data_5AIZ # _entry.id 5AIZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5AIZ PDBE EBI-63091 WWPDB D_1290063091 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5AIZ _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-02-18 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cho, H.J.' 1 'Murai, M.' 2 'Chiang, M.' 3 'Cierpicki, T.' 4 # _citation.id primary _citation.title 'The Pias-Like Coactivator Zmiz1 is a Direct and Selective Cofactor of Notch1 in T-Cell Development and Leukemia' _citation.journal_abbrev Immunity _citation.journal_volume 43 _citation.page_first 870 _citation.page_last ? _citation.year 2015 _citation.journal_id_ASTM IUNIEH _citation.country US _citation.journal_id_ISSN 1074-7613 _citation.journal_id_CSD 2048 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26522984 _citation.pdbx_database_id_DOI 10.1016/J.IMMUNI.2015.10.007 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Cho, H.J.' 1 primary 'Chiang, M.' 2 primary 'Cierpicki, T.' 3 # _cell.entry_id 5AIZ _cell.length_a 43.472 _cell.length_b 45.040 _cell.length_c 57.518 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AIZ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 1' 14227.590 1 ? ? 'TPR DOMAIN, UNP RESIDUES 1-118' ? 2 non-polymer syn 'UNKNOWN ATOM OR ION' ? 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 5 water nat water 18.015 131 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PIAS-LIKE PROTEIN ZIMP10, RETINOIC ACID-INDUCED PROTEIN 17, ZMIZ1 N-TERMINAL DOMAIN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GPA(MSE)AH(MSE)NS(MSE)DRHIQQTNDRLQCIKQHLQNPANFHNAATELLDWCGDPRAFQRPFEQSL(MSE)GCLT VVSRVAAQQGFDLDLGYRLLAVCAANRDKFTPKSAALLSSWCEELGRLLLLRHQKSRQSD ; _entity_poly.pdbx_seq_one_letter_code_can ;GPAMAHMNSMDRHIQQTNDRLQCIKQHLQNPANFHNAATELLDWCGDPRAFQRPFEQSLMGCLTVVSRVAAQQGFDLDLG YRLLAVCAANRDKFTPKSAALLSSWCEELGRLLLLRHQKSRQSD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 ALA n 1 4 MSE n 1 5 ALA n 1 6 HIS n 1 7 MSE n 1 8 ASN n 1 9 SER n 1 10 MSE n 1 11 ASP n 1 12 ARG n 1 13 HIS n 1 14 ILE n 1 15 GLN n 1 16 GLN n 1 17 THR n 1 18 ASN n 1 19 ASP n 1 20 ARG n 1 21 LEU n 1 22 GLN n 1 23 CYS n 1 24 ILE n 1 25 LYS n 1 26 GLN n 1 27 HIS n 1 28 LEU n 1 29 GLN n 1 30 ASN n 1 31 PRO n 1 32 ALA n 1 33 ASN n 1 34 PHE n 1 35 HIS n 1 36 ASN n 1 37 ALA n 1 38 ALA n 1 39 THR n 1 40 GLU n 1 41 LEU n 1 42 LEU n 1 43 ASP n 1 44 TRP n 1 45 CYS n 1 46 GLY n 1 47 ASP n 1 48 PRO n 1 49 ARG n 1 50 ALA n 1 51 PHE n 1 52 GLN n 1 53 ARG n 1 54 PRO n 1 55 PHE n 1 56 GLU n 1 57 GLN n 1 58 SER n 1 59 LEU n 1 60 MSE n 1 61 GLY n 1 62 CYS n 1 63 LEU n 1 64 THR n 1 65 VAL n 1 66 VAL n 1 67 SER n 1 68 ARG n 1 69 VAL n 1 70 ALA n 1 71 ALA n 1 72 GLN n 1 73 GLN n 1 74 GLY n 1 75 PHE n 1 76 ASP n 1 77 LEU n 1 78 ASP n 1 79 LEU n 1 80 GLY n 1 81 TYR n 1 82 ARG n 1 83 LEU n 1 84 LEU n 1 85 ALA n 1 86 VAL n 1 87 CYS n 1 88 ALA n 1 89 ALA n 1 90 ASN n 1 91 ARG n 1 92 ASP n 1 93 LYS n 1 94 PHE n 1 95 THR n 1 96 PRO n 1 97 LYS n 1 98 SER n 1 99 ALA n 1 100 ALA n 1 101 LEU n 1 102 LEU n 1 103 SER n 1 104 SER n 1 105 TRP n 1 106 CYS n 1 107 GLU n 1 108 GLU n 1 109 LEU n 1 110 GLY n 1 111 ARG n 1 112 LEU n 1 113 LEU n 1 114 LEU n 1 115 LEU n 1 116 ARG n 1 117 HIS n 1 118 GLN n 1 119 LYS n 1 120 SER n 1 121 ARG n 1 122 GLN n 1 123 SER n 1 124 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ROSETTA2 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'MODIFIED PET32A' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ZMIZ1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q9ULJ6 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5AIZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 7 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 124 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9ULJ6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 118 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 118 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5AIZ GLY A 1 ? UNP Q9ULJ6 ? ? 'expression tag' -5 1 1 5AIZ PRO A 2 ? UNP Q9ULJ6 ? ? 'expression tag' -4 2 1 5AIZ ALA A 3 ? UNP Q9ULJ6 ? ? 'expression tag' -3 3 1 5AIZ MSE A 4 ? UNP Q9ULJ6 ? ? 'expression tag' -2 4 1 5AIZ ALA A 5 ? UNP Q9ULJ6 ? ? 'expression tag' -1 5 1 5AIZ HIS A 6 ? UNP Q9ULJ6 ? ? 'expression tag' 0 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 5AIZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_percent_sol 46.67 _exptl_crystal.description 'THE STRUCTURE WAS SOLVED BY SAD PHASING AND AN INITIAL MODEL WAS GENERATED USING AN EARLY VERSION HKL3000' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '2.5 M SODIUM CHLORIDE, 0.2 M LITHIUM SULFATE AND 0.1 M SODIUM ACETATE PH4.5' # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2012-08-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'KOHZU MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97928 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_wavelength 0.97928 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5AIZ _reflns.observed_criterion_sigma_I -2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.70 _reflns.number_obs 12677 _reflns.number_all ? _reflns.percent_possible_obs 98.2 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 32.85 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10.2 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.73 _reflns_shell.percent_possible_all 95.4 _reflns_shell.Rmerge_I_obs 0.44 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.65 _reflns_shell.pdbx_redundancy 8.1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5AIZ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 12026 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35.46 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 98.13 _refine.ls_R_factor_obs 0.16061 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.15839 _refine.ls_R_factor_R_free 0.20441 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 622 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.950 _refine.B_iso_mean 18.335 _refine.aniso_B[1][1] -0.17 _refine.aniso_B[2][2] 0.49 _refine.aniso_B[3][3] -0.32 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.098 _refine.pdbx_overall_ESU_R_Free 0.103 _refine.overall_SU_ML 0.066 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.946 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 870 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 131 _refine_hist.number_atoms_total 1010 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 35.46 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.021 0.019 ? 899 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 855 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.913 1.956 ? 1215 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.953 3.000 ? 1953 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.896 5.000 ? 111 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 41.373 24.043 ? 47 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.542 15.000 ? 146 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.958 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.117 0.200 ? 133 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.011 0.020 ? 1043 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 225 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.700 1.442 ? 442 'X-RAY DIFFRACTION' ? r_mcbond_other 1.636 1.427 ? 440 'X-RAY DIFFRACTION' ? r_mcangle_it 2.470 2.142 ? 550 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.792 1.921 ? 457 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.702 _refine_ls_shell.d_res_low 1.747 _refine_ls_shell.number_reflns_R_work 838 _refine_ls_shell.R_factor_R_work 0.184 _refine_ls_shell.percent_reflns_obs 93.89 _refine_ls_shell.R_factor_R_free 0.261 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 54 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 5AIZ _struct.title 'The PIAS-like coactivator Zmiz1 is a direct and selective cofactor of Notch1 in T-cell development and leukemia' _struct.pdbx_descriptor 'ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5AIZ _struct_keywords.pdbx_keywords 'ZINC-BINDING PROTEIN' _struct_keywords.text 'ZINC-BINDING PROTEIN, PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 13 ? LEU A 28 ? HIS A 7 LEU A 22 1 ? 16 HELX_P HELX_P2 2 ASN A 30 ? GLY A 46 ? ASN A 24 GLY A 40 1 ? 17 HELX_P HELX_P3 3 ASP A 47 ? PHE A 51 ? ASP A 41 PHE A 45 5 ? 5 HELX_P HELX_P4 4 GLN A 52 ? ALA A 70 ? GLN A 46 ALA A 64 1 ? 19 HELX_P HELX_P5 5 ASP A 76 ? ASN A 90 ? ASP A 70 ASN A 84 1 ? 15 HELX_P HELX_P6 6 ARG A 91 ? PHE A 94 ? ARG A 85 PHE A 88 5 ? 4 HELX_P HELX_P7 7 THR A 95 ? HIS A 117 ? THR A 89 HIS A 111 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A SER 9 C ? ? ? 1_555 A MSE 10 N ? ? A SER 3 A MSE 4 1_555 ? ? ? ? ? ? ? 1.335 ? covale2 covale ? ? A MSE 10 C ? ? ? 1_555 A ASP 11 N ? ? A MSE 4 A ASP 5 1_555 ? ? ? ? ? ? ? 1.333 ? covale3 covale ? ? A LEU 59 C ? ? ? 1_555 A MSE 60 N ? ? A LEU 53 A MSE 54 1_555 ? ? ? ? ? ? ? 1.318 ? covale4 covale ? ? A MSE 60 C ? ? ? 1_555 A GLY 61 N ? ? A MSE 54 A GLY 55 1_555 ? ? ? ? ? ? ? 1.297 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE EDO A 1113' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ACT A 1114' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ARG A 20 ? ARG A 14 . ? 1_555 ? 2 AC1 6 GLU A 40 ? GLU A 34 . ? 1_555 ? 3 AC1 6 SER A 67 ? SER A 61 . ? 3_656 ? 4 AC1 6 ARG A 68 ? ARG A 62 . ? 3_656 ? 5 AC1 6 ALA A 71 ? ALA A 65 . ? 3_656 ? 6 AC1 6 LEU A 109 ? LEU A 103 . ? 3_656 ? 7 AC2 4 HIS A 35 ? HIS A 29 . ? 1_555 ? 8 AC2 4 ARG A 68 ? ARG A 62 . ? 3_656 ? 9 AC2 4 HOH E . ? HOH A 2065 . ? 1_555 ? 10 AC2 4 HOH E . ? HOH A 2131 . ? 1_555 ? # _database_PDB_matrix.entry_id 5AIZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5AIZ _atom_sites.fract_transf_matrix[1][1] 0.023003 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022202 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017386 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -5 ? ? ? A . n A 1 2 PRO 2 -4 ? ? ? A . n A 1 3 ALA 3 -3 ? ? ? A . n A 1 4 MSE 4 -2 ? ? ? A . n A 1 5 ALA 5 -1 ? ? ? A . n A 1 6 HIS 6 0 ? ? ? A . n A 1 7 MSE 7 1 ? ? ? A . n A 1 8 ASN 8 2 ? ? ? A . n A 1 9 SER 9 3 3 SER SER A . n A 1 10 MSE 10 4 4 MSE MSE A . n A 1 11 ASP 11 5 5 ASP ASP A . n A 1 12 ARG 12 6 6 ARG ARG A . n A 1 13 HIS 13 7 7 HIS HIS A . n A 1 14 ILE 14 8 8 ILE ILE A . n A 1 15 GLN 15 9 9 GLN GLN A . n A 1 16 GLN 16 10 10 GLN GLN A . n A 1 17 THR 17 11 11 THR THR A . n A 1 18 ASN 18 12 12 ASN ASN A . n A 1 19 ASP 19 13 13 ASP ASP A . n A 1 20 ARG 20 14 14 ARG ARG A . n A 1 21 LEU 21 15 15 LEU LEU A . n A 1 22 GLN 22 16 16 GLN GLN A . n A 1 23 CYS 23 17 17 CYS CYS A . n A 1 24 ILE 24 18 18 ILE ILE A . n A 1 25 LYS 25 19 19 LYS LYS A . n A 1 26 GLN 26 20 20 GLN GLN A . n A 1 27 HIS 27 21 21 HIS HIS A . n A 1 28 LEU 28 22 22 LEU LEU A . n A 1 29 GLN 29 23 23 GLN GLN A . n A 1 30 ASN 30 24 24 ASN ASN A . n A 1 31 PRO 31 25 25 PRO PRO A . n A 1 32 ALA 32 26 26 ALA ALA A . n A 1 33 ASN 33 27 27 ASN ASN A . n A 1 34 PHE 34 28 28 PHE PHE A . n A 1 35 HIS 35 29 29 HIS HIS A . n A 1 36 ASN 36 30 30 ASN ASN A . n A 1 37 ALA 37 31 31 ALA ALA A . n A 1 38 ALA 38 32 32 ALA ALA A . n A 1 39 THR 39 33 33 THR THR A . n A 1 40 GLU 40 34 34 GLU GLU A . n A 1 41 LEU 41 35 35 LEU LEU A . n A 1 42 LEU 42 36 36 LEU LEU A . n A 1 43 ASP 43 37 37 ASP ASP A . n A 1 44 TRP 44 38 38 TRP TRP A . n A 1 45 CYS 45 39 39 CYS CYS A . n A 1 46 GLY 46 40 40 GLY GLY A . n A 1 47 ASP 47 41 41 ASP ASP A . n A 1 48 PRO 48 42 42 PRO PRO A . n A 1 49 ARG 49 43 43 ARG ARG A . n A 1 50 ALA 50 44 44 ALA ALA A . n A 1 51 PHE 51 45 45 PHE PHE A . n A 1 52 GLN 52 46 46 GLN GLN A . n A 1 53 ARG 53 47 47 ARG ARG A . n A 1 54 PRO 54 48 48 PRO PRO A . n A 1 55 PHE 55 49 49 PHE PHE A . n A 1 56 GLU 56 50 50 GLU GLU A . n A 1 57 GLN 57 51 51 GLN GLN A . n A 1 58 SER 58 52 52 SER SER A . n A 1 59 LEU 59 53 53 LEU LEU A . n A 1 60 MSE 60 54 54 MSE MSE A . n A 1 61 GLY 61 55 55 GLY GLY A . n A 1 62 CYS 62 56 56 CYS CYS A . n A 1 63 LEU 63 57 57 LEU LEU A . n A 1 64 THR 64 58 58 THR THR A . n A 1 65 VAL 65 59 59 VAL VAL A . n A 1 66 VAL 66 60 60 VAL VAL A . n A 1 67 SER 67 61 61 SER SER A . n A 1 68 ARG 68 62 62 ARG ARG A . n A 1 69 VAL 69 63 63 VAL VAL A . n A 1 70 ALA 70 64 64 ALA ALA A . n A 1 71 ALA 71 65 65 ALA ALA A . n A 1 72 GLN 72 66 66 GLN GLN A . n A 1 73 GLN 73 67 67 GLN GLN A . n A 1 74 GLY 74 68 68 GLY GLY A . n A 1 75 PHE 75 69 69 PHE PHE A . n A 1 76 ASP 76 70 70 ASP ASP A . n A 1 77 LEU 77 71 71 LEU LEU A . n A 1 78 ASP 78 72 72 ASP ASP A . n A 1 79 LEU 79 73 73 LEU LEU A . n A 1 80 GLY 80 74 74 GLY GLY A . n A 1 81 TYR 81 75 75 TYR TYR A . n A 1 82 ARG 82 76 76 ARG ARG A . n A 1 83 LEU 83 77 77 LEU LEU A . n A 1 84 LEU 84 78 78 LEU LEU A . n A 1 85 ALA 85 79 79 ALA ALA A . n A 1 86 VAL 86 80 80 VAL VAL A . n A 1 87 CYS 87 81 81 CYS CYS A . n A 1 88 ALA 88 82 82 ALA ALA A . n A 1 89 ALA 89 83 83 ALA ALA A . n A 1 90 ASN 90 84 84 ASN ASN A . n A 1 91 ARG 91 85 85 ARG ARG A . n A 1 92 ASP 92 86 86 ASP ASP A . n A 1 93 LYS 93 87 87 LYS LYS A . n A 1 94 PHE 94 88 88 PHE PHE A . n A 1 95 THR 95 89 89 THR THR A . n A 1 96 PRO 96 90 90 PRO PRO A . n A 1 97 LYS 97 91 91 LYS LYS A . n A 1 98 SER 98 92 92 SER SER A . n A 1 99 ALA 99 93 93 ALA ALA A . n A 1 100 ALA 100 94 94 ALA ALA A . n A 1 101 LEU 101 95 95 LEU LEU A . n A 1 102 LEU 102 96 96 LEU LEU A . n A 1 103 SER 103 97 97 SER SER A . n A 1 104 SER 104 98 98 SER SER A . n A 1 105 TRP 105 99 99 TRP TRP A . n A 1 106 CYS 106 100 100 CYS CYS A . n A 1 107 GLU 107 101 101 GLU GLU A . n A 1 108 GLU 108 102 102 GLU GLU A . n A 1 109 LEU 109 103 103 LEU LEU A . n A 1 110 GLY 110 104 104 GLY GLY A . n A 1 111 ARG 111 105 105 ARG ARG A . n A 1 112 LEU 112 106 106 LEU LEU A . n A 1 113 LEU 113 107 107 LEU LEU A . n A 1 114 LEU 114 108 108 LEU LEU A . n A 1 115 LEU 115 109 109 LEU LEU A . n A 1 116 ARG 116 110 110 ARG ARG A . n A 1 117 HIS 117 111 111 HIS HIS A . n A 1 118 GLN 118 112 112 GLN GLN A . n A 1 119 LYS 119 113 ? ? ? A . n A 1 120 SER 120 114 ? ? ? A . n A 1 121 ARG 121 115 ? ? ? A . n A 1 122 GLN 122 116 ? ? ? A . n A 1 123 SER 123 117 ? ? ? A . n A 1 124 ASP 124 118 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UNX 1 1115 1115 UNX UNX A . C 3 EDO 1 1113 1113 EDO EDO A . D 4 ACT 1 1114 1114 ACT ACT A . E 5 HOH 1 2001 2001 HOH HOH A . E 5 HOH 2 2002 2002 HOH HOH A . E 5 HOH 3 2003 2003 HOH HOH A . E 5 HOH 4 2004 2004 HOH HOH A . E 5 HOH 5 2005 2005 HOH HOH A . E 5 HOH 6 2006 2006 HOH HOH A . E 5 HOH 7 2007 2007 HOH HOH A . E 5 HOH 8 2008 2008 HOH HOH A . E 5 HOH 9 2009 2009 HOH HOH A . E 5 HOH 10 2010 2010 HOH HOH A . E 5 HOH 11 2011 2011 HOH HOH A . E 5 HOH 12 2012 2012 HOH HOH A . E 5 HOH 13 2013 2013 HOH HOH A . E 5 HOH 14 2014 2014 HOH HOH A . E 5 HOH 15 2015 2015 HOH HOH A . E 5 HOH 16 2016 2016 HOH HOH A . E 5 HOH 17 2017 2017 HOH HOH A . E 5 HOH 18 2018 2018 HOH HOH A . E 5 HOH 19 2019 2019 HOH HOH A . E 5 HOH 20 2020 2020 HOH HOH A . E 5 HOH 21 2021 2021 HOH HOH A . E 5 HOH 22 2022 2022 HOH HOH A . E 5 HOH 23 2023 2023 HOH HOH A . E 5 HOH 24 2024 2024 HOH HOH A . E 5 HOH 25 2025 2025 HOH HOH A . E 5 HOH 26 2026 2026 HOH HOH A . E 5 HOH 27 2027 2027 HOH HOH A . E 5 HOH 28 2028 2028 HOH HOH A . E 5 HOH 29 2029 2029 HOH HOH A . E 5 HOH 30 2030 2030 HOH HOH A . E 5 HOH 31 2031 2031 HOH HOH A . E 5 HOH 32 2032 2032 HOH HOH A . E 5 HOH 33 2033 2033 HOH HOH A . E 5 HOH 34 2034 2034 HOH HOH A . E 5 HOH 35 2035 2035 HOH HOH A . E 5 HOH 36 2036 2036 HOH HOH A . E 5 HOH 37 2037 2037 HOH HOH A . E 5 HOH 38 2038 2038 HOH HOH A . E 5 HOH 39 2039 2039 HOH HOH A . E 5 HOH 40 2040 2040 HOH HOH A . E 5 HOH 41 2041 2041 HOH HOH A . E 5 HOH 42 2042 2042 HOH HOH A . E 5 HOH 43 2043 2043 HOH HOH A . E 5 HOH 44 2044 2044 HOH HOH A . E 5 HOH 45 2045 2045 HOH HOH A . E 5 HOH 46 2046 2046 HOH HOH A . E 5 HOH 47 2047 2047 HOH HOH A . E 5 HOH 48 2048 2048 HOH HOH A . E 5 HOH 49 2049 2049 HOH HOH A . E 5 HOH 50 2050 2050 HOH HOH A . E 5 HOH 51 2051 2051 HOH HOH A . E 5 HOH 52 2052 2052 HOH HOH A . E 5 HOH 53 2053 2053 HOH HOH A . E 5 HOH 54 2054 2054 HOH HOH A . E 5 HOH 55 2055 2055 HOH HOH A . E 5 HOH 56 2056 2056 HOH HOH A . E 5 HOH 57 2057 2057 HOH HOH A . E 5 HOH 58 2058 2058 HOH HOH A . E 5 HOH 59 2059 2059 HOH HOH A . E 5 HOH 60 2060 2060 HOH HOH A . E 5 HOH 61 2061 2061 HOH HOH A . E 5 HOH 62 2062 2062 HOH HOH A . E 5 HOH 63 2063 2063 HOH HOH A . E 5 HOH 64 2064 2064 HOH HOH A . E 5 HOH 65 2065 2065 HOH HOH A . E 5 HOH 66 2066 2066 HOH HOH A . E 5 HOH 67 2067 2067 HOH HOH A . E 5 HOH 68 2068 2068 HOH HOH A . E 5 HOH 69 2069 2069 HOH HOH A . E 5 HOH 70 2070 2070 HOH HOH A . E 5 HOH 71 2071 2071 HOH HOH A . E 5 HOH 72 2072 2072 HOH HOH A . E 5 HOH 73 2073 2073 HOH HOH A . E 5 HOH 74 2074 2074 HOH HOH A . E 5 HOH 75 2075 2075 HOH HOH A . E 5 HOH 76 2076 2076 HOH HOH A . E 5 HOH 77 2077 2077 HOH HOH A . E 5 HOH 78 2078 2078 HOH HOH A . E 5 HOH 79 2079 2079 HOH HOH A . E 5 HOH 80 2080 2080 HOH HOH A . E 5 HOH 81 2081 2081 HOH HOH A . E 5 HOH 82 2082 2082 HOH HOH A . E 5 HOH 83 2083 2083 HOH HOH A . E 5 HOH 84 2084 2084 HOH HOH A . E 5 HOH 85 2085 2085 HOH HOH A . E 5 HOH 86 2086 2086 HOH HOH A . E 5 HOH 87 2087 2087 HOH HOH A . E 5 HOH 88 2088 2088 HOH HOH A . E 5 HOH 89 2089 2089 HOH HOH A . E 5 HOH 90 2090 2090 HOH HOH A . E 5 HOH 91 2091 2091 HOH HOH A . E 5 HOH 92 2092 2092 HOH HOH A . E 5 HOH 93 2093 2093 HOH HOH A . E 5 HOH 94 2094 2094 HOH HOH A . E 5 HOH 95 2095 2095 HOH HOH A . E 5 HOH 96 2096 2096 HOH HOH A . E 5 HOH 97 2097 2097 HOH HOH A . E 5 HOH 98 2098 2098 HOH HOH A . E 5 HOH 99 2099 2099 HOH HOH A . E 5 HOH 100 2100 2100 HOH HOH A . E 5 HOH 101 2101 2101 HOH HOH A . E 5 HOH 102 2102 2102 HOH HOH A . E 5 HOH 103 2103 2103 HOH HOH A . E 5 HOH 104 2104 2104 HOH HOH A . E 5 HOH 105 2105 2105 HOH HOH A . E 5 HOH 106 2106 2106 HOH HOH A . E 5 HOH 107 2107 2107 HOH HOH A . E 5 HOH 108 2108 2108 HOH HOH A . E 5 HOH 109 2109 2109 HOH HOH A . E 5 HOH 110 2110 2110 HOH HOH A . E 5 HOH 111 2111 2111 HOH HOH A . E 5 HOH 112 2112 2112 HOH HOH A . E 5 HOH 113 2113 2113 HOH HOH A . E 5 HOH 114 2114 2114 HOH HOH A . E 5 HOH 115 2115 2115 HOH HOH A . E 5 HOH 116 2116 2116 HOH HOH A . E 5 HOH 117 2117 2117 HOH HOH A . E 5 HOH 118 2118 2118 HOH HOH A . E 5 HOH 119 2119 2119 HOH HOH A . E 5 HOH 120 2120 2120 HOH HOH A . E 5 HOH 121 2121 2121 HOH HOH A . E 5 HOH 122 2122 2122 HOH HOH A . E 5 HOH 123 2123 2123 HOH HOH A . E 5 HOH 124 2124 2124 HOH HOH A . E 5 HOH 125 2125 2125 HOH HOH A . E 5 HOH 126 2126 2126 HOH HOH A . E 5 HOH 127 2127 2127 HOH HOH A . E 5 HOH 128 2128 2128 HOH HOH A . E 5 HOH 129 2129 2129 HOH HOH A . E 5 HOH 130 2130 2130 HOH HOH A . E 5 HOH 131 2131 2131 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 10 A MSE 4 ? MET SELENOMETHIONINE 2 A MSE 60 A MSE 54 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-10-28 2 'Structure model' 1 1 2015-11-11 3 'Structure model' 1 2 2015-12-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.8.0073 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 HKL-3000 phasing . ? 4 # _pdbx_entry_details.entry_id 5AIZ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;ZMIZ1 NTD WITH ADDITIONAL GPAMAH SEQUENCE AT THE N- TERMINUS DUE TO CLONING PROCEDURE. ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2032 ? ? O A HOH 2073 ? ? 2.03 2 1 O A HOH 2021 ? ? O A HOH 2022 ? ? 2.07 3 1 OG A SER 3 ? ? O A HOH 2002 ? ? 2.09 4 1 O A HOH 2049 ? ? O A HOH 2050 ? ? 2.13 5 1 OD1 A ASP 86 ? A O A HOH 2115 ? ? 2.16 6 1 O A HOH 2073 ? ? O A HOH 2075 ? ? 2.17 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 50 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 50 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.326 _pdbx_validate_rmsd_bond.bond_target_value 1.252 _pdbx_validate_rmsd_bond.bond_deviation 0.074 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 14 ? ? CZ A ARG 14 ? ? NH2 A ARG 14 ? ? 115.80 120.30 -4.50 0.50 N 2 1 CB A ASP 70 ? ? CG A ASP 70 ? ? OD1 A ASP 70 ? ? 124.38 118.30 6.08 0.90 N 3 1 NE A ARG 76 ? ? CZ A ARG 76 ? ? NH2 A ARG 76 ? ? 116.98 120.30 -3.32 0.50 N 4 1 CB A ASP 86 ? B CG A ASP 86 ? B OD1 A ASP 86 ? B 124.28 118.30 5.98 0.90 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 105 ? CG ? A ARG 111 CG 2 1 Y 1 A ARG 105 ? CD ? A ARG 111 CD 3 1 Y 1 A ARG 105 ? NE ? A ARG 111 NE 4 1 Y 1 A ARG 105 ? CZ ? A ARG 111 CZ 5 1 Y 1 A ARG 105 ? NH1 ? A ARG 111 NH1 6 1 Y 1 A ARG 105 ? NH2 ? A ARG 111 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -5 ? A GLY 1 2 1 Y 1 A PRO -4 ? A PRO 2 3 1 Y 1 A ALA -3 ? A ALA 3 4 1 Y 1 A MSE -2 ? A MSE 4 5 1 Y 1 A ALA -1 ? A ALA 5 6 1 Y 1 A HIS 0 ? A HIS 6 7 1 Y 1 A MSE 1 ? A MSE 7 8 1 Y 1 A ASN 2 ? A ASN 8 9 1 Y 1 A LYS 113 ? A LYS 119 10 1 Y 1 A SER 114 ? A SER 120 11 1 Y 1 A ARG 115 ? A ARG 121 12 1 Y 1 A GLN 116 ? A GLN 122 13 1 Y 1 A SER 117 ? A SER 123 14 1 Y 1 A ASP 118 ? A ASP 124 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'UNKNOWN ATOM OR ION' UNX 3 1,2-ETHANEDIOL EDO 4 'ACETATE ION' ACT 5 water HOH #