10.1074/JBC.M115.678086 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 30375 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2678 - 3.7803 1.00 2850 147 0.1612 0.1883 REMARK 3 2 3.7803 - 3.0007 1.00 2682 149 0.1703 0.2016 REMARK 3 3 3.0007 - 2.6214 1.00 2635 139 0.1863 0.2194 REMARK 3 4 2.6214 - 2.3818 1.00 2630 138 0.1732 0.1892 REMARK 3 5 2.3818 - 2.2110 1.00 2609 133 0.1714 0.2009 REMARK 3 6 2.2110 - 2.0807 1.00 2586 136 0.1736 0.1926 REMARK 3 7 2.0807 - 1.9765 1.00 2584 137 0.1738 0.2155 REMARK 3 8 1.9765 - 1.8904 1.00 2578 136 0.1750 0.2382 REMARK 3 9 1.8904 - 1.8177 1.00 2568 135 0.1908 0.2362 REMARK 3 10 1.8177 - 1.7549 1.00 2579 136 0.2075 0.2788 REMARK 3 11 1.7549 - 1.7001 1.00 2554 134 0.2281 0.2694 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1902 REMARK 3 ANGLE : 1.105 2610 REMARK 3 CHIRALITY : 0.052 312 REMARK 3 PLANARITY : 0.006 332 REMARK 3 DIHEDRAL : 12.651 714 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:24) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2263 34.0090 -7.9228 REMARK 3 T TENSOR REMARK 3 T11: 0.1524 T22: 0.1296 REMARK 3 T33: 0.1629 T12: 0.0338 REMARK 3 T13: -0.0143 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.5326 L22: 0.4796 REMARK 3 L33: 0.4179 L12: 0.4411 REMARK 3 L13: -0.0884 L23: -0.0049 REMARK 3 S TENSOR REMARK 3 S11: -0.1713 S12: -0.1145 S13: 0.0783 REMARK 3 S21: 0.1063 S22: 0.0360 S23: 0.1466 REMARK 3 S31: -0.2165 S32: -0.0831 S33: -0.0417 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 25:81) REMARK 3 ORIGIN FOR THE GROUP (A): 6.7787 28.7103 -12.7555 REMARK 3 T TENSOR REMARK 3 T11: 0.1463 T22: 0.1280 REMARK 3 T33: 0.1491 T12: 0.0048 REMARK 3 T13: -0.0131 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 0.8975 L22: 1.5286 REMARK 3 L33: 0.3778 L12: 0.4390 REMARK 3 L13: 0.3426 L23: -0.0774 REMARK 3 S TENSOR REMARK 3 S11: -0.0590 S12: 0.0181 S13: 0.1405 REMARK 3 S21: -0.1252 S22: 0.0480 S23: 0.1862 REMARK 3 S31: -0.1425 S32: -0.0162 S33: 0.0009 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 82:98) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2885 17.1521 -10.0190 REMARK 3 T TENSOR REMARK 3 T11: 0.1380 T22: 0.2084 REMARK 3 T33: 0.1494 T12: 0.0021 REMARK 3 T13: 0.0038 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 0.1244 L22: 0.3843 REMARK 3 L33: 0.3484 L12: -0.1301 REMARK 3 L13: -0.1323 L23: -0.1790 REMARK 3 S TENSOR REMARK 3 S11: -0.0963 S12: 0.0080 S13: -0.1014 REMARK 3 S21: -0.0693 S22: -0.0494 S23: 0.0398 REMARK 3 S31: -0.0926 S32: -0.3434 S33: -0.0258 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 99:128) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1364 14.1292 -0.0825 REMARK 3 T TENSOR REMARK 3 T11: 0.1486 T22: 0.1266 REMARK 3 T33: 0.1697 T12: -0.0002 REMARK 3 T13: 0.0300 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.4766 L22: 0.1835 REMARK 3 L33: 0.3241 L12: -0.3173 REMARK 3 L13: -0.0134 L23: -0.1327 REMARK 3 S TENSOR REMARK 3 S11: -0.1181 S12: 0.0090 S13: -0.1758 REMARK 3 S21: 0.0059 S22: 0.1417 S23: 0.0304 REMARK 3 S31: 0.0062 S32: -0.0194 S33: -0.0002 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 129:144) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4446 27.2787 15.8443 REMARK 3 T TENSOR REMARK 3 T11: 0.2777 T22: 0.2010 REMARK 3 T33: 0.1368 T12: 0.0785 REMARK 3 T13: -0.0010 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.5724 L22: 0.4522 REMARK 3 L33: 0.0140 L12: 0.1022 REMARK 3 L13: 0.0032 L23: 0.1103 REMARK 3 S TENSOR REMARK 3 S11: -0.2320 S12: 0.0009 S13: 0.1147 REMARK 3 S21: 0.5242 S22: 0.3272 S23: 0.0803 REMARK 3 S31: 0.0257 S32: 0.2214 S33: 0.0217 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 145:174) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2769 19.8000 9.3890 REMARK 3 T TENSOR REMARK 3 T11: 0.1451 T22: 0.1329 REMARK 3 T33: 0.1560 T12: 0.0169 REMARK 3 T13: 0.0252 T23: 0.0308 REMARK 3 L TENSOR REMARK 3 L11: 0.5855 L22: 0.9029 REMARK 3 L33: 0.6130 L12: 0.0762 REMARK 3 L13: -0.0790 L23: 0.3804 REMARK 3 S TENSOR REMARK 3 S11: -0.1287 S12: -0.0960 S13: -0.1202 REMARK 3 S21: 0.0333 S22: 0.1976 S23: 0.1403 REMARK 3 S31: -0.0006 S32: 0.1060 S33: 0.1179 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 181:188) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5407 26.9244 14.2051 REMARK 3 T TENSOR REMARK 3 T11: 0.2932 T22: 0.3129 REMARK 3 T33: 0.3031 T12: -0.0058 REMARK 3 T13: 0.0100 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.0528 L22: 0.0391 REMARK 3 L33: 0.0231 L12: 0.0435 REMARK 3 L13: -0.0173 L23: -0.0044 REMARK 3 S TENSOR REMARK 3 S11: 0.1521 S12: -0.1544 S13: 0.4672 REMARK 3 S21: -0.1024 S22: -0.2020 S23: -0.0101 REMARK 3 S31: -0.2639 S32: 0.1752 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 189:219) REMARK 3 ORIGIN FOR THE GROUP (A): 16.8323 24.4873 7.9689 REMARK 3 T TENSOR REMARK 3 T11: 0.1650 T22: 0.1848 REMARK 3 T33: 0.1109 T12: -0.0234 REMARK 3 T13: 0.0011 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 0.2915 L22: 0.4216 REMARK 3 L33: 0.4067 L12: -0.1084 REMARK 3 L13: -0.3095 L23: -0.4117 REMARK 3 S TENSOR REMARK 3 S11: 0.0585 S12: -0.1612 S13: -0.0444 REMARK 3 S21: 0.1202 S22: -0.0738 S23: -0.0455 REMARK 3 S31: -0.0864 S32: 0.2365 S33: 0.0249 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 220:244) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4705 31.9936 -1.9662 REMARK 3 T TENSOR REMARK 3 T11: 0.1596 T22: 0.1542 REMARK 3 T33: 0.1439 T12: -0.0362 REMARK 3 T13: 0.0004 T23: 0.0201 REMARK 3 L TENSOR REMARK 3 L11: 0.2628 L22: 0.2530 REMARK 3 L33: 0.2301 L12: 0.0423 REMARK 3 L13: 0.2008 L23: 0.1040 REMARK 3 S TENSOR REMARK 3 S11: 0.0478 S12: -0.2350 S13: -0.0118 REMARK 3 S21: 0.1359 S22: -0.0072 S23: -0.0184 REMARK 3 S31: -0.1074 S32: 0.0741 S33: 0.0035 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES 17-23, 175-180 AND 245- -253 REMARK 3 ARE DISORDERED REMARK 4 REMARK 4 5AHE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1290062960. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : SILICON 111 CRYSTAL REMARK 200 OPTICS : PT COATED SI MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH CHESS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30376 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.820 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.10 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.8100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 19.10 REMARK 200 R MERGE FOR SHELL (I) : 1.27000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.820 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: A MUTANT SALMONELLA ENTERICA HISA WAS USED, WHICH REMARK 200 IN TURN HAD BEEN SOLVED USING 4GJ1 AS SEARCH MODEL. REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED IN 0.1 M REMARK 280 HEPES PH 7.5, 0.8 M NAH2PO4 AND 0.8 M KH2PO4., PH 5.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.51000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.02000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 60.76500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 101.27500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 20.25500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 40.51000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 81.02000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 101.27500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 60.76500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 20.25500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2014 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 17 REMARK 465 GLN A 18 REMARK 465 GLY A 19 REMARK 465 ASP A 20 REMARK 465 TYR A 21 REMARK 465 ALA A 22 REMARK 465 ARG A 23 REMARK 465 ARG A 175 REMARK 465 ASP A 176 REMARK 465 GLY A 177 REMARK 465 THR A 178 REMARK 465 LEU A 179 REMARK 465 ALA A 180 REMARK 465 VAL A 245 REMARK 465 LYS A 246 REMARK 465 GLY A 247 REMARK 465 HIS A 248 REMARK 465 HIS A 249 REMARK 465 HIS A 250 REMARK 465 HIS A 251 REMARK 465 HIS A 252 REMARK 465 HIS A 253 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O4 PO4 A 1247 O HOH A 2079 7555 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 53.24 -118.18 REMARK 500 ASP A 56 99.99 -161.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1248 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 5 O REMARK 620 2 HOH A2006 O 103.3 REMARK 620 3 HOH A2007 O 98.6 111.9 REMARK 620 N 1 2 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1247 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1248 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 1249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1251 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5AHF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SALMONELLA ENTERICA HISA MUTANT D7N WITH PROFAR REMARK 900 RELATED ID: 5AHI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SALMONALLA ENTERICA HISA MUTANT D7N WITH PROFAR DBREF1 5AHE A 1 245 UNP A0A630AQ07_SALER DBREF2 5AHE A A0A630AQ07 1 245 SEQADV 5AHE LYS A 246 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AHE GLY A 247 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AHE HIS A 248 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AHE HIS A 249 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AHE HIS A 250 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AHE HIS A 251 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AHE HIS A 252 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5AHE HIS A 253 UNP A0A630AQ0 EXPRESSION TAG SEQRES 1 A 253 MET ILE ILE PRO ALA LEU ASP LEU ILE ASP GLY THR VAL SEQRES 2 A 253 VAL ARG LEU HIS GLN GLY ASP TYR ALA ARG GLN ARG ASP SEQRES 3 A 253 TYR GLY ASN ASP PRO LEU PRO ARG LEU GLN ASP TYR ALA SEQRES 4 A 253 ALA GLN GLY ALA GLY VAL LEU HIS LEU VAL ASP LEU THR SEQRES 5 A 253 GLY ALA LYS ASP PRO ALA LYS ARG GLN ILE PRO LEU ILE SEQRES 6 A 253 LYS THR LEU VAL ALA GLY VAL ASN VAL PRO VAL GLN VAL SEQRES 7 A 253 GLY GLY GLY VAL ARG THR GLU GLU ASP VAL ALA ALA LEU SEQRES 8 A 253 LEU LYS ALA GLY VAL ALA ARG VAL VAL ILE GLY SER THR SEQRES 9 A 253 ALA VAL LYS SER PRO ASP VAL VAL LYS GLY TRP PHE GLU SEQRES 10 A 253 ARG PHE GLY ALA GLN ALA LEU VAL LEU ALA LEU ASP VAL SEQRES 11 A 253 ARG ILE ASP GLU HIS GLY THR LYS GLN VAL ALA VAL SER SEQRES 12 A 253 GLY TRP GLN GLU ASN SER GLY VAL SER LEU GLU GLN LEU SEQRES 13 A 253 VAL GLU THR TYR LEU PRO VAL GLY LEU LYS HIS VAL LEU SEQRES 14 A 253 CYS THR ASP ILE SER ARG ASP GLY THR LEU ALA GLY SER SEQRES 15 A 253 ASN VAL SER LEU TYR GLU GLU VAL CYS ALA ARG TYR PRO SEQRES 16 A 253 GLN ILE ALA PHE GLN SER SER GLY GLY ILE GLY ASP ILE SEQRES 17 A 253 ASP ASP ILE ALA ALA LEU ARG GLY THR GLY VAL ARG GLY SEQRES 18 A 253 VAL ILE VAL GLY ARG ALA LEU LEU GLU GLY LYS PHE THR SEQRES 19 A 253 VAL LYS GLU ALA ILE GLN CME TRP GLN ASN VAL LYS GLY SEQRES 20 A 253 HIS HIS HIS HIS HIS HIS MODRES 5AHE CME A 241 CYS MODIFIED RESIDUE HET CME A 241 10 HET PO4 A1245 5 HET PO4 A1246 10 HET PO4 A1247 5 HET NA A1248 1 HET EPE A1249 15 HET GOL A1250 6 HET GOL A1251 6 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM PO4 PHOSPHATE ION HETNAM NA SODIUM ION HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM GOL GLYCEROL HETSYN EPE HEPES HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CME C5 H11 N O3 S2 FORMUL 2 PO4 3(O4 P 3-) FORMUL 5 NA NA 1+ FORMUL 6 EPE C8 H18 N2 O4 S FORMUL 7 GOL 2(C3 H8 O3) FORMUL 9 HOH *115(H2 O) HELIX 1 1 ASP A 30 GLN A 41 1 12 HELIX 2 2 LEU A 51 ASP A 56 1 6 HELIX 3 3 PRO A 57 ARG A 60 5 4 HELIX 4 4 GLN A 61 GLY A 71 1 11 HELIX 5 5 THR A 84 ALA A 94 1 11 HELIX 6 6 GLY A 102 SER A 108 1 7 HELIX 7 7 SER A 108 GLY A 120 1 13 HELIX 8 8 SER A 152 LEU A 161 1 10 HELIX 9 9 PRO A 162 GLY A 164 5 3 HELIX 10 10 GLY A 181 TYR A 194 1 14 HELIX 11 11 ASP A 207 ARG A 215 1 9 HELIX 12 12 GLY A 225 GLU A 230 1 6 HELIX 13 13 THR A 234 ASN A 244 1 11 SHEET 1 AA 7 ARG A 25 ASP A 26 0 SHEET 2 AA 7 THR A 12 ARG A 15 1 O ARG A 15 N ARG A 25 SHEET 3 AA 7 ILE A 2 ILE A 9 -1 O ASP A 7 N VAL A 14 SHEET 4 AA 7 GLY A 221 VAL A 224 1 O VAL A 222 N ILE A 3 SHEET 5 AA 7 ALA A 198 SER A 202 1 O SER A 201 N ILE A 223 SHEET 6 AA 7 HIS A 167 ASP A 172 1 O VAL A 168 N GLN A 200 SHEET 7 AA 7 LEU A 124 ILE A 132 1 O LEU A 126 N LEU A 169 SHEET 1 AB 2 ARG A 25 ASP A 26 0 SHEET 2 AB 2 LEU A 124 ILE A 132 1 O VAL A 125 N ILE A 101 LINK C GLN A 240 N CME A 241 1555 1555 1.32 LINK C CME A 241 N TRP A 242 1555 1555 1.32 LINK O ALA A 5 NA NA A1248 1555 1555 2.95 LINK NA NA A1248 O HOH A2006 1555 1555 2.65 LINK NA NA A1248 O HOH A2007 1555 1555 2.57 SITE 1 AC1 7 GLY A 81 ARG A 83 GLY A 102 SER A 103 SITE 2 AC1 7 HOH A2042 HOH A2043 HOH A2114 SITE 1 AC2 3 GLY A 225 ARG A 226 HOH A2097 SITE 1 AC3 6 LYS A 138 GLU A 154 GLU A 189 ARG A 193 SITE 2 AC3 6 HOH A2079 HOH A2089 SITE 1 AC4 5 ALA A 5 GLY A 225 LEU A 229 HOH A2006 SITE 2 AC4 5 HOH A2007 SITE 1 AC5 9 MET A 1 ARG A 131 GLN A 139 GLU A 147 SITE 2 AC5 9 ASN A 148 GLY A 150 ARG A 220 GLN A 243 SITE 3 AC5 9 HOH A2073 SITE 1 AC6 5 ASP A 110 LYS A 113 PHE A 119 GLN A 122 SITE 2 AC6 5 GOL A1251 SITE 1 AC7 7 ALA A 97 VAL A 106 PRO A 109 GLN A 122 SITE 2 AC7 7 LEU A 156 GOL A1250 HOH A2077 CRYST1 86.769 86.769 121.530 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011525 0.006654 0.000000 0.00000 SCALE2 0.000000 0.013308 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008228 0.00000