HEADER APOPTOSIS 22-DEC-15 5B1Z TITLE CRYSTAL STRUCTURE OF BCL-XL IN COMPLEX WITH HBX-BH3 MOTIF COMPND MOL_ID: 1; COMPND 2 MOLECULE: BCL-2-LIKE PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-209, WITH DELETION OF RESIDUES 27-82; COMPND 5 SYNONYM: BCL2-L-1,APOPTOSIS REGULATOR BCL-X; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEPTIDE FROM PROTEIN X; COMPND 9 CHAIN: C, D; COMPND 10 SYNONYM: HBX,PEPTIDE X,PX; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL2L1, BCL2L, BCLX; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HEPATITIS B VIRUS; SOURCE 12 ORGANISM_COMMON: HBV; SOURCE 13 ORGANISM_TAXID: 10407; SOURCE 14 EXPRESSION_SYSTEM: PEPTIDE DISPLAY VECTOR FTH1; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 160651 KEYWDS HBX, BCL-XL, HBV REPLICATION, APOPTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR Y.A.YUAN REVDAT 3 20-MAR-24 5B1Z 1 REMARK REVDAT 2 04-OCT-17 5B1Z 1 REMARK REVDAT 1 28-DEC-16 5B1Z 0 JRNL AUTH Y.A.YUAN JRNL TITL CRYSTAL STRUCTURE OF BCL-XL IN COMPLEX WITH HBX-BH3 MOTIF JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 17371 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 944 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1108 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE SET COUNT : 51 REMARK 3 BIN FREE R VALUE : 0.3530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2614 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 151 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.85000 REMARK 3 B22 (A**2) : 1.62000 REMARK 3 B33 (A**2) : -0.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.299 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.241 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.183 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.974 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.880 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2674 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2464 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3614 ; 1.651 ; 1.922 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5632 ; 0.891 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 318 ; 6.142 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 144 ;38.508 ;24.167 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 446 ;16.670 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;18.064 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 378 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3076 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 686 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1284 ; 0.828 ; 0.984 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1283 ; 0.828 ; 0.984 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1598 ; 1.389 ; 1.465 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1599 ; 1.388 ; 1.465 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1388 ; 1.133 ; 1.074 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1389 ; 1.133 ; 1.074 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2016 ; 1.781 ; 1.572 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3288 ; 4.315 ; 8.030 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3259 ; 4.284 ; 7.858 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 144 REMARK 3 ORIGIN FOR THE GROUP (A): 9.9068 36.1836 36.6047 REMARK 3 T TENSOR REMARK 3 T11: 0.0736 T22: 0.0965 REMARK 3 T33: 0.0966 T12: 0.0015 REMARK 3 T13: 0.0006 T23: 0.0588 REMARK 3 L TENSOR REMARK 3 L11: 2.7782 L22: 3.8855 REMARK 3 L33: 2.0140 L12: -1.4906 REMARK 3 L13: 0.3077 L23: -1.3592 REMARK 3 S TENSOR REMARK 3 S11: 0.0754 S12: 0.1666 S13: -0.2016 REMARK 3 S21: -0.1302 S22: -0.3240 S23: -0.1927 REMARK 3 S31: 0.2130 S32: 0.3218 S33: 0.2486 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 144 REMARK 3 ORIGIN FOR THE GROUP (A): -6.4578 54.8763 38.1727 REMARK 3 T TENSOR REMARK 3 T11: 0.1033 T22: 0.0068 REMARK 3 T33: 0.0501 T12: -0.0057 REMARK 3 T13: -0.0003 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 2.3148 L22: 3.0408 REMARK 3 L33: 1.5154 L12: -1.0819 REMARK 3 L13: -0.3465 L23: 0.2379 REMARK 3 S TENSOR REMARK 3 S11: 0.0137 S12: -0.0524 S13: 0.0183 REMARK 3 S21: 0.0714 S22: -0.0537 S23: 0.0941 REMARK 3 S31: -0.2139 S32: -0.0435 S33: 0.0400 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 118 C 133 REMARK 3 ORIGIN FOR THE GROUP (A): 19.7989 32.7078 25.7068 REMARK 3 T TENSOR REMARK 3 T11: 0.4780 T22: 0.5050 REMARK 3 T33: 0.2805 T12: 0.1965 REMARK 3 T13: 0.1031 T23: 0.1126 REMARK 3 L TENSOR REMARK 3 L11: 4.9612 L22: 7.6856 REMARK 3 L33: 3.6753 L12: 2.8003 REMARK 3 L13: 1.7059 L23: 0.4929 REMARK 3 S TENSOR REMARK 3 S11: -0.2700 S12: 0.3462 S13: -0.3919 REMARK 3 S21: -0.9617 S22: 0.4316 S23: -0.0808 REMARK 3 S31: 0.8517 S32: 0.2414 S33: -0.1615 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 118 D 135 REMARK 3 ORIGIN FOR THE GROUP (A): -19.1849 56.8880 30.0040 REMARK 3 T TENSOR REMARK 3 T11: 0.3855 T22: 0.4173 REMARK 3 T33: 0.2444 T12: 0.1401 REMARK 3 T13: 0.0165 T23: -0.0789 REMARK 3 L TENSOR REMARK 3 L11: 3.5944 L22: 10.5642 REMARK 3 L33: 1.6959 L12: 4.7754 REMARK 3 L13: 1.0640 L23: 0.3966 REMARK 3 S TENSOR REMARK 3 S11: -0.2125 S12: 0.3361 S13: 0.2691 REMARK 3 S21: -0.7467 S22: 0.1934 S23: 0.8343 REMARK 3 S31: -0.3529 S32: -0.1520 S33: 0.0191 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5B1Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1300000384. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17371 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.05M SODIUM CITRATE, 0.1M CHES PH REMARK 280 9.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.79650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.79650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 25.35400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 67.65850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 25.35400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 67.65850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.79650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 25.35400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 67.65850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.79650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 25.35400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 67.65850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 256 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 274 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 145 REMARK 465 GLU A 146 REMARK 465 SER A 147 REMARK 465 ARG A 148 REMARK 465 LYS A 149 REMARK 465 GLY A 150 REMARK 465 GLN A 151 REMARK 465 GLU A 152 REMARK 465 ARG A 153 REMARK 465 ALA B 145 REMARK 465 GLU B 146 REMARK 465 SER B 147 REMARK 465 ARG B 148 REMARK 465 LYS B 149 REMARK 465 GLY B 150 REMARK 465 GLN B 151 REMARK 465 GLU B 152 REMARK 465 ARG B 153 REMARK 465 LYS C 113 REMARK 465 ASP C 114 REMARK 465 CYS C 115 REMARK 465 VAL C 116 REMARK 465 PHE C 117 REMARK 465 LEU C 134 REMARK 465 GLY C 135 REMARK 465 LYS D 113 REMARK 465 ASP D 114 REMARK 465 CYS D 115 REMARK 465 VAL D 116 REMARK 465 PHE D 117 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN B 104 O HOH B 201 1.94 REMARK 500 O HOH B 259 O HOH B 268 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 80 CB - CA - C ANGL. DEV. = -13.0 DEGREES REMARK 500 ARG B 44 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 3 -39.43 -38.99 REMARK 500 ALA B 143 161.87 -46.42 REMARK 500 REMARK 500 REMARK: NULL DBREF 5B1Z A 1 153 UNP Q07817 B2CL1_HUMAN 1 209 DBREF 5B1Z B 1 153 UNP Q07817 B2CL1_HUMAN 1 209 DBREF 5B1Z C 113 135 UNP I3XMW8 I3XMW8_HBV 113 135 DBREF 5B1Z D 113 135 UNP I3XMW8 I3XMW8_HBV 113 135 SEQADV 5B1Z A UNP Q07817 PHE 27 DELETION SEQADV 5B1Z A UNP Q07817 SER 28 DELETION SEQADV 5B1Z A UNP Q07817 ASP 29 DELETION SEQADV 5B1Z A UNP Q07817 VAL 30 DELETION SEQADV 5B1Z A UNP Q07817 GLU 31 DELETION SEQADV 5B1Z A UNP Q07817 GLU 32 DELETION SEQADV 5B1Z A UNP Q07817 ASN 33 DELETION SEQADV 5B1Z A UNP Q07817 ARG 34 DELETION SEQADV 5B1Z A UNP Q07817 THR 35 DELETION SEQADV 5B1Z A UNP Q07817 GLU 36 DELETION SEQADV 5B1Z A UNP Q07817 ALA 37 DELETION SEQADV 5B1Z A UNP Q07817 PRO 38 DELETION SEQADV 5B1Z A UNP Q07817 GLU 39 DELETION SEQADV 5B1Z A UNP Q07817 GLY 40 DELETION SEQADV 5B1Z A UNP Q07817 THR 41 DELETION SEQADV 5B1Z A UNP Q07817 GLU 42 DELETION SEQADV 5B1Z A UNP Q07817 SER 43 DELETION SEQADV 5B1Z A UNP Q07817 GLU 44 DELETION SEQADV 5B1Z A UNP Q07817 MET 45 DELETION SEQADV 5B1Z A UNP Q07817 GLU 46 DELETION SEQADV 5B1Z A UNP Q07817 THR 47 DELETION SEQADV 5B1Z A UNP Q07817 PRO 48 DELETION SEQADV 5B1Z A UNP Q07817 SER 49 DELETION SEQADV 5B1Z A UNP Q07817 ALA 50 DELETION SEQADV 5B1Z A UNP Q07817 ILE 51 DELETION SEQADV 5B1Z A UNP Q07817 ASN 52 DELETION SEQADV 5B1Z A UNP Q07817 GLY 53 DELETION SEQADV 5B1Z A UNP Q07817 ASN 54 DELETION SEQADV 5B1Z A UNP Q07817 PRO 55 DELETION SEQADV 5B1Z A UNP Q07817 SER 56 DELETION SEQADV 5B1Z A UNP Q07817 TRP 57 DELETION SEQADV 5B1Z A UNP Q07817 HIS 58 DELETION SEQADV 5B1Z A UNP Q07817 LEU 59 DELETION SEQADV 5B1Z A UNP Q07817 ALA 60 DELETION SEQADV 5B1Z A UNP Q07817 ASP 61 DELETION SEQADV 5B1Z A UNP Q07817 SER 62 DELETION SEQADV 5B1Z A UNP Q07817 PRO 63 DELETION SEQADV 5B1Z A UNP Q07817 ALA 64 DELETION SEQADV 5B1Z A UNP Q07817 VAL 65 DELETION SEQADV 5B1Z A UNP Q07817 ASN 66 DELETION SEQADV 5B1Z A UNP Q07817 GLY 67 DELETION SEQADV 5B1Z A UNP Q07817 ALA 68 DELETION SEQADV 5B1Z A UNP Q07817 THR 69 DELETION SEQADV 5B1Z A UNP Q07817 GLY 70 DELETION SEQADV 5B1Z A UNP Q07817 HIS 71 DELETION SEQADV 5B1Z A UNP Q07817 SER 72 DELETION SEQADV 5B1Z A UNP Q07817 SER 73 DELETION SEQADV 5B1Z A UNP Q07817 SER 74 DELETION SEQADV 5B1Z A UNP Q07817 LEU 75 DELETION SEQADV 5B1Z A UNP Q07817 ASP 76 DELETION SEQADV 5B1Z A UNP Q07817 ALA 77 DELETION SEQADV 5B1Z A UNP Q07817 ARG 78 DELETION SEQADV 5B1Z A UNP Q07817 GLU 79 DELETION SEQADV 5B1Z A UNP Q07817 VAL 80 DELETION SEQADV 5B1Z A UNP Q07817 ILE 81 DELETION SEQADV 5B1Z A UNP Q07817 PRO 82 DELETION SEQADV 5B1Z B UNP Q07817 PHE 27 DELETION SEQADV 5B1Z B UNP Q07817 SER 28 DELETION SEQADV 5B1Z B UNP Q07817 ASP 29 DELETION SEQADV 5B1Z B UNP Q07817 VAL 30 DELETION SEQADV 5B1Z B UNP Q07817 GLU 31 DELETION SEQADV 5B1Z B UNP Q07817 GLU 32 DELETION SEQADV 5B1Z B UNP Q07817 ASN 33 DELETION SEQADV 5B1Z B UNP Q07817 ARG 34 DELETION SEQADV 5B1Z B UNP Q07817 THR 35 DELETION SEQADV 5B1Z B UNP Q07817 GLU 36 DELETION SEQADV 5B1Z B UNP Q07817 ALA 37 DELETION SEQADV 5B1Z B UNP Q07817 PRO 38 DELETION SEQADV 5B1Z B UNP Q07817 GLU 39 DELETION SEQADV 5B1Z B UNP Q07817 GLY 40 DELETION SEQADV 5B1Z B UNP Q07817 THR 41 DELETION SEQADV 5B1Z B UNP Q07817 GLU 42 DELETION SEQADV 5B1Z B UNP Q07817 SER 43 DELETION SEQADV 5B1Z B UNP Q07817 GLU 44 DELETION SEQADV 5B1Z B UNP Q07817 MET 45 DELETION SEQADV 5B1Z B UNP Q07817 GLU 46 DELETION SEQADV 5B1Z B UNP Q07817 THR 47 DELETION SEQADV 5B1Z B UNP Q07817 PRO 48 DELETION SEQADV 5B1Z B UNP Q07817 SER 49 DELETION SEQADV 5B1Z B UNP Q07817 ALA 50 DELETION SEQADV 5B1Z B UNP Q07817 ILE 51 DELETION SEQADV 5B1Z B UNP Q07817 ASN 52 DELETION SEQADV 5B1Z B UNP Q07817 GLY 53 DELETION SEQADV 5B1Z B UNP Q07817 ASN 54 DELETION SEQADV 5B1Z B UNP Q07817 PRO 55 DELETION SEQADV 5B1Z B UNP Q07817 SER 56 DELETION SEQADV 5B1Z B UNP Q07817 TRP 57 DELETION SEQADV 5B1Z B UNP Q07817 HIS 58 DELETION SEQADV 5B1Z B UNP Q07817 LEU 59 DELETION SEQADV 5B1Z B UNP Q07817 ALA 60 DELETION SEQADV 5B1Z B UNP Q07817 ASP 61 DELETION SEQADV 5B1Z B UNP Q07817 SER 62 DELETION SEQADV 5B1Z B UNP Q07817 PRO 63 DELETION SEQADV 5B1Z B UNP Q07817 ALA 64 DELETION SEQADV 5B1Z B UNP Q07817 VAL 65 DELETION SEQADV 5B1Z B UNP Q07817 ASN 66 DELETION SEQADV 5B1Z B UNP Q07817 GLY 67 DELETION SEQADV 5B1Z B UNP Q07817 ALA 68 DELETION SEQADV 5B1Z B UNP Q07817 THR 69 DELETION SEQADV 5B1Z B UNP Q07817 GLY 70 DELETION SEQADV 5B1Z B UNP Q07817 HIS 71 DELETION SEQADV 5B1Z B UNP Q07817 SER 72 DELETION SEQADV 5B1Z B UNP Q07817 SER 73 DELETION SEQADV 5B1Z B UNP Q07817 SER 74 DELETION SEQADV 5B1Z B UNP Q07817 LEU 75 DELETION SEQADV 5B1Z B UNP Q07817 ASP 76 DELETION SEQADV 5B1Z B UNP Q07817 ALA 77 DELETION SEQADV 5B1Z B UNP Q07817 ARG 78 DELETION SEQADV 5B1Z B UNP Q07817 GLU 79 DELETION SEQADV 5B1Z B UNP Q07817 VAL 80 DELETION SEQADV 5B1Z B UNP Q07817 ILE 81 DELETION SEQADV 5B1Z B UNP Q07817 PRO 82 DELETION SEQRES 1 A 153 MET SER GLN SER ASN ARG GLU LEU VAL VAL ASP PHE LEU SEQRES 2 A 153 SER TYR LYS LEU SER GLN LYS GLY TYR SER TRP SER GLN SEQRES 3 A 153 MET ALA ALA VAL LYS GLN ALA LEU ARG GLU ALA GLY ASP SEQRES 4 A 153 GLU PHE GLU LEU ARG TYR ARG ARG ALA PHE SER ASP LEU SEQRES 5 A 153 THR SER GLN LEU HIS ILE THR PRO GLY THR ALA TYR GLN SEQRES 6 A 153 SER PHE GLU GLN VAL VAL ASN GLU LEU PHE ARG ASP GLY SEQRES 7 A 153 VAL ASN TRP GLY ARG ILE VAL ALA PHE PHE SER PHE GLY SEQRES 8 A 153 GLY ALA LEU CYS VAL GLU SER VAL ASP LYS GLU MET GLN SEQRES 9 A 153 VAL LEU VAL SER ARG ILE ALA ALA TRP MET ALA THR TYR SEQRES 10 A 153 LEU ASN ASP HIS LEU GLU PRO TRP ILE GLN GLU ASN GLY SEQRES 11 A 153 GLY TRP ASP THR PHE VAL GLU LEU TYR GLY ASN ASN ALA SEQRES 12 A 153 ALA ALA GLU SER ARG LYS GLY GLN GLU ARG SEQRES 1 B 153 MET SER GLN SER ASN ARG GLU LEU VAL VAL ASP PHE LEU SEQRES 2 B 153 SER TYR LYS LEU SER GLN LYS GLY TYR SER TRP SER GLN SEQRES 3 B 153 MET ALA ALA VAL LYS GLN ALA LEU ARG GLU ALA GLY ASP SEQRES 4 B 153 GLU PHE GLU LEU ARG TYR ARG ARG ALA PHE SER ASP LEU SEQRES 5 B 153 THR SER GLN LEU HIS ILE THR PRO GLY THR ALA TYR GLN SEQRES 6 B 153 SER PHE GLU GLN VAL VAL ASN GLU LEU PHE ARG ASP GLY SEQRES 7 B 153 VAL ASN TRP GLY ARG ILE VAL ALA PHE PHE SER PHE GLY SEQRES 8 B 153 GLY ALA LEU CYS VAL GLU SER VAL ASP LYS GLU MET GLN SEQRES 9 B 153 VAL LEU VAL SER ARG ILE ALA ALA TRP MET ALA THR TYR SEQRES 10 B 153 LEU ASN ASP HIS LEU GLU PRO TRP ILE GLN GLU ASN GLY SEQRES 11 B 153 GLY TRP ASP THR PHE VAL GLU LEU TYR GLY ASN ASN ALA SEQRES 12 B 153 ALA ALA GLU SER ARG LYS GLY GLN GLU ARG SEQRES 1 C 23 LYS ASP CYS VAL PHE LYS ASP TRP GLU GLU LEU GLY GLU SEQRES 2 C 23 GLU ILE ARG LEU LYS VAL PHE VAL LEU GLY SEQRES 1 D 23 LYS ASP CYS VAL PHE LYS ASP TRP GLU GLU LEU GLY GLU SEQRES 2 D 23 GLU ILE ARG LEU LYS VAL PHE VAL LEU GLY FORMUL 5 HOH *151(H2 O) HELIX 1 AA1 SER A 2 GLN A 19 1 18 HELIX 2 AA2 SER A 25 TYR A 45 1 21 HELIX 3 AA3 TYR A 45 LEU A 56 1 12 HELIX 4 AA4 THR A 62 PHE A 75 1 14 HELIX 5 AA5 ASN A 80 LYS A 101 1 22 HELIX 6 AA6 GLN A 104 LEU A 122 1 19 HELIX 7 AA7 LEU A 122 ASN A 129 1 8 HELIX 8 AA8 GLY A 130 GLY A 140 1 11 HELIX 9 AA9 SER B 2 LYS B 20 1 19 HELIX 10 AB1 SER B 25 TYR B 45 1 21 HELIX 11 AB2 TYR B 45 GLN B 55 1 11 HELIX 12 AB3 THR B 62 PHE B 75 1 14 HELIX 13 AB4 ASN B 80 LYS B 101 1 22 HELIX 14 AB5 VAL B 105 LEU B 122 1 18 HELIX 15 AB6 LEU B 122 ASN B 129 1 8 HELIX 16 AB7 GLY B 130 GLY B 140 1 11 HELIX 17 AB8 ASP C 119 ILE C 127 1 9 HELIX 18 AB9 ASP D 119 ILE D 127 1 9 CRYST1 50.708 135.317 97.593 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019721 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007390 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010247 0.00000