HEADER HYDROLASE 13-FEB-15 5AIG TITLE DISCOVERY AND CHARACTERIZATION OF THERMOPHILIC LIMONENE-1,2-EPOXIDE TITLE 2 HYDROLASES FROM HOT SPRING METAGENOMIC LIBRARIES. TOMSK-SAMPLE- TITLE 3 VALPROMIDE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIMONENE-1,2-EPOXIDE HYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.3.2.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 3 ORGANISM_TAXID: 32644; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: 10G; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PRHAM KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.FERRANDI,C.SAYER,M.N.ISUPOV,C.ANNOVAZZI,C.MARCHESI,G.IACOBONE, AUTHOR 2 X.PENG,E.BONCH-OSMOLOVSKAYA,R.WOHLGEMUTH,J.A.LITTLECHILD,D.MONTIA REVDAT 5 10-JAN-24 5AIG 1 REMARK REVDAT 4 13-SEP-17 5AIG 1 REMARK REVDAT 3 12-AUG-15 5AIG 1 JRNL REVDAT 2 22-JUL-15 5AIG 1 JRNL REVDAT 1 17-JUN-15 5AIG 0 JRNL AUTH E.E.FERRANDI,C.SAYER,M.N.ISUPOV,C.ANNOVAZZI,C.MARCHESI, JRNL AUTH 2 G.IACOBONE,X.PENG,E.BONCH-OSMOLOVSKAYA,R.WOHLGEMUTH, JRNL AUTH 3 J.A.LITTLECHILD,D.MONTIA JRNL TITL DISCOVERY AND CHARACTERIZATION OF THERMOPHILIC JRNL TITL 2 LIMONENE-1,2-EPOXIDE HYDROLASES FROM HOT SPRING METAGENOMIC JRNL TITL 3 LIBRARIES JRNL REF FEBS J. V. 282 2879 2015 JRNL REFN ISSN 1742-464X JRNL PMID 26032250 JRNL DOI 10.1111/FEBS.13328 REMARK 2 REMARK 2 RESOLUTION. 1.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 98956 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.109 REMARK 3 R VALUE (WORKING SET) : 0.108 REMARK 3 FREE R VALUE : 0.133 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 5139 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.16 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.19 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7237 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.49 REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 REMARK 3 BIN FREE R VALUE SET COUNT : 397 REMARK 3 BIN FREE R VALUE : 0.2290 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1960 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 491 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.45000 REMARK 3 B22 (A**2) : -0.45000 REMARK 3 B33 (A**2) : 1.47000 REMARK 3 B12 (A**2) : -0.23000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.025 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.027 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.020 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.020 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.988 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.981 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2512 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2421 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3491 ; 1.620 ; 1.942 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5616 ; 1.861 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 357 ; 5.816 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 143 ;35.279 ;23.566 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 452 ;15.069 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;11.498 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 382 ; 0.113 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3002 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 658 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1126 ; 2.442 ; 3.672 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1125 ; 2.470 ; 3.647 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1440 ; 3.380 ; 6.214 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1386 ; 5.609 ; 4.736 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4933 ; 3.976 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 25 ;40.232 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5289 ;17.189 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 5AIG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1290063044. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 104136 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.160 REMARK 200 RESOLUTION RANGE LOW (A) : 48.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.97000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1NWW REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.96000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.98000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.47000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 9.49000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.45000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 125 REMARK 465 ALA B 125 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2105 O HOH A 2203 1.71 REMARK 500 O HOH A 2097 O HOH A 2099 1.75 REMARK 500 O HOH A 2110 O HOH A 2208 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2020 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A2040 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH A2052 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A2056 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A2281 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH B2013 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH B2019 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH B2022 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH B2034 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH B2040 DISTANCE = 6.40 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VPR A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VPR B 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5AIF RELATED DB: PDB REMARK 900 DISCOVERY AND CHARACTERIZATION OF THERMOPHILIC LIMONENE-1 ,2- REMARK 900 EPOXIDE HYDROLASES FROM HOT SPRING METAGENOMIC LIBRARIES. TOMSK- REMARK 900 SAMPLE-NATIVE REMARK 900 RELATED ID: 5AIH RELATED DB: PDB REMARK 900 DISCOVERY AND CHARACTERIZATION OF THERMOPHILIC LIMONENE-1 ,2- REMARK 900 EPOXIDE HYDROLASES FROM HOT SPRING METAGENOMIC LIBRARIES. CH55- REMARK 900 SAMPLE-NATIVE REMARK 900 RELATED ID: 5AII RELATED DB: PDB REMARK 900 DISCOVERY AND CHARACTERIZATION OF THERMOPHILIC LIMONENE-1 ,2- REMARK 900 EPOXIDE HYDROLASES FROM HOT SPRING METAGENOMIC LIBRARIES. CH55- REMARK 900 SAMPLE-PEG COMPLEX REMARK 999 REMARK 999 SEQUENCE REMARK 999 GENBANK KP765711 DBREF 5AIG A 1 125 PDB 5AIG 5AIG 1 125 DBREF 5AIG B 1 125 PDB 5AIG 5AIG 1 125 SEQRES 1 A 125 MET THR PRO ILE GLU THR VAL THR ALA PHE ILE ALA HIS SEQRES 2 A 125 TRP ASN SER GLY ASP MET GLU ALA MET TYR ASP LEU CYS SEQRES 3 A 125 ALA GLU ASP VAL VAL TRP HIS ASN ILE PRO MET GLU PRO SEQRES 4 A 125 ILE ALA GLY LYS PRO ALA MET ARG ALA ALA VAL GLU GLY SEQRES 5 A 125 PHE MET ALA ASN VAL SER GLN CYS ASP TRP GLN VAL HIS SEQRES 6 A 125 ALA ILE ALA ALA ASN GLY ALA THR VAL LEU THR GLU ARG SEQRES 7 A 125 THR ASP GLY PHE THR PHE THR ASN GLY ARG ARG ALA THR SEQRES 8 A 125 ILE ARG VAL MET GLY THR PHE GLU CYS ASP ALA GLU ARG SEQRES 9 A 125 ARG ILE ILE ALA TRP ARG ASP TYR PHE ASP MET LEU GLU SEQRES 10 A 125 PHE GLN ARG GLU PHE ALA GLY ALA SEQRES 1 B 125 MET THR PRO ILE GLU THR VAL THR ALA PHE ILE ALA HIS SEQRES 2 B 125 TRP ASN SER GLY ASP MET GLU ALA MET TYR ASP LEU CYS SEQRES 3 B 125 ALA GLU ASP VAL VAL TRP HIS ASN ILE PRO MET GLU PRO SEQRES 4 B 125 ILE ALA GLY LYS PRO ALA MET ARG ALA ALA VAL GLU GLY SEQRES 5 B 125 PHE MET ALA ASN VAL SER GLN CYS ASP TRP GLN VAL HIS SEQRES 6 B 125 ALA ILE ALA ALA ASN GLY ALA THR VAL LEU THR GLU ARG SEQRES 7 B 125 THR ASP GLY PHE THR PHE THR ASN GLY ARG ARG ALA THR SEQRES 8 B 125 ILE ARG VAL MET GLY THR PHE GLU CYS ASP ALA GLU ARG SEQRES 9 B 125 ARG ILE ILE ALA TRP ARG ASP TYR PHE ASP MET LEU GLU SEQRES 10 B 125 PHE GLN ARG GLU PHE ALA GLY ALA HET VPR A 200 20 HET DMS A 201 4 HET DMS A 202 4 HET VPR B 200 20 HET DMS B 201 4 HET DMS B 202 4 HETNAM VPR 2-PROPYLPENTANAMIDE HETNAM DMS DIMETHYL SULFOXIDE HETSYN VPR VALPROMIDE FORMUL 3 VPR 2(C8 H17 N O) FORMUL 4 DMS 4(C2 H6 O S) FORMUL 9 HOH *491(H2 O) HELIX 1 1 THR A 2 GLY A 17 1 16 HELIX 2 2 ASP A 18 LEU A 25 1 8 HELIX 3 3 GLY A 42 ALA A 55 1 14 HELIX 4 4 ASP A 114 ALA A 123 1 10 HELIX 5 5 THR B 2 GLY B 17 1 16 HELIX 6 6 ASP B 18 LEU B 25 1 8 HELIX 7 7 GLY B 42 MET B 54 1 13 HELIX 8 8 ASP B 114 ALA B 123 1 10 SHEET 1 AA 6 ILE A 40 ALA A 41 0 SHEET 2 AA 6 CYS A 26 ASN A 34 -1 O TRP A 32 N ILE A 40 SHEET 3 AA 6 ILE A 106 TYR A 112 1 O ILE A 106 N ALA A 27 SHEET 4 AA 6 ARG A 89 CYS A 100 -1 O MET A 95 N TYR A 112 SHEET 5 AA 6 THR A 73 PHE A 84 -1 O VAL A 74 N PHE A 98 SHEET 6 AA 6 VAL A 57 ASN A 70 -1 N SER A 58 O THR A 83 SHEET 1 BA 6 ILE B 40 ALA B 41 0 SHEET 2 BA 6 CYS B 26 ASN B 34 -1 O TRP B 32 N ILE B 40 SHEET 3 BA 6 ILE B 106 TYR B 112 1 O ILE B 106 N ALA B 27 SHEET 4 BA 6 ARG B 89 CYS B 100 -1 O MET B 95 N TYR B 112 SHEET 5 BA 6 THR B 73 PHE B 84 -1 O VAL B 74 N PHE B 98 SHEET 6 BA 6 VAL B 57 ASN B 70 -1 N SER B 58 O THR B 83 SITE 1 AC1 8 TRP A 62 ASP A 80 PHE A 82 ASP A 111 SITE 2 AC1 8 PHE A 113 PHE A 118 PHE A 122 HOH A2143 SITE 1 AC2 5 MET A 54 VAL A 57 SER A 58 HOH A2181 SITE 2 AC2 5 HOH A2279 SITE 1 AC3 5 HIS A 65 GLU A 77 HOH B2038 HOH B2177 SITE 2 AC3 5 HOH B2200 SITE 1 AC4 9 PHE B 53 MET B 54 TRP B 62 ASP B 80 SITE 2 AC4 9 PHE B 82 ASP B 111 PHE B 118 PHE B 122 SITE 3 AC4 9 HOH B2100 SITE 1 AC5 6 MET B 19 MET B 54 VAL B 57 SER B 58 SITE 2 AC5 6 HOH B2134 HOH B2209 SITE 1 AC6 4 HOH A2055 HOH A2266 GLU B 77 HOH B2210 CRYST1 96.460 96.460 56.940 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010367 0.005985 0.000000 0.00000 SCALE2 0.000000 0.011971 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017562 0.00000 MTRIX1 1 0.208420 0.977970 0.012060 -0.33533 1 MTRIX2 1 0.977910 -0.208570 0.013660 0.13449 1 MTRIX3 1 0.015880 0.008950 -0.999830 21.13291 1