HEADER ISOMERASE/DNA/RNA 01-JUN-15 5BS3 TITLE CRYSTAL STRUCTURE OF S.A. GYRASE IN COMPLEX WITH COMPOUND 7 CAVEAT 5BS3 IN CHAIN B AND D, RESIDUE GLY 545 AND TYR 580 ARE NOT CAVEAT 2 5BS3 PROPERLY LINKED BECAUSE THE DISTANCE BETWEEN C AND N OF THE CAVEAT 3 5BS3 PEPTIDIC BOND IS BEYOND 3 ANGSTROMS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA GYRASE SUBUNIT A AND B; COMPND 3 CHAIN: B, D; COMPND 4 EC: 5.99.1.3; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA/RNA (5'-R(P*AP*GP*CP*CP*G)-D(P*T)- COMPND 8 R(P*AP*GP*GP*GP*CP*CP*C)-D(P*T)-R(P*AP*CP*GP*GP*C)-D(P*T)-3'); COMPND 9 CHAIN: E, F; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: GYRB, GYRA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS ED98; SOURCE 10 ORGANISM_TAXID: 681288 KEYWDS GYRASE, ANTIBACTERIAL, SAR, COMPLEX, ISOMERASE-DNA-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.LU,S.PATEL,S.SOISSON REVDAT 2 06-MAR-24 5BS3 1 SOURCE KEYWDS JRNL REMARK REVDAT 2 2 1 LINK REVDAT 1 17-JUN-15 5BS3 0 JRNL AUTH S.B.SINGH,D.E.KAELIN,J.WU,L.MIESEL,C.M.TAN,T.BLACK, JRNL AUTH 2 R.NARGUND,P.T.MEINKE,D.B.OLSEN,A.LAGRUTTA,J.LU,S.PATEL, JRNL AUTH 3 K.W.RICKERT,R.F.SMITH,S.SOISSON,E.SHERER,L.A.JOYCE,C.WEI, JRNL AUTH 4 X.PENG,X.WANG,H.FUKUDA,R.KISHII,M.TAKEI,H.TAKANO, JRNL AUTH 5 M.SHIBASAKI,M.YAJIMA,A.NISHIMURA,T.SHIBATA,Y.FUKUDA JRNL TITL TRICYCLIC 1,5-NAPHTHYRIDINONE OXABICYCLOOCTANE-LINKED NOVEL JRNL TITL 2 BACTERIAL TOPOISOMERASE INHIBITORS AS BROAD-SPECTRUM JRNL TITL 3 ANTIBACTERIAL AGENTS-SAR OF LEFT-HAND-SIDE MOIETY (PART-2). JRNL REF BIOORG.MED.CHEM.LETT. V. 25 1831 2015 JRNL REFN ESSN 1464-3405 JRNL PMID 25851938 JRNL DOI 10.1016/J.BMCL.2015.03.044 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.9.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 58374 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2952 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.72 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4296 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1966 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4110 REMARK 3 BIN R VALUE (WORKING SET) : 0.1936 REMARK 3 BIN FREE R VALUE : 0.2679 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.33 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 186 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10526 REMARK 3 NUCLEIC ACID ATOMS : 800 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 137 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 62.75 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.66390 REMARK 3 B22 (A**2) : 0.66390 REMARK 3 B33 (A**2) : -1.32780 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.275 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.390 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.241 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.436 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.250 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.902 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 11641 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 15886 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 4420 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 308 ; 8.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1626 ; 8.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 11641 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1546 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 13177 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.20 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 1.93 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.73 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5BS3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210393. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08B1-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58653 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 411.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.49400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15.33 % PEG MME 5K, 50 MM BIS-TRIS PH REMARK 280 6.0, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 137.02267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 274.04533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 205.53400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 342.55667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 68.51133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -118.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO B 409 REMARK 465 ASP B 410 REMARK 465 VAL B 411 REMARK 465 ALA B 412 REMARK 465 SER B 413 REMARK 465 LEU B 414 REMARK 465 PRO B 415 REMARK 465 GLY B 416 REMARK 465 ALA B 997 REMARK 465 ASN B 998 REMARK 465 LEU B 999 REMARK 465 ASP B 1000 REMARK 465 PHE B 1001 REMARK 465 ALA B 1002 REMARK 465 GLU B 1003 REMARK 465 LEU B 1004 REMARK 465 PRO B 1005 REMARK 465 GLN B 1006 REMARK 465 SER B 1007 REMARK 465 ARG B 1008 REMARK 465 ILE B 1009 REMARK 465 GLY B 1491 REMARK 465 PRO D 409 REMARK 465 ASP D 410 REMARK 465 VAL D 411 REMARK 465 ALA D 412 REMARK 465 SER D 413 REMARK 465 LEU D 414 REMARK 465 PRO D 415 REMARK 465 GLY D 416 REMARK 465 ALA D 997 REMARK 465 ASN D 998 REMARK 465 LEU D 999 REMARK 465 ASP D 1000 REMARK 465 PHE D 1001 REMARK 465 ALA D 1002 REMARK 465 GLU D 1003 REMARK 465 LEU D 1004 REMARK 465 PRO D 1005 REMARK 465 GLN D 1006 REMARK 465 SER D 1007 REMARK 465 ARG D 1008 REMARK 465 ILE D 1009 REMARK 465 GLY D 1491 REMARK 465 DT F 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 417 CG CD CE NZ REMARK 470 LYS B 424 CG CD CE NZ REMARK 470 LYS B 581 CG CD CE NZ REMARK 470 LYS B1276 CG CD CE NZ REMARK 470 ARG B1282 CG CD NE CZ NH1 NH2 REMARK 470 LYS B1323 CG CD CE NZ REMARK 470 GLU B1393 CG CD OE1 OE2 REMARK 470 LYS B1405 CG CD CE NZ REMARK 470 GLU B1409 CG CD OE1 OE2 REMARK 470 LEU B1436 CG CD1 CD2 REMARK 470 ASP B1439 CG OD1 OD2 REMARK 470 GLU B1447 CG CD OE1 OE2 REMARK 470 LEU B1490 CG CD1 CD2 REMARK 470 LYS D 417 CG CD CE NZ REMARK 470 LYS D 424 CG CD CE NZ REMARK 470 ARG D 468 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 497 CG CD CE NZ REMARK 470 LYS D 581 CG CD CE NZ REMARK 470 LYS D 607 CG CD CE NZ REMARK 470 GLU D 609 CG CD OE1 OE2 REMARK 470 GLU D 619 CG CD OE1 OE2 REMARK 470 GLU D1011 CG CD OE1 OE2 REMARK 470 LYS D1227 CG CD CE NZ REMARK 470 LYS D1284 CG CD CE NZ REMARK 470 LEU D1490 CG CD1 CD2 REMARK 470 A E 1 O2' REMARK 470 G E 2 O2' REMARK 470 C E 3 O2' REMARK 470 C E 4 O2' REMARK 470 G E 5 O2' REMARK 470 A E 7 O2' REMARK 470 G E 8 O2' REMARK 470 G E 9 O2' REMARK 470 G E 10 O2' REMARK 470 C E 11 O2' REMARK 470 C E 12 O2' REMARK 470 C E 13 O2' REMARK 470 A E 15 O2' REMARK 470 C E 16 O2' REMARK 470 G E 17 O2' REMARK 470 G E 18 O2' REMARK 470 C E 19 O2' REMARK 470 A F 1 O2' REMARK 470 G F 2 O2' REMARK 470 C F 3 O2' REMARK 470 C F 4 O2' REMARK 470 G F 5 O2' REMARK 470 A F 7 O2' REMARK 470 G F 8 O2' REMARK 470 G F 9 O2' REMARK 470 G F 10 O2' REMARK 470 C F 11 O2' REMARK 470 C F 12 O2' REMARK 470 C F 13 O2' REMARK 470 A F 15 O2' REMARK 470 C F 16 O2' REMARK 470 G F 17 O2' REMARK 470 G F 18 O2' REMARK 470 C F 19 O2' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 A E 1 OP1 - P - OP2 ANGL. DEV. = -11.0 DEGREES REMARK 500 C E 4 O4' - C1' - N1 ANGL. DEV. = 5.1 DEGREES REMARK 500 DT E 6 O4' - C1' - N1 ANGL. DEV. = 3.7 DEGREES REMARK 500 DT E 6 N3 - C4 - O4 ANGL. DEV. = -4.0 DEGREES REMARK 500 A E 7 N1 - C2 - N3 ANGL. DEV. = -3.1 DEGREES REMARK 500 G E 10 C3' - O3' - P ANGL. DEV. = 8.7 DEGREES REMARK 500 C E 13 C1' - O4' - C4' ANGL. DEV. = -4.8 DEGREES REMARK 500 C E 13 C4' - C3' - C2' ANGL. DEV. = -7.3 DEGREES REMARK 500 DT E 14 O4' - C4' - C3' ANGL. DEV. = -2.7 DEGREES REMARK 500 DT E 14 C4' - C3' - C2' ANGL. DEV. = -4.5 DEGREES REMARK 500 DT E 14 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DT E 14 C4 - C5 - C7 ANGL. DEV. = 4.0 DEGREES REMARK 500 C E 16 C1' - O4' - C4' ANGL. DEV. = -4.9 DEGREES REMARK 500 C E 19 O4' - C1' - N1 ANGL. DEV. = 5.1 DEGREES REMARK 500 DT E 20 O4' - C1' - N1 ANGL. DEV. = 3.6 DEGREES REMARK 500 A F 1 OP1 - P - OP2 ANGL. DEV. = -9.0 DEGREES REMARK 500 G F 2 O4' - C1' - N9 ANGL. DEV. = 6.1 DEGREES REMARK 500 DT F 6 O4' - C1' - N1 ANGL. DEV. = 5.4 DEGREES REMARK 500 G F 10 C3' - O3' - P ANGL. DEV. = 7.3 DEGREES REMARK 500 C F 11 C3' - O3' - P ANGL. DEV. = 8.0 DEGREES REMARK 500 DT F 14 C4' - C3' - C2' ANGL. DEV. = -4.5 DEGREES REMARK 500 DT F 14 O4' - C1' - N1 ANGL. DEV. = 5.4 DEGREES REMARK 500 C F 16 C1' - O4' - C4' ANGL. DEV. = -5.2 DEGREES REMARK 500 G F 17 O4' - C1' - N9 ANGL. DEV. = -6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 419 75.91 -102.58 REMARK 500 LEU B 457 -158.56 -90.21 REMARK 500 GLU B 609 -97.39 -96.13 REMARK 500 ARG B1033 -74.40 -158.77 REMARK 500 MET B1058 51.13 -97.76 REMARK 500 ALA B1162 76.91 45.85 REMARK 500 ALA B1176 -140.36 -105.88 REMARK 500 ALA B1221 -120.40 51.95 REMARK 500 GLN B1267 -1.23 70.79 REMARK 500 LYS B1284 26.11 45.57 REMARK 500 ASP B1311 -9.51 81.30 REMARK 500 ASN B1334 81.93 -151.63 REMARK 500 LEU B1436 47.50 -94.25 REMARK 500 GLU D 609 -94.97 -85.28 REMARK 500 ARG D1033 -68.02 -159.14 REMARK 500 ASN D1149 -176.52 -69.77 REMARK 500 ALA D1176 -142.47 -108.86 REMARK 500 ALA D1221 -114.08 54.13 REMARK 500 ASP D1311 -2.14 72.75 REMARK 500 PRO D1326 0.03 -60.98 REMARK 500 MET D1335 74.94 -68.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 435 OE2 REMARK 620 2 ASP B 508 OD2 100.0 REMARK 620 3 HOH B1602 O 88.3 124.4 REMARK 620 4 HOH B1606 O 162.5 83.8 75.6 REMARK 620 5 G E 9 OP1 105.7 90.5 139.9 91.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D1501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 435 OE2 REMARK 620 2 ASP D 508 OD2 106.7 REMARK 620 3 HOH D1605 O 162.5 87.3 REMARK 620 4 HOH D1618 O 79.6 118.0 84.7 REMARK 620 5 G F 8 O3' 73.3 146.7 100.9 95.1 REMARK 620 6 G F 9 OP1 103.6 92.3 85.8 147.7 56.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN D 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 1502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue WCP F 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 F 102 DBREF 5BS3 B 410 543 UNP P0A0K8 GYRB_STAAU 410 543 DBREF 5BS3 B 580 1001 UNP P0A0K8 GYRB_STAAU 580 644 DBREF 5BS3 B 1002 1491 UNP P20831 GYRA_STAAU 2 491 DBREF 5BS3 D 410 543 UNP P0A0K8 GYRB_STAAU 410 543 DBREF 5BS3 D 580 1001 UNP P0A0K8 GYRB_STAAU 580 644 DBREF 5BS3 D 1002 1491 UNP P20831 GYRA_STAAU 2 491 DBREF 5BS3 E 1 20 PDB 5BS3 5BS3 1 20 DBREF 5BS3 F 1 20 PDB 5BS3 5BS3 1 20 SEQADV 5BS3 PRO B 409 UNP P0A0K8 EXPRESSION TAG SEQADV 5BS3 THR B 544 UNP P0A0K8 LINKER SEQADV 5BS3 GLY B 545 UNP P0A0K8 LINKER SEQADV 5BS3 PHE B 1123 UNP P20831 TYR 123 ENGINEERED MUTATION SEQADV 5BS3 THR B 1457 UNP P20831 ALA 457 ENGINEERED MUTATION SEQADV 5BS3 PRO D 409 UNP P0A0K8 EXPRESSION TAG SEQADV 5BS3 THR D 544 UNP P0A0K8 LINKER SEQADV 5BS3 GLY D 545 UNP P0A0K8 LINKER SEQADV 5BS3 PHE D 1123 UNP P20831 TYR 123 ENGINEERED MUTATION SEQADV 5BS3 THR D 1457 UNP P20831 ALA 457 ENGINEERED MUTATION SEQRES 1 B 692 PRO ASP VAL ALA SER LEU PRO GLY LYS LEU ALA ASP CYS SEQRES 2 B 692 SER SER LYS SER PRO GLU GLU CYS GLU ILE PHE LEU VAL SEQRES 3 B 692 GLU GLY ASP SER ALA GLY GLY SER THR LYS SER GLY ARG SEQRES 4 B 692 ASP SER ARG THR GLN ALA ILE LEU PRO LEU ARG GLY LYS SEQRES 5 B 692 ILE LEU ASN VAL GLU LYS ALA ARG LEU ASP ARG ILE LEU SEQRES 6 B 692 ASN ASN ASN GLU ILE ARG GLN MET ILE THR ALA PHE GLY SEQRES 7 B 692 THR GLY ILE GLY GLY ASP PHE ASP LEU ALA LYS ALA ARG SEQRES 8 B 692 TYR HIS LYS ILE VAL ILE MET THR ASP ALA ASP VAL ASP SEQRES 9 B 692 GLY ALA HIS ILE ARG THR LEU LEU LEU THR PHE PHE TYR SEQRES 10 B 692 ARG PHE MET ARG PRO LEU ILE GLU ALA GLY TYR VAL TYR SEQRES 11 B 692 ILE ALA GLN PRO PRO THR GLY TYR LYS GLY LEU GLY GLU SEQRES 12 B 692 MET ASN ALA ASP GLN LEU TRP GLU THR THR MET ASN PRO SEQRES 13 B 692 GLU HIS ARG ALA LEU LEU GLN VAL LYS LEU GLU ASP ALA SEQRES 14 B 692 ILE GLU ALA ASP GLN THR PHE GLU MET LEU MET GLY ASP SEQRES 15 B 692 VAL VAL GLU ASN ARG ARG GLN PHE ILE GLU ASP ASN ALA SEQRES 16 B 692 VAL TYR ALA ASN LEU ASP PHE ALA GLU LEU PRO GLN SER SEQRES 17 B 692 ARG ILE ASN GLU ARG ASN ILE THR SER GLU MET ARG GLU SEQRES 18 B 692 SER PHE LEU ASP TYR ALA MET SER VAL ILE VAL ALA ARG SEQRES 19 B 692 ALA LEU PRO ASP VAL ARG ASP GLY LEU LYS PRO VAL HIS SEQRES 20 B 692 ARG ARG ILE LEU TYR GLY LEU ASN GLU GLN GLY MET THR SEQRES 21 B 692 PRO ASP LYS SER TYR LYS LYS SER ALA ARG ILE VAL GLY SEQRES 22 B 692 ASP VAL MET GLY LYS TYR HIS PRO HIS GLY ASP SER SER SEQRES 23 B 692 ILE TYR GLU ALA MET VAL ARG MET ALA GLN ASP PHE SER SEQRES 24 B 692 TYR ARG TYR PRO LEU VAL ASP GLY GLN GLY ASN PHE GLY SEQRES 25 B 692 SER MET ASP GLY ASP GLY ALA ALA ALA MET ARG PHE THR SEQRES 26 B 692 GLU ALA ARG MET THR LYS ILE THR LEU GLU LEU LEU ARG SEQRES 27 B 692 ASP ILE ASN LYS ASP THR ILE ASP PHE ILE ASP ASN TYR SEQRES 28 B 692 ASP GLY ASN GLU ARG GLU PRO SER VAL LEU PRO ALA ARG SEQRES 29 B 692 PHE PRO ASN LEU LEU ALA ASN GLY ALA SER GLY ILE ALA SEQRES 30 B 692 VAL GLY MET ALA THR ASN ILE PRO PRO HIS ASN LEU THR SEQRES 31 B 692 GLU LEU ILE ASN GLY VAL LEU SER LEU SER LYS ASN PRO SEQRES 32 B 692 ASP ILE SER ILE ALA GLU LEU MET GLU ASP ILE GLU GLY SEQRES 33 B 692 PRO ASP PHE PRO THR ALA GLY LEU ILE LEU GLY LYS SER SEQRES 34 B 692 GLY ILE ARG ARG ALA TYR GLU THR GLY ARG GLY SER ILE SEQRES 35 B 692 GLN MET ARG SER ARG ALA VAL ILE GLU GLU ARG GLY GLY SEQRES 36 B 692 GLY ARG GLN ARG ILE VAL VAL THR GLU ILE PRO PHE GLN SEQRES 37 B 692 VAL ASN LYS ALA ARG MET ILE GLU LYS ILE ALA GLU LEU SEQRES 38 B 692 VAL ARG ASP LYS LYS ILE ASP GLY ILE THR ASP LEU ARG SEQRES 39 B 692 ASP GLU THR SER LEU ARG THR GLY VAL ARG VAL VAL ILE SEQRES 40 B 692 ASP VAL ARG LYS ASP ALA ASN ALA SER VAL ILE LEU ASN SEQRES 41 B 692 ASN LEU TYR LYS GLN THR PRO LEU GLN THR SER PHE GLY SEQRES 42 B 692 VAL ASN MET ILE ALA LEU VAL ASN GLY ARG PRO LYS LEU SEQRES 43 B 692 ILE ASN LEU LYS GLU ALA LEU VAL HIS TYR LEU GLU HIS SEQRES 44 B 692 GLN LYS THR VAL VAL ARG ARG ARG THR GLN TYR ASN LEU SEQRES 45 B 692 ARG LYS ALA LYS ASP ARG ALA HIS ILE LEU GLU GLY LEU SEQRES 46 B 692 ARG ILE ALA LEU ASP HIS ILE ASP GLU ILE ILE SER THR SEQRES 47 B 692 ILE ARG GLU SER ASP THR ASP LYS VAL ALA MET GLU SER SEQRES 48 B 692 LEU GLN GLN ARG PHE LYS LEU SER GLU LYS GLN ALA GLN SEQRES 49 B 692 ALA ILE LEU ASP MET ARG LEU ARG ARG LEU THR GLY LEU SEQRES 50 B 692 GLU ARG ASP LYS ILE GLU ALA GLU TYR ASN GLU LEU LEU SEQRES 51 B 692 ASN TYR ILE SER GLU LEU GLU THR ILE LEU ALA ASP GLU SEQRES 52 B 692 GLU VAL LEU LEU GLN LEU VAL ARG ASP GLU LEU THR GLU SEQRES 53 B 692 ILE ARG ASP ARG PHE GLY ASP ASP ARG ARG THR GLU ILE SEQRES 54 B 692 GLN LEU GLY SEQRES 1 D 692 PRO ASP VAL ALA SER LEU PRO GLY LYS LEU ALA ASP CYS SEQRES 2 D 692 SER SER LYS SER PRO GLU GLU CYS GLU ILE PHE LEU VAL SEQRES 3 D 692 GLU GLY ASP SER ALA GLY GLY SER THR LYS SER GLY ARG SEQRES 4 D 692 ASP SER ARG THR GLN ALA ILE LEU PRO LEU ARG GLY LYS SEQRES 5 D 692 ILE LEU ASN VAL GLU LYS ALA ARG LEU ASP ARG ILE LEU SEQRES 6 D 692 ASN ASN ASN GLU ILE ARG GLN MET ILE THR ALA PHE GLY SEQRES 7 D 692 THR GLY ILE GLY GLY ASP PHE ASP LEU ALA LYS ALA ARG SEQRES 8 D 692 TYR HIS LYS ILE VAL ILE MET THR ASP ALA ASP VAL ASP SEQRES 9 D 692 GLY ALA HIS ILE ARG THR LEU LEU LEU THR PHE PHE TYR SEQRES 10 D 692 ARG PHE MET ARG PRO LEU ILE GLU ALA GLY TYR VAL TYR SEQRES 11 D 692 ILE ALA GLN PRO PRO THR GLY TYR LYS GLY LEU GLY GLU SEQRES 12 D 692 MET ASN ALA ASP GLN LEU TRP GLU THR THR MET ASN PRO SEQRES 13 D 692 GLU HIS ARG ALA LEU LEU GLN VAL LYS LEU GLU ASP ALA SEQRES 14 D 692 ILE GLU ALA ASP GLN THR PHE GLU MET LEU MET GLY ASP SEQRES 15 D 692 VAL VAL GLU ASN ARG ARG GLN PHE ILE GLU ASP ASN ALA SEQRES 16 D 692 VAL TYR ALA ASN LEU ASP PHE ALA GLU LEU PRO GLN SER SEQRES 17 D 692 ARG ILE ASN GLU ARG ASN ILE THR SER GLU MET ARG GLU SEQRES 18 D 692 SER PHE LEU ASP TYR ALA MET SER VAL ILE VAL ALA ARG SEQRES 19 D 692 ALA LEU PRO ASP VAL ARG ASP GLY LEU LYS PRO VAL HIS SEQRES 20 D 692 ARG ARG ILE LEU TYR GLY LEU ASN GLU GLN GLY MET THR SEQRES 21 D 692 PRO ASP LYS SER TYR LYS LYS SER ALA ARG ILE VAL GLY SEQRES 22 D 692 ASP VAL MET GLY LYS TYR HIS PRO HIS GLY ASP SER SER SEQRES 23 D 692 ILE TYR GLU ALA MET VAL ARG MET ALA GLN ASP PHE SER SEQRES 24 D 692 TYR ARG TYR PRO LEU VAL ASP GLY GLN GLY ASN PHE GLY SEQRES 25 D 692 SER MET ASP GLY ASP GLY ALA ALA ALA MET ARG PHE THR SEQRES 26 D 692 GLU ALA ARG MET THR LYS ILE THR LEU GLU LEU LEU ARG SEQRES 27 D 692 ASP ILE ASN LYS ASP THR ILE ASP PHE ILE ASP ASN TYR SEQRES 28 D 692 ASP GLY ASN GLU ARG GLU PRO SER VAL LEU PRO ALA ARG SEQRES 29 D 692 PHE PRO ASN LEU LEU ALA ASN GLY ALA SER GLY ILE ALA SEQRES 30 D 692 VAL GLY MET ALA THR ASN ILE PRO PRO HIS ASN LEU THR SEQRES 31 D 692 GLU LEU ILE ASN GLY VAL LEU SER LEU SER LYS ASN PRO SEQRES 32 D 692 ASP ILE SER ILE ALA GLU LEU MET GLU ASP ILE GLU GLY SEQRES 33 D 692 PRO ASP PHE PRO THR ALA GLY LEU ILE LEU GLY LYS SER SEQRES 34 D 692 GLY ILE ARG ARG ALA TYR GLU THR GLY ARG GLY SER ILE SEQRES 35 D 692 GLN MET ARG SER ARG ALA VAL ILE GLU GLU ARG GLY GLY SEQRES 36 D 692 GLY ARG GLN ARG ILE VAL VAL THR GLU ILE PRO PHE GLN SEQRES 37 D 692 VAL ASN LYS ALA ARG MET ILE GLU LYS ILE ALA GLU LEU SEQRES 38 D 692 VAL ARG ASP LYS LYS ILE ASP GLY ILE THR ASP LEU ARG SEQRES 39 D 692 ASP GLU THR SER LEU ARG THR GLY VAL ARG VAL VAL ILE SEQRES 40 D 692 ASP VAL ARG LYS ASP ALA ASN ALA SER VAL ILE LEU ASN SEQRES 41 D 692 ASN LEU TYR LYS GLN THR PRO LEU GLN THR SER PHE GLY SEQRES 42 D 692 VAL ASN MET ILE ALA LEU VAL ASN GLY ARG PRO LYS LEU SEQRES 43 D 692 ILE ASN LEU LYS GLU ALA LEU VAL HIS TYR LEU GLU HIS SEQRES 44 D 692 GLN LYS THR VAL VAL ARG ARG ARG THR GLN TYR ASN LEU SEQRES 45 D 692 ARG LYS ALA LYS ASP ARG ALA HIS ILE LEU GLU GLY LEU SEQRES 46 D 692 ARG ILE ALA LEU ASP HIS ILE ASP GLU ILE ILE SER THR SEQRES 47 D 692 ILE ARG GLU SER ASP THR ASP LYS VAL ALA MET GLU SER SEQRES 48 D 692 LEU GLN GLN ARG PHE LYS LEU SER GLU LYS GLN ALA GLN SEQRES 49 D 692 ALA ILE LEU ASP MET ARG LEU ARG ARG LEU THR GLY LEU SEQRES 50 D 692 GLU ARG ASP LYS ILE GLU ALA GLU TYR ASN GLU LEU LEU SEQRES 51 D 692 ASN TYR ILE SER GLU LEU GLU THR ILE LEU ALA ASP GLU SEQRES 52 D 692 GLU VAL LEU LEU GLN LEU VAL ARG ASP GLU LEU THR GLU SEQRES 53 D 692 ILE ARG ASP ARG PHE GLY ASP ASP ARG ARG THR GLU ILE SEQRES 54 D 692 GLN LEU GLY SEQRES 1 E 20 A G C C G DT A G G G C C C SEQRES 2 E 20 DT A C G G C DT SEQRES 1 F 20 A G C C G DT A G G G C C C SEQRES 2 F 20 DT A C G G C DT HET MN B1501 1 HET MN D1501 1 HET SO4 D1502 5 HET SO4 E 101 5 HET WCP F 101 37 HET SO4 F 102 5 HETNAM MN MANGANESE (II) ION HETNAM SO4 SULFATE ION HETNAM WCP (4R)-3-FLUORO-4-HYDROXY-4-{[(1R,4R)-4-{[(3-OXO-3,4- HETNAM 2 WCP DIHYDRO-2H-PYRIDO[3,2-B][1,4]OXAZIN-6-YL) HETNAM 3 WCP METHYL]AMINO}-2-OXABICYCLO[2.2.2]OCT-1-YL]METHYL}-4,5- HETNAM 4 WCP DIHYDRO-7H-PYRROLO[3,2,1-DE][1,5]NAPHTHYRIDIN-7-ONE FORMUL 5 MN 2(MN 2+) FORMUL 7 SO4 3(O4 S 2-) FORMUL 9 WCP C26 H26 F N5 O5 FORMUL 11 HOH *137(H2 O) HELIX 1 AA1 GLY B 436 ARG B 447 1 12 HELIX 2 AA2 ARG B 468 ASN B 474 1 7 HELIX 3 AA3 ASN B 475 GLY B 486 1 12 HELIX 4 AA4 ILE B 489 PHE B 493 5 5 HELIX 5 AA5 ASP B 494 ALA B 498 5 5 HELIX 6 AA6 ASP B 510 MET B 528 1 19 HELIX 7 AA7 MET B 528 ALA B 534 1 7 HELIX 8 AA8 GLY B 582 MET B 586 5 5 HELIX 9 AA9 ASN B 587 MET B 596 1 10 HELIX 10 AB1 ASP B 610 GLY B 623 1 14 HELIX 11 AB2 VAL B 625 ALA B 637 1 13 HELIX 12 AB3 ILE B 1014 ARG B 1033 1 20 HELIX 13 AB4 LYS B 1043 GLN B 1056 1 14 HELIX 14 AB5 SER B 1067 TYR B 1078 1 12 HELIX 15 AB6 GLY B 1082 GLN B 1095 1 14 HELIX 16 AB7 THR B 1129 LEU B 1136 1 8 HELIX 17 AB8 PRO B 1165 GLY B 1171 1 7 HELIX 18 AB9 ASN B 1187 ASN B 1201 1 15 HELIX 19 AC1 SER B 1205 MET B 1210 1 6 HELIX 20 AC2 LYS B 1227 GLY B 1237 1 11 HELIX 21 AC3 ASN B 1269 ASP B 1283 1 15 HELIX 22 AC4 ASN B 1313 THR B 1325 1 13 HELIX 23 AC5 ASN B 1347 HIS B 1390 1 44 HELIX 24 AC6 HIS B 1390 GLU B 1400 1 11 HELIX 25 AC7 THR B 1403 LYS B 1416 1 14 HELIX 26 AC8 SER B 1418 MET B 1428 1 11 HELIX 27 AC9 ARG B 1429 LEU B 1436 5 8 HELIX 28 AD1 GLU B 1437 ASP B 1461 1 25 HELIX 29 AD2 ASP B 1461 GLY B 1481 1 21 HELIX 30 AD3 SER D 425 GLU D 428 5 4 HELIX 31 AD4 GLY D 436 ARG D 447 1 12 HELIX 32 AD5 ARG D 468 ASN D 474 1 7 HELIX 33 AD6 ASN D 475 GLY D 486 1 12 HELIX 34 AD7 ASP D 494 ALA D 498 5 5 HELIX 35 AD8 ASP D 510 MET D 528 1 19 HELIX 36 AD9 MET D 528 ALA D 534 1 7 HELIX 37 AE1 GLY D 582 MET D 586 5 5 HELIX 38 AE2 ASN D 587 MET D 596 1 10 HELIX 39 AE3 ASP D 610 GLY D 623 1 14 HELIX 40 AE4 VAL D 625 ALA D 637 1 13 HELIX 41 AE5 ILE D 1014 ARG D 1033 1 20 HELIX 42 AE6 LYS D 1043 GLU D 1055 1 13 HELIX 43 AE7 SER D 1067 TYR D 1078 1 12 HELIX 44 AE8 GLY D 1082 GLN D 1095 1 14 HELIX 45 AE9 THR D 1129 ARG D 1137 1 9 HELIX 46 AF1 PRO D 1165 GLY D 1171 1 7 HELIX 47 AF2 ASN D 1187 ASN D 1201 1 15 HELIX 48 AF3 SER D 1205 ILE D 1213 1 9 HELIX 49 AF4 LYS D 1227 GLY D 1237 1 11 HELIX 50 AF5 ASN D 1269 ASP D 1283 1 15 HELIX 51 AF6 ASN D 1313 THR D 1325 1 13 HELIX 52 AF7 ASN D 1347 HIS D 1390 1 44 HELIX 53 AF8 HIS D 1390 SER D 1401 1 12 HELIX 54 AF9 THR D 1403 LYS D 1416 1 14 HELIX 55 AG1 SER D 1418 MET D 1428 1 11 HELIX 56 AG2 ARG D 1429 LEU D 1433 5 5 HELIX 57 AG3 THR D 1434 ASP D 1461 1 28 HELIX 58 AG4 ASP D 1461 GLY D 1481 1 21 SHEET 1 AA1 6 GLN B 452 PRO B 456 0 SHEET 2 AA1 6 GLU B 430 VAL B 434 1 N GLU B 430 O ALA B 453 SHEET 3 AA1 6 ILE B 503 ILE B 505 1 O VAL B 504 N ILE B 431 SHEET 4 AA1 6 VAL B 537 ILE B 539 1 O TYR B 538 N ILE B 503 SHEET 5 AA1 6 LEU B 604 LYS B 607 -1 O VAL B 606 N VAL B 537 SHEET 6 AA1 6 GLU B1011 ASN B1013 1 O ARG B1012 N LYS B 607 SHEET 1 AA2 3 LYS B1065 LYS B1066 0 SHEET 2 AA2 3 GLU B1125 MET B1128 -1 O ALA B1126 N LYS B1065 SHEET 3 AA2 3 VAL B1104 GLN B1107 -1 N ASP B1105 O ARG B1127 SHEET 1 AA3 2 PHE B1146 ASP B1148 0 SHEET 2 AA3 2 ARG B1155 PRO B1157 -1 O GLU B1156 N ILE B1147 SHEET 1 AA4 2 ALA B1172 ILE B1175 0 SHEET 2 AA4 2 ALA B1180 ILE B1183 -1 O ILE B1183 N ALA B1172 SHEET 1 AA5 4 GLN B1328 ASN B1334 0 SHEET 2 AA5 4 ARG B1238 ARG B1244 -1 N GLY B1239 O VAL B1333 SHEET 3 AA5 4 LEU B1223 LEU B1225 -1 N LEU B1223 O ARG B1244 SHEET 4 AA5 4 GLU B1487 GLN B1489 1 O GLN B1489 N ILE B1224 SHEET 1 AA6 4 ARG B1246 GLY B1253 0 SHEET 2 AA6 4 ARG B1256 GLU B1263 -1 O VAL B1260 N VAL B1248 SHEET 3 AA6 4 VAL B1304 VAL B1308 -1 O VAL B1304 N VAL B1261 SHEET 4 AA6 4 ILE B1289 ASP B1294 -1 N ASP B1291 O ASP B1307 SHEET 1 AA7 2 ILE B1336 VAL B1339 0 SHEET 2 AA7 2 ARG B1342 LEU B1345 -1 O ARG B1342 N VAL B1339 SHEET 1 AA8 6 GLN D 452 PRO D 456 0 SHEET 2 AA8 6 GLU D 430 VAL D 434 1 N PHE D 432 O LEU D 455 SHEET 3 AA8 6 LYS D 502 ILE D 505 1 O VAL D 504 N ILE D 431 SHEET 4 AA8 6 VAL D 537 ILE D 539 1 O TYR D 538 N ILE D 503 SHEET 5 AA8 6 LEU D 604 LYS D 607 -1 O VAL D 606 N VAL D 537 SHEET 6 AA8 6 GLU D1011 ASN D1013 1 O ARG D1012 N GLN D 605 SHEET 1 AA9 3 LYS D1065 LYS D1066 0 SHEET 2 AA9 3 GLU D1125 MET D1128 -1 O ALA D1126 N LYS D1065 SHEET 3 AA9 3 VAL D1104 GLN D1107 -1 N GLN D1107 O GLU D1125 SHEET 1 AB1 2 PHE D1146 ASP D1148 0 SHEET 2 AB1 2 ARG D1155 PRO D1157 -1 O GLU D1156 N ILE D1147 SHEET 1 AB2 2 ALA D1172 ILE D1175 0 SHEET 2 AB2 2 ALA D1180 ILE D1183 -1 O ILE D1183 N ALA D1172 SHEET 1 AB3 4 GLN D1328 ASN D1334 0 SHEET 2 AB3 4 ARG D1238 ARG D1244 -1 N MET D1243 O THR D1329 SHEET 3 AB3 4 LEU D1223 LEU D1225 -1 N LEU D1223 O ARG D1244 SHEET 4 AB3 4 GLU D1487 GLN D1489 1 O GLN D1489 N ILE D1224 SHEET 1 AB4 4 ARG D1246 GLY D1253 0 SHEET 2 AB4 4 ARG D1256 GLU D1263 -1 O VAL D1260 N VAL D1248 SHEET 3 AB4 4 VAL D1304 VAL D1308 -1 O VAL D1304 N VAL D1261 SHEET 4 AB4 4 ILE D1289 ASP D1294 -1 N ARG D1293 O VAL D1305 SHEET 1 AB5 2 ILE D1336 VAL D1339 0 SHEET 2 AB5 2 ARG D1342 LEU D1345 -1 O ARG D1342 N VAL D1339 LINK OE2 GLU B 435 MN MN B1501 1555 1555 2.09 LINK OD2 ASP B 508 MN MN B1501 1555 1555 2.11 LINK MN MN B1501 O HOH B1602 1555 1555 2.44 LINK MN MN B1501 O HOH B1606 1555 1555 2.39 LINK MN MN B1501 OP1 G E 9 1555 1555 2.24 LINK OE2 GLU D 435 MN MN D1501 1555 1555 2.27 LINK OD2 ASP D 508 MN MN D1501 1555 1555 2.02 LINK MN MN D1501 O HOH D1605 1555 1555 2.24 LINK MN MN D1501 O HOH D1618 1555 1555 2.56 LINK MN MN D1501 O3' G F 8 1555 1555 2.79 LINK MN MN D1501 OP1 G F 9 1555 1555 2.30 SITE 1 AC1 6 GLU B 435 ASP B 508 HOH B1602 HOH B1606 SITE 2 AC1 6 G E 8 G E 9 SITE 1 AC2 6 GLU D 435 ASP D 508 HOH D1605 HOH D1618 SITE 2 AC2 6 G F 8 G F 9 SITE 1 AC3 4 ARG B1429 ARG D1429 ARG D1432 HOH D1612 SITE 1 AC4 3 G E 5 DT E 6 A F 15 SITE 1 AC5 13 ALA B1068 GLY B1072 MET B1075 ASP B1083 SITE 2 AC5 13 MET B1121 ALA D1068 GLY D1072 MET D1075 SITE 3 AC5 13 ASP D1083 G E 10 C E 11 G F 10 SITE 4 AC5 13 C F 11 SITE 1 AC6 5 DT E 14 A E 15 G F 5 DT F 6 SITE 2 AC6 5 A F 7 CRYST1 93.337 93.337 411.068 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010714 0.006186 0.000000 0.00000 SCALE2 0.000000 0.012371 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002433 0.00000