HEADER TRANSFERASE 14-SEP-15 5AP7 TITLE NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO TITLE 2 KINASE INHIBITOR DRUG RESISTANCE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MONOPOLAR SPINDLE KINASE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 519-808; COMPND 5 SYNONYM: PHOSPHOTYROSINE PICKED THREONINE-PROTEIN KINASE, PYT, COMPND 6 MONOPOLAR SPINDLE KINASE 1; COMPND 7 EC: 2.7.12.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: AI KEYWDS TRANSFERASE, MPS1, MITOSIS EXPDTA X-RAY DIFFRACTION AUTHOR M.D.GURDEN,I.M.WESTWOOD,A.FAISAL,S.NAUD,K.M.CHEUNG,C.MCANDREW,A.WOOD, AUTHOR 2 J.SCHMITT,K.BOXALL,G.MAK,P.WORKMAN,R.BURKE,S.HOELDER,J.BLAGG,R.VAN AUTHOR 3 MONTFORT,S.LINARDOPOULOS REVDAT 2 10-JAN-24 5AP7 1 REMARK REVDAT 1 23-SEP-15 5AP7 0 JRNL AUTH M.D.GURDEN,I.M.WESTWOOD,A.FAISAL,S.NAUD,K.J.CHEUNG, JRNL AUTH 2 C.MCANDREW,A.WOOD,J.SCHMITT,K.BOXALL,G.MAK,P.WORKMAN, JRNL AUTH 3 R.BURKE,S.HOELDER,J.BLAGG,R.L.M.VAN MONTFORT,S.LINARDOPOULOS JRNL TITL NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE JRNL TITL 2 CELLS TO KINASE INHIBITOR DRUG RESISTANCE. JRNL REF CANCER RES. V. 75 3340 2015 JRNL REFN ISSN 0008-5472 JRNL PMID 26202014 JRNL DOI 10.1158/0008-5472.CAN-14-3272 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 17192 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 873 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.60 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.24 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2738 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2336 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2574 REMARK 3 BIN R VALUE (WORKING SET) : 0.2318 REMARK 3 BIN FREE R VALUE : 0.2602 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.99 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 164 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2060 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 73 REMARK 3 SOLVENT ATOMS : 41 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 73.78 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.13880 REMARK 3 B22 (A**2) : -2.72170 REMARK 3 B33 (A**2) : -4.41710 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.336 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.228 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.201 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.231 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.204 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2182 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2955 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 743 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 52 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 338 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2182 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 285 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2383 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.11 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.93 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.53 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|509 - 544} REMARK 3 ORIGIN FOR THE GROUP (A): 9.4734 -5.3428 -19.4139 REMARK 3 T TENSOR REMARK 3 T11: -0.1292 T22: -0.3000 REMARK 3 T33: 0.2325 T12: 0.0201 REMARK 3 T13: 0.0290 T23: -0.1014 REMARK 3 L TENSOR REMARK 3 L11: 5.5422 L22: 8.0596 REMARK 3 L33: 3.8883 L12: 2.7767 REMARK 3 L13: 0.5470 L23: 2.9013 REMARK 3 S TENSOR REMARK 3 S11: -0.0296 S12: -0.2056 S13: 0.3244 REMARK 3 S21: 0.2156 S22: 0.1315 S23: -0.5282 REMARK 3 S31: -0.3195 S32: 0.3484 S33: -0.1019 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|545 - 561} REMARK 3 ORIGIN FOR THE GROUP (A): 10.5382 -11.9310 -22.5823 REMARK 3 T TENSOR REMARK 3 T11: -0.0623 T22: -0.1331 REMARK 3 T33: 0.1348 T12: 0.0781 REMARK 3 T13: -0.0533 T23: -0.1491 REMARK 3 L TENSOR REMARK 3 L11: 3.2967 L22: 3.2200 REMARK 3 L33: 0.1552 L12: 1.4959 REMARK 3 L13: -2.9104 L23: 2.7993 REMARK 3 S TENSOR REMARK 3 S11: 0.0590 S12: -0.0183 S13: 0.0055 REMARK 3 S21: -0.0233 S22: 0.2540 S23: -0.3774 REMARK 3 S31: -0.2480 S32: 0.5026 S33: -0.3130 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|562 - 578} REMARK 3 ORIGIN FOR THE GROUP (A): 8.9558 -26.6313 -26.2555 REMARK 3 T TENSOR REMARK 3 T11: -0.1569 T22: -0.1217 REMARK 3 T33: 0.2105 T12: 0.0254 REMARK 3 T13: 0.0155 T23: -0.1002 REMARK 3 L TENSOR REMARK 3 L11: 4.1998 L22: 0.9783 REMARK 3 L33: 0.4170 L12: 0.8888 REMARK 3 L13: -2.8379 L23: 2.5043 REMARK 3 S TENSOR REMARK 3 S11: -0.0154 S12: 0.1239 S13: -0.0908 REMARK 3 S21: -0.0895 S22: 0.0650 S23: 0.0423 REMARK 3 S31: 0.0378 S32: 0.0685 S33: -0.0496 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {A|579 - 620} REMARK 3 ORIGIN FOR THE GROUP (A): -0.4069 -14.9283 -22.1653 REMARK 3 T TENSOR REMARK 3 T11: -0.0877 T22: -0.2203 REMARK 3 T33: 0.0564 T12: 0.0663 REMARK 3 T13: -0.0541 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 6.6155 L22: 5.2574 REMARK 3 L33: 4.3364 L12: 0.9818 REMARK 3 L13: -0.9975 L23: 2.7597 REMARK 3 S TENSOR REMARK 3 S11: 0.0619 S12: 0.1852 S13: 0.1704 REMARK 3 S21: 0.1342 S22: 0.1208 S23: -0.4277 REMARK 3 S31: -0.0556 S32: -0.1543 S33: -0.1827 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {A|621 - 641} REMARK 3 ORIGIN FOR THE GROUP (A): -13.6418 -23.5467 -22.7977 REMARK 3 T TENSOR REMARK 3 T11: -0.1849 T22: -0.1081 REMARK 3 T33: 0.1378 T12: 0.0138 REMARK 3 T13: -0.0417 T23: -0.0784 REMARK 3 L TENSOR REMARK 3 L11: 5.6007 L22: 1.2681 REMARK 3 L33: 1.1513 L12: 1.8591 REMARK 3 L13: 1.6931 L23: -1.7846 REMARK 3 S TENSOR REMARK 3 S11: -0.0353 S12: 0.1623 S13: -0.1071 REMARK 3 S21: 0.1046 S22: 0.0622 S23: 0.0384 REMARK 3 S31: -0.0906 S32: -0.1542 S33: -0.0268 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {A|642 - 662} REMARK 3 ORIGIN FOR THE GROUP (A): -5.7323 -20.9889 -19.2934 REMARK 3 T TENSOR REMARK 3 T11: -0.1377 T22: -0.0659 REMARK 3 T33: 0.0619 T12: 0.0206 REMARK 3 T13: 0.0033 T23: -0.0722 REMARK 3 L TENSOR REMARK 3 L11: 7.1601 L22: 2.6102 REMARK 3 L33: 4.5269 L12: 2.8908 REMARK 3 L13: -2.7713 L23: 1.7631 REMARK 3 S TENSOR REMARK 3 S11: 0.0729 S12: -0.1129 S13: -0.0377 REMARK 3 S21: 0.0452 S22: -0.0097 S23: -0.0079 REMARK 3 S31: -0.1244 S32: -0.0541 S33: -0.0632 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: {A|663 - 712} REMARK 3 ORIGIN FOR THE GROUP (A): -0.1671 -30.4382 -12.3537 REMARK 3 T TENSOR REMARK 3 T11: -0.1511 T22: -0.0262 REMARK 3 T33: 0.1969 T12: -0.0621 REMARK 3 T13: -0.0936 T23: 0.0455 REMARK 3 L TENSOR REMARK 3 L11: 0.4823 L22: 1.0425 REMARK 3 L33: 1.3982 L12: -1.4808 REMARK 3 L13: -2.6897 L23: -1.0712 REMARK 3 S TENSOR REMARK 3 S11: 0.0401 S12: -0.3921 S13: -0.2106 REMARK 3 S21: 0.0996 S22: 0.0454 S23: -0.0843 REMARK 3 S31: 0.0799 S32: 0.2224 S33: -0.0854 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: {A|713 - 781} REMARK 3 ORIGIN FOR THE GROUP (A): -15.6511 -31.8058 -7.9045 REMARK 3 T TENSOR REMARK 3 T11: -0.1310 T22: -0.0625 REMARK 3 T33: 0.0780 T12: -0.1206 REMARK 3 T13: 0.0424 T23: 0.0578 REMARK 3 L TENSOR REMARK 3 L11: 3.6836 L22: 1.1503 REMARK 3 L33: 3.6069 L12: -0.6945 REMARK 3 L13: -0.5446 L23: 0.6841 REMARK 3 S TENSOR REMARK 3 S11: -0.0513 S12: -0.5442 S13: -0.5442 REMARK 3 S21: 0.5424 S22: -0.1568 S23: 0.1527 REMARK 3 S31: 0.4794 S32: -0.4935 S33: 0.2081 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: {A|782 - 794} REMARK 3 ORIGIN FOR THE GROUP (A): -22.3453 -28.7183 -23.7106 REMARK 3 T TENSOR REMARK 3 T11: -0.2275 T22: -0.0829 REMARK 3 T33: 0.2735 T12: -0.0471 REMARK 3 T13: 0.0192 T23: -0.1520 REMARK 3 L TENSOR REMARK 3 L11: 0.2078 L22: 0.6729 REMARK 3 L33: 0.2972 L12: 1.9030 REMARK 3 L13: 0.9891 L23: 2.6455 REMARK 3 S TENSOR REMARK 3 S11: -0.0171 S12: -0.0374 S13: -0.0690 REMARK 3 S21: -0.0038 S22: -0.0802 S23: 0.0408 REMARK 3 S31: -0.1624 S32: -0.1400 S33: 0.0973 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5AP7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1290065031. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9173 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17195 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 41.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 1.46000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4C4J REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS, PH 8.0, 0.2M MGCL2, 20% (W/ REMARK 280 V) PEG6000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.36000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.98500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 58.08000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.36000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.98500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.08000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.36000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.98500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.08000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.36000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 55.98500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 58.08000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, CYS 604 TO TRP REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 496 REMARK 465 HIS A 497 REMARK 465 HIS A 498 REMARK 465 HIS A 499 REMARK 465 HIS A 500 REMARK 465 HIS A 501 REMARK 465 HIS A 502 REMARK 465 SER A 503 REMARK 465 SER A 504 REMARK 465 GLY A 505 REMARK 465 VAL A 506 REMARK 465 ASP A 507 REMARK 465 LEU A 508 REMARK 465 ASP A 674 REMARK 465 THR A 675 REMARK 465 THR A 676 REMARK 465 SER A 677 REMARK 465 VAL A 678 REMARK 465 VAL A 679 REMARK 465 LYS A 680 REMARK 465 ASP A 681 REMARK 465 SER A 682 REMARK 465 GLN A 683 REMARK 465 MET A 698 REMARK 465 SER A 699 REMARK 465 SER A 700 REMARK 465 SER A 701 REMARK 465 ARG A 702 REMARK 465 GLU A 703 REMARK 465 ASN A 704 REMARK 465 GLY A 705 REMARK 465 LYS A 706 REMARK 465 SER A 707 REMARK 465 LYS A 708 REMARK 465 SER A 709 REMARK 465 LYS A 710 REMARK 465 THR A 795 REMARK 465 HIS A 796 REMARK 465 PRO A 797 REMARK 465 VAL A 798 REMARK 465 ASN A 799 REMARK 465 GLN A 800 REMARK 465 MET A 801 REMARK 465 ALA A 802 REMARK 465 LYS A 803 REMARK 465 GLY A 804 REMARK 465 THR A 805 REMARK 465 THR A 806 REMARK 465 GLU A 807 REMARK 465 GLU A 808 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 510 OG1 CG2 REMARK 470 GLU A 511 CG CD OE1 OE2 REMARK 470 ASN A 512 CG OD1 ND2 REMARK 470 PHE A 515 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 516 CG CD OE1 NE2 REMARK 470 ARG A 523 CD NE CZ NH1 NH2 REMARK 470 LYS A 538 CE NZ REMARK 470 LYS A 546 CG CD CE NZ REMARK 470 GLU A 559 CG CD OE1 OE2 REMARK 470 LYS A 615 CE NZ REMARK 470 LYS A 616 CD CE NZ REMARK 470 LYS A 617 CG CD CE NZ REMARK 470 SER A 618 OG REMARK 470 TRP A 622 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 622 CZ3 CH2 REMARK 470 GLN A 670 CG CD OE1 NE2 REMARK 470 MET A 671 CG SD CE REMARK 470 GLN A 672 CG CD OE1 NE2 REMARK 470 VAL A 684 CG1 CG2 REMARK 470 LYS A 696 CD CE NZ REMARK 470 ASP A 697 CG OD1 OD2 REMARK 470 ILE A 711 CG1 CG2 CD1 REMARK 470 ILE A 738 CG1 CG2 CD1 REMARK 470 GLU A 753 CG CD OE1 OE2 REMARK 470 GLU A 755 CG CD OE1 OE2 REMARK 470 LYS A 777 CG CD CE NZ REMARK 470 GLN A 778 CG CD OE1 NE2 REMARK 470 GLN A 794 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 515 4.17 59.49 REMARK 500 ASP A 647 42.32 -151.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SVE A 1795 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1796 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1797 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1798 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1799 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5AP0 RELATED DB: PDB REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO REMARK 900 KINASE INHIBITOR DRUG RESISTANCE. REMARK 900 RELATED ID: 5AP1 RELATED DB: PDB REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO REMARK 900 KINASE INHIBITOR DRUG RESISTANCE. REMARK 900 RELATED ID: 5AP2 RELATED DB: PDB REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO REMARK 900 KINASE INHIBITOR DRUG RESISTANCE. REMARK 900 RELATED ID: 5AP3 RELATED DB: PDB REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO REMARK 900 KINASE INHIBITOR DRUG RESISTANCE. REMARK 900 RELATED ID: 5AP4 RELATED DB: PDB REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO REMARK 900 KINASE INHIBITOR DRUG RESISTANCE. REMARK 900 RELATED ID: 5AP5 RELATED DB: PDB REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO REMARK 900 KINASE INHIBITOR DRUG RESISTANCE. REMARK 900 RELATED ID: 5AP6 RELATED DB: PDB REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO REMARK 900 KINASE INHIBITOR DRUG RESISTANCE. REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE INCLUDING HEXAHISTIDINE TAG IS AS DESCRIBED REMARK 999 IN NAT. CHEM. BIOL. 2010, 6, 259-368 WITH AN ADDITIONAL REMARK 999 MUTATION C604W DBREF 5AP7 A 519 808 UNP P33981 TTK_HUMAN 519 808 SEQADV 5AP7 MET A 496 UNP P33981 EXPRESSION TAG SEQADV 5AP7 HIS A 497 UNP P33981 EXPRESSION TAG SEQADV 5AP7 HIS A 498 UNP P33981 EXPRESSION TAG SEQADV 5AP7 HIS A 499 UNP P33981 EXPRESSION TAG SEQADV 5AP7 HIS A 500 UNP P33981 EXPRESSION TAG SEQADV 5AP7 HIS A 501 UNP P33981 EXPRESSION TAG SEQADV 5AP7 HIS A 502 UNP P33981 EXPRESSION TAG SEQADV 5AP7 SER A 503 UNP P33981 EXPRESSION TAG SEQADV 5AP7 SER A 504 UNP P33981 EXPRESSION TAG SEQADV 5AP7 GLY A 505 UNP P33981 EXPRESSION TAG SEQADV 5AP7 VAL A 506 UNP P33981 EXPRESSION TAG SEQADV 5AP7 ASP A 507 UNP P33981 EXPRESSION TAG SEQADV 5AP7 LEU A 508 UNP P33981 EXPRESSION TAG SEQADV 5AP7 GLY A 509 UNP P33981 EXPRESSION TAG SEQADV 5AP7 THR A 510 UNP P33981 EXPRESSION TAG SEQADV 5AP7 GLU A 511 UNP P33981 EXPRESSION TAG SEQADV 5AP7 ASN A 512 UNP P33981 EXPRESSION TAG SEQADV 5AP7 LEU A 513 UNP P33981 EXPRESSION TAG SEQADV 5AP7 TYR A 514 UNP P33981 EXPRESSION TAG SEQADV 5AP7 PHE A 515 UNP P33981 EXPRESSION TAG SEQADV 5AP7 GLN A 516 UNP P33981 EXPRESSION TAG SEQADV 5AP7 SER A 517 UNP P33981 EXPRESSION TAG SEQADV 5AP7 MET A 518 UNP P33981 EXPRESSION TAG SEQADV 5AP7 TRP A 604 UNP P33981 CYS 604 ENGINEERED MUTATION SEQRES 1 A 313 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 313 GLY THR GLU ASN LEU TYR PHE GLN SER MET SER VAL LYS SEQRES 3 A 313 GLY ARG ILE TYR SER ILE LEU LYS GLN ILE GLY SER GLY SEQRES 4 A 313 GLY SER SER LYS VAL PHE GLN VAL LEU ASN GLU LYS LYS SEQRES 5 A 313 GLN ILE TYR ALA ILE LYS TYR VAL ASN LEU GLU GLU ALA SEQRES 6 A 313 ASP ASN GLN THR LEU ASP SER TYR ARG ASN GLU ILE ALA SEQRES 7 A 313 TYR LEU ASN LYS LEU GLN GLN HIS SER ASP LYS ILE ILE SEQRES 8 A 313 ARG LEU TYR ASP TYR GLU ILE THR ASP GLN TYR ILE TYR SEQRES 9 A 313 MET VAL MET GLU TRP GLY ASN ILE ASP LEU ASN SER TRP SEQRES 10 A 313 LEU LYS LYS LYS LYS SER ILE ASP PRO TRP GLU ARG LYS SEQRES 11 A 313 SER TYR TRP LYS ASN MET LEU GLU ALA VAL HIS THR ILE SEQRES 12 A 313 HIS GLN HIS GLY ILE VAL HIS SER ASP LEU LYS PRO ALA SEQRES 13 A 313 ASN PHE LEU ILE VAL ASP GLY MET LEU LYS LEU ILE ASP SEQRES 14 A 313 PHE GLY ILE ALA ASN GLN MET GLN PRO ASP THR THR SER SEQRES 15 A 313 VAL VAL LYS ASP SER GLN VAL GLY THR VAL ASN TYR MET SEQRES 16 A 313 PRO PRO GLU ALA ILE LYS ASP MET SER SER SER ARG GLU SEQRES 17 A 313 ASN GLY LYS SER LYS SER LYS ILE SER PRO LYS SER ASP SEQRES 18 A 313 VAL TRP SER LEU GLY CYS ILE LEU TYR TYR MET THR TYR SEQRES 19 A 313 GLY LYS THR PRO PHE GLN GLN ILE ILE ASN GLN ILE SER SEQRES 20 A 313 LYS LEU HIS ALA ILE ILE ASP PRO ASN HIS GLU ILE GLU SEQRES 21 A 313 PHE PRO ASP ILE PRO GLU LYS ASP LEU GLN ASP VAL LEU SEQRES 22 A 313 LYS CYS CYS LEU LYS ARG ASP PRO LYS GLN ARG ILE SER SEQRES 23 A 313 ILE PRO GLU LEU LEU ALA HIS PRO TYR VAL GLN ILE GLN SEQRES 24 A 313 THR HIS PRO VAL ASN GLN MET ALA LYS GLY THR THR GLU SEQRES 25 A 313 GLU HET SVE A1795 49 HET EDO A1796 4 HET EDO A1797 4 HET EDO A1798 4 HET EDO A1799 4 HET EDO A1800 4 HET DMS A1801 4 HETNAM SVE N-(2,6-DIETHYLPHENYL)-1-METHYL-8-({4-[(1- HETNAM 2 SVE METHYLPIPERIDIN-4-YL)CARBAMOYL]-2-(TRIFLUOROMETHOXY) HETNAM 3 SVE PHENYL}AMINO)-4,5-DIHYDRO-1H-PYRAZOLO[4,3- HETNAM 4 SVE H]QUINAZOLINE-3-CARBOXAMIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM DMS DIMETHYL SULFOXIDE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 SVE C35 H39 F3 N8 O3 FORMUL 3 EDO 5(C2 H6 O2) FORMUL 8 DMS C2 H6 O S FORMUL 9 HOH *41(H2 O) HELIX 1 1 ASP A 561 GLN A 579 1 19 HELIX 2 2 GLN A 580 SER A 582 5 3 HELIX 3 3 LEU A 609 LYS A 616 1 8 HELIX 4 4 ASP A 620 GLN A 640 1 21 HELIX 5 5 LYS A 649 ALA A 651 5 3 HELIX 6 6 PRO A 691 ASP A 697 1 7 HELIX 7 7 SER A 712 GLY A 730 1 19 HELIX 8 8 ASN A 739 ASP A 749 1 11 HELIX 9 9 GLU A 761 LEU A 772 1 12 HELIX 10 10 SER A 781 LEU A 786 1 6 HELIX 11 11 HIS A 788 ILE A 793 1 6 SHEET 1 AA 6 SER A 517 VAL A 520 0 SHEET 2 AA 6 ARG A 523 GLY A 534 -1 O ARG A 523 N VAL A 520 SHEET 3 AA 6 SER A 537 ASN A 544 -1 O SER A 537 N GLY A 534 SHEET 4 AA 6 ILE A 549 ASN A 556 -1 O TYR A 550 N VAL A 542 SHEET 5 AA 6 TYR A 597 MET A 602 -1 O ILE A 598 N VAL A 555 SHEET 6 AA 6 LEU A 588 ILE A 593 -1 N TYR A 589 O VAL A 601 SHEET 1 AB 3 ILE A 607 ASP A 608 0 SHEET 2 AB 3 PHE A 653 VAL A 656 -1 N ILE A 655 O ILE A 607 SHEET 3 AB 3 MET A 659 LEU A 662 -1 O MET A 659 N VAL A 656 SITE 1 AC1 18 GLY A 509 ILE A 531 SER A 537 VAL A 539 SITE 2 AC1 18 GLN A 541 ALA A 551 LYS A 553 ILE A 586 SITE 3 AC1 18 MET A 602 GLU A 603 TRP A 604 GLY A 605 SITE 4 AC1 18 ASN A 606 ASP A 608 SER A 611 ALA A 651 SITE 5 AC1 18 LEU A 654 ILE A 663 SITE 1 AC2 3 LYS A 553 GLU A 571 ILE A 663 SITE 1 AC3 3 ASP A 566 LEU A 786 GLN A 792 SITE 1 AC4 5 ASP A 595 HIS A 636 HIS A 639 ILE A 782 SITE 2 AC4 5 HOH A2040 SITE 1 AC5 5 PRO A 760 GLU A 761 LYS A 762 ASP A 763 SITE 2 AC5 5 HOH A2037 SITE 1 AC6 4 LYS A 521 ASP A 590 TYR A 591 GLU A 784 SITE 1 AC7 3 TYR A 525 ASN A 544 TYR A 550 CRYST1 70.720 111.970 116.160 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014140 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008931 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008609 0.00000