HEADER HYDROLASE 08-JUN-16 5B7N TITLE CRYSTAL STRUCTURE OF PERIPLASMIC 5-METHYLTHIOADENOSINE/S- TITLE 2 ADENOSYLHOMOCYSTEINE NUCLEOSIDASE FROM AEROMONAS HYDROPHILA COMPND MOL_ID: 1; COMPND 2 MOLECULE: MTA/SAH NUCLEOSIDASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 7-254; COMPND 5 EC: 3.2.2.16,3.2.2.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEROMONAS HYDROPHILA; SOURCE 3 ORGANISM_TAXID: 380703; SOURCE 4 STRAIN: ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240; SOURCE 5 GENE: MTNN-1, AHA_0953; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AEROMONAS HYDROPHILA, MTAN-1, MTAN-2, SAH, MTA, 5-DAO, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.XU REVDAT 3 20-MAR-24 5B7N 1 REMARK REVDAT 2 13-DEC-17 5B7N 1 JRNL REVDAT 1 21-DEC-16 5B7N 0 JRNL AUTH Y.XU,L.WANG,J.CHEN,J.ZHAO,S.FAN,Y.DONG,N.C.HA,C.QUAN JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSES OF PERIPLASMIC JRNL TITL 2 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE JRNL TITL 3 FROM AEROMONAS HYDROPHILA. JRNL REF BIOCHEMISTRY V. 56 5347 2017 JRNL REFN ISSN 1520-4995 JRNL PMID 28862845 JRNL DOI 10.1021/ACS.BIOCHEM.7B00691 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.460 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 142435 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 7087 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.5199 - 4.3473 1.00 4835 241 0.1425 0.1418 REMARK 3 2 4.3473 - 3.4508 1.00 4640 227 0.1305 0.1713 REMARK 3 3 3.4508 - 3.0147 1.00 4626 236 0.1493 0.1705 REMARK 3 4 3.0147 - 2.7391 1.00 4581 262 0.1509 0.1822 REMARK 3 5 2.7391 - 2.5428 1.00 4583 216 0.1483 0.1565 REMARK 3 6 2.5428 - 2.3929 1.00 4596 217 0.1490 0.1643 REMARK 3 7 2.3929 - 2.2730 0.99 4572 195 0.1433 0.1917 REMARK 3 8 2.2730 - 2.1741 1.00 4522 259 0.1388 0.1600 REMARK 3 9 2.1741 - 2.0904 1.00 4503 257 0.1380 0.1618 REMARK 3 10 2.0904 - 2.0182 1.00 4486 264 0.1440 0.1749 REMARK 3 11 2.0182 - 1.9551 1.00 4587 205 0.1429 0.1754 REMARK 3 12 1.9551 - 1.8992 0.99 4495 244 0.1508 0.1586 REMARK 3 13 1.8992 - 1.8492 1.00 4496 216 0.1553 0.1875 REMARK 3 14 1.8492 - 1.8041 0.99 4499 251 0.1709 0.2009 REMARK 3 15 1.8041 - 1.7631 0.99 4546 226 0.1760 0.2020 REMARK 3 16 1.7631 - 1.7256 0.99 4492 231 0.1820 0.2144 REMARK 3 17 1.7256 - 1.6911 0.99 4456 242 0.1954 0.2091 REMARK 3 18 1.6911 - 1.6592 0.99 4506 263 0.2033 0.2416 REMARK 3 19 1.6592 - 1.6295 0.99 4472 256 0.2178 0.2362 REMARK 3 20 1.6295 - 1.6019 0.99 4476 237 0.2231 0.2309 REMARK 3 21 1.6019 - 1.5761 0.99 4466 209 0.2385 0.2455 REMARK 3 22 1.5761 - 1.5518 0.99 4487 257 0.2463 0.2452 REMARK 3 23 1.5518 - 1.5290 0.99 4459 235 0.2645 0.2798 REMARK 3 24 1.5290 - 1.5074 0.99 4456 232 0.2767 0.3073 REMARK 3 25 1.5074 - 1.4871 0.99 4453 219 0.2855 0.3010 REMARK 3 26 1.4871 - 1.4678 0.99 4485 230 0.2998 0.3087 REMARK 3 27 1.4678 - 1.4494 0.99 4425 260 0.3151 0.3186 REMARK 3 28 1.4494 - 1.4319 0.98 4423 233 0.3226 0.3313 REMARK 3 29 1.4319 - 1.4153 0.98 4419 243 0.3376 0.3515 REMARK 3 30 1.4153 - 1.3994 0.95 4306 224 0.3516 0.3789 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3987 REMARK 3 ANGLE : 1.066 5425 REMARK 3 CHIRALITY : 0.044 604 REMARK 3 PLANARITY : 0.005 705 REMARK 3 DIHEDRAL : 15.929 1437 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5B7N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1300000671. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.985 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 142435 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 49.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6% (W/V) POLYETHYLENE GLYCOL 4000, 0.1 REMARK 280 M SODIUM ACETATE TRIHYDRATE (PH 4.6), EVAPORATION, TEMPERATURE REMARK 280 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.64100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 79.28200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 79.28200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.64100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 711 LIES ON A SPECIAL POSITION. REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 219 CA CB CG CD OE1 OE2 REMARK 480 GLU B 219 CA CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 668 O HOH B 721 2.05 REMARK 500 O3 GOL A 302 O HOH A 401 2.09 REMARK 500 O HOH B 619 O HOH B 722 2.11 REMARK 500 O HOH B 660 O HOH B 764 2.12 REMARK 500 O HOH B 674 O HOH B 696 2.13 REMARK 500 O HOH A 596 O HOH A 652 2.13 REMARK 500 O HOH B 673 O HOH B 692 2.14 REMARK 500 O HOH A 579 O HOH A 661 2.14 REMARK 500 O HOH A 590 O HOH A 599 2.15 REMARK 500 O HOH B 632 O HOH B 734 2.16 REMARK 500 O HOH B 680 O HOH B 749 2.16 REMARK 500 O TYR B 267 O HOH B 401 2.16 REMARK 500 O HOH B 764 O HOH B 769 2.16 REMARK 500 O HOH B 629 O HOH B 728 2.16 REMARK 500 O HOH B 656 O HOH B 664 2.17 REMARK 500 OD2 ASP B 38 O HOH B 402 2.17 REMARK 500 O HOH B 660 O HOH B 679 2.17 REMARK 500 O HOH A 552 O HOH A 613 2.17 REMARK 500 O HOH A 663 O HOH A 735 2.17 REMARK 500 O HOH A 602 O HOH A 636 2.18 REMARK 500 O HOH B 638 O HOH B 654 2.18 REMARK 500 O HOH B 659 O HOH B 736 2.19 REMARK 500 O HOH B 640 O HOH B 672 2.19 REMARK 500 O HOH B 564 O HOH B 698 2.19 REMARK 500 O HOH A 633 O HOH A 737 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 458 O HOH A 458 6555 1.90 REMARK 500 O HOH A 672 O HOH B 475 4655 1.99 REMARK 500 O HOH A 407 O HOH B 721 4655 2.07 REMARK 500 O HOH A 742 O HOH B 603 6555 2.08 REMARK 500 O HOH A 574 O HOH B 656 4655 2.14 REMARK 500 O HOH A 540 O HOH A 675 3654 2.14 REMARK 500 O HOH A 690 O HOH B 633 2545 2.18 REMARK 500 O HOH A 688 O HOH B 417 2545 2.18 REMARK 500 O HOH A 675 O HOH B 551 4655 2.18 REMARK 500 O HOH A 723 O HOH B 774 5544 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 77 -173.15 61.48 REMARK 500 GLU A 221 -32.03 -131.96 REMARK 500 GLU B 77 -175.46 64.11 REMARK 500 GLU B 221 -30.68 -130.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 765 DISTANCE = 6.71 ANGSTROMS REMARK 525 HOH A 766 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH B 779 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH B 780 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH B 781 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH B 782 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH B 783 DISTANCE = 7.03 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5B7P RELATED DB: PDB REMARK 900 RELATED ID: 5B7Q RELATED DB: PDB DBREF 5B7N A 28 275 UNP A0KGU9 A0KGU9_AERHH 7 254 DBREF 5B7N B 28 275 UNP A0KGU9 A0KGU9_AERHH 7 254 SEQRES 1 A 248 SER ALA PRO ILE LEU ILE GLN GLY ALA MET ASP VAL GLU SEQRES 2 A 248 VAL GLU THR LEU VAL ALA ALA LEU LYS ASP LYS GLN GLU SEQRES 3 A 248 LEU THR VAL GLY SER TRP THR TYR TRP GLN GLY THR LEU SEQRES 4 A 248 SER GLY TYR PRO VAL VAL VAL SER ARG THR GLU VAL GLY SEQRES 5 A 248 LEU ALA ASN ALA ALA ALA ALA THR THR LEU ALA MET GLU SEQRES 6 A 248 ARG PHE GLN PRO ARG LEU VAL ILE ASN GLN GLY THR ALA SEQRES 7 A 248 GLY GLY HIS ASP PRO ALA LEU HIS ARG GLY ASP ILE VAL SEQRES 8 A 248 ILE GLY THR LYS SER PHE ASN MET GLY ALA TYR ARG SER SEQRES 9 A 248 ASP LEU THR PRO ALA GLU GLN GLY VAL ASP PRO SER LYS SEQRES 10 A 248 TRP HIS ASN PHE GLU VAL THR MET ARG LEU ARG ASP ASN SEQRES 11 A 248 GLY LYS LEU VAL GLU HIS SER SER PHE ALA GLY ASP PRO SEQRES 12 A 248 GLU LEU VAL GLY ARG ALA LEU GLY MET ALA ASP ARG TYR SEQRES 13 A 248 ARG HIS GLY ARG VAL VAL PRO GLY ILE ILE GLY THR ALA SEQRES 14 A 248 ASP GLU TRP ASN ARG GLN VAL ALA ARG ILE ASN TRP LEU SEQRES 15 A 248 HIS GLN THR TYR GLN THR ALA ALA GLU GLU MET GLU THR SEQRES 16 A 248 SER SER ALA ALA LEU VAL ALA GLU ALA TYR LYS VAL PRO SEQRES 17 A 248 PHE VAL GLY ILE ARG VAL LEU SER ASN THR ASP LEU HIS SEQRES 18 A 248 GLY GLU GLU PHE ASP PRO GLN THR ALA ILE HIS CYS GLN SEQRES 19 A 248 GLN PHE VAL ILE ASP TYR ALA LYS ALA LEU ILE ASN GLY SEQRES 20 A 248 PHE SEQRES 1 B 248 SER ALA PRO ILE LEU ILE GLN GLY ALA MET ASP VAL GLU SEQRES 2 B 248 VAL GLU THR LEU VAL ALA ALA LEU LYS ASP LYS GLN GLU SEQRES 3 B 248 LEU THR VAL GLY SER TRP THR TYR TRP GLN GLY THR LEU SEQRES 4 B 248 SER GLY TYR PRO VAL VAL VAL SER ARG THR GLU VAL GLY SEQRES 5 B 248 LEU ALA ASN ALA ALA ALA ALA THR THR LEU ALA MET GLU SEQRES 6 B 248 ARG PHE GLN PRO ARG LEU VAL ILE ASN GLN GLY THR ALA SEQRES 7 B 248 GLY GLY HIS ASP PRO ALA LEU HIS ARG GLY ASP ILE VAL SEQRES 8 B 248 ILE GLY THR LYS SER PHE ASN MET GLY ALA TYR ARG SER SEQRES 9 B 248 ASP LEU THR PRO ALA GLU GLN GLY VAL ASP PRO SER LYS SEQRES 10 B 248 TRP HIS ASN PHE GLU VAL THR MET ARG LEU ARG ASP ASN SEQRES 11 B 248 GLY LYS LEU VAL GLU HIS SER SER PHE ALA GLY ASP PRO SEQRES 12 B 248 GLU LEU VAL GLY ARG ALA LEU GLY MET ALA ASP ARG TYR SEQRES 13 B 248 ARG HIS GLY ARG VAL VAL PRO GLY ILE ILE GLY THR ALA SEQRES 14 B 248 ASP GLU TRP ASN ARG GLN VAL ALA ARG ILE ASN TRP LEU SEQRES 15 B 248 HIS GLN THR TYR GLN THR ALA ALA GLU GLU MET GLU THR SEQRES 16 B 248 SER SER ALA ALA LEU VAL ALA GLU ALA TYR LYS VAL PRO SEQRES 17 B 248 PHE VAL GLY ILE ARG VAL LEU SER ASN THR ASP LEU HIS SEQRES 18 B 248 GLY GLU GLU PHE ASP PRO GLN THR ALA ILE HIS CYS GLN SEQRES 19 B 248 GLN PHE VAL ILE ASP TYR ALA LYS ALA LEU ILE ASN GLY SEQRES 20 B 248 PHE HET SAH A 301 26 HET GOL A 302 6 HET SAH B 301 26 HET GOL B 302 6 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SAH 2(C14 H20 N6 O5 S) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 7 HOH *749(H2 O) HELIX 1 AA1 MET A 37 GLU A 40 5 4 HELIX 2 AA2 VAL A 41 LEU A 48 1 8 HELIX 3 AA3 GLY A 79 GLN A 95 1 17 HELIX 4 AA4 PRO A 135 GLY A 139 5 5 HELIX 5 AA5 ASP A 141 TRP A 145 5 5 HELIX 6 AA6 GLU A 149 ARG A 153 5 5 HELIX 7 AA7 ASP A 169 MET A 179 1 11 HELIX 8 AA8 ALA A 180 TYR A 183 5 4 HELIX 9 AA9 GLN A 202 GLN A 214 1 13 HELIX 10 AB1 GLU A 221 LYS A 233 1 13 HELIX 11 AB2 PRO A 254 PHE A 275 1 22 HELIX 12 AB3 MET B 37 GLU B 40 5 4 HELIX 13 AB4 VAL B 41 LEU B 48 1 8 HELIX 14 AB5 GLY B 79 GLN B 95 1 17 HELIX 15 AB6 PRO B 135 GLY B 139 5 5 HELIX 16 AB7 ASP B 141 TRP B 145 5 5 HELIX 17 AB8 GLU B 149 ARG B 153 5 5 HELIX 18 AB9 ASP B 169 MET B 179 1 11 HELIX 19 AC1 ALA B 180 TYR B 183 5 4 HELIX 20 AC2 GLN B 202 GLN B 214 1 13 HELIX 21 AC3 GLU B 221 TYR B 232 1 12 HELIX 22 AC4 PRO B 254 PHE B 275 1 22 SHEET 1 AA1 9 LYS A 49 VAL A 56 0 SHEET 2 AA1 9 TRP A 59 LEU A 66 -1 O TYR A 61 N LEU A 54 SHEET 3 AA1 9 TYR A 69 ARG A 75 -1 O VAL A 73 N TRP A 62 SHEET 4 AA1 9 ILE A 31 GLY A 35 1 N ILE A 33 O SER A 74 SHEET 5 AA1 9 LEU A 98 GLY A 107 1 O ILE A 100 N LEU A 32 SHEET 6 AA1 9 THR A 215 GLU A 219 -1 O GLU A 218 N GLY A 106 SHEET 7 AA1 9 VAL A 188 THR A 195 1 N ILE A 192 O ALA A 216 SHEET 8 AA1 9 ILE A 117 ASN A 125 1 N ILE A 119 O VAL A 189 SHEET 9 AA1 9 PHE A 166 ALA A 167 -1 O PHE A 166 N SER A 123 SHEET 1 AA2 8 LYS A 49 VAL A 56 0 SHEET 2 AA2 8 TRP A 59 LEU A 66 -1 O TYR A 61 N LEU A 54 SHEET 3 AA2 8 TYR A 69 ARG A 75 -1 O VAL A 73 N TRP A 62 SHEET 4 AA2 8 ILE A 31 GLY A 35 1 N ILE A 33 O SER A 74 SHEET 5 AA2 8 LEU A 98 GLY A 107 1 O ILE A 100 N LEU A 32 SHEET 6 AA2 8 PHE A 236 ASN A 244 1 O ILE A 239 N ASN A 101 SHEET 7 AA2 8 ILE A 117 ASN A 125 -1 N VAL A 118 O ARG A 240 SHEET 8 AA2 8 PHE A 166 ALA A 167 -1 O PHE A 166 N SER A 123 SHEET 1 AA3 3 HIS A 146 ASN A 147 0 SHEET 2 AA3 3 TYR A 129 ARG A 130 -1 N ARG A 130 O HIS A 146 SHEET 3 AA3 3 GLU B 198 TRP B 199 1 O TRP B 199 N TYR A 129 SHEET 1 AA4 2 LEU A 154 ASP A 156 0 SHEET 2 AA4 2 LYS A 159 VAL A 161 -1 O VAL A 161 N LEU A 154 SHEET 1 AA5 3 GLU A 198 TRP A 199 0 SHEET 2 AA5 3 TYR B 129 ARG B 130 1 O TYR B 129 N TRP A 199 SHEET 3 AA5 3 HIS B 146 ASN B 147 -1 O HIS B 146 N ARG B 130 SHEET 1 AA6 9 LYS B 49 VAL B 56 0 SHEET 2 AA6 9 TRP B 59 LEU B 66 -1 O GLN B 63 N GLN B 52 SHEET 3 AA6 9 TYR B 69 ARG B 75 -1 O VAL B 73 N TRP B 62 SHEET 4 AA6 9 ILE B 31 GLY B 35 1 N ILE B 33 O VAL B 72 SHEET 5 AA6 9 LEU B 98 GLY B 107 1 O ILE B 100 N LEU B 32 SHEET 6 AA6 9 THR B 215 GLU B 219 -1 O GLU B 218 N GLY B 106 SHEET 7 AA6 9 VAL B 188 THR B 195 1 N ILE B 192 O ALA B 216 SHEET 8 AA6 9 ILE B 117 ASN B 125 1 N ILE B 119 O VAL B 189 SHEET 9 AA6 9 PHE B 166 ALA B 167 -1 O PHE B 166 N SER B 123 SHEET 1 AA7 8 LYS B 49 VAL B 56 0 SHEET 2 AA7 8 TRP B 59 LEU B 66 -1 O GLN B 63 N GLN B 52 SHEET 3 AA7 8 TYR B 69 ARG B 75 -1 O VAL B 73 N TRP B 62 SHEET 4 AA7 8 ILE B 31 GLY B 35 1 N ILE B 33 O VAL B 72 SHEET 5 AA7 8 LEU B 98 GLY B 107 1 O ILE B 100 N LEU B 32 SHEET 6 AA7 8 PHE B 236 ASN B 244 1 O ILE B 239 N ASN B 101 SHEET 7 AA7 8 ILE B 117 ASN B 125 -1 N VAL B 118 O ARG B 240 SHEET 8 AA7 8 PHE B 166 ALA B 167 -1 O PHE B 166 N SER B 123 SHEET 1 AA8 2 LEU B 154 ASP B 156 0 SHEET 2 AA8 2 LYS B 159 VAL B 161 -1 O VAL B 161 N LEU B 154 SITE 1 AC1 19 ALA A 36 MET A 37 THR A 104 ALA A 105 SITE 2 AC1 19 GLY A 106 GLU A 198 TRP A 199 GLU A 218 SITE 3 AC1 19 GLU A 219 MET A 220 GLU A 221 ARG A 240 SITE 4 AC1 19 ASN A 244 HOH A 468 HOH A 495 HOH A 538 SITE 5 AC1 19 HOH A 558 HOH A 585 ARG B 153 SITE 1 AC2 7 LYS A 122 SER A 165 ARG A 184 TYR A 213 SITE 2 AC2 7 HOH A 401 HOH A 440 HOH A 569 SITE 1 AC3 19 ARG A 153 ALA B 36 MET B 37 THR B 104 SITE 2 AC3 19 ALA B 105 GLY B 106 GLU B 198 TRP B 199 SITE 3 AC3 19 GLU B 218 GLU B 219 MET B 220 GLU B 221 SITE 4 AC3 19 ARG B 240 ASN B 244 HOH B 493 HOH B 508 SITE 5 AC3 19 HOH B 619 HOH B 632 HOH B 644 SITE 1 AC4 7 LYS B 122 PHE B 124 TYR B 213 HOH B 446 SITE 2 AC4 7 HOH B 528 HOH B 567 HOH B 598 CRYST1 103.085 103.085 118.923 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009701 0.005601 0.000000 0.00000 SCALE2 0.000000 0.011201 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008409 0.00000