data_5B5K # _entry.id 5B5K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5B5K pdb_00005b5k 10.2210/pdb5b5k/pdb WWPDB D_1300000570 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 5EJN _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5B5K _pdbx_database_status.recvd_initial_deposition_date 2016-05-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nishimura, K.' 1 'Han, L.' 2 'De Sanctis, D.' 3 'Jovine, L.' 4 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary Curr.Biol. CUBLE2 2060 0960-9822 ? ? 26 ? R661 R662 'The structure of sperm Izumo1 reveals unexpected similarities with Plasmodium invasion proteins.' 2016 ? 10.1016/j.cub.2016.06.028 27374339 ? ? ? ? ? ? ? ? UK ? ? 1 'Curr. Biol.' CUBLE2 2060 1879-0445 ? ? 26 ? R100 1 'Divergent evolution of vitamin B9 binding underlies Juno-mediated adhesion of mammalian gametes.' 2016 ? 10.1016/j.cub.2015.12.034 26859261 ? ? ? ? ? ? ? ? UK ? ? 2 Nature NATUAS 0006 1476-4687 ? ? 508 ? 483 487 'Juno is the egg Izumo receptor and is essential for mammalian fertilization.' 2014 ? 10.1038/nature13203 24739963 ? ? ? ? ? ? ? ? UK ? ? 3 Nature NATUAS 0006 1476-4687 ? ? 434 ? 234 238 'The immunoglobulin superfamily protein Izumo is required for sperm to fuse with eggs.' 2005 ? 10.1038/nature03362 15759005 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nishimura, K.' 1 ? primary 'Han, L.' 2 ? primary 'Bianchi, E.' 3 ? primary 'Wright, G.J.' 4 ? primary 'de Sanctis, D.' 5 ? primary 'Jovine, L.' 6 ? 1 'Han, L.' 7 ? 1 'Nishimura, K.' 8 ? 1 'Sadat Al Hosseini, H.' 9 ? 1 'Bianchi, E.' 10 ? 1 'Wright, G.J.' 11 ? 1 'Jovine, L.' 12 ? 2 'Bianchi, E.' 13 ? 2 'Doe, B.' 14 ? 2 'Goulding, D.' 15 ? 2 'Wright, G.J.' 16 ? 3 'Inoue, N.' 17 ? 3 'Ikawa, M.' 18 ? 3 'Isotani, A.' 19 ? 3 'Okabe, M.' 20 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5B5K _cell.details ? _cell.formula_units_Z ? _cell.length_a 103.280 _cell.length_a_esd ? _cell.length_b 103.280 _cell.length_b_esd ? _cell.length_c 139.270 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5B5K _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Izumo sperm-egg fusion protein 1' 27332.318 1 ? ? 'UNP RESIDUES 22-257' ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 3 non-polymer man '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 4 water nat water 18.015 28 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Oocyte binding/fusion factor,OBF,Sperm-specific protein izumo' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;CIKCDQFVTDALKTFENTYLNDHLPHDIHKNVMRMVNHEVSSFGVVTSAEDSYLGAVDENTLEQATWSFLKDLKRITDSD LKGELFIKELLWMLRHQKDIFNNLARQFQKEVLCPNKCGVMSQTLIWCLKCEKQLHICRKSLDCGERHIEVHRSEDLVLD CLLSWHRASKGLTDYSFYRVWENSSETLIAKGKEPYLTKSMVGPEDAGNYRCVLDTINQGHATVIRYDVTVLPPKH ; _entity_poly.pdbx_seq_one_letter_code_can ;CIKCDQFVTDALKTFENTYLNDHLPHDIHKNVMRMVNHEVSSFGVVTSAEDSYLGAVDENTLEQATWSFLKDLKRITDSD LKGELFIKELLWMLRHQKDIFNNLARQFQKEVLCPNKCGVMSQTLIWCLKCEKQLHICRKSLDCGERHIEVHRSEDLVLD CLLSWHRASKGLTDYSFYRVWENSSETLIAKGKEPYLTKSMVGPEDAGNYRCVLDTINQGHATVIRYDVTVLPPKH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 ILE n 1 3 LYS n 1 4 CYS n 1 5 ASP n 1 6 GLN n 1 7 PHE n 1 8 VAL n 1 9 THR n 1 10 ASP n 1 11 ALA n 1 12 LEU n 1 13 LYS n 1 14 THR n 1 15 PHE n 1 16 GLU n 1 17 ASN n 1 18 THR n 1 19 TYR n 1 20 LEU n 1 21 ASN n 1 22 ASP n 1 23 HIS n 1 24 LEU n 1 25 PRO n 1 26 HIS n 1 27 ASP n 1 28 ILE n 1 29 HIS n 1 30 LYS n 1 31 ASN n 1 32 VAL n 1 33 MET n 1 34 ARG n 1 35 MET n 1 36 VAL n 1 37 ASN n 1 38 HIS n 1 39 GLU n 1 40 VAL n 1 41 SER n 1 42 SER n 1 43 PHE n 1 44 GLY n 1 45 VAL n 1 46 VAL n 1 47 THR n 1 48 SER n 1 49 ALA n 1 50 GLU n 1 51 ASP n 1 52 SER n 1 53 TYR n 1 54 LEU n 1 55 GLY n 1 56 ALA n 1 57 VAL n 1 58 ASP n 1 59 GLU n 1 60 ASN n 1 61 THR n 1 62 LEU n 1 63 GLU n 1 64 GLN n 1 65 ALA n 1 66 THR n 1 67 TRP n 1 68 SER n 1 69 PHE n 1 70 LEU n 1 71 LYS n 1 72 ASP n 1 73 LEU n 1 74 LYS n 1 75 ARG n 1 76 ILE n 1 77 THR n 1 78 ASP n 1 79 SER n 1 80 ASP n 1 81 LEU n 1 82 LYS n 1 83 GLY n 1 84 GLU n 1 85 LEU n 1 86 PHE n 1 87 ILE n 1 88 LYS n 1 89 GLU n 1 90 LEU n 1 91 LEU n 1 92 TRP n 1 93 MET n 1 94 LEU n 1 95 ARG n 1 96 HIS n 1 97 GLN n 1 98 LYS n 1 99 ASP n 1 100 ILE n 1 101 PHE n 1 102 ASN n 1 103 ASN n 1 104 LEU n 1 105 ALA n 1 106 ARG n 1 107 GLN n 1 108 PHE n 1 109 GLN n 1 110 LYS n 1 111 GLU n 1 112 VAL n 1 113 LEU n 1 114 CYS n 1 115 PRO n 1 116 ASN n 1 117 LYS n 1 118 CYS n 1 119 GLY n 1 120 VAL n 1 121 MET n 1 122 SER n 1 123 GLN n 1 124 THR n 1 125 LEU n 1 126 ILE n 1 127 TRP n 1 128 CYS n 1 129 LEU n 1 130 LYS n 1 131 CYS n 1 132 GLU n 1 133 LYS n 1 134 GLN n 1 135 LEU n 1 136 HIS n 1 137 ILE n 1 138 CYS n 1 139 ARG n 1 140 LYS n 1 141 SER n 1 142 LEU n 1 143 ASP n 1 144 CYS n 1 145 GLY n 1 146 GLU n 1 147 ARG n 1 148 HIS n 1 149 ILE n 1 150 GLU n 1 151 VAL n 1 152 HIS n 1 153 ARG n 1 154 SER n 1 155 GLU n 1 156 ASP n 1 157 LEU n 1 158 VAL n 1 159 LEU n 1 160 ASP n 1 161 CYS n 1 162 LEU n 1 163 LEU n 1 164 SER n 1 165 TRP n 1 166 HIS n 1 167 ARG n 1 168 ALA n 1 169 SER n 1 170 LYS n 1 171 GLY n 1 172 LEU n 1 173 THR n 1 174 ASP n 1 175 TYR n 1 176 SER n 1 177 PHE n 1 178 TYR n 1 179 ARG n 1 180 VAL n 1 181 TRP n 1 182 GLU n 1 183 ASN n 1 184 SER n 1 185 SER n 1 186 GLU n 1 187 THR n 1 188 LEU n 1 189 ILE n 1 190 ALA n 1 191 LYS n 1 192 GLY n 1 193 LYS n 1 194 GLU n 1 195 PRO n 1 196 TYR n 1 197 LEU n 1 198 THR n 1 199 LYS n 1 200 SER n 1 201 MET n 1 202 VAL n 1 203 GLY n 1 204 PRO n 1 205 GLU n 1 206 ASP n 1 207 ALA n 1 208 GLY n 1 209 ASN n 1 210 TYR n 1 211 ARG n 1 212 CYS n 1 213 VAL n 1 214 LEU n 1 215 ASP n 1 216 THR n 1 217 ILE n 1 218 ASN n 1 219 GLN n 1 220 GLY n 1 221 HIS n 1 222 ALA n 1 223 THR n 1 224 VAL n 1 225 ILE n 1 226 ARG n 1 227 TYR n 1 228 ASP n 1 229 VAL n 1 230 THR n 1 231 VAL n 1 232 LEU n 1 233 PRO n 1 234 PRO n 1 235 LYS n 1 236 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 236 _entity_src_gen.gene_src_common_name Mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Izumo1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK-293S _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHLsec _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code IZUM1_MOUSE _struct_ref.pdbx_db_accession Q9D9J7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;CIKCDQFVTDALKTFENTYLNDHLPHDIHKNVMRMVNHEVSSFGVVTSAEDSYLGAVDENTLEQATWSFLKDLKRITDSD LKGELFIKELLWMLRHQKDIFNNLARQFQKEVLCPNKCGVMSQTLIWCLKCEKQLHICRKSLDCGERHIEVHRSEDLVLD CLLSWHRASKGLTDYSFYRVWENSSETLIAKGKEPYLTKSMVGPEDAGNYRCVLDTINQGHATVIRYDVTVLPPKH ; _struct_ref.pdbx_align_begin 22 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5B5K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 236 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9D9J7 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 257 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 22 _struct_ref_seq.pdbx_auth_seq_align_end 257 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5B5K _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.47 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 64.6 _exptl_crystal.description 'Square plate' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Ammonium formate pH 6.6, 20% PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-05-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98400 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.98400 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 59.20 _reflns.entry_id 5B5K _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.500 _reflns.d_resolution_low 43.840 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13389 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.6 _reflns.pdbx_Rmerge_I_obs 0.1948 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.13 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.500 _reflns_shell.d_res_low 2.589 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.13 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.2296 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 10.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5B5K _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.500 _refine.ls_d_res_low 43.840 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13384 _refine.ls_number_reflns_R_free 670 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.90 _refine.ls_percent_reflns_R_free 5.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2577 _refine.ls_R_factor_R_free 0.2807 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2565 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5JK9 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 31.93 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.46 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1932 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 1960 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 43.840 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 1978 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.809 ? 2679 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 12.033 ? 1203 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.051 ? 299 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 335 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.5000 2.6930 . . 130 2473 100.00 . . . 0.4054 . 0.3711 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6930 2.9640 . . 133 2509 100.00 . . . 0.3286 . 0.3478 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9640 3.3927 . . 132 2509 100.00 . . . 0.3669 . 0.3138 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3927 4.2739 . . 133 2543 100.00 . . . 0.2801 . 0.2437 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.2739 43.8469 . . 142 2680 100.00 . . . 0.2220 . 0.2083 . . . . . . . . . . # _struct.entry_id 5B5K _struct.title 'Crystal structure of Izumo1, the mammalian sperm ligand for egg Juno' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5B5K _struct_keywords.text 'CELL ADHESION, FERTILIZATION, EGG RECEPTOR, GAMETE ADHESION, SPERM-EGG MEMBRANE FUSION' _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ILE A 2 ? CYS A 4 ? ILE A 23 CYS A 25 5 ? 3 HELX_P HELX_P2 AA2 GLN A 6 ? HIS A 23 ? GLN A 27 HIS A 44 1 ? 18 HELX_P HELX_P3 AA3 HIS A 26 ? SER A 41 ? HIS A 47 SER A 62 5 ? 16 HELX_P HELX_P4 AA4 ALA A 49 ? LEU A 54 ? ALA A 70 LEU A 75 5 ? 6 HELX_P HELX_P5 AA5 GLU A 59 ? ASP A 78 ? GLU A 80 ASP A 99 1 ? 20 HELX_P HELX_P6 AA6 GLY A 83 ? VAL A 112 ? GLY A 104 VAL A 133 1 ? 30 HELX_P HELX_P7 AA7 SER A 164 ? ARG A 167 ? SER A 185 ARG A 188 5 ? 4 HELX_P HELX_P8 AA8 PRO A 204 ? ASP A 206 ? PRO A 225 ASP A 227 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 1 SG ? ? ? 1_555 A CYS 128 SG ? ? A CYS 22 A CYS 149 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 131 SG ? ? A CYS 25 A CYS 152 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf3 disulf ? ? A CYS 114 SG ? ? ? 1_555 A CYS 138 SG ? ? A CYS 135 A CYS 159 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf4 disulf ? ? A CYS 118 SG ? ? ? 1_555 A CYS 144 SG ? ? A CYS 139 A CYS 165 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf5 disulf ? ? A CYS 161 SG ? ? ? 1_555 A CYS 212 SG ? ? A CYS 182 A CYS 233 1_555 ? ? ? ? ? ? ? 2.024 ? ? covale1 covale one ? A ASN 183 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 204 A NAG 301 1_555 ? ? ? ? ? ? ? 1.435 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 56 ? ASP A 58 ? ALA A 77 ASP A 79 AA1 2 VAL A 120 ? TRP A 127 ? VAL A 141 TRP A 148 AA1 3 GLU A 132 ? ARG A 139 ? GLU A 153 ARG A 160 AA2 1 ASP A 143 ? HIS A 152 ? ASP A 164 HIS A 173 AA2 2 HIS A 221 ? LEU A 232 ? HIS A 242 LEU A 253 AA2 3 GLY A 208 ? THR A 216 ? GLY A 229 THR A 237 AA2 4 LEU A 172 ? VAL A 180 ? LEU A 193 VAL A 201 AA2 5 GLU A 186 ? GLY A 192 ? GLU A 207 GLY A 213 AA3 1 LEU A 157 ? ASP A 160 ? LEU A 178 ASP A 181 AA3 2 TYR A 196 ? LYS A 199 ? TYR A 217 LYS A 220 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 57 ? N VAL A 78 O ILE A 126 ? O ILE A 147 AA1 2 3 N GLN A 123 ? N GLN A 144 O HIS A 136 ? O HIS A 157 AA2 1 2 N ARG A 147 ? N ARG A 168 O ASP A 228 ? O ASP A 249 AA2 2 3 O ILE A 225 ? O ILE A 246 N CYS A 212 ? N CYS A 233 AA2 3 4 O ASP A 215 ? O ASP A 236 N THR A 173 ? N THR A 194 AA2 4 5 N PHE A 177 ? N PHE A 198 O ILE A 189 ? O ILE A 210 AA3 1 2 N LEU A 157 ? N LEU A 178 O LYS A 199 ? O LYS A 220 # _atom_sites.entry_id 5B5K _atom_sites.fract_transf_matrix[1][1] 0.009682 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009682 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007180 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 22 22 CYS CYS A . n A 1 2 ILE 2 23 23 ILE ILE A . n A 1 3 LYS 3 24 24 LYS LYS A . n A 1 4 CYS 4 25 25 CYS CYS A . n A 1 5 ASP 5 26 26 ASP ASP A . n A 1 6 GLN 6 27 27 GLN GLN A . n A 1 7 PHE 7 28 28 PHE PHE A . n A 1 8 VAL 8 29 29 VAL VAL A . n A 1 9 THR 9 30 30 THR THR A . n A 1 10 ASP 10 31 31 ASP ASP A . n A 1 11 ALA 11 32 32 ALA ALA A . n A 1 12 LEU 12 33 33 LEU LEU A . n A 1 13 LYS 13 34 34 LYS LYS A . n A 1 14 THR 14 35 35 THR THR A . n A 1 15 PHE 15 36 36 PHE PHE A . n A 1 16 GLU 16 37 37 GLU GLU A . n A 1 17 ASN 17 38 38 ASN ASN A . n A 1 18 THR 18 39 39 THR THR A . n A 1 19 TYR 19 40 40 TYR TYR A . n A 1 20 LEU 20 41 41 LEU LEU A . n A 1 21 ASN 21 42 42 ASN ASN A . n A 1 22 ASP 22 43 43 ASP ASP A . n A 1 23 HIS 23 44 44 HIS HIS A . n A 1 24 LEU 24 45 45 LEU LEU A . n A 1 25 PRO 25 46 46 PRO PRO A . n A 1 26 HIS 26 47 47 HIS HIS A . n A 1 27 ASP 27 48 48 ASP ASP A . n A 1 28 ILE 28 49 49 ILE ILE A . n A 1 29 HIS 29 50 50 HIS HIS A . n A 1 30 LYS 30 51 51 LYS LYS A . n A 1 31 ASN 31 52 52 ASN ASN A . n A 1 32 VAL 32 53 53 VAL VAL A . n A 1 33 MET 33 54 54 MET MET A . n A 1 34 ARG 34 55 55 ARG ARG A . n A 1 35 MET 35 56 56 MET MET A . n A 1 36 VAL 36 57 57 VAL VAL A . n A 1 37 ASN 37 58 58 ASN ASN A . n A 1 38 HIS 38 59 59 HIS HIS A . n A 1 39 GLU 39 60 60 GLU GLU A . n A 1 40 VAL 40 61 61 VAL VAL A . n A 1 41 SER 41 62 62 SER SER A . n A 1 42 SER 42 63 63 SER SER A . n A 1 43 PHE 43 64 64 PHE PHE A . n A 1 44 GLY 44 65 65 GLY GLY A . n A 1 45 VAL 45 66 66 VAL VAL A . n A 1 46 VAL 46 67 67 VAL VAL A . n A 1 47 THR 47 68 68 THR THR A . n A 1 48 SER 48 69 69 SER SER A . n A 1 49 ALA 49 70 70 ALA ALA A . n A 1 50 GLU 50 71 71 GLU GLU A . n A 1 51 ASP 51 72 72 ASP ASP A . n A 1 52 SER 52 73 73 SER SER A . n A 1 53 TYR 53 74 74 TYR TYR A . n A 1 54 LEU 54 75 75 LEU LEU A . n A 1 55 GLY 55 76 76 GLY GLY A . n A 1 56 ALA 56 77 77 ALA ALA A . n A 1 57 VAL 57 78 78 VAL VAL A . n A 1 58 ASP 58 79 79 ASP ASP A . n A 1 59 GLU 59 80 80 GLU GLU A . n A 1 60 ASN 60 81 81 ASN ASN A . n A 1 61 THR 61 82 82 THR THR A . n A 1 62 LEU 62 83 83 LEU LEU A . n A 1 63 GLU 63 84 84 GLU GLU A . n A 1 64 GLN 64 85 85 GLN GLN A . n A 1 65 ALA 65 86 86 ALA ALA A . n A 1 66 THR 66 87 87 THR THR A . n A 1 67 TRP 67 88 88 TRP TRP A . n A 1 68 SER 68 89 89 SER SER A . n A 1 69 PHE 69 90 90 PHE PHE A . n A 1 70 LEU 70 91 91 LEU LEU A . n A 1 71 LYS 71 92 92 LYS LYS A . n A 1 72 ASP 72 93 93 ASP ASP A . n A 1 73 LEU 73 94 94 LEU LEU A . n A 1 74 LYS 74 95 95 LYS LYS A . n A 1 75 ARG 75 96 96 ARG ARG A . n A 1 76 ILE 76 97 97 ILE ILE A . n A 1 77 THR 77 98 98 THR THR A . n A 1 78 ASP 78 99 99 ASP ASP A . n A 1 79 SER 79 100 100 SER SER A . n A 1 80 ASP 80 101 101 ASP ASP A . n A 1 81 LEU 81 102 102 LEU LEU A . n A 1 82 LYS 82 103 103 LYS LYS A . n A 1 83 GLY 83 104 104 GLY GLY A . n A 1 84 GLU 84 105 105 GLU GLU A . n A 1 85 LEU 85 106 106 LEU LEU A . n A 1 86 PHE 86 107 107 PHE PHE A . n A 1 87 ILE 87 108 108 ILE ILE A . n A 1 88 LYS 88 109 109 LYS LYS A . n A 1 89 GLU 89 110 110 GLU GLU A . n A 1 90 LEU 90 111 111 LEU LEU A . n A 1 91 LEU 91 112 112 LEU LEU A . n A 1 92 TRP 92 113 113 TRP TRP A . n A 1 93 MET 93 114 114 MET MET A . n A 1 94 LEU 94 115 115 LEU LEU A . n A 1 95 ARG 95 116 116 ARG ARG A . n A 1 96 HIS 96 117 117 HIS HIS A . n A 1 97 GLN 97 118 118 GLN GLN A . n A 1 98 LYS 98 119 119 LYS LYS A . n A 1 99 ASP 99 120 120 ASP ASP A . n A 1 100 ILE 100 121 121 ILE ILE A . n A 1 101 PHE 101 122 122 PHE PHE A . n A 1 102 ASN 102 123 123 ASN ASN A . n A 1 103 ASN 103 124 124 ASN ASN A . n A 1 104 LEU 104 125 125 LEU LEU A . n A 1 105 ALA 105 126 126 ALA ALA A . n A 1 106 ARG 106 127 127 ARG ARG A . n A 1 107 GLN 107 128 128 GLN GLN A . n A 1 108 PHE 108 129 129 PHE PHE A . n A 1 109 GLN 109 130 130 GLN GLN A . n A 1 110 LYS 110 131 131 LYS LYS A . n A 1 111 GLU 111 132 132 GLU GLU A . n A 1 112 VAL 112 133 133 VAL VAL A . n A 1 113 LEU 113 134 134 LEU LEU A . n A 1 114 CYS 114 135 135 CYS CYS A . n A 1 115 PRO 115 136 136 PRO PRO A . n A 1 116 ASN 116 137 137 ASN ASN A . n A 1 117 LYS 117 138 138 LYS LYS A . n A 1 118 CYS 118 139 139 CYS CYS A . n A 1 119 GLY 119 140 140 GLY GLY A . n A 1 120 VAL 120 141 141 VAL VAL A . n A 1 121 MET 121 142 142 MET MET A . n A 1 122 SER 122 143 143 SER SER A . n A 1 123 GLN 123 144 144 GLN GLN A . n A 1 124 THR 124 145 145 THR THR A . n A 1 125 LEU 125 146 146 LEU LEU A . n A 1 126 ILE 126 147 147 ILE ILE A . n A 1 127 TRP 127 148 148 TRP TRP A . n A 1 128 CYS 128 149 149 CYS CYS A . n A 1 129 LEU 129 150 150 LEU LEU A . n A 1 130 LYS 130 151 151 LYS LYS A . n A 1 131 CYS 131 152 152 CYS CYS A . n A 1 132 GLU 132 153 153 GLU GLU A . n A 1 133 LYS 133 154 154 LYS LYS A . n A 1 134 GLN 134 155 155 GLN GLN A . n A 1 135 LEU 135 156 156 LEU LEU A . n A 1 136 HIS 136 157 157 HIS HIS A . n A 1 137 ILE 137 158 158 ILE ILE A . n A 1 138 CYS 138 159 159 CYS CYS A . n A 1 139 ARG 139 160 160 ARG ARG A . n A 1 140 LYS 140 161 161 LYS LYS A . n A 1 141 SER 141 162 162 SER SER A . n A 1 142 LEU 142 163 163 LEU LEU A . n A 1 143 ASP 143 164 164 ASP ASP A . n A 1 144 CYS 144 165 165 CYS CYS A . n A 1 145 GLY 145 166 166 GLY GLY A . n A 1 146 GLU 146 167 167 GLU GLU A . n A 1 147 ARG 147 168 168 ARG ARG A . n A 1 148 HIS 148 169 169 HIS HIS A . n A 1 149 ILE 149 170 170 ILE ILE A . n A 1 150 GLU 150 171 171 GLU GLU A . n A 1 151 VAL 151 172 172 VAL VAL A . n A 1 152 HIS 152 173 173 HIS HIS A . n A 1 153 ARG 153 174 174 ARG ARG A . n A 1 154 SER 154 175 175 SER SER A . n A 1 155 GLU 155 176 176 GLU GLU A . n A 1 156 ASP 156 177 177 ASP ASP A . n A 1 157 LEU 157 178 178 LEU LEU A . n A 1 158 VAL 158 179 179 VAL VAL A . n A 1 159 LEU 159 180 180 LEU LEU A . n A 1 160 ASP 160 181 181 ASP ASP A . n A 1 161 CYS 161 182 182 CYS CYS A . n A 1 162 LEU 162 183 183 LEU LEU A . n A 1 163 LEU 163 184 184 LEU LEU A . n A 1 164 SER 164 185 185 SER SER A . n A 1 165 TRP 165 186 186 TRP TRP A . n A 1 166 HIS 166 187 187 HIS HIS A . n A 1 167 ARG 167 188 188 ARG ARG A . n A 1 168 ALA 168 189 189 ALA ALA A . n A 1 169 SER 169 190 190 SER SER A . n A 1 170 LYS 170 191 191 LYS LYS A . n A 1 171 GLY 171 192 192 GLY GLY A . n A 1 172 LEU 172 193 193 LEU LEU A . n A 1 173 THR 173 194 194 THR THR A . n A 1 174 ASP 174 195 195 ASP ASP A . n A 1 175 TYR 175 196 196 TYR TYR A . n A 1 176 SER 176 197 197 SER SER A . n A 1 177 PHE 177 198 198 PHE PHE A . n A 1 178 TYR 178 199 199 TYR TYR A . n A 1 179 ARG 179 200 200 ARG ARG A . n A 1 180 VAL 180 201 201 VAL VAL A . n A 1 181 TRP 181 202 202 TRP TRP A . n A 1 182 GLU 182 203 203 GLU GLU A . n A 1 183 ASN 183 204 204 ASN ASN A . n A 1 184 SER 184 205 205 SER SER A . n A 1 185 SER 185 206 206 SER SER A . n A 1 186 GLU 186 207 207 GLU GLU A . n A 1 187 THR 187 208 208 THR THR A . n A 1 188 LEU 188 209 209 LEU LEU A . n A 1 189 ILE 189 210 210 ILE ILE A . n A 1 190 ALA 190 211 211 ALA ALA A . n A 1 191 LYS 191 212 212 LYS LYS A . n A 1 192 GLY 192 213 213 GLY GLY A . n A 1 193 LYS 193 214 214 LYS LYS A . n A 1 194 GLU 194 215 215 GLU GLU A . n A 1 195 PRO 195 216 216 PRO PRO A . n A 1 196 TYR 196 217 217 TYR TYR A . n A 1 197 LEU 197 218 218 LEU LEU A . n A 1 198 THR 198 219 219 THR THR A . n A 1 199 LYS 199 220 220 LYS LYS A . n A 1 200 SER 200 221 221 SER SER A . n A 1 201 MET 201 222 222 MET MET A . n A 1 202 VAL 202 223 223 VAL VAL A . n A 1 203 GLY 203 224 224 GLY GLY A . n A 1 204 PRO 204 225 225 PRO PRO A . n A 1 205 GLU 205 226 226 GLU GLU A . n A 1 206 ASP 206 227 227 ASP ASP A . n A 1 207 ALA 207 228 228 ALA ALA A . n A 1 208 GLY 208 229 229 GLY GLY A . n A 1 209 ASN 209 230 230 ASN ASN A . n A 1 210 TYR 210 231 231 TYR TYR A . n A 1 211 ARG 211 232 232 ARG ARG A . n A 1 212 CYS 212 233 233 CYS CYS A . n A 1 213 VAL 213 234 234 VAL VAL A . n A 1 214 LEU 214 235 235 LEU LEU A . n A 1 215 ASP 215 236 236 ASP ASP A . n A 1 216 THR 216 237 237 THR THR A . n A 1 217 ILE 217 238 238 ILE ILE A . n A 1 218 ASN 218 239 239 ASN ASN A . n A 1 219 GLN 219 240 240 GLN GLN A . n A 1 220 GLY 220 241 241 GLY GLY A . n A 1 221 HIS 221 242 242 HIS HIS A . n A 1 222 ALA 222 243 243 ALA ALA A . n A 1 223 THR 223 244 244 THR THR A . n A 1 224 VAL 224 245 245 VAL VAL A . n A 1 225 ILE 225 246 246 ILE ILE A . n A 1 226 ARG 226 247 247 ARG ARG A . n A 1 227 TYR 227 248 248 TYR TYR A . n A 1 228 ASP 228 249 249 ASP ASP A . n A 1 229 VAL 229 250 250 VAL VAL A . n A 1 230 THR 230 251 251 THR THR A . n A 1 231 VAL 231 252 252 VAL VAL A . n A 1 232 LEU 232 253 253 LEU LEU A . n A 1 233 PRO 233 254 254 PRO PRO A . n A 1 234 PRO 234 255 255 PRO PRO A . n A 1 235 LYS 235 256 256 LYS LYS A . n A 1 236 HIS 236 257 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 301 500 NAG NAG A . C 3 EPE 1 302 510 EPE EPE A . D 4 HOH 1 401 23 HOH HOH A . D 4 HOH 2 402 28 HOH HOH A . D 4 HOH 3 403 16 HOH HOH A . D 4 HOH 4 404 20 HOH HOH A . D 4 HOH 5 405 6 HOH HOH A . D 4 HOH 6 406 26 HOH HOH A . D 4 HOH 7 407 22 HOH HOH A . D 4 HOH 8 408 8 HOH HOH A . D 4 HOH 9 409 4 HOH HOH A . D 4 HOH 10 410 10 HOH HOH A . D 4 HOH 11 411 9 HOH HOH A . D 4 HOH 12 412 14 HOH HOH A . D 4 HOH 13 413 12 HOH HOH A . D 4 HOH 14 414 25 HOH HOH A . D 4 HOH 15 415 18 HOH HOH A . D 4 HOH 16 416 15 HOH HOH A . D 4 HOH 17 417 2 HOH HOH A . D 4 HOH 18 418 19 HOH HOH A . D 4 HOH 19 419 11 HOH HOH A . D 4 HOH 20 420 1 HOH HOH A . D 4 HOH 21 421 13 HOH HOH A . D 4 HOH 22 422 7 HOH HOH A . D 4 HOH 23 423 24 HOH HOH A . D 4 HOH 24 424 3 HOH HOH A . D 4 HOH 25 425 5 HOH HOH A . D 4 HOH 26 426 27 HOH HOH A . D 4 HOH 27 427 17 HOH HOH A . D 4 HOH 28 428 21 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-07-06 2 'Structure model' 1 1 2016-08-03 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' citation 3 3 'Structure model' entity 4 3 'Structure model' pdbx_chem_comp_identifier 5 3 'Structure model' pdbx_entity_nonpoly 6 3 'Structure model' pdbx_struct_oper_list 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_site 9 3 'Structure model' struct_site_gen 10 4 'Structure model' chem_comp 11 4 'Structure model' chem_comp_atom 12 4 'Structure model' chem_comp_bond 13 4 'Structure model' database_2 14 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_chem_comp.type' 3 3 'Structure model' '_citation.journal_id_CSD' 4 3 'Structure model' '_entity.pdbx_description' 5 3 'Structure model' '_pdbx_entity_nonpoly.name' 6 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 7 3 'Structure model' '_struct_conn.pdbx_role' 8 4 'Structure model' '_chem_comp.pdbx_synonyms' 9 4 'Structure model' '_database_2.pdbx_DOI' 10 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 30.5318 41.8295 32.5578 0.5918 0.5528 0.6090 -0.0048 -0.0119 -0.0052 4.4150 0.0300 3.1652 0.1886 -3.6133 -0.0481 0.1326 -0.1940 0.0372 0.0556 -0.0412 -0.0229 -0.0746 0.2191 0.0003 'X-RAY DIFFRACTION' 2 ? refined -5.8823 42.0207 57.5589 0.6185 0.5620 0.5399 -0.0755 -0.0220 -0.0025 3.1080 2.4521 2.0930 -0.5549 -0.5830 -0.3848 -0.0481 0.0193 -0.0944 0.0845 0.0233 0.3453 0.0828 -0.1737 0.0001 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'chain A and (resid 22 through 160 )' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'chain A and (resid 161 through 256 )' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10.1_2155 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 20151015 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 20151015 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.6.0 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HG1 A THR 237 ? ? O A GLY 241 ? ? 1.56 2 1 ND2 A ASN 204 ? ? O5 A NAG 301 ? ? 2.07 3 1 O A VAL 252 ? ? O A HOH 401 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 39 ? ? -106.45 -60.71 2 1 SER A 69 ? ? 67.68 -148.52 3 1 ALA A 70 ? ? 41.07 -125.00 4 1 GLU A 132 ? ? -105.41 -60.18 5 1 CYS A 135 ? ? 39.39 54.28 6 1 ASN A 239 ? ? -122.01 -60.43 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id HIS _pdbx_unobs_or_zero_occ_residues.auth_seq_id 257 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id HIS _pdbx_unobs_or_zero_occ_residues.label_seq_id 236 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EPE N1 N N N 88 EPE C2 C N N 89 EPE C3 C N N 90 EPE N4 N N N 91 EPE C5 C N N 92 EPE C6 C N N 93 EPE C7 C N N 94 EPE C8 C N N 95 EPE O8 O N N 96 EPE C9 C N N 97 EPE C10 C N N 98 EPE S S N N 99 EPE O1S O N N 100 EPE O2S O N N 101 EPE O3S O N N 102 EPE H21 H N N 103 EPE H22 H N N 104 EPE H31 H N N 105 EPE H32 H N N 106 EPE H51 H N N 107 EPE H52 H N N 108 EPE H61 H N N 109 EPE H62 H N N 110 EPE H71 H N N 111 EPE H72 H N N 112 EPE H81 H N N 113 EPE H82 H N N 114 EPE HO8 H N N 115 EPE H91 H N N 116 EPE H92 H N N 117 EPE H101 H N N 118 EPE H102 H N N 119 EPE HOS3 H N N 120 GLN N N N N 121 GLN CA C N S 122 GLN C C N N 123 GLN O O N N 124 GLN CB C N N 125 GLN CG C N N 126 GLN CD C N N 127 GLN OE1 O N N 128 GLN NE2 N N N 129 GLN OXT O N N 130 GLN H H N N 131 GLN H2 H N N 132 GLN HA H N N 133 GLN HB2 H N N 134 GLN HB3 H N N 135 GLN HG2 H N N 136 GLN HG3 H N N 137 GLN HE21 H N N 138 GLN HE22 H N N 139 GLN HXT H N N 140 GLU N N N N 141 GLU CA C N S 142 GLU C C N N 143 GLU O O N N 144 GLU CB C N N 145 GLU CG C N N 146 GLU CD C N N 147 GLU OE1 O N N 148 GLU OE2 O N N 149 GLU OXT O N N 150 GLU H H N N 151 GLU H2 H N N 152 GLU HA H N N 153 GLU HB2 H N N 154 GLU HB3 H N N 155 GLU HG2 H N N 156 GLU HG3 H N N 157 GLU HE2 H N N 158 GLU HXT H N N 159 GLY N N N N 160 GLY CA C N N 161 GLY C C N N 162 GLY O O N N 163 GLY OXT O N N 164 GLY H H N N 165 GLY H2 H N N 166 GLY HA2 H N N 167 GLY HA3 H N N 168 GLY HXT H N N 169 HIS N N N N 170 HIS CA C N S 171 HIS C C N N 172 HIS O O N N 173 HIS CB C N N 174 HIS CG C Y N 175 HIS ND1 N Y N 176 HIS CD2 C Y N 177 HIS CE1 C Y N 178 HIS NE2 N Y N 179 HIS OXT O N N 180 HIS H H N N 181 HIS H2 H N N 182 HIS HA H N N 183 HIS HB2 H N N 184 HIS HB3 H N N 185 HIS HD1 H N N 186 HIS HD2 H N N 187 HIS HE1 H N N 188 HIS HE2 H N N 189 HIS HXT H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 ILE N N N N 194 ILE CA C N S 195 ILE C C N N 196 ILE O O N N 197 ILE CB C N S 198 ILE CG1 C N N 199 ILE CG2 C N N 200 ILE CD1 C N N 201 ILE OXT O N N 202 ILE H H N N 203 ILE H2 H N N 204 ILE HA H N N 205 ILE HB H N N 206 ILE HG12 H N N 207 ILE HG13 H N N 208 ILE HG21 H N N 209 ILE HG22 H N N 210 ILE HG23 H N N 211 ILE HD11 H N N 212 ILE HD12 H N N 213 ILE HD13 H N N 214 ILE HXT H N N 215 LEU N N N N 216 LEU CA C N S 217 LEU C C N N 218 LEU O O N N 219 LEU CB C N N 220 LEU CG C N N 221 LEU CD1 C N N 222 LEU CD2 C N N 223 LEU OXT O N N 224 LEU H H N N 225 LEU H2 H N N 226 LEU HA H N N 227 LEU HB2 H N N 228 LEU HB3 H N N 229 LEU HG H N N 230 LEU HD11 H N N 231 LEU HD12 H N N 232 LEU HD13 H N N 233 LEU HD21 H N N 234 LEU HD22 H N N 235 LEU HD23 H N N 236 LEU HXT H N N 237 LYS N N N N 238 LYS CA C N S 239 LYS C C N N 240 LYS O O N N 241 LYS CB C N N 242 LYS CG C N N 243 LYS CD C N N 244 LYS CE C N N 245 LYS NZ N N N 246 LYS OXT O N N 247 LYS H H N N 248 LYS H2 H N N 249 LYS HA H N N 250 LYS HB2 H N N 251 LYS HB3 H N N 252 LYS HG2 H N N 253 LYS HG3 H N N 254 LYS HD2 H N N 255 LYS HD3 H N N 256 LYS HE2 H N N 257 LYS HE3 H N N 258 LYS HZ1 H N N 259 LYS HZ2 H N N 260 LYS HZ3 H N N 261 LYS HXT H N N 262 MET N N N N 263 MET CA C N S 264 MET C C N N 265 MET O O N N 266 MET CB C N N 267 MET CG C N N 268 MET SD S N N 269 MET CE C N N 270 MET OXT O N N 271 MET H H N N 272 MET H2 H N N 273 MET HA H N N 274 MET HB2 H N N 275 MET HB3 H N N 276 MET HG2 H N N 277 MET HG3 H N N 278 MET HE1 H N N 279 MET HE2 H N N 280 MET HE3 H N N 281 MET HXT H N N 282 NAG C1 C N R 283 NAG C2 C N R 284 NAG C3 C N R 285 NAG C4 C N S 286 NAG C5 C N R 287 NAG C6 C N N 288 NAG C7 C N N 289 NAG C8 C N N 290 NAG N2 N N N 291 NAG O1 O N N 292 NAG O3 O N N 293 NAG O4 O N N 294 NAG O5 O N N 295 NAG O6 O N N 296 NAG O7 O N N 297 NAG H1 H N N 298 NAG H2 H N N 299 NAG H3 H N N 300 NAG H4 H N N 301 NAG H5 H N N 302 NAG H61 H N N 303 NAG H62 H N N 304 NAG H81 H N N 305 NAG H82 H N N 306 NAG H83 H N N 307 NAG HN2 H N N 308 NAG HO1 H N N 309 NAG HO3 H N N 310 NAG HO4 H N N 311 NAG HO6 H N N 312 PHE N N N N 313 PHE CA C N S 314 PHE C C N N 315 PHE O O N N 316 PHE CB C N N 317 PHE CG C Y N 318 PHE CD1 C Y N 319 PHE CD2 C Y N 320 PHE CE1 C Y N 321 PHE CE2 C Y N 322 PHE CZ C Y N 323 PHE OXT O N N 324 PHE H H N N 325 PHE H2 H N N 326 PHE HA H N N 327 PHE HB2 H N N 328 PHE HB3 H N N 329 PHE HD1 H N N 330 PHE HD2 H N N 331 PHE HE1 H N N 332 PHE HE2 H N N 333 PHE HZ H N N 334 PHE HXT H N N 335 PRO N N N N 336 PRO CA C N S 337 PRO C C N N 338 PRO O O N N 339 PRO CB C N N 340 PRO CG C N N 341 PRO CD C N N 342 PRO OXT O N N 343 PRO H H N N 344 PRO HA H N N 345 PRO HB2 H N N 346 PRO HB3 H N N 347 PRO HG2 H N N 348 PRO HG3 H N N 349 PRO HD2 H N N 350 PRO HD3 H N N 351 PRO HXT H N N 352 SER N N N N 353 SER CA C N S 354 SER C C N N 355 SER O O N N 356 SER CB C N N 357 SER OG O N N 358 SER OXT O N N 359 SER H H N N 360 SER H2 H N N 361 SER HA H N N 362 SER HB2 H N N 363 SER HB3 H N N 364 SER HG H N N 365 SER HXT H N N 366 THR N N N N 367 THR CA C N S 368 THR C C N N 369 THR O O N N 370 THR CB C N R 371 THR OG1 O N N 372 THR CG2 C N N 373 THR OXT O N N 374 THR H H N N 375 THR H2 H N N 376 THR HA H N N 377 THR HB H N N 378 THR HG1 H N N 379 THR HG21 H N N 380 THR HG22 H N N 381 THR HG23 H N N 382 THR HXT H N N 383 TRP N N N N 384 TRP CA C N S 385 TRP C C N N 386 TRP O O N N 387 TRP CB C N N 388 TRP CG C Y N 389 TRP CD1 C Y N 390 TRP CD2 C Y N 391 TRP NE1 N Y N 392 TRP CE2 C Y N 393 TRP CE3 C Y N 394 TRP CZ2 C Y N 395 TRP CZ3 C Y N 396 TRP CH2 C Y N 397 TRP OXT O N N 398 TRP H H N N 399 TRP H2 H N N 400 TRP HA H N N 401 TRP HB2 H N N 402 TRP HB3 H N N 403 TRP HD1 H N N 404 TRP HE1 H N N 405 TRP HE3 H N N 406 TRP HZ2 H N N 407 TRP HZ3 H N N 408 TRP HH2 H N N 409 TRP HXT H N N 410 TYR N N N N 411 TYR CA C N S 412 TYR C C N N 413 TYR O O N N 414 TYR CB C N N 415 TYR CG C Y N 416 TYR CD1 C Y N 417 TYR CD2 C Y N 418 TYR CE1 C Y N 419 TYR CE2 C Y N 420 TYR CZ C Y N 421 TYR OH O N N 422 TYR OXT O N N 423 TYR H H N N 424 TYR H2 H N N 425 TYR HA H N N 426 TYR HB2 H N N 427 TYR HB3 H N N 428 TYR HD1 H N N 429 TYR HD2 H N N 430 TYR HE1 H N N 431 TYR HE2 H N N 432 TYR HH H N N 433 TYR HXT H N N 434 VAL N N N N 435 VAL CA C N S 436 VAL C C N N 437 VAL O O N N 438 VAL CB C N N 439 VAL CG1 C N N 440 VAL CG2 C N N 441 VAL OXT O N N 442 VAL H H N N 443 VAL H2 H N N 444 VAL HA H N N 445 VAL HB H N N 446 VAL HG11 H N N 447 VAL HG12 H N N 448 VAL HG13 H N N 449 VAL HG21 H N N 450 VAL HG22 H N N 451 VAL HG23 H N N 452 VAL HXT H N N 453 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EPE N1 C2 sing N N 83 EPE N1 C6 sing N N 84 EPE N1 C9 sing N N 85 EPE C2 C3 sing N N 86 EPE C2 H21 sing N N 87 EPE C2 H22 sing N N 88 EPE C3 N4 sing N N 89 EPE C3 H31 sing N N 90 EPE C3 H32 sing N N 91 EPE N4 C5 sing N N 92 EPE N4 C7 sing N N 93 EPE C5 C6 sing N N 94 EPE C5 H51 sing N N 95 EPE C5 H52 sing N N 96 EPE C6 H61 sing N N 97 EPE C6 H62 sing N N 98 EPE C7 C8 sing N N 99 EPE C7 H71 sing N N 100 EPE C7 H72 sing N N 101 EPE C8 O8 sing N N 102 EPE C8 H81 sing N N 103 EPE C8 H82 sing N N 104 EPE O8 HO8 sing N N 105 EPE C9 C10 sing N N 106 EPE C9 H91 sing N N 107 EPE C9 H92 sing N N 108 EPE C10 S sing N N 109 EPE C10 H101 sing N N 110 EPE C10 H102 sing N N 111 EPE S O1S doub N N 112 EPE S O2S doub N N 113 EPE S O3S sing N N 114 EPE O3S HOS3 sing N N 115 GLN N CA sing N N 116 GLN N H sing N N 117 GLN N H2 sing N N 118 GLN CA C sing N N 119 GLN CA CB sing N N 120 GLN CA HA sing N N 121 GLN C O doub N N 122 GLN C OXT sing N N 123 GLN CB CG sing N N 124 GLN CB HB2 sing N N 125 GLN CB HB3 sing N N 126 GLN CG CD sing N N 127 GLN CG HG2 sing N N 128 GLN CG HG3 sing N N 129 GLN CD OE1 doub N N 130 GLN CD NE2 sing N N 131 GLN NE2 HE21 sing N N 132 GLN NE2 HE22 sing N N 133 GLN OXT HXT sing N N 134 GLU N CA sing N N 135 GLU N H sing N N 136 GLU N H2 sing N N 137 GLU CA C sing N N 138 GLU CA CB sing N N 139 GLU CA HA sing N N 140 GLU C O doub N N 141 GLU C OXT sing N N 142 GLU CB CG sing N N 143 GLU CB HB2 sing N N 144 GLU CB HB3 sing N N 145 GLU CG CD sing N N 146 GLU CG HG2 sing N N 147 GLU CG HG3 sing N N 148 GLU CD OE1 doub N N 149 GLU CD OE2 sing N N 150 GLU OE2 HE2 sing N N 151 GLU OXT HXT sing N N 152 GLY N CA sing N N 153 GLY N H sing N N 154 GLY N H2 sing N N 155 GLY CA C sing N N 156 GLY CA HA2 sing N N 157 GLY CA HA3 sing N N 158 GLY C O doub N N 159 GLY C OXT sing N N 160 GLY OXT HXT sing N N 161 HIS N CA sing N N 162 HIS N H sing N N 163 HIS N H2 sing N N 164 HIS CA C sing N N 165 HIS CA CB sing N N 166 HIS CA HA sing N N 167 HIS C O doub N N 168 HIS C OXT sing N N 169 HIS CB CG sing N N 170 HIS CB HB2 sing N N 171 HIS CB HB3 sing N N 172 HIS CG ND1 sing Y N 173 HIS CG CD2 doub Y N 174 HIS ND1 CE1 doub Y N 175 HIS ND1 HD1 sing N N 176 HIS CD2 NE2 sing Y N 177 HIS CD2 HD2 sing N N 178 HIS CE1 NE2 sing Y N 179 HIS CE1 HE1 sing N N 180 HIS NE2 HE2 sing N N 181 HIS OXT HXT sing N N 182 HOH O H1 sing N N 183 HOH O H2 sing N N 184 ILE N CA sing N N 185 ILE N H sing N N 186 ILE N H2 sing N N 187 ILE CA C sing N N 188 ILE CA CB sing N N 189 ILE CA HA sing N N 190 ILE C O doub N N 191 ILE C OXT sing N N 192 ILE CB CG1 sing N N 193 ILE CB CG2 sing N N 194 ILE CB HB sing N N 195 ILE CG1 CD1 sing N N 196 ILE CG1 HG12 sing N N 197 ILE CG1 HG13 sing N N 198 ILE CG2 HG21 sing N N 199 ILE CG2 HG22 sing N N 200 ILE CG2 HG23 sing N N 201 ILE CD1 HD11 sing N N 202 ILE CD1 HD12 sing N N 203 ILE CD1 HD13 sing N N 204 ILE OXT HXT sing N N 205 LEU N CA sing N N 206 LEU N H sing N N 207 LEU N H2 sing N N 208 LEU CA C sing N N 209 LEU CA CB sing N N 210 LEU CA HA sing N N 211 LEU C O doub N N 212 LEU C OXT sing N N 213 LEU CB CG sing N N 214 LEU CB HB2 sing N N 215 LEU CB HB3 sing N N 216 LEU CG CD1 sing N N 217 LEU CG CD2 sing N N 218 LEU CG HG sing N N 219 LEU CD1 HD11 sing N N 220 LEU CD1 HD12 sing N N 221 LEU CD1 HD13 sing N N 222 LEU CD2 HD21 sing N N 223 LEU CD2 HD22 sing N N 224 LEU CD2 HD23 sing N N 225 LEU OXT HXT sing N N 226 LYS N CA sing N N 227 LYS N H sing N N 228 LYS N H2 sing N N 229 LYS CA C sing N N 230 LYS CA CB sing N N 231 LYS CA HA sing N N 232 LYS C O doub N N 233 LYS C OXT sing N N 234 LYS CB CG sing N N 235 LYS CB HB2 sing N N 236 LYS CB HB3 sing N N 237 LYS CG CD sing N N 238 LYS CG HG2 sing N N 239 LYS CG HG3 sing N N 240 LYS CD CE sing N N 241 LYS CD HD2 sing N N 242 LYS CD HD3 sing N N 243 LYS CE NZ sing N N 244 LYS CE HE2 sing N N 245 LYS CE HE3 sing N N 246 LYS NZ HZ1 sing N N 247 LYS NZ HZ2 sing N N 248 LYS NZ HZ3 sing N N 249 LYS OXT HXT sing N N 250 MET N CA sing N N 251 MET N H sing N N 252 MET N H2 sing N N 253 MET CA C sing N N 254 MET CA CB sing N N 255 MET CA HA sing N N 256 MET C O doub N N 257 MET C OXT sing N N 258 MET CB CG sing N N 259 MET CB HB2 sing N N 260 MET CB HB3 sing N N 261 MET CG SD sing N N 262 MET CG HG2 sing N N 263 MET CG HG3 sing N N 264 MET SD CE sing N N 265 MET CE HE1 sing N N 266 MET CE HE2 sing N N 267 MET CE HE3 sing N N 268 MET OXT HXT sing N N 269 NAG C1 C2 sing N N 270 NAG C1 O1 sing N N 271 NAG C1 O5 sing N N 272 NAG C1 H1 sing N N 273 NAG C2 C3 sing N N 274 NAG C2 N2 sing N N 275 NAG C2 H2 sing N N 276 NAG C3 C4 sing N N 277 NAG C3 O3 sing N N 278 NAG C3 H3 sing N N 279 NAG C4 C5 sing N N 280 NAG C4 O4 sing N N 281 NAG C4 H4 sing N N 282 NAG C5 C6 sing N N 283 NAG C5 O5 sing N N 284 NAG C5 H5 sing N N 285 NAG C6 O6 sing N N 286 NAG C6 H61 sing N N 287 NAG C6 H62 sing N N 288 NAG C7 C8 sing N N 289 NAG C7 N2 sing N N 290 NAG C7 O7 doub N N 291 NAG C8 H81 sing N N 292 NAG C8 H82 sing N N 293 NAG C8 H83 sing N N 294 NAG N2 HN2 sing N N 295 NAG O1 HO1 sing N N 296 NAG O3 HO3 sing N N 297 NAG O4 HO4 sing N N 298 NAG O6 HO6 sing N N 299 PHE N CA sing N N 300 PHE N H sing N N 301 PHE N H2 sing N N 302 PHE CA C sing N N 303 PHE CA CB sing N N 304 PHE CA HA sing N N 305 PHE C O doub N N 306 PHE C OXT sing N N 307 PHE CB CG sing N N 308 PHE CB HB2 sing N N 309 PHE CB HB3 sing N N 310 PHE CG CD1 doub Y N 311 PHE CG CD2 sing Y N 312 PHE CD1 CE1 sing Y N 313 PHE CD1 HD1 sing N N 314 PHE CD2 CE2 doub Y N 315 PHE CD2 HD2 sing N N 316 PHE CE1 CZ doub Y N 317 PHE CE1 HE1 sing N N 318 PHE CE2 CZ sing Y N 319 PHE CE2 HE2 sing N N 320 PHE CZ HZ sing N N 321 PHE OXT HXT sing N N 322 PRO N CA sing N N 323 PRO N CD sing N N 324 PRO N H sing N N 325 PRO CA C sing N N 326 PRO CA CB sing N N 327 PRO CA HA sing N N 328 PRO C O doub N N 329 PRO C OXT sing N N 330 PRO CB CG sing N N 331 PRO CB HB2 sing N N 332 PRO CB HB3 sing N N 333 PRO CG CD sing N N 334 PRO CG HG2 sing N N 335 PRO CG HG3 sing N N 336 PRO CD HD2 sing N N 337 PRO CD HD3 sing N N 338 PRO OXT HXT sing N N 339 SER N CA sing N N 340 SER N H sing N N 341 SER N H2 sing N N 342 SER CA C sing N N 343 SER CA CB sing N N 344 SER CA HA sing N N 345 SER C O doub N N 346 SER C OXT sing N N 347 SER CB OG sing N N 348 SER CB HB2 sing N N 349 SER CB HB3 sing N N 350 SER OG HG sing N N 351 SER OXT HXT sing N N 352 THR N CA sing N N 353 THR N H sing N N 354 THR N H2 sing N N 355 THR CA C sing N N 356 THR CA CB sing N N 357 THR CA HA sing N N 358 THR C O doub N N 359 THR C OXT sing N N 360 THR CB OG1 sing N N 361 THR CB CG2 sing N N 362 THR CB HB sing N N 363 THR OG1 HG1 sing N N 364 THR CG2 HG21 sing N N 365 THR CG2 HG22 sing N N 366 THR CG2 HG23 sing N N 367 THR OXT HXT sing N N 368 TRP N CA sing N N 369 TRP N H sing N N 370 TRP N H2 sing N N 371 TRP CA C sing N N 372 TRP CA CB sing N N 373 TRP CA HA sing N N 374 TRP C O doub N N 375 TRP C OXT sing N N 376 TRP CB CG sing N N 377 TRP CB HB2 sing N N 378 TRP CB HB3 sing N N 379 TRP CG CD1 doub Y N 380 TRP CG CD2 sing Y N 381 TRP CD1 NE1 sing Y N 382 TRP CD1 HD1 sing N N 383 TRP CD2 CE2 doub Y N 384 TRP CD2 CE3 sing Y N 385 TRP NE1 CE2 sing Y N 386 TRP NE1 HE1 sing N N 387 TRP CE2 CZ2 sing Y N 388 TRP CE3 CZ3 doub Y N 389 TRP CE3 HE3 sing N N 390 TRP CZ2 CH2 doub Y N 391 TRP CZ2 HZ2 sing N N 392 TRP CZ3 CH2 sing Y N 393 TRP CZ3 HZ3 sing N N 394 TRP CH2 HH2 sing N N 395 TRP OXT HXT sing N N 396 TYR N CA sing N N 397 TYR N H sing N N 398 TYR N H2 sing N N 399 TYR CA C sing N N 400 TYR CA CB sing N N 401 TYR CA HA sing N N 402 TYR C O doub N N 403 TYR C OXT sing N N 404 TYR CB CG sing N N 405 TYR CB HB2 sing N N 406 TYR CB HB3 sing N N 407 TYR CG CD1 doub Y N 408 TYR CG CD2 sing Y N 409 TYR CD1 CE1 sing Y N 410 TYR CD1 HD1 sing N N 411 TYR CD2 CE2 doub Y N 412 TYR CD2 HD2 sing N N 413 TYR CE1 CZ doub Y N 414 TYR CE1 HE1 sing N N 415 TYR CE2 CZ sing Y N 416 TYR CE2 HE2 sing N N 417 TYR CZ OH sing N N 418 TYR OH HH sing N N 419 TYR OXT HXT sing N N 420 VAL N CA sing N N 421 VAL N H sing N N 422 VAL N H2 sing N N 423 VAL CA C sing N N 424 VAL CA CB sing N N 425 VAL CA HA sing N N 426 VAL C O doub N N 427 VAL C OXT sing N N 428 VAL CB CG1 sing N N 429 VAL CB CG2 sing N N 430 VAL CB HB sing N N 431 VAL CG1 HG11 sing N N 432 VAL CG1 HG12 sing N N 433 VAL CG1 HG13 sing N N 434 VAL CG2 HG21 sing N N 435 VAL CG2 HG22 sing N N 436 VAL CG2 HG23 sing N N 437 VAL OXT HXT sing N N 438 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Karolinska Institutet' Sweden ? 1 'Swedish Research Council' Sweden 2012-5093 2 'Goran Gustafsson Foundation for Research in Natural Sciences and Medicine' Sweden ? 3 'Sven and Ebba-Christina Hagberg foundation' Sweden ? 4 'EMBO Young Investigator' ? ? 5 ;European Research Council under the European Union's Seventh Framework Programme (FP7/2007-2013) ; ? 'ERC 260759' 6 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5JK9 _pdbx_initial_refinement_model.details ? #