HEADER TRANSPORT PROTEIN 01-SEP-15 5AMT TITLE INTRACELLULAR GROWTH LOCUS PROTEIN E COMPND MOL_ID: 1; COMPND 2 MOLECULE: IGLE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 25-125; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FRANCISELLA NOVICIDA; SOURCE 3 ORGANISM_TAXID: 264; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS TRANSPORT PROTEIN, BACTERIAL SECRETION SYSTEM, LIPOPROTEIN, IGLE, KEYWDS 2 TSSJ, FRANCISELLA NOVICIDA EXPDTA X-RAY DIFFRACTION AUTHOR C.S.ROBB,F.E.NANO,A.B.BORASTON REVDAT 3 08-MAY-24 5AMT 1 JRNL REMARK REVDAT 2 16-NOV-16 5AMT 1 REMARK REVDAT 1 05-OCT-16 5AMT 0 JRNL AUTH C.S.ROBB,F.E.NANO,A.B.BORASTON JRNL TITL CLONING, EXPRESSION, PURIFICATION, CRYSTALLIZATION AND JRNL TITL 2 PRELIMINARY X-RAY DIFFRACTION ANALYSIS OF INTRACELLULAR JRNL TITL 3 GROWTH LOCUS E (IGLE) PROTEIN FROM FRANCISELLA TULARENSIS JRNL TITL 4 SUBSP. NOVICIDA. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 66 1596 2010 JRNL REFN ESSN 1744-3091 JRNL PMID 21139203 JRNL DOI 10.1107/S1744309110034378 REMARK 2 REMARK 2 RESOLUTION. 1.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23199 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1248 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.62 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.66 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1678 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2000 REMARK 3 BIN FREE R VALUE SET COUNT : 91 REMARK 3 BIN FREE R VALUE : 0.2340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1699 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 286 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.22000 REMARK 3 B22 (A**2) : -0.42000 REMARK 3 B33 (A**2) : 0.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.098 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.094 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.565 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1744 ; 0.024 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1649 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2357 ; 2.213 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3824 ; 0.976 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 210 ; 8.083 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 85 ;39.647 ;26.471 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 328 ;14.324 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ; 6.887 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 259 ; 0.146 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1956 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 378 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 5AMT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1290064866. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 113 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL8-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91946, 0.91968, 0.89841 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24487 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.620 REMARK 200 RESOLUTION RANGE LOW (A) : 44.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.30 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.62 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 14.30 REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 21.65500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.80500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.65500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.80500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 43.31000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2068 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2012 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 SER B 11 REMARK 465 SER B 12 REMARK 465 GLY B 13 REMARK 465 LEU B 14 REMARK 465 VAL B 15 REMARK 465 PRO B 16 REMARK 465 ARG B 17 REMARK 465 GLY B 18 REMARK 465 SER B 19 REMARK 465 HIS B 20 REMARK 465 GLY B 21 REMARK 465 SER B 22 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 55 CG CD OE1 NE2 REMARK 470 GLU A 123 CG CD OE1 OE2 REMARK 470 ASP A 125 CG OD1 OD2 REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 LYS B 85 CG CD CE NZ REMARK 470 GLU B 123 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2080 O HOH B 2081 1.89 REMARK 500 OD1 ASN B 70 O HOH B 2031 1.93 REMARK 500 O HOH A 2110 O HOH A 2111 2.00 REMARK 500 O HOH B 2016 O HOH B 2130 2.01 REMARK 500 O HOH A 2051 O HOH A 2092 2.01 REMARK 500 CB GLN A 55 O HOH A 2065 2.06 REMARK 500 O ASN B 70 O HOH B 2079 2.10 REMARK 500 O HOH B 2071 O HOH B 2073 2.10 REMARK 500 OE1 GLU B 113 O HOH B 2126 2.18 REMARK 500 O HOH A 2046 O HOH A 2047 2.18 REMARK 500 OD2 ASP B 63 O HOH B 2065 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2066 O HOH B 2008 1556 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 41 CD GLU B 41 OE1 -0.075 REMARK 500 LYS B 103 CB LYS B 103 CG -0.167 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 24 CG - SD - CE ANGL. DEV. = -11.2 DEGREES REMARK 500 ASP A 81 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 119 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 101 64.50 -104.51 REMARK 500 ASP B 109 46.76 -96.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS B 124 ASP B 125 -146.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1126 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 1127 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 1128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 1129 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 1130 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 1131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B 1126 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B 1127 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B 1128 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B 1129 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B 1130 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5AMU RELATED DB: PDB REMARK 900 IGLE I39A,Y40A,V44A REMARK 999 REMARK 999 SEQUENCE REMARK 999 LACKING SIGNAL PEPTIDE DBREF 5AMT A 25 125 UNP A0Q7H2 A0Q7H2_FRATN 25 125 DBREF 5AMT B 25 125 UNP A0Q7H2 A0Q7H2_FRATN 25 125 SEQADV 5AMT MET A 1 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT GLY A 2 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT SER A 3 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT SER A 4 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS A 5 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS A 6 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS A 7 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS A 8 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS A 9 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS A 10 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT SER A 11 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT SER A 12 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT GLY A 13 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT LEU A 14 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT VAL A 15 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT PRO A 16 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT ARG A 17 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT GLY A 18 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT SER A 19 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS A 20 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT GLY A 21 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT SER A 22 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS A 23 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT MET A 24 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT MET B 1 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT GLY B 2 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT SER B 3 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT SER B 4 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS B 5 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS B 6 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS B 7 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS B 8 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS B 9 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS B 10 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT SER B 11 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT SER B 12 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT GLY B 13 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT LEU B 14 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT VAL B 15 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT PRO B 16 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT ARG B 17 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT GLY B 18 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT SER B 19 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS B 20 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT GLY B 21 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT SER B 22 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT HIS B 23 UNP A0Q7H2 EXPRESSION TAG SEQADV 5AMT MET B 24 UNP A0Q7H2 EXPRESSION TAG SEQRES 1 A 125 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 125 LEU VAL PRO ARG GLY SER HIS GLY SER HIS MET ASP GLY SEQRES 3 A 125 LEU TYR ILE ASN ASN ASN ILE PRO LYS THR LYS ILE VAL SEQRES 4 A 125 LEU GLU SER LYS PRO ASP LYS ASN ILE PHE TYR SER ASP SEQRES 5 A 125 ASN TYR GLN SER ILE SER GLN ARG ILE TYR ASP ASP ASN SEQRES 6 A 125 VAL LYS VAL LEU ASN LEU LYS THR GLY LYS ASN GLU PHE SEQRES 7 A 125 PRO LEU ASP LYS ASP ILE LYS ASP TYR ALA LEU TYR PHE SEQRES 8 A 125 ILE LEU PRO GLU ASN LYS LYS THR GLU ASN TRP LYS TYR SEQRES 9 A 125 LEU ILE SER SER ASP SER VAL ASN GLU PHE THR ILE LYS SEQRES 10 A 125 ASN ASP SER SER ILE GLU LYS ASP SEQRES 1 B 125 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 125 LEU VAL PRO ARG GLY SER HIS GLY SER HIS MET ASP GLY SEQRES 3 B 125 LEU TYR ILE ASN ASN ASN ILE PRO LYS THR LYS ILE VAL SEQRES 4 B 125 LEU GLU SER LYS PRO ASP LYS ASN ILE PHE TYR SER ASP SEQRES 5 B 125 ASN TYR GLN SER ILE SER GLN ARG ILE TYR ASP ASP ASN SEQRES 6 B 125 VAL LYS VAL LEU ASN LEU LYS THR GLY LYS ASN GLU PHE SEQRES 7 B 125 PRO LEU ASP LYS ASP ILE LYS ASP TYR ALA LEU TYR PHE SEQRES 8 B 125 ILE LEU PRO GLU ASN LYS LYS THR GLU ASN TRP LYS TYR SEQRES 9 B 125 LEU ILE SER SER ASP SER VAL ASN GLU PHE THR ILE LYS SEQRES 10 B 125 ASN ASP SER SER ILE GLU LYS ASP HET EDO A1126 4 HET BR A1127 1 HET BR A1128 1 HET BR A1129 1 HET BR A1130 1 HET BR A1131 1 HET BR B1126 1 HET BR B1127 1 HET BR B1128 1 HET BR B1129 1 HET BR B1130 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM BR BROMIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO C2 H6 O2 FORMUL 4 BR 10(BR 1-) FORMUL 14 HOH *286(H2 O) HELIX 1 1 ASP A 45 ASP A 52 1 8 HELIX 2 2 ASN A 53 GLN A 59 1 7 HELIX 3 3 ASP B 45 ASP B 52 1 8 HELIX 4 4 ASN B 53 GLN B 59 1 7 SHEET 1 AA 4 GLY A 74 PHE A 78 0 SHEET 2 AA 4 GLY A 26 ASN A 31 -1 O LEU A 27 N PHE A 78 SHEET 3 AA 4 VAL A 111 ILE A 116 1 O ASN A 112 N TYR A 28 SHEET 4 AA 4 ILE A 122 LYS A 124 -1 O GLU A 123 N THR A 115 SHEET 1 AB 4 VAL A 66 ASN A 70 0 SHEET 2 AB 4 LYS A 37 SER A 42 -1 O ILE A 38 N LEU A 69 SHEET 3 AB 4 ASP A 86 ILE A 92 -1 O ALA A 88 N GLU A 41 SHEET 4 AB 4 LYS A 103 SER A 107 -1 O TYR A 104 N LEU A 89 SHEET 1 BA 4 GLY B 74 PHE B 78 0 SHEET 2 BA 4 GLY B 26 ASN B 31 -1 O LEU B 27 N PHE B 78 SHEET 3 BA 4 VAL B 111 ILE B 116 1 O ASN B 112 N TYR B 28 SHEET 4 BA 4 ILE B 122 LYS B 124 -1 O GLU B 123 N THR B 115 SHEET 1 BB 4 VAL B 66 ASN B 70 0 SHEET 2 BB 4 LYS B 37 SER B 42 -1 O ILE B 38 N LEU B 69 SHEET 3 BB 4 ASP B 86 ILE B 92 -1 O ALA B 88 N GLU B 41 SHEET 4 BB 4 LYS B 103 SER B 107 -1 O TYR B 104 N LEU B 89 SITE 1 AC1 4 ASN A 53 TYR A 54 LYS A 98 TRP A 102 SITE 1 AC2 5 THR A 73 HOH A2043 HOH A2047 HOH A2089 SITE 2 AC2 5 GLN B 59 SITE 1 AC3 1 LYS B 82 SITE 1 AC4 2 ASN A 70 HOH A2086 SITE 1 AC5 3 THR A 99 ASN A 101 ILE A 122 SITE 1 AC6 1 HOH A2013 SITE 1 AC7 6 PRO A 79 HOH A2053 ASN B 96 LYS B 98 SITE 2 AC7 6 GLU B 100 HOH B2110 SITE 1 AC8 3 ASN B 96 LYS B 97 HOH B2135 SITE 1 AC9 4 PRO B 34 LYS B 35 LEU B 71 HOH B2011 SITE 1 BC1 3 ASN B 101 ILE B 122 HOH B2112 SITE 1 BC2 1 HOH B2091 CRYST1 43.310 89.610 47.750 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023089 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011159 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020942 0.00000