HEADER TRANSFERASE 09-SEP-15 5AO8 TITLE CRYSTAL STRUCTURE OF SLTB3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH TITLE 2 NAG-NAM-PENTAPEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SOLUBLE LYTIC TRANGLYCOSILASE B3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 33-448; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 ATCC: 15692; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE, CELL WALL RECYCLING EXPDTA X-RAY DIFFRACTION AUTHOR T.DOMINGUEZ-GIL,J.A.HERMOSO REVDAT 4 10-JAN-24 5AO8 1 REMARK HETSYN REVDAT 3 29-JUL-20 5AO8 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 22-AUG-18 5AO8 1 REMARK LINK ATOM REVDAT 1 20-JUL-16 5AO8 0 JRNL AUTH M.LEE,T.DOMINGUEZ-GIL,D.HESEK,K.V.MAHASENAN,E.LASTOCHKIN, JRNL AUTH 2 J.A.HERMOSO,S.MOBASHERY JRNL TITL TURNOVER OF BACTERIAL CELL WALL BY SLTB3, A MULTIDOMAIN JRNL TITL 2 LYTIC TRANSGLYCOSYLASE OF PSEUDOMONAS AERUGINOSA. JRNL REF ACS CHEM.BIOL. V. 11 1525 2016 JRNL REFN ISSN 1554-8929 JRNL PMID 27035839 JRNL DOI 10.1021/ACSCHEMBIO.6B00194 REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 17271 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.7819 - 4.0513 1.00 2891 145 0.1501 0.1877 REMARK 3 2 4.0513 - 3.2157 1.00 2744 155 0.1662 0.2325 REMARK 3 3 3.2157 - 2.8093 1.00 2707 144 0.2030 0.2868 REMARK 3 4 2.8093 - 2.5524 1.00 2696 135 0.2130 0.2688 REMARK 3 5 2.5524 - 2.3695 1.00 2658 156 0.2072 0.2677 REMARK 3 6 2.3695 - 2.2298 1.00 2700 140 0.2201 0.2806 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 2981 REMARK 3 ANGLE : 1.588 4053 REMARK 3 CHIRALITY : 0.065 428 REMARK 3 PLANARITY : 0.008 539 REMARK 3 DIHEDRAL : 15.150 1056 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5AO8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1290064989. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL-CUT, CRYOCOOLED REMARK 200 OPTICS : ELLIPTICALLY BENT MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17322 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 61.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.500 REMARK 200 R MERGE (I) : 0.01000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 8.70 REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 5ANZ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 55.55050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.72000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 55.55050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.72000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 HIS A 4 REMARK 465 MET A 5 REMARK 465 GLN A 6 REMARK 465 LYS A 7 REMARK 465 ASN A 8 REMARK 465 PRO A 9 REMARK 465 THR A 10 REMARK 465 VAL A 11 REMARK 465 GLU A 12 REMARK 465 TYR A 13 REMARK 465 ASN A 14 REMARK 465 GLN A 15 REMARK 465 PRO A 16 REMARK 465 ALA A 17 REMARK 465 ALA A 18 REMARK 465 PRO A 19 REMARK 465 LEU A 20 REMARK 465 GLN A 21 REMARK 465 THR A 22 REMARK 465 LYS A 23 REMARK 465 ALA A 24 REMARK 465 PRO A 25 REMARK 465 PHE A 26 REMARK 465 SER A 27 REMARK 465 GLY A 28 REMARK 465 ALA A 29 REMARK 465 GLY A 30 REMARK 465 PRO A 31 REMARK 465 ALA A 32 REMARK 465 ALA A 33 REMARK 465 SER A 34 REMARK 465 VAL A 35 REMARK 465 PRO A 36 REMARK 465 ALA A 37 REMARK 465 GLY A 38 REMARK 465 ALA A 39 REMARK 465 PRO A 40 REMARK 465 ASN A 41 REMARK 465 GLU A 42 REMARK 465 ALA A 43 REMARK 465 GLN A 44 REMARK 465 PRO A 45 REMARK 465 THR A 420 REMARK 465 PRO A 421 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 90 CG CD OE1 NE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 HIS A 151 NE2 REMARK 480 HIS A 187 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 259 O VAL A 288 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HH22 ARG A 111 OE2 GLU A 300 3546 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 89 92.18 -68.75 REMARK 500 PRO A 91 100.80 -47.51 REMARK 500 GLU A 92 -87.26 -59.96 REMARK 500 THR A 94 -149.59 -117.98 REMARK 500 ARG A 95 -129.49 -18.77 REMARK 500 SER A 146 17.45 -141.02 REMARK 500 GLU A 167 27.66 -149.51 REMARK 500 GLU A 270 125.66 -177.86 REMARK 500 PRO A 294 122.32 -35.36 REMARK 500 ASN A 328 112.71 -161.48 REMARK 500 ASP A 357 -84.20 -58.97 REMARK 500 ASP A 358 89.44 28.41 REMARK 500 ILE A 387 83.10 -69.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 221 GLY A 222 34.41 REMARK 500 GLY A 222 ASP A 223 -144.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 219 OD1 REMARK 620 2 ASP A 221 OD1 88.4 REMARK 620 3 ASP A 223 OD1 76.5 98.3 REMARK 620 4 LYS A 225 O 77.8 164.2 86.0 REMARK 620 5 ASP A 234 OD2 115.3 108.8 150.2 71.3 REMARK 620 6 ASP A 234 OD1 88.8 69.2 161.2 102.5 47.6 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ANZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SLTB3 FROM PSEUDOMONAS AERUGINOSA. REMARK 900 RELATED ID: 5AO7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SLTB3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX REMARK 900 WITH NAG-ANHNAM-PENTAPEPTIDE DBREF 5AO8 A 6 421 UNP Q9HX28 Q9HX28_PSEAE 33 448 SEQADV 5AO8 GLY A 2 UNP Q9HX28 EXPRESSION TAG SEQADV 5AO8 SER A 3 UNP Q9HX28 EXPRESSION TAG SEQADV 5AO8 HIS A 4 UNP Q9HX28 EXPRESSION TAG SEQADV 5AO8 MET A 5 UNP Q9HX28 EXPRESSION TAG SEQADV 5AO8 ASP A 357 UNP Q9HX28 GLU 384 CONFLICT SEQRES 1 A 420 GLY SER HIS MET GLN LYS ASN PRO THR VAL GLU TYR ASN SEQRES 2 A 420 GLN PRO ALA ALA PRO LEU GLN THR LYS ALA PRO PHE SER SEQRES 3 A 420 GLY ALA GLY PRO ALA ALA SER VAL PRO ALA GLY ALA PRO SEQRES 4 A 420 ASN GLU ALA GLN PRO GLY GLN SER PHE GLU GLN TRP ARG SEQRES 5 A 420 ASP ALA PHE ARG GLN GLN ALA LEU ALA GLY GLY ILE ASP SEQRES 6 A 420 ALA GLN THR PHE ASP ARG ALA PHE ALA GLY VAL GLN PRO SEQRES 7 A 420 ASP PRO ALA VAL VAL GLU ALA ASP ARG SER GLN PRO GLU SEQRES 8 A 420 PHE THR ARG PRO VAL TRP LYS TYR LEU GLU GLY ALA LEU SEQRES 9 A 420 ASP PRO LEU ARG VAL ARG GLN GLY GLN ALA ARG LEU ALA SEQRES 10 A 420 GLN HIS ALA ARG ILE LEU GLY GLU VAL ASP ALA ARG TYR SEQRES 11 A 420 ALA VAL ASP ALA ASP ALA VAL VAL ALA ILE TRP GLY MET SEQRES 12 A 420 GLU SER ASN TYR GLY SER HIS MET GLY ASN LYS ASN VAL SEQRES 13 A 420 ILE ARG SER LEU ALA THR LEU ALA TYR GLU GLY ARG ARG SEQRES 14 A 420 PRO GLU PHE ALA HIS ALA GLN LEU LEU ALA ALA LEU LYS SEQRES 15 A 420 ILE LEU GLN HIS GLY ASP VAL PRO ALA SER PHE MET ILE SEQRES 16 A 420 GLY SER TRP ALA GLY ALA MET GLY GLN THR GLN PHE ILE SEQRES 17 A 420 PRO THR THR HIS ASN GLN TYR ALA VAL ASP PHE ASP GLY SEQRES 18 A 420 ASP GLY LYS ARG ASP ILE TRP GLY SER PRO GLY ASP ALA SEQRES 19 A 420 LEU ALA SER THR ALA ASN TYR LEU LYS ALA SER GLY TRP SEQRES 20 A 420 ILE ALA GLY GLN PRO TRP GLY PHE GLU VAL ARG LEU PRO SEQRES 21 A 420 ALA GLY PHE ASP TYR SER LEU ALA GLU LEU THR ILE ARG SEQRES 22 A 420 LYS PRO LEU GLY GLU TRP GLN GLY MET GLY VAL GLN GLY SEQRES 23 A 420 VAL ASN GLY GLY PRO LEU PRO SER GLY LEU SER GLY GLU SEQRES 24 A 420 GLN ALA SER LEU LEU LEU PRO ALA GLY HIS ARG GLY PRO SEQRES 25 A 420 ALA PHE LEU VAL LEU HIS ASN PHE ARG ALA ILE LEU LYS SEQRES 26 A 420 TYR ASN ASN SER SER ALA TYR ALA LEU ALA VAL GLY LEU SEQRES 27 A 420 LEU ALA ASP SER PHE LYS GLY GLY GLY ARG ILE VAL GLY SEQRES 28 A 420 ALA TRP PRO LEU ASP ASP VAL PRO LEU SER ARG SER GLN SEQRES 29 A 420 ARG ILE GLU LEU GLN ARG GLN LEU ALA ALA ARG GLY HIS SEQRES 30 A 420 ASP PRO GLY ALA VAL ASP GLY ILE ILE GLY ALA ASN THR SEQRES 31 A 420 ARG LYS ALA ILE ARG ALA CYS GLN GLN GLU PHE GLY TRP SEQRES 32 A 420 PRO ALA ASP GLY TYR PRO THR PRO ALA LEU LEU ASP ARG SEQRES 33 A 420 LEU ARG THR PRO HET NM9 B 1 42 HET NAG B 2 28 HET CA A 501 1 HET NAG A 502 30 HETNAM NM9 METHYL 2-ACETAMIDO-3-O-[(2R)-1-AMINO-1-OXOPROPAN-2-YL]- HETNAM 2 NM9 2-DEOXY-BETA-D-GLUCOPYRANOSIDE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETSYN NM9 (2R)-2-[(2R,3S,4R,5R,6R)-5-ACETAMIDO-2-(HYDROXYMETHYL)- HETSYN 2 NM9 6-METHOXY-3-OXIDANYL-OXAN-4-YL]OXYPROPANAMIDE; METHYL HETSYN 3 NM9 2-ACETAMIDO-3-O-[(2R)-1-AMINO-1-OXOPROPAN-2-YL]-2- HETSYN 4 NM9 DEOXY-BETA-D-GLUCOSIDE; METHYL 2-ACETAMIDO-3-O-[(2R)- HETSYN 5 NM9 1-AMINO-1-OXOPROPAN-2-YL]-2-DEOXY-D-GLUCOSIDE; METHYL HETSYN 6 NM9 2-ACETAMIDO-3-O-[(2R)-1-AMINO-1-OXOPROPAN-2-YL]-2- HETSYN 7 NM9 DEOXY-GLUCOSIDE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NM9 C12 H22 N2 O7 FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 3 CA CA 2+ HELIX 1 1 SER A 48 GLY A 63 1 16 HELIX 2 2 ASP A 66 ALA A 75 1 10 HELIX 3 3 ASP A 80 SER A 89 1 10 HELIX 4 4 PRO A 96 LEU A 105 1 10 HELIX 5 5 ASP A 106 HIS A 120 1 15 HELIX 6 6 HIS A 120 ALA A 132 1 13 HELIX 7 7 ASP A 134 ASN A 147 1 14 HELIX 8 8 VAL A 157 GLY A 168 1 12 HELIX 9 9 ARG A 170 GLY A 188 1 19 HELIX 10 10 PRO A 191 PHE A 194 5 4 HELIX 11 11 ILE A 209 ALA A 217 1 9 HELIX 12 12 SER A 231 SER A 246 1 16 HELIX 13 13 ASP A 265 ALA A 269 5 5 HELIX 14 14 LEU A 277 GLY A 282 1 6 HELIX 15 15 LEU A 318 ASN A 328 1 11 HELIX 16 16 SER A 330 PHE A 344 1 15 HELIX 17 17 SER A 362 ARG A 376 1 15 HELIX 18 18 GLY A 388 PHE A 402 1 15 HELIX 19 19 THR A 411 LEU A 418 1 8 SHEET 1 AA 2 LYS A 155 ASN A 156 0 SHEET 2 AA 2 ILE A 196 GLY A 197 -1 O GLY A 197 N LYS A 155 SHEET 1 AB 5 LYS A 275 PRO A 276 0 SHEET 2 AB 5 GLN A 301 LEU A 305 -1 O ALA A 302 N LYS A 275 SHEET 3 AB 5 ALA A 314 VAL A 317 -1 O PHE A 315 N LEU A 305 SHEET 4 AB 5 GLY A 255 ARG A 259 -1 O PHE A 256 N LEU A 316 SHEET 5 AB 5 GLN A 286 GLY A 287 -1 O GLN A 286 N ARG A 259 LINK O4 NM9 B 1 C1 NAG B 2 1555 1555 1.46 LINK OD1 ASP A 219 CA CA A 501 1555 1555 2.36 LINK OD1 ASP A 221 CA CA A 501 1555 1555 2.48 LINK OD1 ASP A 223 CA CA A 501 1555 1555 2.42 LINK O LYS A 225 CA CA A 501 1555 1555 2.37 LINK OD2 ASP A 234 CA CA A 501 1555 1555 2.46 LINK OD1 ASP A 234 CA CA A 501 1555 1555 2.90 CISPEP 1 ARG A 95 PRO A 96 0 -6.36 CRYST1 111.101 61.440 49.870 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009001 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016276 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020052 0.00000