HEADER TRANSPORT PROTEIN 25-MAY-15 5BN2 TITLE ROOM TEMPERATURE STRUCTURE OF PICHIA PASTORIS AQUAPORIN AT 1.3 A COMPND MOL_ID: 1; COMPND 2 MOLECULE: AQY1 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AQUAPORIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KOMAGATAELLA PASTORIS; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4922; SOURCE 5 GENE: AQY1, PP7435_CHR3-0430; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: YEAST; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPICZB KEYWDS AQUAPORIN, TRANSMEMBRANE CHANNEL, WATER TRANSPORT, ROOM TEMPERATURE KEYWDS 2 CRYSTALLOGRAPHY, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.FISCHER,U.KOSINSKA ERIKSSON,K.HEDFALK,R.NEUTZE REVDAT 4 10-JAN-24 5BN2 1 REMARK HETSYN REVDAT 3 29-JUL-20 5BN2 1 COMPND REMARK HETNAM SITE REVDAT 2 17-JAN-18 5BN2 1 REMARK REVDAT 1 29-JUN-16 5BN2 0 JRNL AUTH G.FISCHER,C.APONTE SANTAMARIA,U.KOSINSKA ERIKSSON,K.HEDFALK, JRNL AUTH 2 B.DEGROOT,R.NEUTZE JRNL TITL ROOM TEMPERATURE STRUCTURE OF PICHIA PASTORIS AQUAPORIN AT JRNL TITL 2 1.3 A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 79248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.116 REMARK 3 R VALUE (WORKING SET) : 0.114 REMARK 3 FREE R VALUE : 0.143 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4176 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5863 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.2210 REMARK 3 BIN FREE R VALUE SET COUNT : 321 REMARK 3 BIN FREE R VALUE : 0.2630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1983 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 98 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : 0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.029 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.031 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.023 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.259 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.982 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.975 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2136 ; 0.022 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2010 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2933 ; 1.900 ; 1.937 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4593 ; 0.974 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 275 ; 4.952 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;34.412 ;22.025 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 287 ;11.607 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;17.949 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 321 ; 0.139 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2469 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 548 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1079 ; 2.332 ; 1.427 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1078 ; 2.270 ; 1.424 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1361 ; 2.576 ; 2.152 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1362 ; 2.598 ; 2.154 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1057 ; 5.498 ; 1.869 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1057 ; 5.497 ; 1.869 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1573 ; 6.282 ; 2.670 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2622 ; 5.379 ;13.434 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2622 ; 5.379 ;13.435 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4146 ; 6.504 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 40 ;44.168 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4130 ;16.016 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5BN2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209940. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-5 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9083 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 83459 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 34.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : 0.07000 REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.49900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3ZOJ REMARK 200 REMARK 200 REMARK: CUBE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% PEG600, 100 MM TRIS (PH=8.0), 200 REMARK 280 MM CACL2, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 46.24350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.24350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 40.59550 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 46.24350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.24350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.59550 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 46.24350 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 46.24350 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 40.59550 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 46.24350 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 46.24350 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 40.59550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 22050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -246.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 303 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 498 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ASP A 3 REMARK 465 ILE A 4 REMARK 465 GLU A 5 REMARK 465 ASN A 6 REMARK 465 GLN A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 ASP A 10 REMARK 465 GLY A 11 REMARK 465 GLN A 12 REMARK 465 ALA A 13 REMARK 465 GLY A 274 REMARK 465 GLN A 275 REMARK 465 ASP A 276 REMARK 465 SER A 277 REMARK 465 ASP A 278 REMARK 465 ALA A 279 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 14 CG CD OE1 OE2 REMARK 480 GLU A 74 CG CD OE1 OE2 REMARK 480 ARG A 236 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H LEU A 162 HH TYR A 241 1.17 REMARK 500 HD1 HIS A 194 H ALA A 196 1.35 REMARK 500 O HOH A 421 O HOH A 425 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 38 CB SER A 38 OG -0.145 REMARK 500 ARG A 236 CG ARG A 236 CD -0.190 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 31 CB - CG - CD1 ANGL. DEV. = 3.7 DEGREES REMARK 500 PHE A 90 CB - CG - CD1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 105 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 MET A 151 CG - SD - CE ANGL. DEV. = -11.5 DEGREES REMARK 500 ARG A 168 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 168 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 112 115.66 -172.24 REMARK 500 ALA A 221 87.52 67.18 REMARK 500 ASN A 224 100.05 179.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 BOG A 301 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 149 O REMARK 620 2 THR A 152 O 82.1 REMARK 620 3 GLY A 154 O 165.1 106.0 REMARK 620 4 HOH A 415 O 89.0 171.0 82.6 REMARK 620 5 HOH A 417 O 91.3 90.6 76.3 89.0 REMARK 620 6 HOH A 488 O 95.2 92.3 96.9 89.2 173.2 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZOJ RELATED DB: PDB REMARK 900 ULTRA-HIGH RESOLUTION STRUCTURE AT 100 K REMARK 900 RELATED ID: 2W2E RELATED DB: PDB REMARK 900 RELATED ID: 1W2P RELATED DB: PDB DBREF 5BN2 A 1 279 UNP F2QVG4 F2QVG4_PICP7 1 279 SEQRES 1 A 279 MET PRO ASP ILE GLU ASN GLN ALA ALA ASP GLY GLN ALA SEQRES 2 A 279 GLU ILE LYS PRO GLU ASP ALA PRO TYR ILE THR ASN ALA SEQRES 3 A 279 TYR LYS PRO ALA TYR ALA ARG TRP GLY PHE GLY SER ASP SEQRES 4 A 279 SER VAL ARG ASN HIS PHE ILE ALA MET SER GLY GLU PHE SEQRES 5 A 279 VAL GLY THR PHE LEU PHE LEU TRP SER ALA PHE VAL ILE SEQRES 6 A 279 ALA GLN ILE ALA ASN GLN ALA PRO GLU THR PRO ASP GLY SEQRES 7 A 279 GLY SER ASN PRO ALA GLN LEU ILE MET ILE SER PHE GLY SEQRES 8 A 279 PHE GLY PHE GLY VAL MET VAL GLY VAL PHE ILE THR TYR SEQRES 9 A 279 ARG VAL SER GLY GLY ASN LEU ASN PRO ALA VAL THR LEU SEQRES 10 A 279 ALA LEU VAL LEU ALA ARG ALA ILE PRO PRO PHE ARG GLY SEQRES 11 A 279 ILE LEU MET ALA PHE THR GLN ILE VAL ALA GLY MET ALA SEQRES 12 A 279 ALA ALA GLY ALA ALA SER ALA MET THR PRO GLY GLU ILE SEQRES 13 A 279 ALA PHE ALA ASN ALA LEU GLY GLY GLY ALA SER ARG THR SEQRES 14 A 279 ARG GLY LEU PHE LEU GLU ALA PHE GLY THR ALA ILE LEU SEQRES 15 A 279 CYS LEU THR VAL LEU MET LEU ALA VAL GLU LYS HIS ARG SEQRES 16 A 279 ALA THR TRP PHE ALA PRO PHE VAL ILE GLY ILE ALA LEU SEQRES 17 A 279 LEU ILE ALA HIS LEU ILE CYS ILE TYR TYR THR GLY ALA SEQRES 18 A 279 GLY LEU ASN PRO ALA ARG SER PHE GLY PRO ALA VAL ALA SEQRES 19 A 279 ALA ARG SER PHE PRO ASN TYR HIS TRP ILE TYR TRP LEU SEQRES 20 A 279 GLY PRO ILE LEU GLY ALA PHE LEU ALA TYR SER ILE TRP SEQRES 21 A 279 GLN MET TRP LYS TRP LEU ASN TYR GLN THR THR ASN PRO SEQRES 22 A 279 GLY GLN ASP SER ASP ALA HET BOG A 301 35 HET CL A 302 1 HET CL A 303 1 HET CA A 304 1 HETNAM BOG OCTYL BETA-D-GLUCOPYRANOSIDE HETNAM CL CHLORIDE ION HETNAM CA CALCIUM ION HETSYN BOG BETA-OCTYLGLUCOSIDE; OCTYL BETA-D-GLUCOSIDE; OCTYL D- HETSYN 2 BOG GLUCOSIDE; OCTYL GLUCOSIDE FORMUL 2 BOG C14 H28 O6 FORMUL 3 CL 2(CL 1-) FORMUL 5 CA CA 2+ FORMUL 6 HOH *98(H2 O) HELIX 1 AA1 ASP A 19 ASN A 25 1 7 HELIX 2 AA2 PRO A 29 TRP A 34 5 6 HELIX 3 AA3 SER A 40 ASN A 70 1 31 HELIX 4 AA4 THR A 75 GLY A 79 5 5 HELIX 5 AA5 ASN A 81 TYR A 104 1 24 HELIX 6 AA6 ASN A 112 ALA A 122 1 11 HELIX 7 AA7 PRO A 126 THR A 152 1 27 HELIX 8 AA8 SER A 167 ALA A 190 1 24 HELIX 9 AA9 ALA A 196 TRP A 198 5 3 HELIX 10 AB1 PHE A 199 GLY A 220 1 22 HELIX 11 AB2 ASN A 224 ARG A 236 1 13 HELIX 12 AB3 TRP A 243 LEU A 266 1 24 LINK O SER A 149 CA CA A 304 1555 1555 2.39 LINK O THR A 152 CA CA A 304 1555 1555 2.30 LINK O GLY A 154 CA CA A 304 1555 1555 2.39 LINK CA CA A 304 O HOH A 415 1555 1555 2.34 LINK CA CA A 304 O HOH A 417 1555 1555 2.41 LINK CA CA A 304 O HOH A 488 1555 1555 2.22 CRYST1 92.487 92.487 81.191 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010812 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012317 0.00000